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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Ec32 ortholog description | Domain of unknown function DUF1279 |
| Ec32 ortholog | Ec-21_006290.1 |
| Exons | 6 |
| Model size | 2293 |
| Cds size | 1134 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1095.620.1 >prot_H-paniculata_contig1095.620.1 ID=prot_H-paniculata_contig1095.620.1|Name=mRNA_H-paniculata_contig1095.620.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=378bp
MVALRDIRGVTRLLRQGLRCSRLCCFEKQPEKLSLASAMRMSSSMFRSDR
MSTRYSPALLGTCCRRPTPAAVLVSFRHVNSSERSLRTPDDEYLSDPILG
ERMVACAAQTLSPIEANITHRGEEKSLGTFVQLAGHVPMANVPNGRRRGT
MVNLPASKWSGIGERALHRDICTRLGGVALFATGPRRGGILPPGMKEKNT
GIKAADGEKTGIKAVDGEDDSGIKENVTGKEAGEDAVLGDMDALRGMSTL
ERLKYIKDKVALLYKRYFWVAFGTYWAIYISGFGIIYGALVTGLVDPGVD
TATAIATLADFLGLEGNETVSGYVQWAQDLALSNPEAEKAIMAFIGSEML
ELPRELSVLLLTVPIARALGKAPPKKR* back to topmRNA from alignment at H-paniculata_contig1095:8385..13393+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1095.620.1 ID=mRNA_H-paniculata_contig1095.620.1|Name=mRNA_H-paniculata_contig1095.620.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5009bp|location=Sequence derived from alignment at H-paniculata_contig1095:8385..13393+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGTCCTGCTACTGTACTCTCCGTGAGAATGGTGGCACTACGTGATATAAG
AGGCGTTACACGACTCCTTCGGCAAGGTCTACGATGTTCTCGACTGTGCT
GCTTTGAAAAGCAGCCGGAAAAATTGTCATTGGCAAGTGCAATGAGAATG
TCCAGCAGTATGTTTCGTAGCGACAGGATGTCAACCAGGTGATTGGGATT
GCTGACAGCTTTGAGATAGCCGGGCCTTACGTTCGGGCGATATCAGCACA
TAACGGGTGGTTTTTGTATACGTGTGTACCTTCCTTCGAATACTGTTTCG
CGCGTCCAATAAAAATACACTGACTGTGTATGCGCTTTCTTGACTTCATG
TATATGCTTGCTCTCTGAACCATTCACCCTAGGTCATCCGAGGGCTGATT
GTTGTACAACGCTGCAGTCTGAACCCCCGCTTGCTGTACTGTACTGACTC
GACGTTTTGGGTGCTTCTGTTCGCCGATTGAATTGCAGTTGGCCCATACA
TGTGTTTTTGATAGACCAGTCCGTATACCTTCATTGAATGCACGGATTAT
GTTCCAGATATTCGCCTGCGCTACTGGGAACTTGTTGCCGACGACCGACA
CCCGCGGCAGTTTTGGTGTCGTTTCGGCACGTCAACAGCAGTGAGCGGTC
ACTGAGGACACCAGACGACGAATATCTCAGCGACCCCATTGTGAGGATCA
AATTCATTCCCAGAAAGTTAGCGTGACCGAACGATTCCATATACAAGTGA
GATGTTGATGAGAACTTTGAAAGTTGAAAACACAATATTTGGGCCGCGTC
TCAGAACTCTTTTTCAGGTGTTGTCATTGTGGACTGGAATTGGGTTAGAG
CATTATCGAAGATGGAAGATTGTACGGCAACAAGTACCGTACTGTGTAGC
AGTTCGACCGTTCAGTGCTTTGTCAATTAAACTCCTCGTTTGCAGCAAAT
ACCTTTATCGGATGGGTGTGCCCTCTGCAGTGTGGTTTTCAAATTCTGTG
