mRNA_H-paniculata_contig1096.625.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1096.625.1 vs. uniprot
Match: A0A6H5KJ68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ68_9PHAE) HSP 1 Score: 256 bits (655), Expect = 1.840e-66 Identity = 238/638 (37.30%), Postives = 322/638 (50.47%), Query Frame = 1 Query: 1831 ARLEVEDTLLLANKELQRLQERLQEVQSSADPMRAECEYLTRQLEALRATAAADSSAAEDEIDQATTAMRI-AEQAEEAAREEIMFLRKELQQQEGEGARGGS------GTAGDKETGRGGGDADEGIGEREYDEEESGQAAKITVKDXXXXXXXXXXXPEEAEAIREIVEERDSLRNELQRARQEGGVRMAGLETQLADTXXXXXXXXXXXXXXXXXXXXXXXXXXTNYDALRLEMARMDASIQDAAELNTPSVSSFSPSPIRKSGGG----GGGSDFPIAHGPTRGAISERSGRDATAMGAGLGASVGNILRGRLWTGFGGGSXXXXVGGLEDGRSPTALATAGKQERGTXXXXXXXXXXXRWHGEQRPGGAEVLAAGPANTDRESFTRVRDNMMAKLKEAAIQPATRRSGSNDIENKGGSSDSSRREGEQSDAGSVGDAEGGREEEENEEKEPAAEVTGAFVGRMTSTGQGTDTGGIVGPVESSGSGPADDGFREEKKAASGKEDWAEETMDHPPPDYGIDSPVIRYLLHQWSSDPEKLRYLTLWLRCVTERRRVPDAFPAGLQLVGLAPEVKDGFLTLIIPMIRHMGGLPVWVHSRRVPLQ-------------DGEEGER--WDLRVKVELEG 3666 ARL VE+TLL+ANKELQRL+ + +E S+++ +R ECE L +E LRA A A + ++++ +TA+ ++AEE +E F R L+ E RGG G GD + G D G +EE G A+ K A R+I+ ERDSLR EL ++ XXXXX ++DALR+E+ARMDASI++A++ + + S S + + GGG GGGS A + +GRD ++GA +G +VG ILRG+ W+G+GGGS D + AG XXXXXXXXXXX AAG D+ S +RVR+NMMA+L+EAA REG+ + G A+G + ++ + + GA M T S +D G + +++W EE ++HPPPDYG++SPVIRYLL QWS+DP+K++YL+LWLRCV ERR+VPDAFP+GLQLVGLAPE+KDGFLTL+IPMIR GG+PV VHSRR P + DG E WDLRVKV+L G Sbjct: 527 ARLAVEETLLMANKELQRLKIKNEEALSASNGLREECEVLKATVETLRAAAVAAAGDGGNKLNDVSTAVATQTDEAEENEEKEGEFAR--LRAVVEEMKRGGDEVGVVRGCVGDVSSHDGRDPDDSGS------DEEEGDGARRHGKGR-------------ASTKRQILAERDSLRAELASEKEXXXXXXXXXXXXXXXXXXXXXDTQRRLYLRQSELETELEDLNAHHDALRVELARMDASIENASDASLRRIPSSSATSMVGRGGGRLRAGGGSV----------ASPKSTGRDPASIGAEVGGAVGGILRGKFWSGWGGGSVTSA-----DTNGGGSTGDAGXXXXXXXXXXXXXXXXXXXXXXXXXXKISAGAAGAGEADQRSISRVRENMMARLQEAA------------------------REGKAEQKETSGGADGVKNKDVGHANTNNSGLQGASGNNMEET-------------RSENKDVSDVGMAAAPRTV--EDEWVEENVEHPPPDYGLESPVIRYLLQQWSTDPDKIKYLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRRSPPEESAPAGAGTPAYPDGHSKETALWDLRVKVDLNG 1089
BLAST of mRNA_H-paniculata_contig1096.625.1 vs. uniprot
