mRNA_H-paniculata_contig10986.638.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig10986.638.1
Unique NamemRNA_H-paniculata_contig10986.638.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: A0A6H5JNX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNX3_9PHAE)

HSP 1 Score: 409 bits (1050), Expect = 6.020e-127
Identity = 201/254 (79.13%), Postives = 225/254 (88.58%), Query Frame = 2
Query:  128 VSRYRAVGRAMVKCLFEGRRIGSRLAPSIFKFLTGTQPTLRDLQDYDPVAFDGLKWVLANTVTRDL-FHFDEVGQSEKGPVTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEEHISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPEDALRRFLIFVCGTPSLPAAAAGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDKKAVLEHKLLQAMNNTASFDVV 886
            + RYRA+GR MVKCL EGRRIGSRLAPS+FKF+TGT  TLRDLQD+D  +F+ LKW+LANT  RD+ F F++VG  +KGPVT+GNKAEYV+A+ARLILVGSR PALEALK GFA ALRDLS  +A F+  LSHADWRVLLCGEEH+SGPQVVAVL WY FP  SEVP W++SLLLSLPEDALRRFLIFVCGTPSLPA +AGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDK++VL HKLLQA+NNTASFDVV
Sbjct: 1712 LGRYRAIGRLMVKCLLEGRRIGSRLAPSVFKFITGTDTTLRDLQDFDSQSFESLKWMLANTGMRDMGFDFEDVGLPDKGPVTDGNKAEYVSAKARLILVGSRRPALEALKAGFAEALRDLSPGAALFLELLSHADWRVLLCGEEHVSGPQVVAVLTWYGFPASSEVPTWVKSLLLSLPEDALRRFLIFVCGTPSLPAPSAGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDKESVLRHKLLQAVNNTASFDVV 1965          
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: D8LAX6_ECTSI (Outermembrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAX6_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 4.490e-66
Identity = 122/203 (60.10%), Postives = 146/203 (71.92%), Query Frame = 2
Query:  128 VSRYRAVGRAMVKCLFEGRRIGSRLAPSIFKFLTGTQPTLRDLQDYDPVAFDGLKWVLANTVTRDL-FHFDEVGQSEKGPVTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEEHISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPEDALRRFLIFVCGTPSLPAAAAGKV 733
            + RYRA+GR MVKCL EGRRIGSRLAPS+FKF+TGT  TLRDLQD+D  +F+ LKW+LANT  RD+ F F++VG  +KGPVT+GNKAEYV+A+ARLILVGSR PALEALK GFA ALRDLS  +A F+  LSHADWRVLLCGEEH+SGPQ          P     P W +  +L LP   L    +F  G   +P +  G+V
Sbjct: 1587 LGRYRAIGRLMVKCLLEGRRIGSRLAPSVFKFITGTDTTLRDLQDFDSQSFESLKWMLANTGMRDMGFDFEDVGLPDKGPVTDGNKAEYVSAKARLILVGSRRPALEALKAGFAEALRDLSPGAALFVELLSHADWRVLLCGEEHVSGPQGGGGFPLVGVPGWQGGPHWGKVFVLLLPGRPLGTVFVFGVGDALVPGSFRGQV 1789          
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: A0A835YG59_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YG59_9STRA)

HSP 1 Score: 213 bits (541), Expect = 1.500e-61
Identity = 122/280 (43.57%), Postives = 148/280 (52.86%), Query Frame = 2
Query:  137 YRAVGRAMVKCLFEGRRIGSRLAPSIFKFLTGTQPTLRDLQDYDPVAFDGLKWVLANTVTRDL------FHFDEVGQSEKGPVTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEEHISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPEDALRRFLIFVCGTPSLPAAAAGKVE------------------------ITVRCQPRSAALPAAHTCFFQLDVPDYDKKAVLEHKLLQAMNNTASFDVV 886
            Y  +GRA+  CL+ GRR+G  LAPS                                              F++VG    G VT GN+A++V A+ R ILV SRE AL A   G    L DLS  +   M  L+ ADWRVLLCG+ H+S  QVV+ L+WYNFP  S VP+W+ +LLLSL ED LRRFL+FVCG+PSLP A+                             ITVRCQPRSAALP AHTCF  LDVPDY  +A L  KLLQA+   A+FD+V
