Homology
BLAST of mRNA_H-paniculata_contig110.649.1 vs. uniprot
Match:
D7G8X1_ECTSI (Histone deacetylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8X1_ECTSI)
HSP 1 Score: 224 bits (571), Expect = 9.520e-59
Identity = 114/151 (75.50%), Postives = 133/151 (88.08%), Query Frame = 1
Query: 1933 VVLDSARMLMPXXXXNLVRAKMRRRRSRVCLMHSARYQRLCGLVERNGRRDDLLYALVGACGLLGRLKVVAPARATDAHLRAYHDREYVEALRDPPSSDTKALDEFGLLDDCEVFEEMFDYCCAVAGASLHAANLLAKREADVAINWGGGR 2385
V + AR LMPXXXXN+ RAKMRRRRSRV LMHSARYQRLCGL+ER+ RRDDLLYA++GACGL RL +VAPARATD HLRAYHDR+YVEALR+ PS D K LDE+GL++DCEVFEE++++CCAVAGASLHAA+ L + +ADVAINWGGGR
Sbjct: 391 VPYNRARELMPXXXXNITRAKMRRRRSRVSLMHSARYQRLCGLLERHNRRDDLLYAMLGACGLPERLSIVAPARATDVHLRAYHDRDYVEALRNAPS-DVKTLDEYGLVEDCEVFEELYEHCCAVAGASLHAADRLCRGDADVAINWGGGR 540
BLAST of mRNA_H-paniculata_contig110.649.1 vs. uniprot
Match:
A0A6H5JLL7_9PHAE (Histone deacetylase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL7_9PHAE)
HSP 1 Score: 218 bits (556), Expect = 7.330e-57
Identity = 112/151 (74.17%), Postives = 130/151 (86.09%), Query Frame = 1
Query: 1933 VVLDSARMLMPXXXXNLVRAKMRRRRSRVCLMHSARYQRLCGLVERNGRRDDLLYALVGACGLLGRLKVVAPARATDAHLRAYHDREYVEALRDPPSSDTKALDEFGLLDDCEVFEEMFDYCCAVAGASLHAANLLAKREADVAINWGGGR 2385
V + AR LM XXXX + RAKMRRRRSRV LMHSARYQRLCGL+ER+ RRDDLLYA++GACGL RL +VAPARATD HLRAYHDR+YVEALRD PS D LDE+GL++DCEVFEE++++CCAVAGASLHAA+ L + +ADVAINWGGGR
Sbjct: 365 VPYNRARELMXXXXXXITRAKMRRRRSRVSLMHSARYQRLCGLLERHNRRDDLLYAMLGACGLPERLSIVAPARATDVHLRAYHDRDYVEALRDAPS-DVNTLDEYGLVEDCEVFEELYEHCCAVAGASLHAADRLCRGDADVAINWGGGR 514
BLAST of mRNA_H-paniculata_contig110.649.1 vs. uniprot
Match:
A0A835YMW5_9STRA (Histone deacetylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMW5_9STRA)
HSP 1 Score: 139 bits (351), Expect = 4.320e-32
Identity = 69/120 (57.50%), Postives = 89/120 (74.17%), Query Frame = 1
Query: 2026 MHSARYQRLCGLVERNGRRDDLLYALVGACGLLGRLKVVAPARATDAHLRAYHDREYVEALRDPPSSDTKALDEFGLLDDCEVFEEMFDYCCAVAGASLHAANLLAKREADVAINWGGGR 2385
MHS Y+RLCGL+ + RD LLY+L+ AC L RL V APA A +H+ A+H +E+++AL+ PP D AL+ +GL+DDCEVF +++Y CAVAGASL AA LLA+ ADVAINWGGGR
Sbjct: 1 MHSTAYERLCGLMAAHDGRDALLYSLMDACVLTQRLTVTAPALAAASHVAAFHSQEFIKALQRPPD-DEDALETYGLVDDCEVFPGLWNYACAVAGASLQAAALLARGAADVAINWGGGR 119
BLAST of mRNA_H-paniculata_contig110.649.1 vs. uniprot
Match:
A0A409XIF7_PSICY (Histone deacetylase n=1 Tax=Psilocybe cyanescens TaxID=93625 RepID=A0A409XIF7_PSICY)
HSP 1 Score: 85.1 bits (209), Expect = 1.150e-13
Identity = 50/127 (39.37%), Postives = 73/127 (57.48%), Query Frame = 1
Query: 2047 RLCGLVERNGRRDDLLYALVGACGLLG-------RLKVVAPARATDAHLRAYHDREYVEALRDPPSSD----TKALD---EFGLLDDCEVFEEMFDYCCAVAGASLHAANLLAKREADVAINWGGGR 2385
