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Homology
BLAST of mRNA_H-paniculata_contig10976.630.1 vs. uniprot
Match: D8LE37_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE37_ECTSI) HSP 1 Score: 525 bits (1352), Expect = 1.360e-171 Identity = 256/354 (72.32%), Postives = 299/354 (84.46%), Query Frame = 1
Query: 862 GQMVLVAEGDDFIADYGDERAQELKNVRRGRFTVRCIQGGDVRKTTLSNKIAAIDAYLRLTLGKHKRAPTKKSKVVKKSGVNPTFDSELLSFDMVEPEEFIVGGDVSLSVELWDDSAWADDLLASVELSALRFMDPDAVPTEEWLPLSAPSRRIKDQMKVQVEIKFEPALVGMFVLTLHEGEGLGASDPVLRPNPYVLAILGEKYQKRSRAVKGGGHTPFFRQEEILLWVDKENWINDLHLQVRSEDIGTDGELGEATISVLHAMSLPPDKPTERHLDLTLEGQPSGQLFVKTVFLPAGKLTFVCESARQLRETSVAGRMDSFVVFKAEGQAVSLSRKTGVDKDGGIDPKWDEV 1923
GQ+V V E D A G A++L+ +RRGRF VRCI+GGDV+K+ LSNK +D YLR+TLGKHKRAPT+K+KVVK+SGV+P F+SE L FD+VEP+EF+VGGDV+LS+E+WDDSAW+DDLLASV+LSALRFM PDA+P+ EW PL APS RIKD+MKV VEI FEPAL+GMFVLTLHEG+GLGA DP RPNPYV+A LGE YQKRSRA KGGG P FRQEEI+LW+DKENW NDL LQVRSEDIGTD ELG A ISVLHAM +PP++ TER ++L LEGQP+GQLF K VFLPAGKL+FVCES R LRETS AGRMD +V FKA+GQAVSLSRKT VDKDGG+DP+W+E
Sbjct: 230 GQIVGVDEDD---ASEGGVAAKDLEVLRRGRFIVRCIEGGDVKKSALSNKTPTVDPYLRVTLGKHKRAPTRKTKVVKRSGVSPNFESEKLVFDIVEPDEFVVGGDVTLSIEIWDDSAWSDDLLASVKLSALRFMHPDAIPSAEWFPLEAPSGRIKDRMKVLVEISFEPALLGMFVLTLHEGKGLGAHDPASRPNPYVVATLGEMYQKRSRAAKGGGSAPVFRQEEIVLWIDKENWTNDLQLQVRSEDIGTDAELGSAKISVLHAMDIPPEQATERKIELLLEGQPAGQLFAKCVFLPAGKLSFVCESGRGLRETSAAGRMDPYVTFKADGQAVSLSRKTKVDKDGGMDPRWNET 580
BLAST of mRNA_H-paniculata_contig10976.630.1 vs. uniprot
Match: A0A8J2SK96_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SK96_9STRA) HSP 1 Score: 248 bits (632), Expect = 8.530e-67 Identity = 130/342 (38.01%), Postives = 200/342 (58.48%), Query Frame = 1
Query: 901 ADYGDERAQELKNVRRGRFTVRCIQGGDVRKTTLSNKIAAIDAYLRLTLGKHKRAPTKKSKVVKKSGVNPTFDSELLSFDMVEPEEFIVGGDVSLSVELWDDSAWADDLLASVELSALRFMDPDAVPTEEWLPLSAPSRRIKDQMKVQVEIKFEPALVGMFVLTLHEGEGLGASDPVLRPNPYVLAILGEKYQKRSRAVKGGGHTPFFRQEEILLWVDKENWINDLHLQVRSEDIGTDGELGEATISVLHAMSLPPDKPTERHLDLTLEGQPS---GQLFVKTVFLPAGKLTFVCESARQLRETSVAGRMDSFVVFKAEGQAVSLSRKTGVDKDGGIDPKWD 1917
A D A + V+ GR +RC++ +V + + IDA++R TLG+HK+AP KK+K+ ++S +P FD E + FD+V+P +++ GD+ L++EL+D +AWAD+L+ + +S LR+M +A E + L P D E FEPA+VG V TL+EG L D V + +PYV LG+ K+S+ + GG P+F +EE++LW+D W DL +QV ED+G D +G++ + +L M++PP E+ +L + G+L +K FLPAGKLT C SA+ LR GR D +V+F G+ + +T VD+DGG +P WD
Sbjct: 390 APEADIDAHLKRTVKAGRLRIRCVEAHNVHRRGSAPTKTKIDAFMRFTLGRHKKAPRKKTKIYRRSNHHPIFDDEEIRFDLVDPSDYVANGDIDLTLELFDQNAWADELICAGNISILRYM-VEAGGVVETVSLKVPGEDRADTTFTG-EFTFEPAVVGTCVFTLYEGRNLANMDSVGKQDPYVKLTLGDT-TKQSKTCEDGGTDPYFEEEELVLWIDDTAWTEDLLVQVYDEDVGLDDLIGQSHVPLLPYMAVPPQHAKEQVFELFNKVDAKKHRGELLMKLQFLPAGKLTIRCLSAKGLRNRDTLGRQDPYVIFTTSGECHRIQERTHVDQDGGTEPTWD 728
BLAST of mRNA_H-paniculata_contig10976.630.1 vs. uniprot
Match: A0A482RV33_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RV33_9ARCH) HSP 1 Score: 209 bits (533), Expect = 2.240e-57 Identity = 118/342 (34.50%), Postives = 194/342 (56.73%), Query Frame = 1