Sbjct:  227 YELLGRAVALCLYSGRRVGGALAPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGLSFEDVGDPGGGAVTAGNRAQFVQAKVRHILVASREAALAAAAAGVTRGLADLSPEAPSLMRLLAPADWRVLLCGDTHVSSAQVVSALRWYNFPPASGVPRWLPALLLSLGEDTLRRFLVFVCGSPSLPPASGSXXXXXXXXXXXXXXXXXXXXXXXXFAVITVRCQPRSAALPVAHTCFLHLDVPDYASEAALRRKLLQAVTEAATFDLV 506          
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: A0A7S2WLZ2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLZ2_9STRA)

HSP 1 Score: 204 bits (519), Expect = 1.600e-55
Identity = 112/259 (43.24%), Postives = 158/259 (61.00%), Query Frame = 2
Query:  137 YRAVGRAMVKCLFEGRRIGSRLAPSIFKFLT---------GTQP-TLRDLQDYDPVAFDGLKWVLANTVTRDL-FHFDEVGQSEKGPVTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEEHISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPEDALRRFLIFVCGTPSLPAAAAGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDKKAVLEHKLLQAMNNTASFD 880
            YRAVGRA+VKC +EG+RIGS  A  ++KFL          G +P  L DL+ +DP     L W+L NT    L   F+++       V++ NKAE+V  +AR +LV  R   LEA++ GF  A+ DLS  + PF+  LS ADW VLLCGE++++   V   L++  FP  S++P+W+   +L    D LRRFLIF  G+PSLP AA+    I V+    S +LP AHTCFF+LD+PDY  +++   KL++A+   A+FD
Sbjct: 1362 YRAVGRAVVKCFYEGKRIGSHFANCLYKFLAHGQEVKHAKGIEPRALDDLKQWDPEMGSSLDWLLRNTGAEHLGLDFEDIPGHSSQTVSDANKAEFVHMKARYVLVECRLAQLEAIRSGFWQAMMDLSPEATPFLRLLSSADWSVLLCGEDNLTPEAVTDCLEFRGFPKSSKIPKWLPQTILQFSPDNLRRFLIFCTGSPSLPPAASD-TRIGVQYNRPSNSLPVAHTCFFKLDLPDYPDQSIFVEKLMKAIQECATFD 1619          
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: A0A8J2SKZ0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKZ0_9STRA)

HSP 1 Score: 178 bits (451), Expect = 9.490e-48
Identity = 111/269 (41.26%), Postives = 147/269 (54.65%), Query Frame = 2
Query:  134 RYRAVGRAMVKCLFEGRRIGSRLAPSIFKFLT--------GTQPTLRDLQDYDPVAFDGLKWVLANTVTRDL---FHFDEVGQSEKGP------VTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEE-HISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPEDALRRFLIFVCGTPSLPAAAAGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDKKAVLEHKLLQAMNNTASFDVV 886
            R  A GRA+V  L+EG     RL PS+FK+L         G    LRDLQ +DP     L+ +LA            F +V  S+         VTE NK  +V  + R  LVG R  ALEA++ GF  ALR+LS  +APF+   S  DWRVLLC ++  ++  +V+  L +  +P RS VP  +R  + +  +D+LRRFL+F  G+P LP+A     EI VR QPRS ALP AHTCFF LD+PDY  +     KL  A+    +FD V
Sbjct:  326 RLEAFGRALVAALYEGCGAPPRLGPSLFKYLAHGAAHAAAGDGRALRDLQKFDPALGASLERMLARAPPDGQGWGLDFGDVSSSDDDAGGGARAVTEANKHAFVVLKVRRALVGRRRDALEAIRRGFVAALRELSPEAAPFLKLFSSTDWRVLLCADDDRLTPDRVLDALAFVGWPKRSVVPDALRRSVRAFDKDSLRRFLVFATGSPGLPSAPG--FEIQVRAQPRSPALPVAHTCFFHLDIPDYADEGEFVAKLTTAILECGTFDRV 592          
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: A0A7S3JMR1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JMR1_9STRA)

HSP 1 Score: 164 bits (416), Expect = 8.730e-42
Identity = 106/291 (36.43%), Postives = 154/291 (52.92%), Query Frame = 2