++ L+ N R ++++L+ + GL+G RL+VV P +AT L YH R+Y+E + D +SD T++L EFGL DDC +FE + DY VAGA+L A L + D+AI W GGR
Sbjct: 23 KISSLLPSNKNRSMIVHSLISSLGLMGLDASQTRRLQVVTPRKATYKDLAMYHTRDYLEVVLDAKNSDANPETRSLSVDAEFGLSDDCPMFEGLADYVHIVAGATLTAVTALQQDLTDIAICWDGGR 149
BLAST of mRNA_H-paniculata_contig110.649.1 vs. uniprot
Match:
A0A7S3ZCC8_9EUKA (Histone deacetylase (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3ZCC8_9EUKA)
HSP 1 Score: 82.4 bits (202), Expect = 1.350e-13
Identity = 51/138 (36.96%), Postives = 76/138 (55.07%), Query Frame = 1
Query: 2008 RSRVCLMHSARYQRLCGLVERNGRRDDLLYALVGACGLLG---RLKVVAPARATDAHLRAYHDREYVEALRDPPSSDTKA---------LDEFGLLDDCEVFEEMFDYCCAVAGASLHAANLLAKREADVAINWGGGR 2385
R+ V L++S Y ++ ++G R L AL A GL R++V+ P A+ L +H EY+ ++ S +A L E GL+DDC +FE +F+Y VAG++L AA +L + +A VAINWGGGR
Sbjct: 15 RAPVVLVYSKHYVKILDRHHKHGERMQLWEALSSAYGLFSCPSRIRVIEPRMASFEELEQFHTAEYLTYIKHNSISAKEAEFDQKKRDELQELGLIDDCYLFEGLFEYMQWVAGSTLTAAKVLVEGKAVVAINWGGGR 152
BLAST of mRNA_H-paniculata_contig110.649.1 vs. uniprot
Match:
A0A1Y1VF42_9FUNG (Histone deacetylase n=1 Tax=Piromyces finnis TaxID=1754191 RepID=A0A1Y1VF42_9FUNG)
HSP 1 Score: 82.0 bits (201), Expect = 8.800e-13
Identity = 40/119 (33.61%), Postives = 69/119 (57.98%), Query Frame = 1
Query: 2059 LVERNGRRDDLLYALVGACGLLGRLKVVAPARATDAHLRAYHDREYVEALRDPPSSD----------TKALDEFGLLDDCEVFEEMFDYCCAVAGASLHAANLLAKREADVAINWGGGR 2385
L+ N R +++LVGA GLL +++++ P A L +H +Y++ L + + + K ++E+GL DDC++F+ + YC VAG++L AA+ L + +D+ INW GGR
Sbjct: 3 LLPSNKTRSYFVHSLVGAYGLLKKIRIINPKPANKNDLTIFHSEDYIDFLLNAENQEFKEKLGKEKYEKKMNEYGLEDDCQIFKGIKKYCLLVAGSTLTAAHELISKTSDIVINWDGGR 121
BLAST of mRNA_H-paniculata_contig110.649.1 vs. uniprot
Match:
A0A1Y1WCA0_9FUNG (Histone deacetylase (Fragment) n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1WCA0_9FUNG)
HSP 1 Score: 77.4 bits (189), Expect = 1.300e-11
Identity = 43/124 (34.68%), Postives = 69/124 (55.65%), Query Frame = 1
Query: 2017 VCLMHSARYQRLCGLVERNGRRDDLLYALVGACGLLGRLKVVAPARATDAHLRAYHDREYVEALRDPPSSDTKA-LDEFGLLDDCEVFEEMFDYCCAVAGASLHAANLLAKREADVAINWGGGR 2385
V L+ S++ + L+ N R ++AL+ A GL +L V+AP T+ L +H +Y+ L D ++ L E+GLLDDC +F+ + + AG ++ AA LA +A VA++W GGR
Sbjct: 1 VVLVRSSKSIKAADLLPSNIGRASRVHALINAFGLQQKLTVIAPVPLTNRELEDFHSEDYINCLLSTGDGDGESQLAEYGLLDDCYMFDGVEQHVRYAAGGTVSAARCLANGDAGVAVHWEGGR 124
BLAST of mRNA_H-paniculata_contig110.649.1 vs. uniprot
Match:
A0A1Y3NT16_PIRSE (Histone deacetylase (Fragment) n=1 Tax=Piromyces sp. (strain E2) TaxID=73868 RepID=A0A1Y3NT16_PIRSE)
HSP 1 Score: 77.4 bits (189), Expect = 2.000e-11