Match: D8LFB2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFB2_ECTSI) HSP 1 Score: 252 bits (644), Expect = 3.040e-66 Identity = 190/474 (40.08%), Postives = 251/474 (52.95%), Query Frame = 1 Query: 2314 IVEERDSLRNELQRARQEGGVRMAGLETQLADTXXXXXXXXXXXXXXXXXXXXXXXXXXTNYDALRLEMARMDASIQDAAELN---TPSVSSFSPSPIRKSGGGGGGSDFPIAHGPTRGAISERSGRDATAMGAGLGASVGNILRGRLWTGFGGGSXXXXVGGLEDGRSPTALATAGKQERGTXXXXXXXXXXX-RWHGEQRPGGAEVLAAGPANTDRESFTRVRDNMMAKLKEAA----IQPATRRSGSNDIENKGGSSDSSRREGEQSDAGSVGDAEGGREEEENEEKEPAAEVTGAFVGRMTSTGQGTDTGGIVGPVESSGSGPADDGFREEKKAASGKEDWAEETMDHPPPDYGIDSPVIRYLLHQWSSDPEKLRYLTLWLRCVTERRRVPDAFPAGLQLVGLAPEVKDGFLTLIIPMIRHMGGLPVWVHSRRVPLQDG---------------EEGERWDLRVKVELEG 3666 ++ ERDSLR EL +++ +R AGLETQLAD ++DALR+E+ARMDASI++A++ + TPS S+ S GG GGG + G A + +GRD ++GA ILRG+ W+G+GGGS +G T A AGK XXXXXXXX R +GE G AAG D +S +RVR+NMMA+L+EAA ++ G+ ++NK D G G + E KE TG+ V ++ G + +++W EET++HPPPDYG++SPVIRYLL QWS+DP+KL+YL+LWLRCV ERR+VPDAFP+GLQLVGLAPE+KDGFLTL+IPMIR GG+PV VHSRR P ++ +E WDLRVKV+L G Sbjct: 436 VMAERDSLRAELASEKEQASMRAAGLETQLADKEREAADTQRRLYLRQSELETELEDLNAHHDALRVELARMDASIENASDASFRRTPSSSATS------MGGRGGGR---LRAGGGSVASPKSTGRDPASIGAEXXXXXXXILRGKFWSGWGGGSV---TSADTNGGGSTGEAGAGKXXXXXXXXXXXXXREGGRGYGE---GKISTGAAGAGEADHQSISRVRENMMARLQEAAREGKVEQKETSGGAGGVKNK--------------DVGGANTDNSGSQGASGENKEE----TGSDVKHVSDVGMAAAPRTV-------------------------EDEWVEETVEHPPPDYGLESPVIRYLLQQWSTDPDKLKYLSLWLRCVIERRKVPDAFPSGLQLVGLAPEIKDGFLTLVIPMIRFTGGIPVLVHSRRSPPEESIPAGAGTPTSPDSHSKETALWDLRVKVDLNG 851
BLAST of mRNA_H-paniculata_contig1096.625.1 vs. uniprot
Match: A0A7S2DLI1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLI1_9STRA) HSP 1 Score: 121 bits (304), Expect = 1.200e-27 Identity = 61/146 (41.78%), Postives = 90/146 (61.64%), Query Frame = 1 Query: 3280 GFREEKKAASGKEDWAEETMDHPPPDYGIDSPVIRYLLHQWSSDPEKLRYLTLWLRCVTERRRVPDAFPAGLQLVGLAPEVKDGFLTLIIPMIRHMGGLPVWVHSRRVPLQDGEEGERWDLRVKVELEGGGFGAGMVEKGSQSRQP 3717 G + + + +G W +E+ HP P +GI+ PVI++LL W+SDP+KLRY++LWL + + + + FPAGLQLV L PE+KDGFLTLI+P++R G V V R EGE+W L++KV V++ ++S QP Sbjct: 18 GSSDRRDSDTGGSAWEDESTLHPVPPFGIEDPVIQHLLTNWTSDPQKLRYVSLWLTVLAGTKEIAETFPAGLQLVSLRPEIKDGFLTLIVPILRKSRGSRVSVKVR-------PEGEKWGLKIKVS---------SVDEAAESSQP 147
BLAST of mRNA_H-paniculata_contig1096.625.1 vs. uniprot
Match: A0A7S2SI89_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SI89_9STRA) HSP 1 Score: 119 bits (297), Expect = 2.640e-24 Identity = 58/114 (50.88%), Postives = 79/114 (69.30%), Query Frame = 1 Query: 3322 WAEETMDHPPPDYGIDSPVIRYLLHQWSSDPEKLRYLTLWLRCVTER---RRVPDAFPAGLQLVGLAPEVKDGFLTLIIPMIRHMGGLPVWVHSRRVPLQDGEEGERWDLRVKV 3654 W ET D+P P +GI SPVI++LL W+SDP+KLRY++LWL + VP++FP+GLQL+GL PE+KDGFLTLI+PM++H V VH+R E +RW L++KV Sbjct: 203 WRRETQDNPVPPFGIGSPVIQHLLASWTSDPQKLRYVSLWLSVLINEDPATPVPESFPSGLQLIGLKPEIKDGFLTLIVPMLKHRHEQCV-VHTRM------EGADRWGLKIKV 309