Query:  128 VSRYRAVGRAMVKCLFEGRRIGSRLAPSIFKFLT--------GTQPTLRDLQDYDPVAFDGLKWVLANTVTRDLFH----FDEVGQSE----------------------KG---PVTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEEHISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPE-DALRRFLIFVCGTPSLPAAAAGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDKKAVLEHKLLQAMNNTASFDVV 886
            +++  A+GRA+V   +EG  + S LAPSIFKFL         G    LRDLQ +DP     L+ +LA+      F     FD++  +E                      KG   PVTE NK ++V  + R IL G R  +L AL  GF  AL +LS  ++P +  LS  DWR+LL  +++++  +V+  L +  FP  S +P+ ++  + S    D+LRRFL+F  G+P++P      + I VRC P S ALP AHTCFF LD+PDY+ +     K   A++  +SFD V
Sbjct: 1412 LAKMHAIGRALVTACYEGCGVPSTLAPSIFKFLARGSRHVAAGDARALRDLQKFDPSLGASLENMLASVPPDGSFDWGLDFDDITGTEEDRDHEDDDQRAFPHSSASSPRKGRPRPVTEANKHQFVVLKVRWILTGCRVESLNALGQGFHTALSELSPEASPLLKLLSSTDWRLLLTADDNLTPERVLDTLDFVGFPKTSIIPEALKRTIESFSNTDSLRRFLVFTTGSPTIPNDGRD-LRIQVRCLPLSGALPVAHTCFFHLDIPDYEDEGTFITKFTMALHECSSFDRV 1701          
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: D3B9B5_POLPP (Uncharacterized protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B9B5_POLPP)

HSP 1 Score: 127 bits (318), Expect = 8.460e-29
Identity = 78/245 (31.84%), Postives = 126/245 (51.43%), Query Frame = 2
Query:  137 YRAVGRAMVKCLFEGRRIGSRLAPSIFKFLTGTQPTLRDLQDYDPVAFDGLKWVLANTVTRDLFHFDEVGQSEKGP---VTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEEHISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPEDALRRFLIFVCGTPSLPAAAAGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDKKAVLEHKLLQAMN 862
            Y+ +G+  +K + +G+ I     PS FKFL    P L+DL+ YDP      K VL              G  E G    VT+ NK +++      IL+GSR+  L+A K GF      +  ++A F  F S  + ++L+CG + +    +   +K+  FP  S+ P+   S++ ++ +D L RFL F+ G   +P     K  +++   P+S  LP AHTC +QLD+PDY    +L+ K+LQ ++
Sbjct: 1379 YKTLGKIFLKAIIDGKPIPDAFPPSFFKFLLNISPNLQDLEAYDPQLGQSFKKVLLLDNIDQYLSTTFEGLVENGDEILVTDDNKEDFIQKNIDKILIGSRKYQLDAFKSGFMS----IESLNAHFALF-SPTELQLLMCGNQLVDAELLKRHIKFVGFPASSDTPKHFLSVIDAMTQDELHRFLRFLTGMVVIPMQGLEK-PLSIIHIPKSEKLPCAHTCSYQLDLPDYSNFELLKKKILQMLD 1617          
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: F0ZPV0_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZPV0_DICPU)

HSP 1 Score: 120 bits (300), Expect = 2.010e-26
Identity = 76/253 (30.04%), Postives = 123/253 (48.62%), Query Frame = 2
Query:  137 YRAVGRAMVKCLFEGRRIGSRLAPSIFKFLTGTQPTLRDLQDYDPVAFDGLKWVLANTVTRDLFHFDEVGQSEKGP---VTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEEHISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPEDALRRFLIFVCGTPSLPAAAAGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDKKAVLEHKLLQAMNNTASFDVV 886
            ++ +GR  +K + +G+ I     PS FK+L   +P L+DL+ YDP      K VL      D       G  E G    VT+ NK +++      +LV  R+  LEA K GF      +  ++A F  F S  + ++L+CG   +    +    K+  FP  S  P++   ++  + +D L  FL F+ G   +P     K  +++   P+S  LP AHTC +QLD+PDY+   +L+ KL+Q +     F  +
Sbjct: 1473 FKVLGRVFLKAVIDGKPIPDVFPPSFFKYLLNIKPNLQDLEVYDPQLALSFKKVLVLDNIEDYLTTTFEGLIEGGENIEVTDSNKEDFIQKNIERVLVDCRQSKLEAFKSGFMS----IESLNAHFALF-SPTELQLLMCGNTLVDASVLQKSFKFIGFPDSSNTPKFFCKVIEEMSQDELHLFLRFLTGMVVIPLQGLEK-PLSIINVPKSEKLPCAHTCSYQLDLPDYNDLDLLKRKLIQMLEWVEGFGFI 1719          
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: SPKUL_DICDI (Bifunctional serine/threonine-protein kinase/NEDD4-like E3 ubiquitin-protein ligase n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=SPKUL_DICDI)

HSP 1 Score: 119 bits (299), Expect = 2.760e-26
Identity = 79/250 (31.60%), Postives = 122/250 (48.80%), Query Frame = 2
Query:  137 YRAVGRAMVKCLFEGRRIGSRLAPSIFKFLTGTQPTLRDLQDYDPVAFDGLKWVLANTVTRDLFHFDEVGQSEKG---PVTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEEHISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPEDALRRFLIFVCGTPSLPAAAAGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDKKAVLEHKLLQAMNNTASF 877
            ++ +G+  +K + +G+ I      S FK+L G +  LRDL+ YDP      K VL      +       G  E G   PVT+ NK E++      +LVG R+  LEA K GF      +  ++A F  F S  + ++L+CG   +    +    K+  FP  S  P+  R  +  + +D +R FL FV G  +LP +   K  I++   P S  LP AHTC +QLD+PDY+     + KL++ +     F
Sbjct: 1641 FKILGKIFLKSIIDGKPIPDCFPTSFFKYLLGVKVNLRDLEIYDPQLAQSFKKVLVLDNIEEYLSTTFEGLIEGGESIPVTDLNKEEFIQRNIERVLVGCRQSKLEAFKSGFMS----IDSLNAHFALF-SPTELQLLMCGNTLVDSSVLQKNFKFIGFPDTSSTPKDFRRAVDEMNQDEIRLFLRFVTGMVALPLSGFEK-SISIIQVPLSQKLPCAHTCSYQLDLPDYNDFDTTKKKLIKMLEYVDGF 1884          
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Match: A0A8J4PNL3_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PNL3_9MYCE)

HSP 1 Score: 113 bits (283), Expect = 3.430e-24
Identity = 68/244 (27.87%), Postives = 126/244 (51.64%), Query Frame = 2
Query:  137 YRAVGRAMVKCLFEGRRIGSRLAPSIFKFLTGTQPTLRDLQDYDP-VAFDGLKWVLANTVTRDLFHFDE--VGQSEKGPVTEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFLSHADWRVLLCGEEHISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPEDALRRFLIFVCGTPSLPAAAAGKVEITVRCQPRSAALPAAHTCFFQLDVPDYDKKAVLEHKLLQAM 859
            ++ +G+  +K + +G+ I      S FK+L   +P ++DL+ +DP +A    K ++ + +   L    E  +   E  PV + NK +++      +L+G R+  LE+ K GF      +  ++  F  F S  + ++L+CG   +    +    K+  FP+ S+ P +   ++  + +D L  FL F+ G   +P     K  +++   P+S  LP+AHTC +QLD+PDY+   +L+ KLLQ +
Sbjct: 1386 FKILGKIFLKAVIDGKPIPDAFPSSFFKYLLDIKPNIQDLESFDPQLALSFKKVLMLDNIDEYLCTTFEGLIEDGENIPVNDLNKEDFIKRNIDKVLIGCRQSRLESFKSGFMS----IESLNTHFKLF-SPTELQLLMCGNTLVDANMLQKNFKFIGFPSDSQTPTYFSKVIEKMSQDELHLFLRFLTGMVVIPLEGLEK-PLSIVYIPKSDKLPSAHTCSYQLDLPDYNDHDILQKKLLQML 1623          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10986.638.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JNX3_9PHAE6.020e-12779.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LAX6_ECTSI4.490e-6660.10Outermembrane protein n=1 Tax=Ectocarpus siliculos... [more]
A0A835YG59_9STRA1.500e-6143.57Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2WLZ2_9STRA1.600e-5543.24Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J2SKZ0_9STRA9.490e-4841.26Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3JMR1_9STRA8.730e-4236.43Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