Identity = 39/119 (32.77%), Postives = 65/119 (54.62%), Query Frame = 1
Query: 2059 LVERNGRRDDLLYALVGACGLLGRLKVVAPARATDAHLRAYHDREYVEALRDPPSSD----------TKALDEFGLLDDCEVFEEMFDYCCAVAGASLHAANLLAKREADVAINWGGGR 2385
L+ N R +++LVGA GLL ++++V P A L +H +Y++ L + + + K + E+ L DDC +F+ + YC VAG++L A + L + +D+ INW GGR
Sbjct: 19 LLPSNKTRSYFVHSLVGAYGLLKKIRIVNPKPANKNDLTVFHSEDYIDFLLNAENQEFKDKLGKDKYEKKMKEYSLEDDCPIFKGITKYCMLVAGSTLTAVHELISKTSDIVINWDGGR 137
BLAST of mRNA_H-paniculata_contig110.649.1 vs. uniprot
Match:
A0A139AUL7_GONPJ (Histone deacetylase n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139AUL7_GONPJ)
HSP 1 Score: 77.8 bits (190), Expect = 4.630e-11
Identity = 44/106 (41.51%), Postives = 60/106 (56.60%), Query Frame = 1
Query: 2080 RDDLLYALVGACGLLGRLKVVAPARATDAHLRAYHDREYVEALR----DPPSSDTKALDEFGL-LDDCEVFEEMFDYCCAVAGASLHAANLLAKREADVAINWGGG 2382
R L Y LV GL +++V P RATD + +H EY+E L+ D + K ++ F L +DDC VFE M+D+C +G SL AA L AD+AIN+ GG
Sbjct: 102 RLALTYHLVLGYGLHRKMEVYCPRRATDEEIATFHSEEYIEFLKRVNPDNAADWAKFMERFNLGVDDCPVFEGMYDFCQLYSGGSLEAARKLIAGTADIAINYSGG 207
BLAST of mRNA_H-paniculata_contig110.649.1 vs. uniprot
Match:
M5EB56_MALS4 (Histone deacetylase n=2 Tax=Malassezia TaxID=55193 RepID=M5EB56_MALS4)
HSP 1 Score: 76.6 bits (187), Expect = 6.440e-11
Identity = 44/103 (42.72%), Postives = 56/103 (54.37%), Query Frame = 1
Query: 2080 RDDLLYALVGACGLLGRLKVVAPARATDAHLRAYHDREYVEALRD--PPSSDTKALDEFGLLDDCEVFEEMFDYCCAVAGASLHAANLLAKREADVAINWGGG 2382
R L LV GL +KV +P AT L A+HD +YV+ L P + + A F DDC VF+ M+D+C A AGA+L AA LA D+ INW GG
Sbjct: 83 RLALTNRLVHGYGLHEYMKVYSPRWATREELEAFHDSDYVDFLSKTTPTTPLSAAFTRFNFADDCPVFDGMYDFCRAYAGATLSAARRLAAGATDICINWTGG 185
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig110.649.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 9.52e-59 / Id = 75.50 Expect = 7.33e-57 / Id = 74.17 Expect = 4.32e-32 / Id = 57.50 Expect = 1.15e-13 / Id = 39.37 Expect = 1.35e-13 / Id = 36.96 Expect = 8.80e-13 / Id = 33.61 Expect = 1.30e-11 / Id = 34.68 Expect = 2.00e-11 / Id = 32.77 Expect = 4.63e-11 / Id = 41.51 Expect = 6.44e-11 / Id = 42.72 Sequence D7G8X1_ECTSI A0A6H5JLL7_9PHAE A0A835YMW5_9STRA A0A409XIF7_PSICY A0A7S3ZCC8_9EUKA A0A1Y1VF42_9FUNG A0A1Y1WCA0_9FUNG A0A1Y3NT16_PIRSE A0A139AUL7_GONPJ M5EB56_MALS4 Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 226.5 Seed ortholog evalue 4e-56 Seed eggNOG ortholog 2880.D7G8X1 Preferred name HDAC8 KEGG ko ko:K04429,ko:K06067,ko:K07190,ko:K11405,ko:K11482 KEGG Pathway ko04010,ko04020,ko04110,ko04213,ko04330,ko04910,ko04919,ko04922,ko05016,ko05034,ko05165,ko05169,ko05200,ko05202,ko05203,ko05220,map04010,map04020,map04110,map04213,map04330,map04910,map04919,map04922,map05016,map05034,map05165,map05169,map05200,map05202,map05203,map05220 