CTTGACCAGCATGTACTTGTACGTCTCTCAGATATTCTCGAGTACATCAT
GTCCATGTATACGAATGTTAGGTGGTTCTCCCATCTGGATCCTTGATTCA
GCCTGTGTGACACTGGCTATATTGGCGTAACGGTTGCGAATATTCTAGGA
ACATTCTCGGAGTTTTATATTGTTCTGATTGTTTGTTTCCTGTTACGAAT
CCGGTTCGTATCTACGTAGAATTTGGTTCGGATCCGTTTATTGTTAGTGA
TTGGAGGAGAGACATGAGGGAACTACCGTGTGTCCCCAATTCTTTCACTC
TGCCTCACAGTCCCACGCCACATAATGAAAGCTCCACAACTCTTGTCTTT
ACGCTCCCGCTACAAGCCCAATCCCGAGGAAGCCTCGAGATATCGAACAC
ATTAGTTAGAAACAAGCCTACGTCCCATGACCGTATCGAGGCCTGGGCAA
AAGTAACTGCACTGACCCTCCGCTGCTTTCTACCAAAATTGCTACGTGGG
TTTACGTGACTGACAAACCACCCAATCTTGTGTCTTCTCTCGACAAAACA
TGTGCAAAGAAGCTGGGGGAGCGGATGGTGGCGTGCGCAGCGCAAACTCT
GTCGCCGATCGAAGCCAATATCACACATCGAGGCGAGGAGAAGTCGCTTG
GAACGTTTGTGCAATTGGCGGGGCATGTGCCAATGGCGAATGTGCCAAAC
GGACGACGCCGAGGGACGATGGTGAACCTTCCGGCTAGTAAATGGAGTGG
AATCGGCGAAAGGGCTCTCCACCGTGATATATGCACACGACTGGGCGGTG
TCGCTCTCTTCGCTGTGAGCAGCGTTTCCTTTCATACGGTAGATGTGTAT
CTCAATGACAATCCCGTGTAAATGGGAGCGGTTGGGTGTATTGGACGGAT
TGGACTGTTTGCACCCCGGGCACATGCTTTGTACTTGATGAGTTTCGAAC
AGTAGGCAGGCCATATCTTCGTGTGCTCCGGACCACTAATGCACACACGC
AATAACGCGTCGGCAGCACGCGAACGATTGAAACACCGACTTGAGAGGGA
ATACATGAAGAGAAAATGATATGAGAGTTCACCCGCCAACCGCCAACGTT
TTCAAAATTATTTTTTCGCCGGTTGACCGGCGTGGACCGACAACGGGGGC
GCGTATCTAACAACAGTATGTTTATGTTTGCCTTTCTGGACGCAACGAGT
AGCACGTCGGCTTGAGCAATTTCCGAGTTGCCGTTTGTTGCGTGTCCTTT
TTCAACGAACTCATCTAGACGGGACCGAGACGTGGTGGAATATTGCCGCC
AGGGATGAAAGAGAAAAACACGGGAATCAAGGCTGCGGATGGGGAAAAAA
CAGGAATCAAAGCTGTCGATGGGGAAGACGATTCAGGAATCAAAGAGAAC
GTGACAGGCAAAGAGGCCGGGGAGGACGCGGTTCTAGGGGACATGGATGC
TTTACGCGGCATGTCAACGTGAGCATTCGCATACTCAACAGTTGCCCATT
TGCCGCATGTTTCGAAGGATGATGTGCGAACTTGTTGTAGAGCTTGCCCA
GGTTTACTCTATTACGCCCAAAACGCGTTTATCGAAAACTCCCGACCTGG
TCGCCAAGCTTAGAACAGACCAACCGTCGCGAGTAGATTGTGTTGTGTAG
ACCGAACTGCGCTCTTGGTGTAATGCACGTTCGTTGGCGAAATATTGTGT
GCGAGGCAGGAAAGATTGGGTCCTGTGTCGCTGGCCTCGCGCGTTCTCTA
TAAAAAACGCAGGCAGCCAGGAAAATTGGGTCCGAGAAGGCGGTGGTGAT
CTATTCCAATGTACTAGTCACTGTTACTGCTTCTTCTCTCCTACAAATAT
ATGTCGTGTGTGGCTGTGATTTATTGGTGGACACCGCTAATACAGGTTAG
AGCGTTTAAAATACATCAAGGACAAGGTGGCGCTTCTGTATAAGCGATAC
TTTTGGGTGGCCTTTGGTACCTACTGGGCGATCTACATAAGTGGATTTGG
GATCATATACGGCGCCCTCGTCACTGGTTTAGTTGACCCCGGGGTGAGTT
TTGAAAGTTTTGACATGTGCCGCACTATTCGAATTTAGCCTACATGGTAT
CCTTCAATGAGGCTCTACGGTGGAATGAATCATATTGCACCTCTATTTTT
ATCTTCTCTATACACTGCCCCTTTTACGAGTGGGTTGGTGTAAATGTATT
