mRNA_H-paniculata_contig10947.617.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig10947.617.1
Unique NamemRNA_H-paniculata_contig10947.617.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig10947.617.1 vs. uniprot
Match: D8LNX5_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNX5_ECTSI)

HSP 1 Score: 434 bits (1117), Expect = 1.850e-139
Identity = 232/303 (76.57%), Postives = 260/303 (85.81%), Query Frame = 1
Query:    4 MDPGQEDAHLLAAQVYLMQGKFRAASTSLEQALSCNFRVGKSPVFLLVRAIVLREEGNLEEALETLEEAIRLPGVR-DRVSGSTSATVGTNSETV--SFTGSENAAIFVGAIGILAKLKRTADANELVREATAIFRGTPDEVQIVIANSELAIETGDFDKAIAILQDVRPESPAYVRLQSVKATVYLTLRRDKRAYAQCYRDMAQANPCAATYVLLGEAYMRIQMPEAAIDSFEIALESDPSDSTLADQIGRALVSTHDYNRAVHYYHKALRGQPNSISLRHDLARLCLKLRRFDDATGVLRE 903
            MDP  EDAHLLAAQV+L QG+ RAAS SLEQALS +FRVGK+PVFLLV+A V +EEG LEEALET EEA+RLP VR   + GS  AT G    T   SFT  E AAIF GA+G+LAKLKRTA+A ELV+EA A+FRGTPDEVQIV+ANSELAIE GDF+KA+ IL DV PESPAYVR+QSVKAT+YLTLRRDKRAYAQCYRDMAQANP AATYVLLGEAYMRIQMPEAAI+SFEIAL++DPSDS+LA QIGRALVSTHDY RAV YY KALRGQP S+ LRHDLARLCLKL R++DA+GVL++
Sbjct:  508 MDPALEDAHLLAAQVHLAQGRCRAASNSLEQALSFSFRVGKNPVFLLVKASVQKEEGKLEEALETFEEALRLPSVRGSTLGGSAPATRGGTVGTALSSFTDGEKAAIFSGAVGVLAKLKRTAEATELVKEAMAMFRGTPDEVQIVVANSELAIERGDFEKALKILGDVPPESPAYVRVQSVKATIYLTLRRDKRAYAQCYRDMAQANPSAATYVLLGEAYMRIQMPEAAIESFEIALDTDPSDSSLAGQIGRALVSTHDYRRAVEYYRKALRGQPRSVPLRHDLARLCLKLGRYEDASGVLQQ 810          
BLAST of mRNA_H-paniculata_contig10947.617.1 vs. uniprot
Match: A0A7S2FRK9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FRK9_9STRA)

HSP 1 Score: 274 bits (701), Expect = 1.620e-82
Identity = 149/299 (49.83%), Postives = 200/299 (66.89%), Query Frame = 1
Query:    4 MDPGQEDAHLLAAQVYLMQGKFRAASTSLEQALSCNFRVGKSPVFLLVRAIVLREEGNLEEALETLEEAIRLPGVRDRVSGSTSATVGTNSETVSFTGSENAAIFVGAIGILAKLKRTADANELVREATAIFRGTPDEVQIVIANSELAIETGDFDKAIAILQDVRPESPAYVRLQSVKATVYLTLRRDKRAYAQCYRDMAQANPCAATYVLLGEAYMRIQMPEAAIDSFEIALESDPSDSTLADQIGRALVSTHDYNRAVHYYHKALRGQPNSISLRHDLARLCLKLRRFDDATGVLR 900
            +DP   D HLL AQ+ L Q   R A+ SLEQALS NF++  SP++ LVRA VL E+G+ + AL  LEEA+ LPG+R             +SE+VS    + A IFV    +L KL R ++A  +V EA ++F+GT  EV++++A+SELAI   DFD AI +L  V  +SPAY + Q VKA ++LT R DKRAY +CYRD+ + +P   + VLLGEAYMRIQ PEAA+++F  AL+ DP D+ LA +IGRALVSTHDY +A+ YY  AL+  P ++ LR DLA+L  KLR+F+ A   LR
Sbjct:   34 LDPSYSDGHLLLAQIALTQQNHRLANQSLEQALSYNFQIRSSPIYHLVRAQVLSEQGDSDLALAQLEEAMELPGIR------------VSSESVSVV--QRADIFVEMANVLGKLSRVSEAQAIVAEARSLFKGTTAEVKVIVADSELAIRRNDFDSAIKMLNKVPQDSPAYGQAQMVKANIFLTHRHDKRAYTKCYRDLVEMDPSPRSCVLLGEAYMRIQAPEAAVEAFHNALKLDPGDTALAAKIGRALVSTHDYRKAIDYYMAALKSMPENMELRFDLAKLLAKLRKFEQAIKCLR 318          
BLAST of mRNA_H-paniculata_contig10947.617.1 vs. uniprot
Match: F0YIN6_AURAN (Uncharacterized protein TPR3 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIN6_AURAN)

HSP 1 Score: 248 bits (633), Expect = 4.850e-71
Identity = 139/298 (46.64%), Postives = 189/298 (63.42%), Query Frame = 1
Query:    4 MDPGQEDAHLLAAQVYLMQGKFRAASTSLEQALSCNFRVGKSPVFLLVRAIVLREEGNLEEALETLEEAIRLPGVRDRVSGSTSATVGTNSETVSFTGSENAAIFVGAIGILAKLKRTADANELVREATAIFRGTPDEVQIVIANSELAIETGDFDKAIAILQDVRPESPAYVRLQSVKATVYLTLRRDKRAYAQCYRDMAQANPCAATYVLLGEAYMRIQMPEAAIDSFEIALESDPSDSTLADQIGRALVSTHDYNRAVHYYHKALRGQPNSISLRHDLARLCLKLRRFDDATGVL 897