KEGG Module M00688,M00689 Hectar predicted targeting category other localisation GOs GO:0000118,GO:0000122,GO:0000228,GO:0000819,GO:0003674,GO:0003682,GO:0003824,GO:0004407,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0005829,GO:0005886,GO:0006325,GO:0006333,GO:0006342,GO:0006355,GO:0006357,GO:0006464,GO:0006476,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0007063,GO:0008134,GO:0008150,GO:0008152,GO:0009719,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0014070,GO:0016020,GO:0016043,GO:0016458,GO:0016569,GO:0016570,GO:0016575,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018205,GO:0019213,GO:0019219,GO:0019222,GO:0019538,GO:0022402,GO:0030278,GO:0030279,GO:0030544,GO:0031056,GO:0031057,GO:0031072,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031647,GO:0031974,GO:0031981,GO:0032204,GO:0032268,GO:0032269,GO:0032879,GO:0032880,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033558,GO:0033993,GO:0034983,GO:0035065,GO:0035067,GO:0035601,GO:0035690,GO:0035983,GO:0035984,GO:0036211,GO:0040029,GO:0042221,GO:0042493,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045595,GO:0045596,GO:0045667,GO:0045668,GO:0045814,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046677,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051052,GO:0051093,GO:0051098,GO:0051101,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051716,GO:0051726,GO:0051879,GO:0051983,GO:0060255,GO:0060341,GO:0061478,GO:0061587,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070887,GO:0070933,GO:0071236,GO:0071310,GO:0071396,GO:0071407,GO:0071417,GO:0071495,GO:0071704,GO:0071840,GO:0071922,GO:0071944,GO:0080090,GO:0097305,GO:0097306,GO:0098732,GO:0098813,GO:0140096,GO:1901564,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901983,GO:1901984,GO:1902275,GO:1902494,GO:1902679,GO:1902680,GO:1903320,GO:1903321,GO:1903506,GO:1903507,GO:1903508,GO:1903827,GO:1904321,GO:1904322,GO:1905268,GO:1905634,GO:2000112,GO:2000113,GO:2000615,GO:2000616,GO:2000756,GO:2000757,GO:2001141,GO:2001251 EggNOG free text desc. NAD-dependent histone deacetylase activity (H3-K14 specific) EggNOG OGs COG0123@1,KOG1342@2759 EC 2.7.11.1,3.5.1.98 COG Functional cat. BQ Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko00001,ko00002,ko01000,ko01001,ko03036 Exons 4 Model size 2388 Cds size 2148 Stop 1 Start 1
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig110.649.1