D3B9B5_POLPP8.460e-2931.84Uncharacterized protein n=1 Tax=Polysphondylium pa... [more]
F0ZPV0_DICPU2.010e-2630.04Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
SPKUL_DICDI2.760e-2631.60Bifunctional serine/threonine-protein kinase/NEDD4... [more]
A0A8J4PNL3_9MYCE3.430e-2427.87Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10986contigH-paniculata_contig10986:113..4261 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score238.0
Seed ortholog evalue5.1e-60
Seed eggNOG ortholog2880.D8LAX6
KEGG koko:K10592
KEGG Pathwayko04120,map04120
Hectar predicted targeting categorysignal peptide
GOsGO:0000151,GO:0003674,GO:0003824,GO:0004842,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006811,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007417,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010498,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016032,GO:0016567,GO:0016740,GO:0019058,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0019941,GO:0023052,GO:0030163,GO:0030260,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0034220,GO:0036211,GO:0043161,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044403,GO:0044409,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046718,GO:0048519,GO:0048523,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051252,GO:0051253,GO:0051603,GO:0051701,GO:0051704,GO:0051716,GO:0051806,GO:0051828,GO:0055085,GO:0060255,GO:0061630,GO:0061659,GO:0065007,GO:0070647,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1990234,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.ubiquitin protein ligase activity
EggNOG OGsCOG5021@1,KOG0939@2759
EC2.3.2.26
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Exons5
Model size941
Cds size822
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928805.0313947-UTR-H-paniculata_contig10986:112..1791622928805.0313947-UTR-H-paniculata_contig10986:112..179Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10986 113..179 +
1691480626.6080012-UTR-H-paniculata_contig10986:112..1791691480626.6080012-UTR-H-paniculata_contig10986:112..179Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10986 113..179 +
1622928805.1076791-UTR-H-paniculata_contig10986:4209..42611622928805.1076791-UTR-H-paniculata_contig10986:4209..4261Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10986 4210..4261 +
1691480626.6668792-UTR-H-paniculata_contig10986:4209..42611691480626.6668792-UTR-H-paniculata_contig10986:4209..4261Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10986 4210..4261 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928805.0468574-CDS-H-paniculata_contig10986:179..3711622928805.0468574-CDS-H-paniculata_contig10986:179..371Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10986 180..371 +
1691480626.6198173-CDS-H-paniculata_contig10986:179..3711691480626.6198173-CDS-H-paniculata_contig10986:179..371Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10986 180..371 +
1622928805.057467-CDS-H-paniculata_contig10986:548..6471622928805.057467-CDS-H-paniculata_contig10986:548..647Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10986 549..647 +
1691480626.6282449-CDS-H-paniculata_contig10986:548..6471691480626.6282449-CDS-H-paniculata_contig10986:548..647Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10986 549..647 +
1622928805.0717347-CDS-H-paniculata_contig10986:1884..21001622928805.0717347-CDS-H-paniculata_contig10986:1884..2100Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10986 1885..2100 +
1691480626.6422539-CDS-H-paniculata_contig10986:1884..21001691480626.6422539-CDS-H-paniculata_contig10986:1884..2100Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10986 1885..2100 +
1622928805.0844312-CDS-H-paniculata_contig10986:2675..28311622928805.0844312-CDS-H-paniculata_contig10986:2675..2831Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10986 2676..2831 +
1691480626.6523-CDS-H-paniculata_contig10986:2675..28311691480626.6523-CDS-H-paniculata_contig10986:2675..2831Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10986 2676..2831 +
1622928805.0963166-CDS-H-paniculata_contig10986:4050..42091622928805.0963166-CDS-H-paniculata_contig10986:4050..4209Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10986 4051..4209 +
1691480626.6596303-CDS-H-paniculata_contig10986:4050..42091691480626.6596303-CDS-H-paniculata_contig10986:4050..4209Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10986 4051..4209 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10986.638.1prot_H-paniculata_contig10986.638.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig10986 180..4209 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig10986.638.1

>prot_H-paniculata_contig10986.638.1 ID=prot_H-paniculata_contig10986.638.1|Name=mRNA_H-paniculata_contig10986.638.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=274bp
MFFPLVSLFFFSSSLCGILLVSRYRAVGRAMVKCLFEGRRIGSRLAPSIF
KFLTGTQPTLRDLQDYDPVAFDGLKWVLANTVTRDLFHFDEVGQSEKGPV
TEGNKAEYVAARARLILVGSREPALEALKGGFAGALRDLSKISAPFMGFL
SHADWRVLLCGEEHISGPQVVAVLKWYNFPTRSEVPQWIRSLLLSLPEDA
LRRFLIFVCGTPSLPAAAAGKVEITVRCQPRSAALPAAHTCFFQLDVPDY
DKKAVLEHKLLQAMNNTASFDVV*
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mRNA from alignment at H-paniculata_contig10986:113..4261+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10986.638.1 ID=mRNA_H-paniculata_contig10986.638.1|Name=mRNA_H-paniculata_contig10986.638.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4149bp|location=Sequence derived from alignment at H-paniculata_contig10986:113..4261+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTACGACTTATGACCGTTTCTTGTTTTGTTATTACCACATTTTGCACATT GTCTTCTTTTTCGTCACATGTTTTTCCCTCTTGTCTCTCTTTTTTTCTTT TCTTCTTCGCTGTGTGGCATTTTATTGGTTTCCAGATATCGAGCCGTGGG AAGAGCCATGGTAAAGTGTCTCTTTGAGGGCAGGCGAATAGGCAGCCGAC TGGCGCCCAGCATCTTCAAGTTCCTCACGGGCACTCAGCCTACGCTTCGA GACCTACAGGCAAGTGCCTCGGTCAAAATAATAGAGGAATTGAGTTCAGC GAAGGGGGGAAAGATGCTCCGTTGTCTCGAGGAAGCTTGGTCAACGGTCT AATTACCTGAGACATTCAAGGTATCAAAAGCCCCCCCCCCCCATCCCCTC