Query: 937 NVRRGRFTVRCIQGGDVRKTTLSNKIAAIDAYLRLTLGKHKRAPTKKSKVVKKSGVNPTFDSELLSFDMVEPEEFIVGGDVSLSVELWDDSAWADDLLASVELSALRFMDPDAVPTEEWLPLSAPSRRIKDQMKVQVEIKFEPALVGMFVLTLHEGEGLGASDPVLRPNPYVLAILGEKYQKRSRAVKGGGHTPFFRQEEILLWVDKENWINDLHLQVRSEDIGTDGELGEATISVLHAMSLPPDKPTERHLDL----TLEGQPS--------GQLFVKTVFLPAGKLTFVCESARQLRETSVAG---RMDSFVVFKAEGQAVSLSRKTGVDKDGGIDPKWD 1917
++ +GR ++CI+G D+R ++ +D Y+R LG +R K ++V +K P F++E++ F++ +P ++I+ DV L VE+W+ S ++L+ V +S +RF V E LPL S + MK+ +EI FE A G+ LT++EG GL DP+ R +PY+ LG+ Y+KR+++VK GG P+F ++++L+WVD ENWI DL +++ ED + + S+L M + P+ E +L ++ + GQL ++ FLPAGKLT + E A+ L G R+D +V EG+AV + +++ DKDGG DP W+
Sbjct: 22 HLGQGRLVLKCIEGMDIRMKDDPDRNPRLDPYIRFRLGAAERHAWKSTEVYRKQTTRPNFNNEIVYFNVTDPVQYILDEDVVLCVEVWNKSMTKNELIGGVTMSVVRFFKQPFVSYTEKLPLYY-SGATRSNMKLVLEICFEEARRGIAELTVYEGSGLRNIDPLGRQDPYIQFSLGKHYKKRTKSVKNGGTDPYFDEDKVLMWVDSENWIEDLQVEILDEDTKEEKVIAMTAFSLLPYMKVHPNTAKEDTYNLFYYELIDPKDDSEKRQVFCGQLIMRVRFLPAGKLTIMVERAKGLLLPENIGTKERLDPYVSLTLEGEAVQIVKRSPADKDGGTDPVWE 362
BLAST of mRNA_H-paniculata_contig10976.630.1 vs. uniprot
Match: A0A7S3M2M7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2M7_9STRA) HSP 1 Score: 215 bits (548), Expect = 1.080e-55 Identity = 123/346 (35.55%), Postives = 191/346 (55.20%), Query Frame = 1
Query: 934 KNVRRGRFTVRCIQGGDVRKTTLSNKIAAIDAYLRLTLGKHKRAPTKKSKVVKKSGVNPTFDSELLSFDMVEPEEFIVGGDVSLSVELWDDSAWADDLLASVELSALRFMDPDAVPTEEWLPLSAPSRRIKDQMKVQVEIKFEPALVGMFVLTLHEGEGLGASDPVLRPNPYVLAILGEKYQKRSRAVKGGGHTPFFRQEEILLWVDKENWINDLHLQVRSEDIGTDGELGEATISVLHAMSLPPDKPTERHLDL--TLEGQP----------SGQLFVKTVFLPAGKLTFVCESARQLR--ET-----SVAGRMDSFVVFKAEGQAVSLSRKTGVDKDGGIDPKW 1914
K + RGR ++RCI+G D+++ +KI D +++ LG +R P K+++ +K NP F EL+ FD+ +P +++ D+ L +ELW+ S+ ++L+ SV +S +RF V E +P+ P + MK+ +EI FE A GM +TL E L DP+ + +P+V LG Y KRSR+VK GG P+F +E+ILLW+D++NW+++L + V ED D +G S+L M P+ E DL ++ P SG++ ++ F+PAG LT E A+ L ET RMD + EG+AV + ++T DKDGG DP W
Sbjct: 387 KALSRGRLSIRCIEGFDIKRKDDPDKIPRNDPFIKFRLGVAERHPWKQTETQRKQDQNPKFRDELIFFDVTDPAQYVFQEDLQLCIELWNKSSTKNELIGSVTMSVVRFFKQPFVSYTEKVPIYYPGAT-RTPMKLSLEIVFEEARSGMMQITLFEARSLRNIDPMGQQDPFVQLALGRHYIKRSRSVKNGGTNPYFEEEDILLWLDQDNWVDNLKVSVLDEDAKEDKPIGVTEFSLLPYMKQRPEDAREDTFDLFYMMQTDPKDDTEVKEVASGEIAMRIRFMPAGSLTVYIERAKDLAFPETHKPLPGEVVRMDPYASLTIEGKAVKMIKRTPADKDGGADPVW 731
BLAST of mRNA_H-paniculata_contig10976.630.1 vs. uniprot
Match: A0A2R5GMF7_9STRA (Calmodulin-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GMF7_9STRA) HSP 1 Score: 142 bits (357), Expect = 1.560e-31 Identity = 102/356 (28.65%), Postives = 167/356 (46.91%), Query Frame = 1
Query: 931 LKNVRRGRFTVRCIQGGDVRKTTLSNKIAA--IDAYLRLTLGKHKRAPTKKSKVVKKSGVNPTFDSELLSFDMVEPEEFIVGGDVSLSVELWDDSAWADDLLASVELSALRFMDPDAVPTEEWLPLSAPSRRIKDQMK----VQVEIKFEPALVGMFVLTLHEGEGLGASDPVLRPNPYVLAILGEKYQKRSRAVKGGGHTPFFRQEEILLWVDKENWINDLHLQVRSEDIGTDGELGEATISVLHAMSLPPDKPTERHLDLTLEGQP----------------SGQLFVKTVFLPAGKLTFVCESARQLRETSVAGRMDSFVVF--KAEGQAVSLSRKTGVDKDGGIDPKWDEVS 1926
L + G+ V ++ + K + I ID YL+ TLGK K+APT K +V+K G + F+ +++ F++V+PE F GDV+L+ ++ + + AD LA E+S E L RR D ++ V++ ++F PA +G ++ EG + + + + +PY + ++ +RS+ +K GG F EE+ LW+ W LH EDIG+D +G ++L M+ D T D G+ SG++ ++ F PAG L AR L + GR D ++V+ K+ + +T D DGG DP+WDE S
Sbjct: 70 LPKLVPGQLVVEVVEAYGLSKDEAAAAITQTRIDPYLKCTLGKQKKAPTHKGRVLKNQGKDVPFNEKMV-FNLVDPEPFASEGDVTLTFKIMNSNVLADTTLAEAEISVSGLFVNFQHEGEYRLFYR---RRKSDPLQPAGGVKLRMRFYPARMGYLLVHCMEGRKMKNMELMGKQDPYCKFEMLDQKPQRSKTIKNGGTDCSFDGEELRLWLKSNTWTEQLHFSCFDEDIGSDDLIGARNFNLLEFMT---DASTMEEFDQEGMGRIHEEWYEIFQGRNMDKLSGEVRLRFQFYPAGTLVIQSIEARHLVDKDTMGRQDPYIVYMMKSNYDTSNFKMRTKTDTDGGTDPRWDETS 418
BLAST of mRNA_H-paniculata_contig10976.630.1 vs. uniprot
Match: A0A7S2G627_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G627_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.370e-27 Identity = 67/181 (37.02%), Postives = 106/181 (58.56%), Query Frame = 1
Query: 1024 DAYLRLTLGKHKRAPTKKSKVVKKSGVNPTFDSELLSFDMVEPEEFIVGGDVSLSVELWDDSAWADDLLASVELSALRFMDPDAVPTEEWLPLSAPSRRIKD--QMKVQVEIKFEPALVGMFVLTLHEGEGLGASDPVLRPNPYVLAILGEKYQKRSRAVKGGGHTPFFRQEEILLWVDKE 1560
D YL TLG+ K+AP +K+ +KK+ P F E L D+ E +FI+ D+ L ++L D + +++++L S +S L F+ P + L P + D M+++VEI F ALVG+ V TL+ G L + + + +PYV+ LGE K+S + GG P+FR+EEIL+WV+K+
Sbjct: 9 DTYLMATLGRQKKAPAQKTATLKKANTAPNFKGEQLILDIDEIRKFILDDDIELRLDLMDVALFSENVLCSARISMLPFIMKPNKPVQRKYDLLIPGG-VNDLNPMEMEVEIVFHKALVGLTVFTLYRGVNLKNEELMGKQDPYVVFSLGEANTKKSAVITDGGVNPYFREEEILVWVEKK 188
BLAST of mRNA_H-paniculata_contig10976.630.1 vs. uniprot
Match: A0A7S2G912_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G912_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 1.850e-11 Identity = 32/71 (45.07%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 1711 QPSGQLFVKTVFLPAGKLTFVCESARQLRETSVAGRMDSFVVFKAEGQAVSLSRKTGVDKDGGIDPKWDEV 1923
+P G++ +KT FLPAG+L+ C R L E VAG+ D ++VF +G A +++RKT +D DGG++P W+E
Sbjct: 22 KPHGKIEMKTTFLPAGRLSIECIEGRNLAERDVAGQQDPYIVFTLKGMASTITRKTKIDTDGGVNPSWNET 92
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 527.7 |
| Seed ortholog evalue | 7.6e-147 |
| Seed eggNOG ortholog | 2880.D8LE37 |
| KEGG ko | ko:K02183,ko:K19909,ko:K19938 |
| KEGG Pathway | ko04014,ko04015,ko04016,ko04020,ko04022,ko04024,ko04070,ko04114,ko04218,ko04261,ko04270,ko04371,ko04626,ko04713,ko04720,ko04722,ko04728,ko04740,ko04744,ko04745,ko04750,ko04910,ko04912,ko04915,ko04916,ko04921,ko04922,ko04924,ko04925,ko04970,ko04971,ko05010,ko05031,ko05034,ko05133,ko05152,ko05167,ko05200,ko05214,ko05418,map04014,map04015,map04016,map04020,map04022,map04024,map04070,map04114,map04218,map04261,map04270,map04371,map04626,map04713,map04720,map04722,map04728,map04740,map04744,map04745,map04750,map04910,map04912,map04915,map04916,map04921,map04922,map04924,map04925,map04970,map04971,map05010,map05031,map05034,map05133,map05152,map05167,map05200,map05214,map05418 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | Ca2 -binding protein (EF-Hand superfamily |