AAGCCGTGAAGGTTGACGCAAATGCGTATCCGTAGTGTAGTAGCAAGTGC
ACTAGGTCGTTAAACTTGCCCTGTGGACGGAAAAGTTACCAATCGTAATA
CACAAAGGTACTACCGGCTGTTCGGGTCGGTTGCGCTCTCGCGGGTATTA
GCCCGCCGAAGTGAGAGCTATTTCTGCTTGAGAAGAGTCCTTTTACGCAG
GTAGCCCACATGATTTGTATGAAGCAGCCCACATTATGATACTTATACTG
CCTTTCATGTATGGGCAGAATGGTTCTACACTTTTCGCTCGGCGCGTTTG
GCGCGGAAAAGGCTTGGCGGCTAGCTATTTCAGGCGTGAAGTCTCCAGCT
GGGCCAACATTAAAAATACTGTTAGCTTGAGAGTTTTGAGTTGATGGCTC
AACCCGAGTGACTCGTACCACTTTTCGTGACTCCCAGGTGGATACAGCTA
CCGCCATCGCGACACTTGCCGACTTTTTAGGCTTGGAGGGGAATGAAACG
GTGTCTGGGTACGTGCAGTGGGCGCAGGACCTGGCGTTGAGTAACCCGGA
GGCCGAAAAGGCAATAATGGCTTTCATCGGCAGTGAGATGCTAGAGCTGC
CACGAGAACTATCGGTGCTGTTGCTCACGGTCCCCATCGCCCGCGCCCTG
GGCAAAGCCCCTCCCAAGAAAAGGTAGACCCACTAGAGCAATTACATCAG
CGTCCTTGAGGAAAAAAATCGAAGACAAAAGGGTGACCAAGCCAAACTAG
AGGAGTGTCTATCGGTTTCAAGAATAAAATCGGTTTCAAGAGCAAAGTCG
ACAGAGGGACGGGGTCCGATGTCCTCCGGGTGGTGACCATCTTGTCTTTG
TGTCGAGACCGCGTGTCGGCGTGTTTTATACTATTTGTGTGGTGCAGCTG
TGGCTTGGGCTTAGTGCACCCCCTGGACAAATAAGAATATTTAAAGCATT
CGCGATGAAGAATTCAAGGCTTCGCCTGTGTTTCAGAATGTGCGAGCGTA
TGGATTGAAGCCTTGAACTTCTCAGGGCAGTCGTAGGTGGTCTGGGGCAC
ATACAACAAATGTGTCCATGCTAAATCTAACCTTCAGGTGACTTCTTTTT
CATTTTCGTCGCGAATACTGAATGCGAAAAGTGTTCGTGTCGTATTCTCC
AGGGAGTGGTTAAGTGAAGTTATGTGTTGCTTCCAAGTGCATGCCATTGG
CAGTTTGCAGCGGGAGAGCGTAATGATGCGAGGCTCATGAATGAGATTCG
GTTGTGAAGTACAACAAAGACTGTAAAGCCGCAAGTCATCGTGACTTTTT
TGTGCAAAGATGCGTGCGCAGCAAATGGTCGCTCCAACGGATCTGGGCGT
CTTGTGGTATCATCGCTGGCTGGTGTGTTTTTCGAGTCGTCGTGCCCCGT
CCATGCACCGGCGTAGTCTATACATTTCGTCCTACTCATTTGTCTGCTGC
GACATTTACTGTGTGAACGTTATTGTCCATTGTTTGAAAGTAGCTGTTGG
ATGAGCATCCATCTGCCAGCTTGTCCAGTGCCTAATGTTGAATTCGAGGT
GATAACGTCTAAAGAAGGGAGTGTTGAGTTCTTTTACATGTTGATATTTT
TTTATTCCTACTTGTGGTGTACCTTCTGCCGCAGGAAAATCGGTTATATA
TTCAAAGGAATAAAAGTAACAGCGTTCGGCCAACGTCTGATGAACAAGAT
TATCAGAATTGACAGTTAACCTTCAAGTATTGTCTGTCCAGATCCGACAA
AGGATAGAATAGCAAATAGTAGTAATAATAATAATAATAATAATAAAAAG
TATGAGGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1095:8385..13393+ >mRNA_H-paniculata_contig1095.620.1 ID=mRNA_H-paniculata_contig1095.620.1|Name=mRNA_H-paniculata_contig1095.620.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2268bp|location=Sequence derived from alignment at H-paniculata_contig1095:8385..13393+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTGGCACTACGTGATATAAGAGGCGTTACACGACTCCTTCGGCAAGG
TCTACGATGTTCTCGACTGTGCTGCTTTGAAAAGCAGCCGGAAAAATTGT