BLAST of mRNA_H-paniculata_contig1096.625.1 vs. uniprot
Match: A0A7S2DMV1_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DMV1_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.000e-23 Identity = 47/98 (47.96%), Postives = 69/98 (70.41%), Query Frame = 1 Query: 3280 GFREEKKAASGKEDWAEETMDHPPPDYGIDSPVIRYLLHQWSSDPEKLRYLTLWLRCVTERRRVPDAFPAGLQLVGLAPEVKDGFLTLIIPMIRHMGG 3573 G + + + +G W +E+ HP P +GI+ PVI++LL W+SDP+KLRY++LWL + + + + FPAGLQLV L PE+KDGFLTLI+P++R G Sbjct: 18 GSSDRRDSDTGGSAWEDESTLHPVPPFGIEDPVIQHLLTNWTSDPQKLRYVSLWLTVLAGTKEIAETFPAGLQLVSLRPEIKDGFLTLIVPILRKSRG 115
BLAST of mRNA_H-paniculata_contig1096.625.1 vs. uniprot
Match: A0A7S2SIB0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SIB0_9STRA) HSP 1 Score: 119 bits (297), Expect = 2.750e-23 Identity = 58/114 (50.88%), Postives = 79/114 (69.30%), Query Frame = 1 Query: 3322 WAEETMDHPPPDYGIDSPVIRYLLHQWSSDPEKLRYLTLWLRCVTER---RRVPDAFPAGLQLVGLAPEVKDGFLTLIIPMIRHMGGLPVWVHSRRVPLQDGEEGERWDLRVKV 3654 W ET D+P P +GI SPVI++LL W+SDP+KLRY++LWL + VP++FP+GLQL+GL PE+KDGFLTLI+PM++H V VH+R E +RW L++KV Sbjct: 655 WRRETQDNPVPPFGIGSPVIQHLLASWTSDPQKLRYVSLWLSVLINEDPATPVPESFPSGLQLIGLKPEIKDGFLTLIVPMLKHRHEQCV-VHTRM------EGADRWGLKIKV 761
BLAST of mRNA_H-paniculata_contig1096.625.1 vs. uniprot
Match: A0A662Y4D6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4D6_9STRA) HSP 1 Score: 100 bits (249), Expect = 1.720e-18 Identity = 51/128 (39.84%), Postives = 76/128 (59.38%), Query Frame = 1 Query: 3274 DDGFREEKKAASGKEDWAEETMDHPPPDYGIDSPVIRYLLHQWSSDPEKLRYLTLWL-RCVTERRRVPDAFPAGLQLVGLAPEVKDGFLTLIIPMIRHMGGLPVWVHSRRVPLQDGEEGERWDLRVKV 3654 D G R A + +W EE + HP P + +DSP + YLLH W+++ +K++YL WL + V R +P FP G++L L PEV+DGFLTL++P++R + HSRR +G DLR++V Sbjct: 282 DTGRRARASANAALPNWQEELVRHPTPHFDLDSPEVTYLLHAWTANVKKMQYLRRWLTQVVVTRGPLPADFPMGVELPRLPPEVRDGFLTLVVPLLRRQTEREILAHSRRY-----NDGFHTDLRLRV 404
BLAST of mRNA_H-paniculata_contig1096.625.1 vs. uniprot
Match: A0A225W8L9_9STRA (RxLR effector protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W8L9_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 2.500e-17 Identity = 52/132 (39.39%), Postives = 75/132 (56.82%), Query Frame = 1 Query: 3268 PADDGFREEKKAASGK--EDWAEETMDHPPPDYGIDSPVIRYLLHQWSSDPEKLRYLTLWL-RCVTERRRVPDAFPAGLQLVGLAPEVKDGFLTLIIPMIRHMGGLPVWVHSRRVPLQDGEEGERWDLRVKV 3654 P DDG R A + W EE + HP P + + SP + Y+L W+ + +K+RYL WL + VT + +PD FP G++L L PEV+DGFLTL++P++R + HSRR +G DLR +V Sbjct: 235 PQDDGGRARAPADADAVIPTWQEELVRHPTPHFDMQSPEVAYILRAWTKNIKKMRYLRRWLIQVVTTKGPLPDDFPMGVELPRLPPEVRDGFLTLVLPLLRKQTEREILAHSRRY-----NDGVHTDLRFRV 361