>prot_H-paniculata_contig110.649.1 ID=prot_H-paniculata_contig110.649.1|Name=mRNA_H-paniculata_contig110.649.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=716bp
MSTGRIRLGNWGRNRTEDSRQQLQSIIHTMEHEKAYAPRGGTGESGAEPL back to top mRNA from alignment at H-paniculata_contig110:19984..29174+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig110.649.1 ID=mRNA_H-paniculata_contig110.649.1|Name=mRNA_H-paniculata_contig110.649.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9191bp|location=Sequence derived from alignment at H-paniculata_contig110:19984..29174+ (Halopteris paniculata Hal_grac_a_UBK monoicous)CAAATGTAGATGCAGCTGTGCGTGAGAGGAACAGCAACCTGCTGTCGTGT
TTGACCGTTGTATATGTGTGGTTCGCATACGCGGCCGTGTAGATACAGCG
AGTGCGTGGTTCATATTGACACGTCTATTGTGTTGTGATTTCTGCTGTTG
TCGATCCACTGCTGCTGGAGGTTACAGGGTTAGCTGCGAAGCTATCATCA
TCTGAGCTGGAAAATTGTGAAACGGGTGGGCTTTTAGCAG ATGTCAACTG
GGCGCATAAGATTGGGAAATTGGGGACGCAACCGAACTGAG GTGAGGGTC
GAGTGAGGGTGAGGTAGAGGGATACCCGGTCGCTCGCAGGAGCGAATGCC
ACGAAGAGAGATTGGGGACACACGGATACTGATAGTGTCTGGTCTATCTC
ATCCCATCGATCGAAAAGTAGAAAGAGATCTGACCGGGTGAATCCATTTT
CAAAAACTGCTGAGCCGCGATTTCAACATTTTTGCCTTTACAGCCAGGTG
GTCATGGTAGGGTACAAAGTACAGTATGTGCTCGGTGATCAATGAGCATG
TAGTTTGATACGATCACGGGAGTCACATCGGCTCTCGTTGGCAATTACCA
CTCGTCATCAGTCACCCAACTATTGCACCATTGCCAAGATCACAGGGCCC
AATTTTCTACCCCTGGCGGTTGTGCCTCCTGGTATTTTCCGTGAACCGTT
CTCCCGAGGCAATTCATCTTGCAGGTGGGGTGATTCTTCTGATGCTCCGC
AGCACCAAGAAATAGCTAAAGTGCAAGCTCTCCGCCCAAAGCACGACAAT
ATGACCGTTGGATGCGAACCCTCGAAACGTCAAGTAGTACTATGCAGCCA
GTAACTCACTTGGCTTATCGATGAGGTTTCTCCTGGTCCCCTATTGCCCG
TCTCGCTCGCGCGCCTGACACCGACTCTCGTCGGAAGCCAAGAGTCAAGC
GACTGTTCACTGGAATGTATGTTTGAGTGGTATCTGTTGTCCATCATGAC
TTCTACTACAACATGTGGCATAACATGTATCCTGTGTGTATCTACTTAAC
ATTCAAGCTTGGCTATCAATGAGGTTTCTCCAGGTCCCCTCTTGTCTCGC
TCGTGCGCCTCACGCCGGCTTTCTTTGGAGGTCAACAGTCAAGCGACTAC
TCATGGGGATGTGTGGAGTGGTATCTGTAGGTCATTATGAATTCCACTAG
AACATGTGACATGCACATGTGCTTTGTGTGTCTCTACTGAACCTTCGAGC
CTTCATCTGTTCCTCTTGTGTCGTGCTTATTTCGTCCTCGTTTGTGTACA
AGGGTCCACGTGGCACTTGACTATTTTTGTGGAATTCGTTACTAATTCTT
CTTTGTGAGAGAGGCCTCATGATCTGCTGGGATCGCGTGTAGCAGCGCGG
GTATGCCGTGATCTGCCTGCCCTGTGCAGAGGCGTTACTGTATCTAGTTG
CACAAACTCCTTTATTAACTCGGGTTGTTACCCCGTTAGGATATTCATGT
ATACATGGATGCCCACTTTTTATATTCAAATCTACGCAAGCGAACCAATG
CTGTGGTCGCGGCACGACTAAAATTTAACTCCGTTGTCTGTCTTATGTTC
ATATTCTGTATGCTGCCGGCCCCTCCAGATGTTTTTGTTCAATTCTGTCC
GCTATACTGTACAATATATATATGTATATATATATATATGCCTGGTCGAT
GATCAGTATGAGCTGTTGAAGAGAAATGAACGGTTGAAGTGATGACACGC
ATTCGATGTACTGTAACTTCATGGTGAGAACCGTATTTGATTCTGACATT
TTAAACCCATTTAGCGCCGGATTAGGCTATTTCGGAACAAAAAAACTTCT
GACAACAGACTTCAAGCGACGCAGTCGTCGTGGACAGAATCGTGGTGTGC
CTGCTGCACTTTTTTTACGAGCGGAACGTGACTAAAACAAATGTGGAGTT
AGCGATTGTGACAAACAGAAACGCCAGAAAAAATGCAGCCGACGATACTG
GCATACTCTATGCACAATGCATCCCACACTCGTTGGTTTTGTCGTGGCAT
TTTTTTTTCGATCGTCGAGCAAGCAGTCATCGAAAAGAACGGAGAGCGGG
TGCTGCGACAACGTCGTGATGTTTCTAAGGTTAAATCGCCACCGGTTTGG
TGGCGTGTCGTCCAGTGTAGCGGTCTAGCGTAAGAAATATCGGAGGCGAT
TGGCCCACAAAGTAAGGTACTGTAGATCTCCGCAGTTGCTCCGTGAAGAA
ATTCGAGTATATCCATCAAACGGTCAGCGTCGAAGTCCCATGTTTTGGTT
CAGGTCGTCGCGACAGCACACACAGAGAAAGCACGAAGAATGTAAATAGC
ACGCTGCGATTGGACCGATTGATGCCACACAAGGACGGGAAGTTATTTGA
GCCGTTTTTGCGACACATCCGCGGTGCAAAAACGTGTTCAGCCATACGCC
CCTAAGGGAGCAAAATGTGCTGTTTTGCAGCCTCTCTTGCACTGTACTAA
TTTTCAACCAAATGTTTACTATAGTTTTCAGGTCGGCCGGTTTTGTAGGG
TTGTGTATCACTAATAATACATCATCGATATATCGGTATATCGATTTTAT
ATTATTGTTTAGGCTCAAAAACGATACGTGAATGTTTGCTCCTATATGTT
ATGATCATTGTCTACTGAATGTATACACGCCTTGGTTATAATACAACAAG
TGAGCAATTTGTAATATTTTAGCACAGATATTAAGTCGAAACGAGCGTTT
TTTTGCCTCCAGTGAGACCCCCTCACCAGCCGGGGGGGGGCATTGGACTC
GCGGCAAGCCGCTCGCCTGGCGCTTCGCTCGCACCAATACATCAACTATA
CATTGGTAACGTATTGGGTATGTTGGCTTCCCCAACCTACCAATATGTGT
AAATGTGTTTGAATGACTCATACAGAGCCCTCCAGTTTTCCATTTCGGTA
TTTTACCTCCGCCATGGCGTGCACCGAGCAGGCACTGAAGAAAGAGATCC
TTGGACAAACTACTGGGTACTGATGCCAGAGTTTAATCGCCACCGGTTCG
ACAGTAGGCCGTTGAGTATATCGCTCGAAATGTTGTAGACCGTGGGGGAA
AATCGTGATGGACGACAGACAGACGGATAAGACGGAAGTTCGTTTTTTTT
CGGGTCCGTCTTACCATTCTTATATCAAAGCCTGTCACGAGACCACGGCA
CTCTAAGCGGACGGGACGACCCGTCGATTTTACGAGTGGAAATGAGACCC
ATCTCGCGAGTTTCGTGACCCATACAAAAATCAGCAAGATGTCTCGGGAG
TCCCAGACATGTTCCCTCAAAATATTAACCCTGTTGTCTCGTCTCCGTCA
ATATATGTATATATACCTTTTTTTTTACCCTTGTTCCGCTCCGTGGTCCC
ATGAACAGCCTTGATTTTACCCTTTGATTTCGTCATGATCCGTAGGAAAG
GCGAAACCTCGGTACTCTCGGTTTCACCCCTGTAATAAACGCTTGTGGTT
AGCTATTGCGAGGGCAGCGAGTCGCTTTTGTTCAGTCATGGGTCATCATG
ACTACGGTGACCTATCGCTGAGAGCACCCGCGCAGCCGTGTCCGAACTAC
TCTTTTGTAGTGTGACTGGGTATTGCGTAGGGATCAGGCAACCGCTTGTT
TTTAAGGGAGCCAGACTCGACAAACGGAATAAGCGTGAGCTAATCACACA
CGACCCCCCCTACCAAAACATGCACGGCGACAAAGATACTGTTTGCTCGG
TTGTGTGCACAAAATCAAAACTGTTGTATTCCCTAATTTCTCAACGAAGA
TGCTTGCGTGGTAGTATCCCCTCAGATGTCCTATCGGTGCGAGTAAGTAT
ACTCAGTGATGAGCAGGGCTTATCACGGAGCCAGGGTGAAAATATATTTA
TATATTGATTGACAGGACGGGAACAGGGTATTTCTACCGCTACGGGGCGA
GACCGAACATAACAGGATTGAGTAATCTTCATACGGGTCTCGTCCCATCA
GGCACAAGATGATCCTGTGATGATGTGGGACAGGATGGGATGGGATCCGG
CCTCATGACGGTGACATCCCCTCGTTGCCAGTGCAAGCTGCACAACCTCA
TCGTGATTTATTTACGTGTGTACGTTGAGCACTATACACATTTTTTTACG
ACTTTCCAGGGTTTGCGAGTTGTTTGTCCGGAGTTCTTCTGTGAGCACAA
GTATTTCAGTTTTTTTGCAGCACATTTTTGACATTAGTGCTGCTATTTTC
ATTTGTACACACTACCGATTCAGTATACCGTTGTTAGATGCAAGGGGTTT
ATTCTGTGTTTCCTTCTCGAAATTTGCGAATGGCTTGGGTGCTTGATTTT
GTGTGACGTAACCCCCCCCTGCCCGAGATTCCCCCAATAACAAGTCGACG
TGTTGATGCATTTACACATTCACCTCCACAGTTTTTTTCAATCGGTATGA
TTTCCTCCGCTCCCGCGTCGCACGTGACATCAACGGCTGGGTGAAATTCA
ATTTGTAACCCCTCAGGATTCTCGGCAGCAATTACAGAGCATCATCCATA
CGATGGAGCACGAGAAGGCGTACGCACCTAGAGGTGGGACAGGGGAGAGC
GGGGCTGAGCCACTGCCAACACTACCAGTGTCTGCTGCCATGCCAAAACA
AGGGCGAACAGCAGCAGCAGCAGTTACAGCCGACTATGGAGAAGAAATTG
ACGGGAAAGGACGAAAACAAGATATCATCGCTACGGAAGAGTCTCCGCCG
TACCGTGCGATACCTGTTTCTCCGGAGATAGTCGTATTAAGGTCGTTGCC
GCCGCCGTTATCATCGCCATCGCCATCGTCATCGTCATCGTCATCGTCAT
TGTCATCGTCATCGTCATCGTCCCTATTGCCATGTTGTGCCGATTCGTGT
GATTCCTCTTTGTCTCGTTCGAGTGAGGTTTTGTCAGGATTTGGTAACGA
GAAAAAGGCAGACGGCAGCCATGGCGAATTCGGCGGCGACAGATTCTATT
ACCGTGGTAGTGGTAGTGACAGTATGCCTCGCTCCGCTGAGGCCGACAGC
GAAGGCGGCAGCAGAGAAGAGGTTCGAAGTGGGCGGGGGAGCGTACAATT
GCATAAAATGGATCATGACAGTTCTTCGAACGCGACGACGACGGCATCCG
TGTGGGACATAGAGTCTGACGACGACGATGAGGAGGAGGAGGATGGTGAT
GGTAATGGTGACGAAGACGTTGAATATGATCAAGATGGTATCGATGGAGA
GGATGATGACCAAACGCAAGAGACAGGGAGCACGCGGCAACAGCAGTTAC
CTTCAGAAGAACGGACAGTGGCATCTTTTCACGGGGGCAGATGCGGCGAG
GTACTCCGGGTGAGACGGAGCGACAGCAGCAGTCGGGGGCGCGAGCATGG
ACGGCGGGAGGTGGGATCTAACGAGGGGCATAAGGAAGGTCAAGGGGAAC
GTGCGCAGGAGCGGAGTCCCTGGCGGAGGCGAGAATGGGGCGGTGGTGGT
GAGGAGAACGAAGGACCGGCGAGAATACGAGGAGGCATTATTGGTCGTAC
AACGGCGGCGGCGGCAGCAGCAGTAGCAGCAGCCGTCGTGAACGCAGCGA
GGAGTACTCTCAGTACTACGATCATGGATGGTAGGCTGTCAGTTGGACAT
GAGAAGCAGTCGAAGGTACCTTGTTCACCAGATTCCCAACCCCTTAGGAA
AGAACCTCAAACGGCAGAGGAGACGGGAGCGGCAGCGGCGGCGGCGGCTG
CCGCCGCGGTGTTGACGGTAGTGCTAACAGCATCGCCGCCCGAATCGATT
GACGTAAACGTCCAGCAATTCCGCCAAGGTCGTCGGGAGCAACGGCAACA
TCGGCAGGTGGAAGAAGGAAGCTGTGAACTAGCACCTGCGGCGCCTCCTT
CCGCGCCAGCAGCAACAGCAGTCGAGAACAGCCCTTCCAAGGCAACCGAG
GACAAGAACAACAGCAGCAAGAACGGTCATGATAGTAACAGTAGCAGTAA
CGATGAGGGAAAGAAGCGGGGTCCCCCGTCGCCGTCGGTGACTGCGTCGC
ATCGACGGGTGGGACTCCGGCCGTGGAAGGAACGGCGGACGGGTGATTCG
GGCGGCGGCAGTGGCGGCAGCGGCGCCGTACGGCTAGTGCCGTCGACGAG
GCCTGGCGTTGTGCTGGACAGCGCGCGGATGCTCATGCCCCCCCCGCCGC
CCAATCTTGTCCGGGCAAAAATGCGGCGTCGAAGGTCGAGGGTATGCTTG
ATGCACTCAGCTAG GTGAGACGGTTACTGTAGTGTGTGTGTGTGGGGAGG
GGAAGGGGGGGTGCCGGTGCGAGTGAGGGACGGCTGAATGAGAATGATGA
GTGAAACGAAAGAACCAGGGGTGAACTCTTTAGTCTTCATATGCCCATAC
ATTAGACGACGAAGATGAGTACTTTAAATGTTTGATAGCGAATGCTCAGA
GTACTTAGTATTCGTGTACATTTTGGGGGGGGGGGGAGGGGCGTTAACCC
TTGTAGCCCTCGAAATGACAGGTGCCGACCATTTGACGGACGTGTTCGTA
GGGCAAATTGAGATGCCATTTATCATGCTTCATGAATCCTCTCGTGTAGG
CTGCGTTAAGCCCGGGGATCACTGCATGGGTCCTCTAAATGTGGTGGGCC
GCCATTTTCCGCCGCCTGTCATAAGTTTTAGGGCATGTACGCGGCTCTAA
AACACGAACGTTTTTGTATAGAAAATAGAGGAAAATCGGCAATGGGTAAC
GATTCTACAGCACGGGTCTGACGATGAGATATTCCTGCTTCGGGTGATGC
TCAAAACCTTATCATGGCGAGAATCACGAAGCAGTGCTGTTTCTTACTTT
CATCTAGGAATTACTATAGTGGCCAAAATTTAATCCCCATTTCTTAGACC
AGATTTCTCATGGGTTAGCGAACAGTGAGCCCCGAATTCTTTTTGGGTGA
GTTCTTTTGGGCAGGTCCGTGCTGTATATCAAAATTGTCACAACGTGTGT
TGTTTTTGTGGGCGTTGTGGGACAGCGGGCTGCGGCCCATACCAGCTATC
GATCAAGAGCTGACATCTTACTCCCTCATGGCATGCACAGTGCACAGCAG
GAGTCCCTGTTTATTTTATCGTACACTGGCACTGATGGCTCACATTCGGG
AACCGTAGGCTGCATGGTATTCCCCATACTTTGCTGGAGGTTTGCTGATG
AGTATGTTTGGCTATGGGCGTGAACTGCTTGGTTTCGGCATGATAATATA
TGTGTACTGGAAATACTGTACGAGTACATAATGACGAATCACCTGGCGGA
TTGACTGTTTTTTCATGGGTTTTGTTTGGGTGGGCTTGCAGGTATTTTGG
CGTCAGTATTCTTAATTGCTCGTTCATGCGATATGTAGCCACAACTTACA
CGCGAGGGATGCAGTAGTCATGCCGCCATATACGGTGTTATCGCACCCTT
TGATTATCTTTTCGAAGTCGATTTTCTCCAGAAGCAAGAGCCTGCACTGT
CGAAAATAGCAGGTCTATCGAAGATCTCGACGACATCTTTCCAACGACGC
CGCTATCGGTGTCAGCAGGACCGCCATTGTCGAGAAAATTGAGCCTGAAT
AGTAATATCAGGGTGCGATATCGAAGGGTGTTAACGGTACTTCCTCCTGG
TTGGGTCCATCAAAGTCCGTGCCCCTTGGGTAGTCTAACTTGGCTGAAAA
AATGTACGATTCGTAACTTGGATTTCAGTTAGGCTGCTTAGTCTCATCGT
GGATACCACAAAGGTATAATGTGGCAAAAAATAGAAAAGCGGGTTAAATT
GTGACACCCCTTACTTTCCATGTTGTCCTTTTGCTGAGAAGTATACACAA
GGGAGATCTGAGGCCAGCTGCATTACCTCAACACGGGATACGATGGAGTT
ATTACACGGTCATTTCATCATGTCTACTATTGACATTAACTGTGGCAGGT
AGGTTGGCTTGAGAATGAGGATTGCGTTGGATGATTGGGCTCTTTAATTT
CTGTCATGCGTCCATCCCCCCCCCCCCGACTCACTTTGTGGATAATAACC
AAGTGATCCAGAAGAGATGCTTAGCATACCTCCCTCTTGTTTTACAGCTA
CATTCGTTTATCTACCTTTACTCCAGACTACTTTTTTCGGAACCGTATTT
TCGTCTTTACTATTGATGCCACTCCTCAGTGAAGCTGTCCTCGGCGATGC
ACCCGCGTGGTGATGTCGCTATGTAGTAGTAGTTGGTGGGATAATTCTTG
ATCCTTCTTGAAGTGCACTAGAAGTGCCAGCTTTCTTGAAAGTGCTGCGT
GTTGGCTGCTATCTATCACATATCATGTATGTAAATTGTTTTTCAGCCCC
CTCGAATTGGCCCCCTGGATCATGACGCCCACATCCTCCCGGTTCCGCAG
ATACCAGCGGTTGTGCGGCTTGGTGGAGAGGAACGGGCGACGAGATGACT
TGCTTTATGCGCTGGTTGGCGCGTGTGGGCTGCTGGGCAGGCTTAAGGTT
GTGGCCCCGGCTAGAGCTACGGATGCTCACCTCCGCGCGTACCACGACAG
GGAGTACGTCGAG GTGGGGCTGTGTAAATTGGTAATCTAGACCTTACATA
CGCCTGTACATATATGTGATGTGTATGCGTGTACGTATGGATGGATGTTG
GAAAACAGTTGGTGGGAGTGACGTGAAGTGGCGGAAGCTATGAGCTTAAC
GCTCCCTCATTGTAGGTTTGGTGATGAGTATGCCAAGCAGTGGTTGATTG
TAGTAGGGGCTACTTAGCCTCAGCTTCTACGTTAGTTACAAGTCCATGGT
GGATTGAGAGAGAAATATGAAAGCAGAAACCGCCCCCTCTTGCTTTCCCC
CTTTATCTATATCCTGAAATTGCAAAAAGATGACGATAGCGGTTTAACGG
TAGGAGATGGAAATCGGCTTGAAAAGACGAGGGTTTTTGATTGCATGTAT
ATATAGTCGTATGTATACATTCTTTTTTTTTGGTTTCATGTTTTATGTTT
ATCAGGCACTTCGCGACCCTCCGTCGTCGGATACCAAGGCGCTCGACGAG
TTCGGCCTTCTGGACGACTGTGAAGTGTTCGAGGAGATGTTTGACTACTG
CTGCGCTGTCGCTGGAGCATCCCTGCACGCGGCCAACCTCTTGGCCAAAA
GGGAAGCAGACGTGGCCATCAACTGGGGGGGTGGGAGGTGA back to top Coding sequence (CDS) from alignment at H-paniculata_contig110:19984..29174+
>mRNA_H-paniculata_contig110.649.1 ID=mRNA_H-paniculata_contig110.649.1|Name=mRNA_H-paniculata_contig110.649.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4296bp|location=Sequence derived from alignment at H-paniculata_contig110:19984..29174+ (Halopteris paniculata Hal_grac_a_UBK monoicous) back to top