CCGCCCTTCGCTTGTATCGGCTGATGGTGACTGCAGGACTATGATCCGGT GGCTTTCGATGGACTGAAGTGGGTCCTGGCGAATACAGTCACGCGTGATC TTTTCCATTTCGACGAGGTTGGTCAGTCAGAAAAGGTGCGCGTCTTTGCC TTCGGCCTTTTTTTGTTCTGACTAGCCAGTAAAATAAAACGTTGGTTGCT ACTTCCTACCTATCGTGAGTGAAGTGGGTTGTGTTCGCCAAATCATATTT CTAGGTCTCAAGACTGTTCAGAGGCTGCGGTTGGAATAGTTGAAAAGCTG AAATCTGATGGATTCGTAAGGGCTATTCCGACGTGCATTCCGTTTTGTGT ATGAGGATTAATGGGCCGCTCAAGGTTTCGGCTAATTTTGACCAATTCAC TTTTTTCGTTTTTTTTCGTTTTTTCATCGGGAAAATACGAAAAGGGGCCA TAACCTGACCGTTCTTCCACCGACAGTTATGATGTTTTGCGCCACGAGGC TCCCGATGGATTTCGCCAATTTCTGTGAAATTTCGAGCATCAATCAATTT GAAAACATATAGGATTATGAAGAAGAACAAAAAAAATCAGAGATGGTTAC GTGCCTCTGATAGACTCAACCGACTTTACCTATGGCACAGAGGAGGTGTA TGGAAAGCCTCTGGAAATAATTGGCGATTTGGTGTATCCGGGGTGTATCC GGAGTTCGTTGCCCCTTAACGGGGTATTGGATTGTCGCTCCGAGTCGGGC AGGAAAAGCAAGAAATATGTTGCCGCCCGAACTGGACGCTGAGTATATAC TTGTAGCCAATCGTCGGATGGTTGAATGTGACTCAGTACCAACGTTGTGT GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCGCGCGCGTGTGTTTTCTT TTTCATCGTGATGCCGCTGATTGGTCAGTTCGTTTAGCGCCGGCCGGCAT TCGCCTAACGACTCGTCAAAATACCCAATTGTGACCTATTTCCAGTGTCT CGCAGCAGTAGCCCGAGTAGGAAACCATGGGAAATATGGAAATGCTGCAA AAAAGCCTGTGCGGCTTGGATTTGGGCCGAGTATTATGTCTGCTACAGTA TACCTCGTGGTTACCCCTCTGCCCGATGAGCCTGACCAAGGCCGAACTGG TTGATCTCCCCTCCAGACACTGTTGAGACACTGTTCGGTGTTCGGCTTTC ACGATATTAGCAGTGTAAGGCAGTTATCTGGTTGGCCATAACATACCTGT AGAAAGAAGTCTAGCAACACATCATGTCACACCGTTTCTTGGATAATACG CCTTTTGTTGATATGTTCTAATCTAACCCCGCTCCCCCCCCAATCACGCC TGCCTCCTTGGTTCCAAAACAGGGACCTGTGACGGAGGGCAATAAGGCGG AGTACGTGGCCGCTAGGGCTCGCCTCATTCTTGTGGGATCGCGCGAGCCG GCGCTCGAAGCTCTCAAGGGAGGGTTCGCAGGCGCCCTGAGAGACCTGTC AAAGATTTCCGCGCCTTTCATGGGCTTCCTGTCCCACGCGGATTGGAGGG TACTACTTTGCGGCGAGGAGCATATCAGTGGACCTCAGGTGGGCGTGTGA GGGTGTGGCAGCAGCGGGGGGGGCGAGGGGGGGGTTCGTTTCGCGGCGGA AATACTGTTCCGACACAATGCTTTTGTTTTTTTGGATAGGATCCTTCCTC CTTCCCCCGCGTTTTTTCGACTGTGTTGGGTGTATTAATGAGCTTGAGAT GCTGCTGCCATTATTGTGGATAAATCTGCCAACCTGTTGTGCTAAAAAAG ATACTACCATTGTTGCAGTGGATTGTGTTCGCGCTAAATTTTCGTCTTGT GGGACTTGAGTGTGACTGACGGCAGGACACAGTCGCGTAGACTGTACGTG GCGCGGGGAGTGTGTCCATTATTTCGGAGCAAGTGGATTTTCCTCTGGAT AGTCGTGGCTCAGTGAATCAAACTTATTTGCTCTGTATTGCCAGGGGTGA CTTGTGGGCTCCTTGGTGGATATCGCCCTGAGGAGGCTCCCCTCGGCATG AAGCAGTTGAGTGCATTCGAGGGTGCAAAAACATGTACTGCTGTACCAGC GCCGAAATTCTATTGAACATGGTTTTACGCCATCCGCACGCGCACCCGAA ACAAAATACACAGGTTGTTGCTGTCCTGAAATGGTACAACTTTCCGACGA GAAGCGAGGTGCCACAGTGGATCCGGTCGTTGCTTCTCTCCTTGCCTGAG GACGCCTTAAGGAGGTTTCTCATATTCGTGTGCGGGACGCCGTCGTTGCC TGCCGCTGCCGCGGGGAAGGTGTGTGTGTGTGTGTGCATGTGTGTGTCTT TATTGTTTTGATTATTTGGTTGATGGTTAAGCGTTGGTATCTGCCAGCAG AACTTGAAATTGTATCATGGTGGATATCGTTCCTCATGGTTTTGCTCAAA CGCTACTCCGTTTGTAATGTTCCATATCCCCTGGCTCTTCTCTGACCCTT GATAGATTGCTAGCTTTGAAATATTTCACCTGCAGCAGAAAAGTGTGTGT TATCCACACAAGATTTCCAAGCCCAGCCAGACTCAATTTCAAATCCCGAG AACGGCCCCTTTAGTATTATCATGTTATGGTCCTGTGGATATATTTCACG AGCAATTGTTTTTTATGGTGCGTTTTGTTTATTTTCAAACCCCGGAAGGC TAAGACAAAGACCTCTATCCGATGCATATGAACACGTGGAAGATCGCTTC TTCCCCGTGGTTGTTTGCTGCTTTTCTCGTAGTACCGAACATCGCATCGA ATTGTCGATCATTGACTTGGTTTGGTCACGGTCGATAAGGCTGTGCCGGA TCGAAACCGAAGACTTCATCCCGTGATGTTTCTGCCGAAGGGGATGCAGT ATTCAATAGGTAGATATTGAGCTTTCGTTGCCTCGAACGCAAATACCGTT