            +D     AHLL A           AS SLEQA++C+F+V K+P + LV+A +   EGN +EAL+TL+EA+RLPGVRD +      +V           +E AA+FV    ILA L +  +A  ++ EA   FRGT +E++++++NS LAI+  DFD AI +L  V   SPAYV  Q  KA  YL++R DKRAY QC+RD+   +P A +Y  LG AYM IQ PEAAI+++E A   DP D++LA +IGRAL+STHDY +A  YY  AL+   + I LRHDLARL +KL+++  A  VL
Sbjct:  495 LDSQSAAAHLLMAXXXXXXXXXXGASNSLEQAIACDFQVRKAPSYALVKARLCAYEGNHDEALKTLQEALRLPGVRDGIPAGVPGSV---------PHAERAAVFVDLADILATLSQFHEAMSILAEAQERFRGTSEEIRVLMSNSLLAIKRNDFDGAIQMLNGVPQSSPAYVHAQQAKANFYLSVRHDKRAYTQCFRDLVGFDPSAQSYERLGAAYMHIQAPEAAIEAYEQAHNLDPRDASLAAKIGRALISTHDYLKATDYYVTALQAHADDIHLRHDLARLFVKLKKYGSAVQVL 783          
BLAST of mRNA_H-paniculata_contig10947.617.1 vs. uniprot
Match: A0A662XS05_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XS05_9STRA)

HSP 1 Score: 241 bits (614), Expect = 2.050e-68
Identity = 137/305 (44.92%), Postives = 197/305 (64.59%), Query Frame = 1
Query:    4 MDPGQEDAHLLAAQVYLMQGKFRAASTSLEQALSCNFRVGKSPVFLLVRAIVLREEGNLEEALETLEEAIRLPGVRDRVSGSTSA-----TVGTNSETVSFTGSENAAIFVGAIGILAKLKRTADANELVREATAIFRGTPDEVQIVIANSELAIETGDFDKAIAILQDVRPESPAYVRLQSVKATVYLTLRRDKRAYAQCYRDMAQANPCAATYVLLGEAYMRIQMPEAAIDSFEIALESDPSDSTLADQIGRALVSTHDYNRAVHYYHKALRGQPNSISLRHDLARLCLKLRRFDDATGVLRE 903
            MDPG   AHLL A+V L +  FRAAS  L+QALS +F V +S  + L++A VL   G++ EAL+TL+ A+ L       SGST       T   NS T+     + A++++    +L++L    +A++ VREA  +FRGT  EV++++ANSELAI+ GD+D AIA+L  V   SPA+ + Q VKA +YL  R+DK+ YA+CY+++   NPC AT+V + EA++RIQM + A++SFE A    P D T+  +IGR L+S HDY +AV YY  AL+  P+++ LR DLA L  KLR FD A  V+++
Sbjct:  665 MDPGHAKAHLLQARVSLEREHFRAASACLDQALSYDFSVRQSLPYYLIKARVLEAGGDVREALQTLQTAMTLIQGGSTSSGSTRRLKQPPTATDNSVTLF----DKASVYIQLAQVLSQLNDIPEASKTVREALDLFRGTSQEVRVLVANSELAIKRGDYDAAIAMLSGVPVGSPAFTKAQMVKADIYLQYRKDKQLYARCYQELVALNPCHATHVSMAEAFLRIQMLDQAVESFERAKALSPGDPTIVGRIGRVLISKHDYLKAVDYYESALKLAPSNLVLRKDLAELYAKLRHFDQALRVVQQ 965          
BLAST of mRNA_H-paniculata_contig10947.617.1 vs. uniprot
Match: A0A2P4X3W9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X3W9_9STRA)

HSP 1 Score: 239 bits (609), Expect = 2.220e-68
Identity = 130/303 (42.90%), Postives = 192/303 (63.37%), Query Frame = 1
Query:    4 MDPGQEDAHLLAAQVYLMQGKFRAASTSLEQALSCNFRVGKSPVFLLVRAIVLREEGNLEEALETLEEAIRL---PGVRDRVSGSTSATVGTNSETVSFTGSENAAIFVGAIGILAKLKRTADANELVREATAIFRGTPDEVQIVIANSELAIETGDFDKAIAILQDVRPESPAYVRLQSVKATVYLTLRRDKRAYAQCYRDMAQANPCAATYVLLGEAYMRIQMPEAAIDSFEIALESDPSDSTLADQIGRALVSTHDYNRAVHYYHKALRGQPNSISLRHDLARLCLKLRRFDDATGVLRE 903
            M+PG   AHL+ A+V L    FRAAS  L+QALS +F V +S  + +++A +L   G++ EAL TL+ A+++    G     S +       NS   + +  + A++++    +L++L   ++A + VREA  +FRGT  EV++++ANSELAI+ GD+D AIA+L  V   SPA+ + Q VKA +YL  R+DK  YA+CY+++   NPC AT+V L EAY+RIQM + A+ SFE A    P D T+A +IGR L+S HDY +AV YY  AL+  P ++ LR DLA L  KLR +D A  V+++
Sbjct:  183 MEPGHSKAHLMQARVNLENEHFRAASACLDQALSYDFSVRQSLSYYIIKARILENSGDVREALLTLQTAMKMIQSAGTSSTGSSNRRQKAAENSNAGNISLFDKASVYIHMAQVLSQLSDISEATKTVREALDVFRGTSQEVRVLVANSELAIKRGDYDAAIAMLSSVPVGSPAFTKAQMVKADIYLQYRKDKHLYARCYQELVALNPCHATHVSLAEAYLRIQMLDEAVQSFERAKALSPGDPTIAGRIGRVLISKHDYLKAVDYYETALKMAPGNLVLRKDLAELYAKLRHYDQALRVVQQ 485          