BLAST of mRNA_H-paniculata_contig1096.625.1 vs. uniprot
Match: H3GIT8_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GIT8_PHYRM) HSP 1 Score: 94.4 bits (233), Expect = 9.520e-17 Identity = 45/112 (40.18%), Postives = 69/112 (61.61%), Query Frame = 1 Query: 3322 WAEETMDHPPPDYGIDSPVIRYLLHQWSSDPEKLRYLTLWL-RCVTERRRVPDAFPAGLQLVGLAPEVKDGFLTLIIPMIRHMGGLPVWVHSRRVPLQDGEEGERWDLRVKV 3654 W EE + HP P + ++SP + Y+L W+++ +K+RYL WL + VT + +PD FP ++L L PEV+DGFLTL++P++R + HSRR +G DLR +V Sbjct: 245 WQEELVRHPTPHFDLESPEVAYILRAWTNNIKKMRYLRRWLIQVVTTKGPLPDDFPMAVELPRLPPEVRDGFLTLVLPLLRKQTKREILAHSRRY-----NDGFHTDLRFRV 351
BLAST of mRNA_H-paniculata_contig1096.625.1 vs. uniprot
Match: A0A8K1C2V5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2V5_PYTOL) HSP 1 Score: 94.0 bits (232), Expect = 1.820e-16 Identity = 42/112 (37.50%), Postives = 69/112 (61.61%), Query Frame = 1 Query: 3322 WAEETMDHPPPDYGIDSPVIRYLLHQWSSDPEKLRYLTLWL-RCVTERRRVPDAFPAGLQLVGLAPEVKDGFLTLIIPMIRHMGGLPVWVHSRRVPLQDGEEGERWDLRVKV 3654 W E+ + HP P + +DSP ++YLL W+ + +KL+Y+ WL V E +PD FP G++L L PE++DGFLTL++P++R + VH+R+ + D+R++V Sbjct: 271 WQEDLIRHPTPHFDLDSPEVQYLLQSWTQNIKKLQYIRTWLTHVVVETADLPDDFPMGIELPRLLPEIRDGFLTLVVPLLRKQTRREIQVHTRQY-----NDDYHTDVRIRV 377 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1096.625.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1096.625.1 >prot_H-paniculata_contig1096.625.1 ID=prot_H-paniculata_contig1096.625.1|Name=mRNA_H-paniculata_contig1096.625.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1263bp MSLRDAVVALRSLKAELEAIRKSKAEIEAVNHGLVEELRLAKERGQIHANback to top mRNA from alignment at H-paniculata_contig1096:16910..28729- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1096.625.1 ID=mRNA_H-paniculata_contig1096.625.1|Name=mRNA_H-paniculata_contig1096.625.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11820bp|location=Sequence derived from alignment at H-paniculata_contig1096:16910..28729- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1096:16910..28729- >mRNA_H-paniculata_contig1096.625.1 ID=mRNA_H-paniculata_contig1096.625.1|Name=mRNA_H-paniculata_contig1096.625.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=7578bp|location=Sequence derived from alignment at H-paniculata_contig1096:16910..28729- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |