mRNA_H-paniculata_contig10946.615.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10946.615.1 vs. uniprot
Match: D8LMN5_ECTSI (Digalactosyldiacylglycerol synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMN5_ECTSI) HSP 1 Score: 213 bits (543), Expect = 3.490e-59 Identity = 102/141 (72.34%), Postives = 120/141 (85.11%), Query Frame = 3 Query: 3 IFVNPSRSEVLCTTIAEALAMGKWVICARHPSNDFFSENFASCLAFSDEGEFMQCMKRALEEDVPKLPAENRNMLSWAAATERFLAAASRPEVPGRGTASKSARGLARLDKLMANFHSRAMKGRRGDLIRTALGGGPVARQ 425 +FVNPS+SEVLCTTIAEALAMGKWV+CARHPSN+FF NF +CL+FSDE EF+ CM++AL E P+L E R+ LSWAAAT+RF+AAASRPEVPGR SKSARGLARLDKL+A H MKG+RGDL+R A+GGGPVA+Q Sbjct: 412 VFVNPSQSEVLCTTIAEALAMGKWVVCARHPSNEFFFSNFETCLSFSDEREFLSCMQKALSETPPRLSEETRHKLSWAAATDRFMAAASRPEVPGRNNTSKSARGLARLDKLLAALHQHTMKGKRGDLLRQAMGGGPVAKQ 552
BLAST of mRNA_H-paniculata_contig10946.615.1 vs. uniprot
Match: A0A835YK94_9STRA (Digalactosyldiacylglycerol synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK94_9STRA) HSP 1 Score: 123 bits (308), Expect = 2.240e-26 Identity = 72/145 (49.66%), Postives = 87/145 (60.00%), Query Frame = 3 Query: 3 IFVNPSRSEVLCTTIAEALAMGKWVICARHPSNDFFSENFASCLAFSDEGEFMQCMKRALEEDVPKLPAENRNMLSWAAATERFLAAASRPEVPGRGTASKSARGLARLDKLMANFHSRAMKGRRGDLIRTALGGGPVARQAKYV 437 +FVNPS SEVLCTTIAEALAMGKWV+CARH SN+FF + F +CL F E EF + RAL +D L E R LSW AATER + AA + T +S LD++ FH +GRRGD +R L G V+ Q Y Sbjct: 464 LFVNPSVSEVLCTTIAEALAMGKWVVCARHSSNEFFYQ-FPNCLPFDGEKEFSANVYRALTKDPAPLTPEQRRTLSWTAATERLIDAA-------KVTVGESKARRRELDEVAWVFHQNLGEGRRGDTVRKILQAGVVSEQNAYT 600
BLAST of mRNA_H-paniculata_contig10946.615.1 vs. uniprot
Match: A0A7S0GDI2_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GDI2_9STRA) HSP 1 Score: 115 bits (289), Expect = 8.650e-26 Identity = 66/144 (45.83%), Postives = 91/144 (63.19%), Query Frame = 3 Query: 3 IFVNPSRSEVLCTTIAEALAMGKWVICARHPSNDFFSENFASCLAFSDEGEFMQCMKRALEEDVPKLPAENRNMLSWAAATERFLAAASRPEVPGRGTASKSARGLARLDKLMANFHSRAMKGRRGDLIRTALGGGPVARQAKY 434 +F+NPS SEVLCTT AEALAMGK+ I H SNDFF + F +CL + D+ +F ++ AL D L SW AATERF+ A ++ R +++ G +RLD+ +A FH+ KG +GD++R LGGGPV+ QA+Y Sbjct: 83 LFINPSESEVLCTTTAEALAMGKFAIIPVHASNDFFLK-FPNCLPYRDKLDFAANIRWALTHDPEPLSPALAREFSWEAATERFVKAC---QITKREARYRASLGKSRLDERIAYFHNELGKGVKGDVMRKVLGGGPVSDQARY 222
BLAST of mRNA_H-paniculata_contig10946.615.1 vs. uniprot
Match: A0A7S1ULG3_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1ULG3_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.360e-25 Identity = 69/144 (47.92%), Postives = 89/144 (61.81%), Query Frame = 3 Query: 3 IFVNPSRSEVLCTTIAEALAMGKWVICARHPSNDFFSENFASCLAFSDEGEFMQCMKRALEEDVPKLPAENRNMLSWAAATERFLAAASRPEVPGRGTASKSARGLARLDKLMANFHSRAMKGRRGDLIRTALGGGPVARQAKY 434 +FVNPS SEVLCTT AEALAMGK+VI HPSN FF + F +CLA+ D+ EF+ ++ AL + L E ++ +W AATER + AA+ V R + G +LD+ +A F + KGR GD IR LG GP A Q KY Sbjct: 177 VFVNPSVSEVLCTTTAEALAMGKFVIIPHHPSNMFFLQ-FPNCLAYRDKFEFVANLRWALTHEPEPLSPELAHVFTWEAATERLMKAAA---VTYREAWEREQSGWGKLDERIAWFQNEISKGRSGDTIRAVLGAGPAASQVKY 316
BLAST of mRNA_H-paniculata_contig10946.615.1 vs. uniprot
Match: A0A1Z5JY52_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JY52_FISSO) HSP 1 Score: 120 bits (301), Expect = 2.120e-25 Identity = 68/146 (46.58%), Postives = 93/146 (63.70%), Query Frame = 3 Query: 3 IFVNPSRSEVLCTTIAEALAMGKWVICARHPSNDFFSENFASCLAFSDEGEFMQCMKRALEEDVPKLPAENRNMLSWAAATERFLAAASRPEVPGRGTASKSARGLARLDKLMANFHSRAMKGRRGDLIRTALGGGPVARQAKYVR 440 +FVNPS SEVLCTT AEALAMGK+VI HPSN FF + F +CLA+ D+ EF+ ++ AL + L E +W AATERF+ AA+ E R + G +++D+ +A FH+ KG GD++R G GPV+ QAKY++ Sbjct: 542 VFVNPSVSEVLCTTTAEALAMGKFVIIPVHPSNQFFLK-FPNCLAYRDKFEFVANLRWALNHEPEPLTPELAQQFTWEAATERFMDAAAITEGEAR---ERERSGRSKMDERIAWFHNELGKGATGDMLRKICGAGPVSHQAKYLQ 683
BLAST of mRNA_H-paniculata_contig10946.615.1 vs. uniprot
Match: A0A7S2R2Q3_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R2Q3_9STRA) HSP 1 Score: 112 bits (281), Expect = 2.690e-25 Identity = 68/151 (45.03%), Postives = 88/151 (58.28%), Query Frame = 3 Query: 3 IFVNPSRSEVLCTTIAEALAMGKWVICARHPSNDFFSENFASCLAFSDEGEFMQCMKRALEEDVPKLPAENRNMLSWAAATERFL--AAASRPEVPGRGTASKSARGLARLDKLMANFHSRAMKGRRGDLIRTALGGGPVARQAKYVRTLK 449 IF+NPS SEVLCTT AEALAMGK+ I H SNDFF + F +CLA+ + EF + AL D L + +W AATER + AA +R E R K+ +LD+ +A FH+ KG +GD +R LGGGP++ Q KY K Sbjct: 9 IFINPSLSEVLCTTTAEALAMGKFAIIPVHSSNDFFMQ-FPNCLAYRNNLEFAANLGWALTHDPEPLTENQQRTFTWEAATERLVQEAAITRREARDRQLLGKN-----KLDERIAWFHNELSKGTKGDTLRKVLGGGPISDQVKYEMAKK 153
BLAST of mRNA_H-paniculata_contig10946.615.1 vs. uniprot
Match: A0A1Z5KRK1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KRK1_FISSO) HSP 1 Score: 118 bits (296), Expect = 9.130e-25 Identity = 70/144 (48.61%), Postives = 91/144 (63.19%), Query Frame = 3 Query: 3 IFVNPSRSEVLCTTIAEALAMGKWVICARHPSNDFFSENFASCLAFSDEGEFMQCMKRALEEDVPKLPAENRNMLSWAAATERFLAAASRPEVPGRGTASKSARGLARLDKLMANFHSRAMKGRRGDLIRTALGGGPVARQAKY 434 IFVNPS SEVLCTT AEALAMGK+V+ HPSNDFF ++F + L +S+ EF+Q + +A D L ++LSW AATER +A+ E AS+ R + D+ +A H + KGR GD+IR LGGGPVA Q +Y Sbjct: 572 IFVNPSISEVLCTTTAEALAMGKFVVLPEHPSNDFF-KSFPNALFYSNASEFVQQVSKARSTDPEPLSQNLSHLLSWEAATERLFESAAVSE----REASRRERLYEKEDRKLAMIHYKLGKGRSGDVIRKFLGGGPVANQVQY 710
BLAST of mRNA_H-paniculata_contig10946.615.1 vs. uniprot
Match: A0A7S2A4L2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A4L2_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.180e-24 Identity = 65/151 (43.05%), Postives = 94/151 (62.25%), Query Frame = 3 Query: 3 IFVNPSRSEVLCTTIAEALAMGKWVICARHPSNDFFSENFASCLAFSDEGEFMQCMKRALEEDVPKLPAENRNMLSWAAATERFLAAASRPEVPGRGTASKSARGLARLDKLMANFHSRAMKGRRGDLIRTALGGGPVARQAKYVRTLKQG 455 IFVNPS +EVLCTT AEALAMGK+ I HPSN FF + F +CL + ++ EF+ ++ A + L E + +W AATERF+ AA+ + ++ G +LD+ +A FH+ KG +GD +R LGGGP++ Q KYV++ +G Sbjct: 247 IFVNPSVTEVLCTTTAEALAMGKFAIIPDHPSNRFFMK-FPNCLVYQNKWEFVANLRWAQSHEPEPLTPELLHEFTWEAATERFINAAA---ITNEEAKERARLGKTKLDERIAWFHNELGKGVKGDRLRKVLGGGPISDQVKYVKSKIEG 393