CATTGGCAAGTGCAATGAGAATGTCCAGCAGTATGTTTCGTAGCGACAGG
ATGTCAACCAGATGGTGGCACTACGTGATATAAGAGGCGTTACACGACTC
CTTCGGCAAGGTCTACGATGTTCTCGACTGTGCTGCTTTGAAAAGCAGCC
GGAAAAATTGTCATTGGCAAGTGCAATGAGAATGTCCAGCAGTATGTTTC
GTAGCGACAGGATGTCAACCAGATATTCGCCTGCGCTACTGGGAACTTGT
TGCCGACGACCGACACCCGCGGCAGTTTTGGTGTCGTTTCGGCACGTCAA
CAGCAGTGAGCGGTCACTGAGGACACCAGACGACGAATATCTCAGCGACC
CCATTATATTCGCCTGCGCTACTGGGAACTTGTTGCCGACGACCGACACC
CGCGGCAGTTTTGGTGTCGTTTCGGCACGTCAACAGCAGTGAGCGGTCAC
TGAGGACACCAGACGACGAATATCTCAGCGACCCCATTCTGGGGGAGCGG
ATGGTGGCGTGCGCAGCGCAAACTCTGTCGCCGATCGAAGCCAATATCAC
ACATCGAGGCGAGGAGAAGTCGCTTGGAACGTTTGTGCAATTGGCGGGGC
ATGTGCCAATGGCGAATGTGCCAAACGGACGACGCCGAGGGACGATGGTG
AACCTTCCGGCTAGTAAATGGAGTGGAATCGGCGAAAGGGCTCTCCACCG
TGATATATGCACACGACTGGGCGGTGTCGCTCTCTTCGCTCTGGGGGAGC
GGATGGTGGCGTGCGCAGCGCAAACTCTGTCGCCGATCGAAGCCAATATC
ACACATCGAGGCGAGGAGAAGTCGCTTGGAACGTTTGTGCAATTGGCGGG
GCATGTGCCAATGGCGAATGTGCCAAACGGACGACGCCGAGGGACGATGG
TGAACCTTCCGGCTAGTAAATGGAGTGGAATCGGCGAAAGGGCTCTCCAC
CGTGATATATGCACACGACTGGGCGGTGTCGCTCTCTTCGCTACGGGACC
GAGACGTGGTGGAATATTGCCGCCAGGGATGAAAGAGAAAAACACGGGAA
TCAAGGCTGCGGATGGGGAAAAAACAGGAATCAAAGCTGTCGATGGGGAA
GACGATTCAGGAATCAAAGAGAACGTGACAGGCAAAGAGGCCGGGGAGGA
CGCGGTTCTAGGGGACATGGATGCTTTACGCGGCATGTCAACACGGGACC
GAGACGTGGTGGAATATTGCCGCCAGGGATGAAAGAGAAAAACACGGGAA
TCAAGGCTGCGGATGGGGAAAAAACAGGAATCAAAGCTGTCGATGGGGAA
GACGATTCAGGAATCAAAGAGAACGTGACAGGCAAAGAGGCCGGGGAGGA
CGCGGTTCTAGGGGACATGGATGCTTTACGCGGCATGTCAACGTTAGAGC
GTTTAAAATACATCAAGGACAAGGTGGCGCTTCTGTATAAGCGATACTTT
TGGGTGGCCTTTGGTACCTACTGGGCGATCTACATAAGTGGATTTGGGAT
CATATACGGCGCCCTCGTCACTGGTTTAGTTGACCCCGGGGTTAGAGCGT
TTAAAATACATCAAGGACAAGGTGGCGCTTCTGTATAAGCGATACTTTTG
GGTGGCCTTTGGTACCTACTGGGCGATCTACATAAGTGGATTTGGGATCA
TATACGGCGCCCTCGTCACTGGTTTAGTTGACCCCGGGGTGGATACAGCT
ACCGCCATCGCGACACTTGCCGACTTTTTAGGCTTGGAGGGGAATGAAAC
GGTGTCTGGGTACGTGCAGTGGGCGCAGGACCTGGCGTTGAGTAACCCGG
AGGCCGAAAAGGCAATAATGGCTTTCATCGGCAGTGAGATGCTAGAGCTG
CCACGAGAACTATCGGTGCTGTTGCTCACGGTCCCCATCGCCCGCGCCCT
GGGCAAAGCCCCTCCCAAGAAAAGGTAGGTGGATACAGCTACCGCCATCG
CGACACTTGCCGACTTTTTAGGCTTGGAGGGGAATGAAACGGTGTCTGGG
TACGTGCAGTGGGCGCAGGACCTGGCGTTGAGTAACCCGGAGGCCGAAAA
GGCAATAATGGCTTTCATCGGCAGTGAGATGCTAGAGCTGCCACGAGAAC
TATCGGTGCTGTTGCTCACGGTCCCCATCGCCCGCGCCCTGGGCAAAGCC
CCTCCCAAGAAAAGGTAG back to top
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