BLAST of mRNA_H-paniculata_contig10947.617.1 vs. uniprot
Match: A0A0P1AXR8_PLAHL (Tetratricopeptide TPR1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AXR8_PLAHL)

HSP 1 Score: 239 bits (611), Expect = 4.770e-68
Identity = 125/300 (41.67%), Postives = 192/300 (64.00%), Query Frame = 1
Query:    4 MDPGQEDAHLLAAQVYLMQGKFRAASTSLEQALSCNFRVGKSPVFLLVRAIVLREEGNLEEALETLEEAIRLPGVRDRVSGSTSATVGTNSETVSFTGSENAAIFVGAIGILAKLKRTADANELVREATAIFRGTPDEVQIVIANSELAIETGDFDKAIAILQDVRPESPAYVRLQSVKATVYLTLRRDKRAYAQCYRDMAQANPCAATYVLLGEAYMRIQMPEAAIDSFEIALESDPSDSTLADQIGRALVSTHDYNRAVHYYHKALRGQPNSISLRHDLARLCLKLRRFDDATGVLRE 903
            M+PG   AHL+ A+V L +G FRAAS SL++ALS +F V +S  + ++RA +L   GN+ +AL+TL+ A+++       S            T + +  + A++++    +L++L     A + VREA  +FRGT  EV++++ANSELA++ GD+D AI +L  V  +SPA+ + Q+VKA ++L  R+DK  Y +CY+++   NPC AT++ L EAY+ IQM + A+ SFE A    PSD T+A +IGR L+S HDY +AV YY  AL+  P ++ LR DLA L +KLR F+ A  V+++
Sbjct:  535 MEPGHSKAHLMHARVSLERGHFRAASASLDRALSYDFSVRQSLSYYIIRARILEHAGNVRDALQTLQTAMKMIQNNGSSSSLNRQPKHVAESTSTISPFDKASLYINMAQVLSQLNDLPGATKTVREALDVFRGTAQEVRVLVANSELAVKRGDYDAAIGMLSSVPKDSPAFTKAQTVKADIFLQYRKDKHLYVRCYQELVAQNPCQATHISLAEAYLHIQMLDEAVQSFERAKALSPSDPTIAGRIGRVLISKHDYLKAVDYYESALKMAPENLVLRKDLAELYIKLRHFEQALFVVQQ 834          
BLAST of mRNA_H-paniculata_contig10947.617.1 vs. uniprot
Match: H3HCY3_PHYRM (Uncharacterized protein n=20 Tax=Phytophthora TaxID=4783 RepID=H3HCY3_PHYRM)

HSP 1 Score: 239 bits (609), Expect = 9.770e-68
Identity = 130/300 (43.33%), Postives = 195/300 (65.00%), Query Frame = 1
Query:    4 MDPGQEDAHLLAAQVYLMQGKFRAASTSLEQALSCNFRVGKSPVFLLVRAIVLREEGNLEEALETLEEAIRLPGVRDRVSGSTSATVGTNSETVSFTGSENAAIFVGAIGILAKLKRTADANELVREATAIFRGTPDEVQIVIANSELAIETGDFDKAIAILQDVRPESPAYVRLQSVKATVYLTLRRDKRAYAQCYRDMAQANPCAATYVLLGEAYMRIQMPEAAIDSFEIALESDPSDSTLADQIGRALVSTHDYNRAVHYYHKALRGQPNSISLRHDLARLCLKLRRFDDATGVLRE 903
            M+PG   AHL+ A+V L +  FRAAS  L+QALS +F V +S  + +++A +L   G++ EAL+TL+ A++L      V G+ + +     + VS    + A++++    +L++L    +A + VREA  +FRGT  EV++++ANSELAI+ GD+D AIA+L  V   SPA+ + Q VKA +YL  R+DK  YA+CY+++   NPC AT+V + EAY+RIQM + A++SFE A    P D T+A +IGR L+S HDY +AV YY  AL+  P ++ LR DLA L  KLR +D A  V+++
Sbjct:  764 MEPGHSKAHLMQARVSLEREHFRAASACLDQALSYDFSVRQSLSYYIIKARILENAGDVREALQTLQTAMKL---MQGVGGAPTGSSARRQKHVSLF--DKASVYIHMAQVLSQLNDIPEATKTVREALDVFRGTSQEVRVLVANSELAIKRGDYDAAIAMLSGVPVGSPAFTKAQMVKADIYLQYRKDKHLYARCYQELVAINPCHATHVSMAEAYLRIQMLDQAVESFERAKALSPGDPTIAGRIGRVLISKHDYLKAVDYYETALKLAPGNLVLRKDLAELYAKLRHYDQALRVVQQ 1058          
BLAST of mRNA_H-paniculata_contig10947.617.1 vs. uniprot
Match: A0A485KXP9_9STRA (Aste57867_12996 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXP9_9STRA)

HSP 1 Score: 233 bits (594), Expect = 9.080e-66
Identity = 124/304 (40.79%), Postives = 191/304 (62.83%), Query Frame = 1
Query:    4 MDPGQEDAHLLAAQVYLMQGKFRAASTSLEQALSCNFRVGKSPVFLLVRAIVLREEGNLEEALETLEEAIRLPGV------RDRVSGSTSATVGTNSETVSFTGSENAAIFVGAIGILAKLKRTADANELVREATAIFRGTPDEVQIVIANSELAIETGDFDKAIAILQDVRPESPAYVRLQSVKATVYLTLRRDKRAYAQCYRDMAQANPCAATYVLLGEAYMRIQMPEAAIDSFEIALESDPSDSTLADQIGRALVSTHDYNRAVHYYHKALRGQPNSISLRHDLARLCLKLRRFDDATGVL 897
            M+P    AHLL A+V L +  F+AAS+SL+QALS +F V +SP F +++A ++  EGNL+EAL  L+ A++          + + S  TS T    +     T  + A++++    + ++L   A+A  LV+EA  +F+GTP EV++++ANSELAI+ GDFD AI +L +V  ESPAY++ Q +KA +YL  R++K+ YA+CY+++ + +P   + + L EAY+RIQ  + AI+++  AL   P+D++LA +IG  LV  HDY  A+ YY   LR  P+   LR DLA L  +L  FD A  V+
Sbjct:  527 MNPLHSQAHLLVARVCLEREHFKAASSSLDQALSHDFSVRQSPSFHIIKAKLMENEGNLKEALAILQTAMKATAGAAPTTDKGKSSKRTSVTAAPTNPATDMTLFDKASVYIQTAAVQSQLNNVAEATRLVKEALQVFKGTPQEVRVLVANSELAIKRGDFDNAIIMLNNVPQESPAYIKAQMIKADIYLQHRKEKKLYAECYKELVRLSPTPESLIRLAEAYLRIQQLDDAIEAYRSALVLSPNDASLASRIGHILVKKHDYISAIEYYETXLRSAPDQTPLRRDLANLLCRLSHFDQALRVV 830          
BLAST of mRNA_H-paniculata_contig10947.617.1 vs. uniprot
Match: A0A3R7J6A6_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J6A6_9STRA)

HSP 1 Score: 229 bits (585), Expect = 1.510e-64
Identity = 131/313 (41.85%), Postives = 191/313 (61.02%), Query Frame = 1
Query:    4 MDPGQEDAHLLAAQVYLMQGKFRAASTSLEQALSCNFRVGKSPVFLLVRAIVLREEGNLEEALETLEEAIRLPGVRDRVSG-------------STSATVGTNSETVSFTGSENAAIFVGAIGILAKLKRTADANELVREATAIFRGTPDEVQIVIANSELAIETGDFDKAIAILQDVRPESPAYVRLQSVKATVYLTLRRDKRAYAQCYRDMAQANPCAATYVLLGEAYMRIQMPEAAIDSFEIALESDPSDSTLADQIGRALVSTHDYNRAVHYYHKALRGQPNSISLRHDLARLCLKLRRFDDATGVLRE 903
            MDPG   AHL+ A+V L +  FRAAS+ L+QALS +F V +S  + +++A +L   G+++EAL+TL                            ST  T GT S        + A++++    +L++L    +A + VR+A  +FRGT  EV++++ANSELAI+ GD+D AIA+L  V   SPA+ + Q VKA ++L  R+DK+ YA+CY+++   NPC AT+V L EAY+RIQM + A++SFE A    P D T+A +IGR L+S HDY +AV YY  AL+  P ++ LR DLA L  KLR FD A  V+++
Sbjct:  542 MDPGHSKAHLMQARVSLEREHFRAASSCLDQALSYDFSVRQSLSYYIIKARILENAGDVKEALQTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTENTAGTISLF------DKASVYIQMAQVLSQLSDIPEATKTVRDALDVFRGTSQEVRVLVANSELAIKRGDYDAAIAMLSSVPVGSPAFTKAQMVKADIFLQYRKDKQLYARCYQELVALNPCHATHVSLAEAYLRIQMLDQAVESFERAKALSPGDPTIAGRIGRVLISKHDYLKAVDYYETALKMAPGNLVLRKDLAELYAKLRHFDQALRVVQQ 848          
BLAST of mRNA_H-paniculata_contig10947.617.1 vs. uniprot
Match: A0A226NZA0_COLVI (Uncharacterized protein n=2 Tax=Neognathae TaxID=8825 RepID=A0A226NZA0_COLVI)

HSP 1 Score: 223 bits (568), Expect = 4.260e-63
Identity = 123/300 (41.00%), Postives = 191/300 (63.67%), Query Frame = 1
Query:    7 DPGQEDAHLLAAQVYLMQGKFRAASTSLEQALSCNFRVGKSPVFLLVRAIVLREEGNLEEALETLEEAIRLPGVRDRVSGSTSATVGTNSETVSFTGSENAAIFVGAIGILAKLKRTADANELVREATAIFRGTPDEVQIVIANSELAIETGDFDKAIAILQDVRPESPAYVRLQSVKATVYLTLRRDKRAYAQCYRDMAQANPCAATYVLLGEAYMRIQMPEAAIDSFEIALESDPSDSTLADQIGRALVSTHDYNRAVHYYHKALR-GQPNSISLRHDLARLCLKLRRFDDATGVLRE 903
            +P   DAHLL AQVYL Q   +  S SLE  LS +F V + PV+ L++A   ++ G L EA++TL+ A  LPG+R        A+  T  + +    S+  A+F+  +          +A  ++++A   F GTP+E+++VIANS+LAI  GD ++A+ +L+++ PE P +V+ +   A +YL  RRDK+ YA CYRD+ +  P A T++LLG+AYM IQ P+ AI+ +E AL+ +P D  LA +IG+AL+ TH+Y++A+ YY  AL+ GQ N   LR+DLA L +KL++++ A  VL++
Sbjct:  504 NPAYADAHLLMAQVYLAQNNTKLCSQSLELCLSYDFEVREHPVYHLIKAQTQKKMGELSEAIKTLQMARNLPGMRKHT-----ASTKTKGKRIEIDTSDRVAVFLELVEAHCLNGEQHEAAVVLQDAIDEFSGTPEELRVVIANSDLAIAQGDVEQALTMLRNITPEQPYFVQAKLKMADIYLQCRRDKKLYAACYRDLVEKLPSAHTFLLLGDAYMNIQEPDEAIEVYEQALKKNPKDPALASKIGKALIKTHNYSKAISYYEAALKSGQQNF--LRYDLAELLMKLKQYEKAELVLQQ 796          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10947.617.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNX5_ECTSI1.850e-13976.57Flagellar associated protein n=1 Tax=Ectocarpus si... [more]
A0A7S2FRK9_9STRA1.620e-8249.83Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
F0YIN6_AURAN4.850e-7146.64Uncharacterized protein TPR3 n=1 Tax=Aureococcus a... [more]
A0A662XS05_9STRA2.050e-6844.92Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A2P4X3W9_9STRA2.220e-6842.90Uncharacterized protein n=2 Tax=Phytophthora palmi... [more]
A0A0P1AXR8_PLAHL4.770e-6841.67Tetratricopeptide TPR1 n=1 Tax=Plasmopara halstedi... [more]
H3HCY3_PHYRM9.770e-6843.33Uncharacterized protein n=20 Tax=Phytophthora TaxI... [more]
A0A485KXP9_9STRA9.080e-6640.79Aste57867_12996 protein n=1 Tax=Aphanomyces stella... [more]
A0A3R7J6A6_9STRA1.510e-6441.85Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A226NZA0_COLVI4.260e-6341.00Uncharacterized protein n=2 Tax=Neognathae TaxID=8... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10947contigH-paniculata_contig10947:4832..7941 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score438.7
Seed ortholog evalue2.1e-120
Seed eggNOG ortholog2880.D8LNX5
Preferred nameTTC21B
KEGG koko:K19673
Hectar predicted targeting categoryother localisation
GOsGO:0003002,GO:0005575,GO:0005623,GO:0005929,GO:0006355,GO:0006357,GO:0006810,GO:0006928,GO:0006996,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007166,GO:0007224,GO:0007275,GO:0007389,GO:0007399,GO:0007417,GO:0007420,GO:0008104,GO:0008150,GO:0008589,GO:0009889,GO:0009953,GO:0009966,GO:0009987,GO:0010468,GO:0010556,GO:0010646,GO:0010970,GO:0016043,GO:0019219,GO:0019222,GO:0021591,GO:0021798,GO:0021871,GO:0022607,GO:0023051,GO:0023052,GO:0030030,GO:0030031,GO:0030705,GO:0030900,GO:0030990,GO:0030991,GO:0031323,GO:0031326,GO:0031503,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0035721,GO:0035735,GO:0042073,GO:0042995,GO:0043226,GO:0044085,GO:0044422,GO:0044441,GO:0044463,GO:0044464,GO:0044782,GO:0046907,GO:0048513,GO:0048583,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051179,GO:0051234,GO:0051252,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0060271,GO:0060322,GO:0061512,GO:0065007,GO:0070727,GO:0070925,GO:0071840,GO:0080090,GO:0097542,GO:0099111,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.intraciliary retrograde transport
EggNOG OGs28HZH@1,2QQAB@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons8
Model size903
Cds size900
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928801.311763-UTR-H-paniculata_contig10947:4831..48341622928801.311763-UTR-H-paniculata_contig10947:4831..4834Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10947 4832..4834 +
1691480625.3044398-UTR-H-paniculata_contig10947:4831..48341691480625.3044398-UTR-H-paniculata_contig10947:4831..4834Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10947 4832..4834 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928801.3300605-CDS-H-paniculata_contig10947:4834..48761622928801.3300605-CDS-H-paniculata_contig10947:4834..4876Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10947 4835..4876 +
1691480625.3208117-CDS-H-paniculata_contig10947:4834..48761691480625.3208117-CDS-H-paniculata_contig10947:4834..4876Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10947 4835..4876 +
1622928801.3552608-CDS-H-paniculata_contig10947:5024..51941622928801.3552608-CDS-H-paniculata_contig10947:5024..5194Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10947 5025..5194 +
1691480625.3288763-CDS-H-paniculata_contig10947:5024..51941691480625.3288763-CDS-H-paniculata_contig10947:5024..5194Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10947 5025..5194 +
1622928801.3712904-CDS-H-paniculata_contig10947:5446..55761622928801.3712904-CDS-H-paniculata_contig10947:5446..5576Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10947 5447..5576 +
1691480625.3386688-CDS-H-paniculata_contig10947:5446..55761691480625.3386688-CDS-H-paniculata_contig10947:5446..5576Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10947 5447..5576 +
1622928801.3898485-CDS-H-paniculata_contig10947:5889..59511622928801.3898485-CDS-H-paniculata_contig10947:5889..5951Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10947 5890..5951 +
1691480625.3481097-CDS-H-paniculata_contig10947:5889..59511691480625.3481097-CDS-H-paniculata_contig10947:5889..5951Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10947 5890..5951 +
1622928801.4144254-CDS-H-paniculata_contig10947:6257..63811622928801.4144254-CDS-H-paniculata_contig10947:6257..6381Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10947 6258..6381 +
1691480625.358516-CDS-H-paniculata_contig10947:6257..63811691480625.358516-CDS-H-paniculata_contig10947:6257..6381Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10947 6258..6381 +
1622928801.4326181-CDS-H-paniculata_contig10947:6575..67191622928801.4326181-CDS-H-paniculata_contig10947:6575..6719Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10947 6576..6719 +
1691480625.3724055-CDS-H-paniculata_contig10947:6575..67191691480625.3724055-CDS-H-paniculata_contig10947:6575..6719Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10947 6576..6719 +
1622928801.4512303-CDS-H-paniculata_contig10947:7224..72901622928801.4512303-CDS-H-paniculata_contig10947:7224..7290Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10947 7225..7290 +
1691480625.383803-CDS-H-paniculata_contig10947:7224..72901691480625.383803-CDS-H-paniculata_contig10947:7224..7290Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10947 7225..7290 +
1622928801.469702-CDS-H-paniculata_contig10947:7779..79411622928801.469702-CDS-H-paniculata_contig10947:7779..7941Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10947 7780..7941 +
1691480625.392412-CDS-H-paniculata_contig10947:7779..79411691480625.392412-CDS-H-paniculata_contig10947:7779..7941Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10947 7780..7941 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10947.617.1prot_H-paniculata_contig10947.617.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig10947 4835..7941 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig10947.617.1

>prot_H-paniculata_contig10947.617.1 ID=prot_H-paniculata_contig10947.617.1|Name=mRNA_H-paniculata_contig10947.617.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=300bp
MDPGQEDAHLLAAQVYLMQGKFRAASTSLEQALSCNFRVGKSPVFLLVRA
IVLREEGNLEEALETLEEAIRLPGVRDRVSGSTSATVGTNSETVSFTGSE
NAAIFVGAIGILAKLKRTADANELVREATAIFRGTPDEVQIVIANSELAI
ETGDFDKAIAILQDVRPESPAYVRLQSVKATVYLTLRRDKRAYAQCYRDM
AQANPCAATYVLLGEAYMRIQMPEAAIDSFEIALESDPSDSTLADQIGRA
LVSTHDYNRAVHYYHKALRGQPNSISLRHDLARLCLKLRRFDDATGVLRE
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mRNA from alignment at H-paniculata_contig10947:4832..7941+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10947.617.1 ID=mRNA_H-paniculata_contig10947.617.1|Name=mRNA_H-paniculata_contig10947.617.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3110bp|location=Sequence derived from alignment at H-paniculata_contig10947:4832..7941+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTGATGGACCCTGGTCAGGAGGATGCTCACTTGTTGGCGGCACAGGTGAA GCACGGAACAAAATATAATCGTGTGTTTGTACATCTTGACGCGCAATCTG TAGGAAGCACAATGTTTCAAGAGCGTCAAGAAGACGCTACTACAGAAGAC ACCATGAGTACCATCCCTTCCCCGCCCCGCGTGCCCCCTCAAGGTGTATC TAATGCAAGGGAAATTCCGTGCGGCTTCCACCAGCCTAGAACAGGCTCTG AGCTGCAATTTCCGGGTCGGTAAGAGCCCTGTGTTTCTGTTGGTGAGGGC GATAGTTTTGAGGGAAGAGGGAAACCTGGAAGAAGCCTTGGAGACCCTTG AGGAAGCGATAAGGTGAGGATTTATCACTACTCGCGCGATGCGATAACTT GTATTACGCGAAAACGGGAAAAGTCTACGCTTAACGAGGTGTGATGTACT ATTGACAAGTACATATAAATGCCCAACGTTTGCGGGAGGGAATTCAATAT GAGAGTTCGGGATTATACGCCTCCCAAGTACATAGCCACTCACTCCGAGG TTCATAACCTGTGTCGGTTGTCGAATCTCGCGACCGCTTCATCACGGGTT ACGCATCGACGACAGATTGCCGGGGGTCCGAGACCGTGTGTCCGGGTCGA CCTCAGCCACGGTGGGGACGAACTCTGAGACCGTCTCTTTCACGGGAAGC GAGAACGCGGCCATATTTGTTGGCGCTATCGGCATTCTGGCCAAGGTAAG TGTTATTCACTAAATCAGTACACAGTGTGGTTGTTGTATATAACCTGACA AATCGCACGTTTTTAGGGGCAAGTAGTGTCCGGTGCGGGTTCGGTCGCAT GGTCTTACATACTTTGTGCGATGAGGCTTAGGAGAGCAGCGACAGCTATA ATAAGACTTTCTAGTGGTCCCAACGCATTCACACCAGGTTATTAACGCCA CAGCATTCAATACTTTTCTTTCCCCTCCTGAATCTATCGTCGGTCCTGCG CTTGACGTGATTTCACCATTCTACCCACCCCTCTACGGCGCTGACATGGC GTGCACAGTTGAAGAGGACAGCCGACGCAAACGAGCTAGTGCGGGAAGCA ACGGCTATCTTTCGTGGAACGTGAGGATTTTGATCTATGCGCTCGTGCTC TATGGGCATGTCCACGGACGGACGCTGAAGTTGCTGCTACCTGCTGTTCT GTTTCAATAGATTTCCTGTTCCTGCGCACTCCCTGTGCGTCATTCTGCTA CCATCCTTTTGTTGCACCGTGATGGCCCCTTCGTGTCCCCGTGTTTGCTA CTTTCTTCTCTAGTATTCCATGCAAAATGTTTGGACGTCGGTGATGATCG TTCAGAGTTTTTCACCTTTGAACCAATTTGCTCACGGTATTTACCTATAT CTCCGTTGATCTCCCATGTACAATAGACCAGATGAGGTACAGATCGTGAT CGCCAACAGCGAGCTAGCAATCGAGACGGGAGATTTCGACAAGGCTATCG CAATTCTCCAAGATGTACGGCCGGAATCCCCAGCGTACGTCAGGCTACAG GTATATTTTTCTCCTGGAGCTTGGCGTTGCAGACAGTCAAACATTATAGA GCTATGCCTTGTCAAATATTTTGAAACTAGCGTTACCGTAAGCCACCGAT ACCAGTTCTTTTTTGGAGGCATGGCCGCCTGATCTCTTTCCCCGTACTCG ACATGGTACCAAAGCATTGTGTTGACACTTCCGCTCTTTCCCAGTCGGTG AAAGCAACGGTGTACTTGACTCTGCGAAGGGACAAGCGGGCGTACGCCCA ATGTTACCGTGACATGGCCCAAGCCAACCCCTGTGCTGCTACCTACGTCC TTTTGGGAGAGGCATATATGCGTATACAGATGCCCGAGGTGAGGTCATCA TTCCAGCTAATGGCGCACACAGGTCATAATCATCTCTACTCTTTCGTACA GATGCTGTTTTCGAAAAATATATATTCTGCTGCTACGGTGAAAGTGAGGG TAACTGTCCTCGACAGACATTGGTTGGTTATTACCCCTTTTGAGGTATTT TCTTCAGGTGGCCACCACACTACTGATTGATTGTACGGTGCTTAGTTTGC CCCACTTTGGATATCTTGTTGACAGAACCAGGATCCAGGGTGTTTACCCA TGTACCGCAGTACTAACATACTCTGCCATTTCGTGACTGTCGAATTTATC GACCAATAATCGCTGATCGTTTTGCGTGTCTTTGTCATATCAACCGAGTA CGCCTTCTTGACGATGATGTTGACTCGCCAGAGTATCACTCCGTGAGTTT GCACAATACGTCCGTGTCATACTCAACCTGTGAATCATTCATGATGGCCC CGCGCGGGTCCCCTGATACTGATTCTTGCTGCGACGTCTGTAGGCGGCCA TCGACTCCTTCGAGATAGCTCTGGAGAGTGATCCATCGGATTCAACACTG GCAGACCAGGTAAGAACTTCTGTTTTAGAAACTGAGTGATAATTTTTCAA GGCTGGCTCATTGTTTGACCACTACCTGTATGTTTTAGGCCCGACAAAAT CCATTCTAGCACTATCATATCGACATGAGAATCGGATAGCGTAATCTATA TGTTGTAGCGGACAATCGAAACATTTTCACAATGCACTCCTTCTGTACCT CGTATGCAAAGAACTTCACATATGCACACCATGTGGATTATCACCAGTTC CAGCGAATAGGGCCTTTGCTGAACAGACACGAAGTTCTTGCACAACATAT TTGCTGTTCTGAGATACCCCAACAGAGAGATGTTGTGCATCTGGTCCGAT CCCAACCCAGTAGATCGATCAATACTCCACCTTCTTGAAAACTCTTCTGT CTGTGGGCGCCACCACACAACTACGCAGTAAGTGCACCTAATTGTTTTGC TCTGTCCACGCCTTTTGGTTGTTTCCTTTCTTGTGATGGGCCAAAAAGAT TGGCAGGGCATTGGTCAGCACACACGACTACAACAGAGCGGTGCACTATT ACCACAAAGCTCTCAGGGGACAGCCCAACAGCATCTCTTTGCGTCATGAC CTTGCAAGGCTATGTCTTAAGCTACGCCGGTTCGATGATGCTACGGGAGT CTTGAGAGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig10947:4832..7941+

>mRNA_H-paniculata_contig10947.617.1 ID=mRNA_H-paniculata_contig10947.617.1|Name=mRNA_H-paniculata_contig10947.617.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1800bp|location=Sequence derived from alignment at H-paniculata_contig10947:4832..7941+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACCCTGGTCAGGAGGATGCTCACTTGTTGGCGGCACAGATGGACCC
TGGTCAGGAGGATGCTCACTTGTTGGCGGCACAGGTGTATCTAATGCAAG
GGAAATTCCGTGCGGCTTCCACCAGCCTAGAACAGGCTCTGAGCTGCAAT
TTCCGGGTCGGTAAGAGCCCTGTGTTTCTGTTGGTGAGGGCGATAGTTTT
GAGGGAAGAGGGAAACCTGGAAGAAGCCTTGGAGACCCTTGAGGAAGCGA
TAAGGTGTATCTAATGCAAGGGAAATTCCGTGCGGCTTCCACCAGCCTAG
AACAGGCTCTGAGCTGCAATTTCCGGGTCGGTAAGAGCCCTGTGTTTCTG
TTGGTGAGGGCGATAGTTTTGAGGGAAGAGGGAAACCTGGAAGAAGCCTT
GGAGACCCTTGAGGAAGCGATAAGATTGCCGGGGGTCCGAGACCGTGTGT
CCGGGTCGACCTCAGCCACGGTGGGGACGAACTCTGAGACCGTCTCTTTC
ACGGGAAGCGAGAACGCGGCCATATTTGTTGGCGCTATCGGCATTCTGGC
CAAGATTGCCGGGGGTCCGAGACCGTGTGTCCGGGTCGACCTCAGCCACG
GTGGGGACGAACTCTGAGACCGTCTCTTTCACGGGAAGCGAGAACGCGGC
CATATTTGTTGGCGCTATCGGCATTCTGGCCAAGTTGAAGAGGACAGCCG
ACGCAAACGAGCTAGTGCGGGAAGCAACGGCTATCTTTCGTGGAACTTGA
AGAGGACAGCCGACGCAAACGAGCTAGTGCGGGAAGCAACGGCTATCTTT
CGTGGAACACCAGATGAGGTACAGATCGTGATCGCCAACAGCGAGCTAGC
AATCGAGACGGGAGATTTCGACAAGGCTATCGCAATTCTCCAAGATGTAC
GGCCGGAATCCCCAGCGTACGTCAGGCTACAGACCAGATGAGGTACAGAT
CGTGATCGCCAACAGCGAGCTAGCAATCGAGACGGGAGATTTCGACAAGG
CTATCGCAATTCTCCAAGATGTACGGCCGGAATCCCCAGCGTACGTCAGG
CTACAGTCGGTGAAAGCAACGGTGTACTTGACTCTGCGAAGGGACAAGCG
GGCGTACGCCCAATGTTACCGTGACATGGCCCAAGCCAACCCCTGTGCTG
CTACCTACGTCCTTTTGGGAGAGGCATATATGCGTATACAGATGCCCGAG
TCGGTGAAAGCAACGGTGTACTTGACTCTGCGAAGGGACAAGCGGGCGTA
CGCCCAATGTTACCGTGACATGGCCCAAGCCAACCCCTGTGCTGCTACCT
ACGTCCTTTTGGGAGAGGCATATATGCGTATACAGATGCCCGAGGCGGCC
ATCGACTCCTTCGAGATAGCTCTGGAGAGTGATCCATCGGATTCAACACT
GGCAGACCAGGCGGCCATCGACTCCTTCGAGATAGCTCTGGAGAGTGATC
CATCGGATTCAACACTGGCAGACCAGATTGGCAGGGCATTGGTCAGCACA
CACGACTACAACAGAGCGGTGCACTATTACCACAAAGCTCTCAGGGGACA
GCCCAACAGCATCTCTTTGCGTCATGACCTTGCAAGGCTATGTCTTAAGC
TACGCCGGTTCGATGATGCTACGGGAGTCTTGAGAGAGATTGGCAGGGCA
TTGGTCAGCACACACGACTACAACAGAGCGGTGCACTATTACCACAAAGC
TCTCAGGGGACAGCCCAACAGCATCTCTTTGCGTCATGACCTTGCAAGGC
TATGTCTTAAGCTACGCCGGTTCGATGATGCTACGGGAGTCTTGAGAGAG
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