| EggNOG OGs | COG5126@1,KOG0027@2759 |
| COG Functional cat. | DTZ |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01009,ko03036,ko04131,ko04147 |
| Exons | 14 |
| Model size | 1950 |
| Cds size | 1950 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10976.630.1 >prot_H-paniculata_contig10976.630.1 ID=prot_H-paniculata_contig10976.630.1|Name=mRNA_H-paniculata_contig10976.630.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=650bp
GASPGRPPPGTPPGAPPGAGPRPPPSASPRSPPPRPPPGALPGKNHNNSP
QGSEVKVNVSKKTTILLPSQMRLDSVNVSGTPPREPPPGPPPGSPPNTET
GGEDSQQNRAKATDGESEGNPQPKATRSAPPSPKAPPGVPMGMVPPKSPP
AAKPVAPVIRAKAAEDEEKEKHEEQEDAAPASPERGADQQVADAKQSSPG
NPGKRRPPPGVPPGRTRAISPPSNRPTPPSAEELAKLDSEKEEEAKQLQA
AEKVVEESEEEAPPPPPEGLPPAEEFSDDEDDDDTPGGQMVLVAEGDDFI
ADYGDERAQELKNVRRGRFTVRCIQGGDVRKTTLSNKIAAIDAYLRLTLG
KHKRAPTKKSKVVKKSGVNPTFDSELLSFDMVEPEEFIVGGDVSLSVELW
DDSAWADDLLASVELSALRFMDPDAVPTEEWLPLSAPSRRIKDQMKVQVE
IKFEPALVGMFVLTLHEGEGLGASDPVLRPNPYVLAILGEKYQKRSRAVK
GGGHTPFFRQEEILLWVDKENWINDLHLQVRSEDIGTDGELGEATISVLH
AMSLPPDKPTERHLDLTLEGQPSGQLFVKTVFLPAGKLTFVCESARQLRE
TSVAGRMDSFVVFKAEGQAVSLSRKTGVDKDGGIDPKWDEVSGQSRMLQ* back to topmRNA from alignment at H-paniculata_contig10976:42..8417+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig10976.630.1 ID=mRNA_H-paniculata_contig10976.630.1|Name=mRNA_H-paniculata_contig10976.630.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8376bp|location=Sequence derived from alignment at H-paniculata_contig10976:42..8417+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTGCCTCTCCAGGTCGACCACCCCCCGGCACCCCACCAGGCGCACCCCC
GGGCGCAGGCCCTCGTCCCCCCCCCAGCGCAAGCCCGCGCTCTCCCCCCC
CCCGCCCACCACCGGGCGCTTTGCCAGGTAAAAATCATAACAATAGCCCG
CAGGGGAGCGAGGTAAAAGTGAATGTGTCCAAGAAGACCACGATTCTCCG
TCTCCCGAGAATATGTTCCCCTACGGCATTATTCTGTGGTACGTCGAACT
GTTTCCATTCCGACGGAGTCGACAGGGCGTCTTTGTCCATCGCGAAGAGG
TTGTATCCCATCGGCCGTCTTCGTGGTGGAGATACACTCGCGGTCGCTAT
GTCTCTAACCTAAGCTTTTGTCGTTGAACTTGCACCGTCGGAACGGCTTC
TCAAAGTTCCCTCTCAAATGCGACTTGACTCCGTGAACGTTTCAGGTACT
CCACCACGCGAGCCCCCACCGGGCCCCCCGCCGGGCTCACCGCCGAACAC
CGAAACAGGAGGGGAGGACAGTCAGCAGAACCGTGCAAAGGCTACGGATG
GAGAGTCAGAGGGAAACCCACAGCCGAAGGCAACGAGAAGTGCTCCTCCA
TCACCGAAGGTATCATATTAGAACTCTATCTGATAAAATTCTCAGGTGAA
GGGTGCCATAGTGTATTGTGAATGAGAGGTTGGCCTGTTGAGCCAGCTGG
GCGACTGTTGCGTGCTAAAACAACCCTAACTACTCGAGTATATGACCGTC
TCATCTCGGAGAGTGCTGTACGCTGAGAACTGATTTCTTTGTAGTCCCTG
AAAAGCGAGGCACAATCCCGAGCATGGGTTATTGCAACATATGATGATGA
AATTAAAGACACTGCACGAAAGCAACGTCGGTGTACGCGTGTGCGATTGC
AGTTATCAACGGCTGCGGACCTACCTCTTTTACTTTCTTGGTAGCGTTGA
GCAAAAACTCACTAGCGGTGAGTCTTTCTCGCACTCTCTCCCGATCGAAT
CAAAGTATAGAGTTTTTCGAATGGAGTATATTCCCTCGGGTTTGCAGCGA
TCGTGGACTAGCATCTGCGGATCCATTACCAACCTCCGAGAGGTACAACA
TACTGACTCGCCCCTCCGACCATCCGGGCTTGCTAATTAGAGAATAGGCT
GTGGCTGTTTACATTTTCCTGTCGGTCACACTGAACACAAATGACACCTG
CCCGTAAAAGTATCACGACGTGTTTGGTCAAGACTACCACGAGGTTCTGC
CATAATGGATTGCAGCGAGTAGTGCGTAGGGTCTTCAGCGTGCGAGTCCA
CCACTCACGAGTACGGCGCGTGATCGTTTCTTGCCGCTCTAGCTTAGGGA
TATCCGAGAAAACTATTGGACATGCTACTGTTGCTGCTATTGTTGTTGAT
GTTATCGTTATCGTCATCGTTATTGTTATTGTTATTGTTATTGTTATTGT
TATTGTTATTGTTATTGCTATTGCTATTGCTATTGTTATTGTTATCGTTA
TTGTTATTGTTGTTGTTGTTGTTGTTGTTGTTATTGTTATTGTTGTTGTT
ATTGTTATTGATATTGATATTGTTATTGTTATTGATATTGTTATTGTTAT
TGATATTGTTATTGTTATTGTTATTGTTATTGTTCCTGCTATTTGGAAAC
CTGCATTGTCATTTCTTGCTGTCTTCGCACAACCCACTTTCTTTTCAAAG
GCACCACCTGGCGTGCCTATGGGTATGGTGCCGCCCAAGTCCCCACCAGC
AGCCAAGCCCGTCGCTCCGGTCATTCGTGCGAAGGCCGCCGAGGATGAGG
AGAAAGAAAAACACGAAGAACAAGAGGATGCGGCTCCGGTCAGTACCACC
TTAATAGAGGGGGCCCGTTTGCGATAGCCACCAAAAGCTGTTACGAAGAT
CGAGATTTTGCCGGCCAGGAGCACGTACTGGCTGTGTTGGGTCAGCATGT
GCTACTTTCGGCATTTTATGTCGCATTTCATTCTTATGCCTTATGAACTA
AAATTGAAGACTACCATGTTTATGAGCAAGGTAAATGAACGAGGGTGAGT
GTACTTCGGGGAGCATTTTTAGTACAAGGCTTGTTTAGTGTTCTATCCTC
TAAATACTGCTGAATCACGGGAAAAATATATCCGTCCGTGACATAGCTCT
AGAGATTCATATAGTTTCTTAGCTCTTAACGGAAATCTGTGATGCTCACA
GCTGCCCTAACGAACGGTGACGTTCACTCGCTTTTGCCGTGGAACACAGG
CTTCTCCTGAAAGAGGAGCGGATCAGCAGGTGGCAGATGCGAAGCAGTCG
TCACCCGGTAATCCCGGCAAACGTCGCCCTCCCCCAGGAGTACCCCCGGG
TAGGACTCGAGCGATTTCCCCGCCCTCGAACCGGCCCACCCCTCCATCAG
CTGAGGAGTTAGCGAAGCTGGATTCTGAGAAGGAGGAGGAGGTGATCGAC
AGGGGGGTATTGTACGTTAAGGATACTGTGCTCGCGCGTTAGAAGTTATT
TCACGGATACTAACACTGCTTCAGCGTGTGAATGTACTATTTTCAAGAAG
CCCCCCCAAAACTCTCCTGCTTAGAGAGTAGCGCGGCTACTTCTATATTG
TTGTGGCTCCTTAAGGTTGGGTTCTGTGCTGGTTAGGTATCCCTTAATTA
TTTGTCTTTAAAGTACGTTATACACACTCGTTGCATATTTTATCGATTTG
GTATCGTAAGGCAAAGCAGCTACAAGCGGCTGAGAAAGTCGTAGAAGAAA
GCGAGGAGGAAGCACCACCGCCGCCACCTGAAGGGCTTCCCCCAGCCGAA
GAGTTCAGTGATGATGAAGACGACGATGATACCCCAGGAGGTGCGCGACA
AAACAGAGACAAATGAGCGTAAACACGCTACACGGTATTTTCCATTTTCC
AACTGAAGCGGTTGATTTGATTTCGATGTAGCCTTGGCGTGTATCTTTGT
CTTTACAGTCCTAATAGTCTAATAATAGACCTGTCTAGGGTTTAAATGCA
GGAATACGTTTAGCACCGTTGTAGCGCGACTATGAGTTGTGGTATATCTT
TAATTGGAAGCCACTACGACGCTAGAAATGGCGACGAAACACAGCATTAA
TCAGTCGAAATTACAGAGTCGATTGAACGCCTATCTGCTTAACGCGATCA
AGAAATTGTCTGCTGCATACGATAAAAAAATACTGAAAAGAAAATATCTC
CGTTTCCTGTGAATTTGCGAGTTTTTGCGAGAGATGCGTATACCTTTCGT
GGTCAAGATGTCTTTGTGAGGAACCCCGCTGACATGCGGCATAAAGCTAC
TTTTGACACGCTCTTTCACTCGTTGCAACACAATGTCTAAATAACCTGTC
ATTATCTCAGACAGGTAAATGACCAGCGCAGCAACTAACAGTTTTCAGGA
CGACCCTACCAAGATGGCAACAAACCCCCGACACGTGTCACTGGGTGTAC
CCCTTTGACATTTTCACTTATATTGCGACCCGCGGGCAGGTCAAATGGTC
CTAGTAGCGGAAGGCGATGACTTTATCGCTGATTATGGGGACGAGCGAGC
ACAAGAGCTCAAAAACGTGCGTAGGGGAAGATTCACAGTCAGGTGACATG
CACAGTATGGTGGGCGCACTACACGTTAGGGTGCTTTATGACATGTTGGA
GAGTAATTAGTGAGGTGGTTCGACGGGGTAGTAATGTTATGTGGTCCCAG
GGAAGCACGTATTCGACATCCGCCGTGACGGACGGGAGAAAGGGACGCCA
CGGACGGAGGCACTGCATTCATTCAGTACCAGTCTCCCTCCTCCGATCAT
TACGTACACATCATTAGATCGCCTTGCCCATACTACTCGTTGCTCGCTAG
ATGCCAGGACATGGACGAAACGCGCATTAGTTTTGTTTATCATATTCTAT
GAATATAAGTGGTGTTCATCATTCCAGATCTTGGGAGAAAGTACGGATAG
TGGAGAGACAAGCACAAGTTCTCATGTTGCGTTTGAACGATGGTGTGCAT
GCCACAAAGACAGGAATATGACGGACCAAATGACGATCAATTCCTATGCT
CGTGCTTTTACCAACGCGTTTTTAGGTGTATCCAAGGCGGAGACGTTCGC
AAGACTACCTTGTCCAACAAGATAGCTGCCATCGATGCCTACCTTAGACT
CACACTGGGCAAGCATAAGAGGGCGCCAACGAAAAAGTCGAAGGTAGTCG
CTAAAATGCCCACCGTCTGTCCCCACAGATACCCGGGAGGAATCGCATTC
AATGTTTCTTGCGCTATGATTAGTTTAAACTCCAGAGGGTCGCACGATAT
CTACTAGAAGATAAGTAATGCCCAAGTTCAACGATAGAGAGGAAAAGGGA
GGAGCCGGTACAATATATTATCCCCGCCTAGATAAGATAATGTCTGAGGT
GATCCGCTATTCGTGTAGAGCTAAGATAGCAGAGCTGAACTTTGAGGGCT
ACATAGCGCCCCTTCCTTTCTCATGAAAATCGCTCAAATACCAACGTAGG
TGGTGAAAAAGAGTGGCGTGAACCCTACGTTCGATTCGGAGCTATTATCT
TTTGATATGGTCGAGCCGGAAGAGTTTATCGTAGGAGGCGACGTTTCGCT
GTCCGTGGAGCTGTGGGACGACAGCGCATGGGCTGACGATCTGCTGGCAT
CAGTGGAGCTCTCCGCTCTTAGGTGATCTTTGTTGCGCATGGTACCCTTC
ACCTCGACCGGATACTGCAGTGAGCAACAGAAAATACAATTTGTTGCAAG
AAAGTACGTTGTCATTTGGATGCCGCGGGGGGTGAATAGAGTGCAGGGAG
GAAGCGCATGAGAAATATCTCTTGATGCGTCAGGAGTTTCTTTTTCCAAT
CGATCCAATTCAGGTCAAATCAAAGATGATTAAAACCGTTGTGAAATGTG
TGATATTTTGGTTCTGCGAGAACTGCACATCTGAAGAGGGTCGATCAAAT
TGCATGACTAGCGATCATCGTGCCTCGGCATTTATTCAATATTGCACAAA
CTTCAAGTGCAGGTTCATGGACCCTGACGCAGTGCCGACGGAAGAGTGGC
TACCTCTCAGCGCACCCTCCCGACGAATCAAGGACCAAATGAAAGTTCAG
GTGCATTGATATATCGAATACTGGGGTTGGCTGTTTAGCTTGCTCTTCGC
CAGTGTGCCTCCTACTACAGCAAATTGATGCCAAAATAGTTGTCCGCATG
AAGACCGGGTGCGTATCATTTGCAGCCGGATGAAATTTTTCAACCCACTG
CGTTTTCTCTGGTGGATACTGAATACACATTAAAGACATTTAATCAATCG
AAATTTGGCCAAAGTATTCGATTTGTGTGTTGTCTAGAAGACCTCTTAAT
GCCATGCATCACCCATCTATCTACTCTCCTACGCCCTCGGTTGTTGATGG
ACTTGGTGGGCTCGATCGACTTCAGGTGGAGATTAAATTTGAGCCGGCTC
TGGTGGGAATGTTCGTGCTAACCCTGCACGAAGGGGAAGGTCTCGGAGCA
AGCGATCCTGTGCTGAGACCGAATCCTTACGTCTTAGCCATCTTGGGAGA
AAAGTAAGAAAACGGCTGAACGGACCGGCAGGTGCTTGAAATGCTCCTTA
TTTGTCAAATAAAGCGTACAAAACACCGCAAGCATTAACATCTGACTCGT
ACAGCATTGCAAGCTAACTAACTAACTATCCAGCTTCGTAGCATTATTTC
AGCCTTTAGGTCATTATCTGAATCTTTGACACATCGCGCGCGTTTTACGT
GTTCTGGTTTTGTCCCTTATGTGGTAGGGTATACATGTGATTTTTTTCCT
CTTGTTGATCCATTGTTAATTCCTTGTTGCTGAGTCAACAGTCATGTTGT
ATACTTCAAAGTATACATGTACATACTACATGTGATGTCCTCAGAATTGA
CTAGACATACTTTGCCTTCAAACTCGATAATGGCGGTCTGGAAACGTTGA
GCATCAACGGGAAACCGGAAGCCATGTTACCCGCGATAAGCTGTATTTCA
ACACCGTATGTCCTCATTCCAGTGGGTGCAGAAATATCGATGTAGCGGTG
CTTGGTAAGATACTAGTCTCCTTACCCGACTTGGCAGCAGAAAATGCCGG
TAAGGGAGGGATTGGTTGATGGAAATGGATTCATCGTAGTATATAAATTG
CTCCCTCATCCTACCCATGCGAACGAAGTAACGTGCTCTTGTCCCCCTTT
TCCCCGCCAGTTGTCGCTGGGCTGACTCGTTTAGATATCACAGTGTGGAA
TGGTTTTAGTACAGCTAGGGGATGGTTTTCATCGTCTGTGGTTTTTGTGC
TATGAGGAACAATGGGATTGGGAAGGGTTAATCTGCTCACGAGCGTGTGA
ATGATGACCGGTAAACAAGACATGTCGGGATATCAGTGAAATGCCTCTGG
CTTCACTCTAAACACATCTACTTTCTCGTGCCATGTCTGGAGCATAACAC
ACGAGACTCTATTATAAGCGACACTTCCGAAGTGGACAGCGAAACGAGCG
TGCGCGGGTCAATCCAATCTTCCATAATTTTTCCTGCTGCAGGTACCAAA
AAAGAAGTCGAGCAGTCAAAGGGGGAGGGCATACACCGTTCTTCCGACAG
GAGGAGATATTGCTATGGGTCGACAAGGAGAACTGGATCAACGACCTACA
CCTACAGTGAGGAGGATGTAGCGTTTGTAAACAGCCTTTAAAATTTATGT
GCTGGCTAGTCTTGAGGCACACGCAAGATCTACCAAATAATTACCAACAA
ATCACGCGAGACTTAGTCGGCACCGCTTGTCCATTTTTCTAGTCCTTTTG
TCAGTACAAGAGAAAACAAAATCCACGATATCGATGGACCAACAAGGATC
GAAACCTACGTGAGTGAGATTACGGCACCGCTTCAGAGCACACGTCCAAA
CAAAAATAGAAAAACACATCGATACGTCCATTTACAACACGCCCCCCCCC
CCCCTGCTCACTAATACACGGAAATGTATTATTATCCACCACCTTACACG
TGGCTCTGGTACGATAACTCTACTCAGGGTTCGGAGCGAGGACATTGGAA
CGGACGGAGAACTGGGTGAAGCCACTATCAGCGTCCTGCACGCAATGTCC
CTACCCCCTGATAAACCGACGGTAAGAGCGCCATTCCACGTGCACCTACA
GTACCTCAGGAGATCTATCAAATGGTGGAGGCGACCAGACGATGTTTTAA
TGGCCTCCCTTCTCAGTGATTGTACGATAGTCCTTCGGGAATAGAGGCGG
TGGGTCGGAGGATCCAATAAAGTCACGATGTAGTGGCCACCTTAGTAAAC
ACCTTAAAAGGGTTAGTAATCACTCAACGTCTGTCGAGGACAGTTAACCT
CATTTCATATTAACCGATGGAACATTCACCACGCATCTCTCAGAATATTT
TACCTCTCTCTCTATAGCAACACTCGCCTTTTCAGGTCGTTACTTTGTCT
ATCCCCTATATCCTAGTATTGTTGTCGCTTTCGTTTTCCAATCCCATGGC
TGATGGTTCAAGCAAGTCCGGACGGAATACATGGGAAGTTTTGTTTATCC
TAGACTGAGAATAAATCTAATATCAGGCACGACGTTTTTGCCCCTGGTTT
ACAGACACTTTGTGTCAACCTTGTAAGCGACGTTTACCCGTGAAACGCCG
TTTTCCGATATTCACGCTTTCCTTGGTTCCATCAGTGCATCAACATCTCT
TCATTCGTCTGTTTTGGCAGGAACGACACCTTGATCTTACGCTGGAGGGA
CAGCCATCCGGACAGCTTTTTGTGAAGACGGTCTTCCTGCCTGCCGGGAA
GCTTACGTTCGTGTGCGAATCAGCGCGACAACTCAGGGAAACTTCGGTGG
CCGGAAGAATGGACTCTTTCGTGGTTTTCAAAGCCGAGGGGCAGGTGCGT
CGTCTAGCATCCACACTTTACATTGGCTGTGGATTATTGACTAATTTCGA
CGACTTTTTTGCCCCCCGCGAAGGAGCTCATGACTCGTTTTTCAACAAAA
GTTCGCAACTGAAGTTTTTTTCTCTTTTTCAGACACCTTTTCAAGATAGC
GGTCTCATGCTCTTGGCTAGAGCTCCCCAAGGTTTTTACTTCATTGTGTA
GACAACAAATCTTCACTACTGTAGTGCTCGATGCGCTCTGTATAAGATGC
TACCGACTGGAATCCAACACGACGACGTTTTGCTTACTCTAGAACACTCG
GCACCCTAACGCAAAGGCACCGCTATTTTCCCTTGATCTCGCGTTTCTCG
CCTTGTACCTATCGTCCCCGTGCACGGCAGGCCGTGTCTTTGAGTCGCAA
GACAGGAGTGGATAAAGACGGTGGAATAGATCCGAAATGGGACGAGGTGA
GTGGTCAATCCCGCATGCTACAGTAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig10976:42..8417+ >mRNA_H-paniculata_contig10976.630.1 ID=mRNA_H-paniculata_contig10976.630.1|Name=mRNA_H-paniculata_contig10976.630.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3900bp|location=Sequence derived from alignment at H-paniculata_contig10976:42..8417+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTGCCTCTCCAGGTCGACCACCCCCCGGCACCCCACCAGGCGCACCCCC
GGGCGCAGGCCCTCGTCCCCCCCCCAGCGCAAGCCCGCGCTCTCCCCCCC
CCCGCCCACCACCGGGCGCTTTGCCAGGTAAAAATCATAACAATAGCCCG
CAGGGGAGCGAGGTAAAAGTGAATGTGTCCAAGAAGACCACGATTCTCCG
GTGCCTCTCCAGGTCGACCACCCCCCGGCACCCCACCAGGCGCACCCCCG
GGCGCAGGCCCTCGTCCCCCCCCCAGCGCAAGCCCGCGCTCTCCCCCCCC
CCGCCCACCACCGGGCGCTTTGCCAGGTAAAAATCATAACAATAGCCCGC
AGGGGAGCGAGGTAAAAGTGAATGTGTCCAAGAAGACCACGATTCTCCTT
CCCTCTCAAATGCGACTTGACTCCGTGAACGTTTCAGGTACTCCACCACG
CGAGCCCCCACCGGGCCCCCCGCCGGGCTCACCGCCGAACACCGAAACAG
GAGGGGAGGACAGTCAGCAGAACCGTGCAAAGGCTACGGATGGAGAGTCA
GAGGGAAACCCACAGCCGAAGGCAACGAGAAGTGCTCCTCCATCACCGAA
GTTCCCTCTCAAATGCGACTTGACTCCGTGAACGTTTCAGGTACTCCACC
ACGCGAGCCCCCACCGGGCCCCCCGCCGGGCTCACCGCCGAACACCGAAA
CAGGAGGGGAGGACAGTCAGCAGAACCGTGCAAAGGCTACGGATGGAGAG
TCAGAGGGAAACCCACAGCCGAAGGCAACGAGAAGTGCTCCTCCATCACC
GAAGGCACCACCTGGCGTGCCTATGGGTATGGTGCCGCCCAAGTCCCCAC
CAGCAGCCAAGCCCGTCGCTCCGGTCATTCGTGCGAAGGCCGCCGAGGAT
GAGGAGAAAGAAAAACACGAAGAACAAGAGGATGCGGCTCCGGCACCACC
TGGCGTGCCTATGGGTATGGTGCCGCCCAAGTCCCCACCAGCAGCCAAGC
CCGTCGCTCCGGTCATTCGTGCGAAGGCCGCCGAGGATGAGGAGAAAGAA
AAACACGAAGAACAAGAGGATGCGGCTCCGGCTTCTCCTGAAAGAGGAGC
GGATCAGCAGGTGGCAGATGCGAAGCAGTCGTCACCCGGTAATCCCGGCA
AACGTCGCCCTCCCCCAGGAGTACCCCCGGGTAGGACTCGAGCGATTTCC
CCGCCCTCGAACCGGCCCACCCCTCCATCAGCTGAGGAGTTAGCGAAGCT
GGATTCTGAGAAGGAGGAGGAGGCTTCTCCTGAAAGAGGAGCGGATCAGC
AGGTGGCAGATGCGAAGCAGTCGTCACCCGGTAATCCCGGCAAACGTCGC
CCTCCCCCAGGAGTACCCCCGGGTAGGACTCGAGCGATTTCCCCGCCCTC
GAACCGGCCCACCCCTCCATCAGCTGAGGAGTTAGCGAAGCTGGATTCTG
AGAAGGAGGAGGAGGCAAAGCAGCTACAAGCGGCTGAGAAAGTCGTAGAA
GAAAGCGAGGAGGAAGCACCACCGCCGCCACCTGAAGGGCTTCCCCCAGC
CGAAGAGTTCAGTGATGATGAAGACGACGATGATACCCCAGGAGGCAAAG
CAGCTACAAGCGGCTGAGAAAGTCGTAGAAGAAAGCGAGGAGGAAGCACC
ACCGCCGCCACCTGAAGGGCTTCCCCCAGCCGAAGAGTTCAGTGATGATG
AAGACGACGATGATACCCCAGGAGGTCAAATGGTCCTAGTAGCGGAAGGC
GATGACTTTATCGCTGATTATGGGGACGAGCGAGCACAAGAGCTCAAAAA
CGTGCGTAGGGGAAGATTCACAGTCAGGTCAAATGGTCCTAGTAGCGGAA
GGCGATGACTTTATCGCTGATTATGGGGACGAGCGAGCACAAGAGCTCAA
AAACGTGCGTAGGGGAAGATTCACAGTCAGGTGTATCCAAGGCGGAGACG
TTCGCAAGACTACCTTGTCCAACAAGATAGCTGCCATCGATGCCTACCTT
AGACTCACACTGGGCAAGCATAAGAGGGCGCCAACGAAAAAGTCGAAGGT
GTATCCAAGGCGGAGACGTTCGCAAGACTACCTTGTCCAACAAGATAGCT
GCCATCGATGCCTACCTTAGACTCACACTGGGCAAGCATAAGAGGGCGCC
AACGAAAAAGTCGAAGGTGGTGAAAAAGAGTGGCGTGAACCCTACGTTCG
ATTCGGAGCTATTATCTTTTGATATGGTCGAGCCGGAAGAGTTTATCGTA
GGAGGCGACGTTTCGCTGTCCGTGGAGCTGTGGGACGACAGCGCATGGGC
TGACGATCTGCTGGCATCAGTGGAGCTCTCCGCTCTTAGGTGGTGAAAAA
GAGTGGCGTGAACCCTACGTTCGATTCGGAGCTATTATCTTTTGATATGG
TCGAGCCGGAAGAGTTTATCGTAGGAGGCGACGTTTCGCTGTCCGTGGAG
CTGTGGGACGACAGCGCATGGGCTGACGATCTGCTGGCATCAGTGGAGCT
CTCCGCTCTTAGGTTCATGGACCCTGACGCAGTGCCGACGGAAGAGTGGC
TACCTCTCAGCGCACCCTCCCGACGAATCAAGGACCAAATGAAAGTTCAG
GTTCATGGACCCTGACGCAGTGCCGACGGAAGAGTGGCTACCTCTCAGCG
CACCCTCCCGACGAATCAAGGACCAAATGAAAGTTCAGGTGGAGATTAAA
TTTGAGCCGGCTCTGGTGGGAATGTTCGTGCTAACCCTGCACGAAGGGGA
AGGTCTCGGAGCAAGCGATCCTGTGCTGAGACCGAATCCTTACGTCTTAG
CCATCTTGGGAGAAAAGTGGAGATTAAATTTGAGCCGGCTCTGGTGGGAA
TGTTCGTGCTAACCCTGCACGAAGGGGAAGGTCTCGGAGCAAGCGATCCT
GTGCTGAGACCGAATCCTTACGTCTTAGCCATCTTGGGAGAAAAGTACCA
AAAAAGAAGTCGAGCAGTCAAAGGGGGAGGGCATACACCGTTCTTCCGAC
AGGAGGAGATATTGCTATGGGTCGACAAGGAGAACTGGATCAACGACCTA
CACCTACAGTACCAAAAAAGAAGTCGAGCAGTCAAAGGGGGAGGGCATAC
ACCGTTCTTCCGACAGGAGGAGATATTGCTATGGGTCGACAAGGAGAACT
GGATCAACGACCTACACCTACAGGTTCGGAGCGAGGACATTGGAACGGAC
GGAGAACTGGGTGAAGCCACTATCAGCGTCCTGCACGCAATGTCCCTACC
CCCTGATAAACCGACGGGTTCGGAGCGAGGACATTGGAACGGACGGAGAA
CTGGGTGAAGCCACTATCAGCGTCCTGCACGCAATGTCCCTACCCCCTGA
TAAACCGACGGAACGACACCTTGATCTTACGCTGGAGGGACAGCCATCCG
GACAGCTTTTTGTGAAGACGGTCTTCCTGCCTGCCGGGAAGCTTACGTTC
GTGTGCGAATCAGCGCGACAACTCAGGGAAACTTCGGTGGCCGGAAGAAT
GGACTCTTTCGTGGTTTTCAAAGCCGAGGGGCAGGAACGACACCTTGATC
TTACGCTGGAGGGACAGCCATCCGGACAGCTTTTTGTGAAGACGGTCTTC
CTGCCTGCCGGGAAGCTTACGTTCGTGTGCGAATCAGCGCGACAACTCAG
GGAAACTTCGGTGGCCGGAAGAATGGACTCTTTCGTGGTTTTCAAAGCCG
AGGGGCAGGCCGTGTCTTTGAGTCGCAAGACAGGAGTGGATAAAGACGGT
GGAATAGATCCGAAATGGGACGAGGTGAGTGGTCAATCCCGCATGCTACA
GTAGGCCGTGTCTTTGAGTCGCAAGACAGGAGTGGATAAAGACGGTGGAA
TAGATCCGAAATGGGACGAGGTGAGTGGTCAATCCCGCATGCTACAGTAG back to top
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