AGAGATGTTGATATTTTCAGAATGGCTCAGGGCATGTGCCCCAGTCGATT CCTTGGTGACTATTGGGCAGAATTCGACACGGGGCGAACATGATATGCGA CGCCGCGGTTCTTCGCTATTCCATTGCTGTTGCCAAAGCGGAATATCGCT CAATGCGTCGAGTCACGCGTTCTGTCGATACATGATTACATGGAACATTA TCTTGGATCTTTTGCTGAAGCAATTTTAAGGTCACGTTTAGATTGCAATA AGTCAATGACTGGTTGCTATTGACTCCAAAGTGAAGATCCCATTTTGTAG TTATTTTGTCAAATTTCTTGAGATGTAACTACTGTGCTGCCGTCGCAACC TACAAATGTGCAACACGTTCCGTATGGTGCTTTGTCAACGCGAAAGACAA GTTACGTTATGTATTTGAGCCGCAGCACCAGCTGATATGTGGCGAGCTGA TGAAGTAGTTACTTTTACTCTTTTTCTTCTAGCTTTGAAACAACAGTCGT CAGGTTCATACCTTGAGGATTTCAGAGTTGGTGACTACAAGTATGTGTCT CGTTCGTGTGCCCCCGTGTGTATCATGTATCGATGCAGGTGGAGATCACT GTCCGCTGTCAGCCCAGATCTGCGGCGCTGCCTGCCGCACATACTTGCTT CTTCCAGCTGGACGTGCCTGATTACGACAAAAAAGCAGTGCTCGAGCACA AGCTTCTGCAGGCAATGAATAACACGGCCTCGTTTGATGTGGTGTAACTA TATCCAGGAACGCAGAATGCCCCAGAGGCGTGCGCAGGGCCGGAGCGTG
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Coding sequence (CDS) from alignment at H-paniculata_contig10986:113..4261+

>mRNA_H-paniculata_contig10986.638.1 ID=mRNA_H-paniculata_contig10986.638.1|Name=mRNA_H-paniculata_contig10986.638.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1644bp|location=Sequence derived from alignment at H-paniculata_contig10986:113..4261+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTTTTTCCCTCTTGTCTCTCTTTTTTTCTTTTCTTCTTCGCTGTGTGG
CATTTTATTGGTTTCCAGATATCGAGCCGTGGGAAGAGCCATGGTAAAGT
GTCTCTTTGAGGGCAGGCGAATAGGCAGCCGACTGGCGCCCAGCATCTTC
AAGTTCCTCACGGGCACTCAGCCTACGCTTCGAGACCTACAGATGTTTTT
CCCTCTTGTCTCTCTTTTTTTCTTTTCTTCTTCGCTGTGTGGCATTTTAT
TGGTTTCCAGATATCGAGCCGTGGGAAGAGCCATGGTAAAGTGTCTCTTT
GAGGGCAGGCGAATAGGCAGCCGACTGGCGCCCAGCATCTTCAAGTTCCT
CACGGGCACTCAGCCTACGCTTCGAGACCTACAGGACTATGATCCGGTGG
CTTTCGATGGACTGAAGTGGGTCCTGGCGAATACAGTCACGCGTGATCTT
TTCCATTTCGACGAGGTTGGTCAGTCAGAAAAGGACTATGATCCGGTGGC
TTTCGATGGACTGAAGTGGGTCCTGGCGAATACAGTCACGCGTGATCTTT
TCCATTTCGACGAGGTTGGTCAGTCAGAAAAGGGACCTGTGACGGAGGGC
AATAAGGCGGAGTACGTGGCCGCTAGGGCTCGCCTCATTCTTGTGGGATC
GCGCGAGCCGGCGCTCGAAGCTCTCAAGGGAGGGTTCGCAGGCGCCCTGA
GAGACCTGTCAAAGATTTCCGCGCCTTTCATGGGCTTCCTGTCCCACGCG
GATTGGAGGGTACTACTTTGCGGCGAGGAGCATATCAGTGGACCTCAGGG
ACCTGTGACGGAGGGCAATAAGGCGGAGTACGTGGCCGCTAGGGCTCGCC
TCATTCTTGTGGGATCGCGCGAGCCGGCGCTCGAAGCTCTCAAGGGAGGG
TTCGCAGGCGCCCTGAGAGACCTGTCAAAGATTTCCGCGCCTTTCATGGG
CTTCCTGTCCCACGCGGATTGGAGGGTACTACTTTGCGGCGAGGAGCATA
TCAGTGGACCTCAGGTTGTTGCTGTCCTGAAATGGTACAACTTTCCGACG
AGAAGCGAGGTGCCACAGTGGATCCGGTCGTTGCTTCTCTCCTTGCCTGA
GGACGCCTTAAGGAGGTTTCTCATATTCGTGTGCGGGACGCCGTCGTTGC
CTGCCGCTGCCGCGGGGAAGGTTGTTGCTGTCCTGAAATGGTACAACTTT
CCGACGAGAAGCGAGGTGCCACAGTGGATCCGGTCGTTGCTTCTCTCCTT
GCCTGAGGACGCCTTAAGGAGGTTTCTCATATTCGTGTGCGGGACGCCGT
CGTTGCCTGCCGCTGCCGCGGGGAAGGTGGAGATCACTGTCCGCTGTCAG
CCCAGATCTGCGGCGCTGCCTGCCGCACATACTTGCTTCTTCCAGCTGGA
CGTGCCTGATTACGACAAAAAAGCAGTGCTCGAGCACAAGCTTCTGCAGG
CAATGAATAACACGGCCTCGTTTGATGTGGTGTAAGTGGAGATCACTGTC
CGCTGTCAGCCCAGATCTGCGGCGCTGCCTGCCGCACATACTTGCTTCTT
CCAGCTGGACGTGCCTGATTACGACAAAAAAGCAGTGCTCGAGCACAAGC
TTCTGCAGGCAATGAATAACACGGCCTCGTTTGATGTGGTGTAA
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