BLAST of mRNA_H-paniculata_contig10946.615.1 vs. uniprot
Match: A0A1Z5JY29_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JY29_FISSO) HSP 1 Score: 117 bits (292), Expect = 2.860e-24 Identity = 66/144 (45.83%), Postives = 91/144 (63.19%), Query Frame = 3 Query: 6 FVNPSRSEVLCTTIAEALAMGKWVICARHPSNDFFSENFASCLAFSDEGEFMQCMKRALEEDVPKLPAENRNMLSWAAATERFLAAASRPEVPGRGTASKSARGLARLDKLMANFHSRAMKGRRGDLIRTALGGGPVARQAKYV 437 FVNPS SEVLCTT AEALAMGK+VI HPSN+FF +F +CL + +E EF+ A + + E L+W AAT+RF+ A++ + ++ G +LD+ +A FH+ KG+RGD++R LGGGPV+ Q KYV Sbjct: 484 FVNPSISEVLCTTTAEALAMGKFVIIPIHPSNEFFL-SFPNCLGYRNEFEFVASFHWAQNNEPLPMTTELAAKLTWEAATDRFIEASA---ITVEEAHNRKQHGQTKLDERIAWFHNELGKGKRGDMLRKLLGGGPVSDQVKYV 623
BLAST of mRNA_H-paniculata_contig10946.615.1 vs. uniprot
Match: A0A8J2SVG0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SVG0_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.990e-24 Identity = 69/155 (44.52%), Postives = 92/155 (59.35%), Query Frame = 3 Query: 3 IFVNPSRSEVLCTTIAEALAMGKWVICARHPSNDFFSENFASCLAFSDEGEFMQCMKRALEEDVPKLPAENRNMLSWAAATERFLAAASRPEVPGRGTASKSARGLARLDKLMANFHSRAMKGRRGDLIRTALGGG-PVARQAKYVRTLKQGGGG 464 + VNPS++EVLCTT+AEALAMGKWV+ ARHPSN+FF + F +CL+F + EF + A+ + P L + R LSWAAATERF A+ P S+ L +L H +G RGD+IR+ G G V RQ+ YVR ++ G Sbjct: 449 VLVNPSKTEVLCTTVAEALAMGKWVLIARHPSNEFFYD-FPTCLSFDSKKEFAEQFAYAVRHEPPPLSPKERRRLSWAAATERFCDASLMP----------SSIRLRFHQRLACFLHVHLGRGFRGDVIRSIAGAGLSVGRQSAYVRAKERAAAG 592 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10946.615.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10946.615.1 >prot_H-paniculata_contig10946.615.1 ID=prot_H-paniculata_contig10946.615.1|Name=mRNA_H-paniculata_contig10946.615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=210bp MGKWVICARHPSNDFFSENFASCLAFSDEGEFMQCMKRALEEDVPKLPAEback to top mRNA from alignment at H-paniculata_contig10946:982..7379- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10946.615.1 ID=mRNA_H-paniculata_contig10946.615.1|Name=mRNA_H-paniculata_contig10946.615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6398bp|location=Sequence derived from alignment at H-paniculata_contig10946:982..7379- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10946:982..7379- >mRNA_H-paniculata_contig10946.615.1 ID=mRNA_H-paniculata_contig10946.615.1|Name=mRNA_H-paniculata_contig10946.615.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1260bp|location=Sequence derived from alignment at H-paniculata_contig10946:982..7379- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |