mRNA_H-paniculata_contig10942.612.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10942.612.1 vs. uniprot
Match: D7FL55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL55_ECTSI) HSP 1 Score: 266 bits (681), Expect = 2.060e-73 Identity = 156/278 (56.12%), Postives = 175/278 (62.95%), Query Frame = 2 Query: 956 NYTENEGATATVLLFLLYGPAVASFT*CISFVSESASSAQNMVLFVNFVTDLALMVTFFVLNLVESTKDINAKLKWVYRLFPGVCLGDGLTQLV*CDQGKTCMDISSLEINEVPKELTPLSWNIAGADVLCLMACPLGYMALCLAIEYGKTFPKLRGILSPDPHVPIAPVPTQQSSGSNGYLPMESSTAVDSTDLLVEDEDVAAEAVRVDSMFSSPTIEDENGTEVVLKDLRKVYRTKQGPNVTVRKLSFAVAKGDCFGVSGINGAGKSTTLGILSGD 1789 +YT NE A+AT LLFLLYGPAVA FT CISF +SASSAQNMVLF+NFVT LALMVT FVLNLVEST+DINA LKW+YRLFPG CLGDGL QLV C GKTC+D+ SL + VPKELTP S I GAD+ CLMA + +DEDVAAEA RV+ M + E G EV+L +LRKVYRTKQGP V V+ LSF+VA+GDCFG GINGAGKSTTLGILSGD Sbjct: 1612 SYTTNESASATALLFLLYGPAVAPFTYCISFFFKSASSAQNMVLFINFVTGLALMVTSFVLNLVESTRDINASLKWIYRLFPGFCLGDGLAQLVLCKNGKTCVDVLSLGRDRVPKELTPFSAIITGADIACLMA-----------------------------------------------------------SCVEDDEDVAAEARRVEEM-EGVLRDGEGGGEVILNNLRKVYRTKQGPKVAVQGLSFSVARGDCFGFLGINGAGKSTTLGILSGD 1829
BLAST of mRNA_H-paniculata_contig10942.612.1 vs. uniprot
Match: A0A7R9U9S9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9S9_9STRA) HSP 1 Score: 211 bits (538), Expect = 4.740e-55 Identity = 132/283 (46.64%), Postives = 168/283 (59.36%), Query Frame = 2 Query: 947 QRSNYTENEGATATVLLFLLYGPAVASFT*CISFVSESASSAQNMVLFVNFVTDLALMVTFFVLNLVESTKDINAKLKWVYRLFPGVCLGDGLTQLV*CDQGKTCMDISSLEINEVPKELTPLSWNIAGADVLCLMACPLGYMALCLAIEYGKTFPKLRGIL--SPDPHVPIAPVPTQQSSGSNGYLPMESSTAVDSTDLLVEDEDVAAEAVRVDSMFSSPTIEDENGTEVVLKDLRKVYRTKQGPNVTVRKLSFAVAKGDCFGVSGINGAGKSTTLGILSGD 1789 Q NYT+N GA AT ++FLLYGPA A+FT +S+ +S SSAQN+VLF NF+T L LM+T FVLNL+EST+ IN LK+V+R+FP CLGDGL QL CD+GK C ++ E E+ K P ++ G +V+ LM + Y+A+ L IEY FP + + DP P L EDEDVAAEA RV + +G V L+ LRKV+ T GP V VRKLSF + +G+CFG GINGAGKSTTL ILSG+ Sbjct: 401 QIDNYTKNTGAAATAVIFLLYGPASAAFTYMLSYAFKSHSSAQNVVLFFNFITGLCLMITSFVLNLLESTQAINYYLKYVFRIFPIFCLGDGLAQLAVCDEGKDCYVVTK-EGYELGKMAGPFHLDVVGTNVVYLMVEIVVYLAITLGIEYSLQFPMILRFWQRTRDPQDPRG---------------------------LYEDEDVAAEANRVLDGGA-------DGDVVCLRQLRKVFPTPVGPKVAVRKLSFGIPRGECFGFLGINGAGKSTTLSILSGE 648
BLAST of mRNA_H-paniculata_contig10942.612.1 vs. uniprot
Match: A0A7S1UE30_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UE30_9STRA) HSP 1 Score: 182 bits (462), Expect = 5.900e-45 Identity = 113/279 (40.50%), Postives = 156/279 (55.91%), Query Frame = 2 Query: 956 NYTENEGATATVLLFLLYGPAVASFT*CISFVSESASSAQNMVLFVNFVTDLALMVTFFVLNLVESTKDINAKLKWVYRLFPGVCLGDGLTQLV*C-DQGKTCMDISSLEINEVPKELTPLSWNIAGADVLCLMACPLGYMALCLAIEYGKTFPKLRGILSPDPHVPIAPVPTQQSSGSNGYLPMESSTAVDSTDLLVEDEDVAAEAVRVDSMFSSPTIEDENGTEVVLKDLRKVYRTKQGPNVTVRKLSFAVAKGDCFGVSGINGAGKSTTLGILSGD 1789 N+ + +GA A + LLYGPA A+FT +S+ S S+AQN VLF NF+T L LM+T FVLN++E+T+++N L+++YRLFPG CLGD L Q+ C D G C+ ++ V + P ++AGA ++ L+ + YMA+ L IEY FP + I + G VED DVAAEA RV + + V L+ LRKV+ T GP V V+ +SF + +G+CFG GINGAGKSTTL ILSG+ Sbjct: 785 NFIQGQGALACAAVLLLYGPATAAFTYILSYGFSSHSTAQNFVLFFNFITGLCLMITSFVLNIIENTQEVNYSLRFLYRLFPGFCLGDALAQIAVCQDPGANCLRVT--RNGYVMSDAGPFDLDVAGASMIYLIVEVIVYMAITLGIEYSLQFPSV-----------IKYFQRVRDPGDASE---------------VEDTDVAAEAERVAGGGADDDV-------VRLERLRKVFPTPVGPKVAVKHMSFGIPRGECFGFLGINGAGKSTTLAILSGE 1028
BLAST of mRNA_H-paniculata_contig10942.612.1 vs. uniprot
Match: A0A4D9D786_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D786_9STRA) HSP 1 Score: 164 bits (416), Expect = 5.500e-39 Identity = 109/290 (37.59%), Postives = 161/290 (55.52%), Query Frame = 2 Query: 956 NYTENEGATATVLLFLLYGPAVASFT*CISFVSESASSAQNMVLFVNFVTDLALMVTFFVLNLVESTKDINAKLKWVYRLFPGVCLGDGLTQLV*CDQGKTCMDISSLEINEVPKELTPLSWNIAGADVLCLMACPLGYMALCLAIEYGKTFPKLRGILSPDPHVPIAPVPTQ------------QSSGSNGYLPMESSTAVDSTDLLVEDEDVAAEAVRVDSMFSSPTIEDENGTEVVLKDLRKVYRTKQGPNVTVRKLSFAVAKGDCFGVSGINGAGKSTTLGILSGD 1789 +YT + A VLLF+ + PA +FT +F S S+AQ +VLF+NF+T L L + FVL+L++ST+ IN KL++V+RLFP C GDGL QL C C I++ I+ + + LTPL W++ A+++ ++ L Y + L IE+ + P + + + P + T+ + G +E D +DEDV AEA RV S + D + L+ LRKV++T +GP V VR LSF + KG+ FG GINGAGK+TTL +LSG+ Sbjct: 1325 SYTTGQAGGAFVLLFIAFAPAATAFTYVWTFCFSSHSAAQTVVLFINFLTGLVLSIVSFVLSLIDSTRAINLKLRYVFRLFPPFCFGDGLLQLALCVDD-VCPKITAAGIS-ITEPLTPLHWDVTLANIIFMLVEALLYFLITLIIEHARAQPWIAALAAWRPKSWVLGRKTKLGPTRGHTRKSTEKGAQGGATDVEGGEEDD-----YDDEDVKAEAERV-LCGESRRVND----VIRLEALRKVFQTARGPKVAVRGLSFGIPKGETFGFLGINGAGKTTTLSMLSGE 1602
BLAST of mRNA_H-paniculata_contig10942.612.1 vs. uniprot
Match: A0A7S2IKK8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2IKK8_9DINO) HSP 1 Score: 160 bits (404), Expect = 1.170e-37 Identity = 102/270 (37.78%), Postives = 145/270 (53.70%), Query Frame = 2 Query: 983 ATVLLFLLYGPAVASFT*CISFVSESASSAQNMVLFVNFVTDLALMVTFFVLNLVESTKDINAKLKWVYRLFPGVCLGDGLTQLV*CDQGKTCMDISSLEINEVPKELTPLSWNIAGADVLCLMACPLGYMALCLAIEYGKTFPKLRGILSPDPHVPIAPVPTQQSSGSNGYLPMESSTAVDSTDLLVEDEDVAAEAVRVDSMFSSPTIEDENGTEVV-LKDLRKVYRTKQG-PNVTVRKLSFAVAKGDCFGVSGINGAGKSTTLGILSG 1786 A ++LF+ YG ++A FT +SF +SAQ + L +NFVT L L++ ++LN++ESTKD+N KL+WVYRLFPG CLG GL Q+ C T + L ++ P L +W AG D L Y + + I+Y + P DP P + G+ +DEDVA+EA RV + P ++VV + RKVYRT +G P V V LSF +A+G+CFG GINGAGK++T+ +L+G Sbjct: 366 AVIVLFIGYGVSIAPFTYAMSFAFSKHTSAQILCLVINFVTGLLLLIVSYILNVIESTKDVNEKLEWVYRLFPGFCLGHGLLQI--CTASNTAAQAAELHLHVSPNFL---AWKCAGEDAFALFLLAPIYFVVVVVIDYLRHSPLAAAARHLDPQAAGNP----NAGGA-------------------DDEDVASEAARVRAQPGGPA------SDVVRIAGFRKVYRTPEGLPKVAVHDLSFGLARGECFGFLGINGAGKTSTMNMLTG 601
BLAST of mRNA_H-paniculata_contig10942.612.1 vs. uniprot
Match: A0A835ZC34_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC34_9STRA) HSP 1 Score: 156 bits (394), Expect = 3.940e-36 Identity = 118/296 (39.86%), Postives = 150/296 (50.68%), Query Frame = 2 Query: 1004 LYGPAVASFT*CISFVSESASSAQNMVLFVNFVTDLALMVTFFVLNLVESTKDINAKLKWVY-------------RLFPGVCLGDGLTQLV*CDQGKTCMDIS-----SLEINEVPKELTPLSWNIAGADVLCLMACPLGYMALCLAIEYGKTFPKLRGILSPDPHVPIAPVPTQQSSGSNGYLPMESSTAVDSTDLLVEDEDVAAEAVRVDSM--FSSPTIEDENGTE---VVLKDLRKVYRTKQGPNV-------------TVRKLSFAVAKGDCFGVSGINGAGKSTTLGILS 1783 LYGPAVA FT C+SF +S SSAQN+VL +NF+T LALMVT FVL+L++ST+ N +L+W Y RLFPG CLGDGL QLV C G TC + SLE P + ++AGAD+ L A + Y A+ LAIE ++P+L L PD D DVAAEA RV + + + +D G + V + LRKVY QG V VR+LS V +G+CFG+ GINGAGK+T L LS Sbjct: 1623 LYGPAVAPFTYCLSFAFDSHSSAQNVVLLLNFLTGLALMVTSFVLSLLDSTRATNLRLRWFYSMXXXXXXXXXXXRLFPGFCLGDGLAQLVLCTDGHTCPKLDPDTGFSLETQG------PFAPDVAGADIAFLAAECVVYFAITLAIEAALSYPRLASWLQPD------------------------------------DPDVAAEAQRVLHLPPYDNDNDDDGGGKDEDVVRIVGLRKVYL--QGVGVPTACGGGGARGKQAVRELSLGVRRGECFGLLGINGAGKTTALATLS 1874
BLAST of mRNA_H-paniculata_contig10942.612.1 vs. uniprot
Match: A0A7S1R4D9_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1R4D9_ALECA) HSP 1 Score: 155 bits (391), Expect = 4.270e-36 Identity = 99/277 (35.74%), Postives = 148/277 (53.43%), Query Frame = 2 Query: 959 YTENEGATATVLLFLLYGPAVASFT*CISFVSESASSAQNMVLFVNFVTDLALMVTFFVLNLVESTKDINAKLKWVYRLFPGVCLGDGLTQLV*CDQGKTCMDISSLEINEVPKELTPLSWNIAGADVLCLMACPLGYMALCLAIEYGKTFPKLRGILSPDPHVPIAPVPTQQSSGSNGYLPMESSTAVDSTDLLVEDEDVAAEAVRVDSMFSSPTIEDENGTEVVLKDLRKVYRTKQG-PNVTVRKLSFAVAKGDCFGVSGINGAGKSTTLGILSG 1786 + N A+ ++F+ YG A+A F+ +SF+ ++AQ + L +NFVT L LM+T ++L+ +E TK++N L W+YR+FPG CLG GL Q+ C + + + ++ LSW++AG D L Y AL + ++Y H P+A T+ ++G +E D DVAAEA RV S + +G + L LRKVYRT +G P V VR LSF + +G+CFG GINGAGK++TL +L+G Sbjct: 234 FVRNGALWASFVVFMGYGLAIAPFSYLLSFLFSKHTTAQILCLVINFVTGLILMITSYILSAIEDTKEVNRSLMWLYRIFPGFCLGHGLFQI--------CTNSVAATTFGIEDKIDLLSWDVAGKDAAFLYLAAPTYFALAVLVDYLL-------------HSPLAAASTRFDPHADGAAGLEDEDG---------DADVAAEAARVASGAA-------DGDVIRLDRLRKVYRTPEGRPKVAVRGLSFGLPRGECFGFLGINGAGKTSTLNMLTG 473
BLAST of mRNA_H-paniculata_contig10942.612.1 vs. uniprot
Match: A0A6H5J6A2_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J6A2_9PHAE) HSP 1 Score: 153 bits (386), Expect = 3.290e-35 Identity = 103/219 (47.03%), Postives = 129/219 (58.90%), Query Frame = 1 Query: 73 SRTFFNQPSLELSPGNNYSTGMPVAPRNPVPLTAPQEP-SLSRSVGDRLDGVSVPGMGVFTA---GVVVDDMFAGCAQGDSPLVNMNDFLLKPPSAEEQGASR*GAIVLDKSLHLPSEVVANDSAL---------------------LAFGVLVNASAVHAAPIFMNLVNSAALQAIT-DAVGSRGHNKEAADDE----GQRNAALAMGDGDGSGELPS 639 SR+ F+QPSL LSP N++ G P RNPVP+ AP++P SL+R V DR DG+SV G + G ++D F GCAQG SPLV M+DFLL+ A+EQGASR GAIVLD S LP+ L LA+GVL+NASAVHAAPIF+NLVNSAALQA+ D+ ++G A +E G+ A A D + LPS Sbjct: 1313 SRSMFDQPSLLLSPATNFNPGKPSRVRNPVPMDAPEDPESLARKVADRFDGISVEGTSILLPPGEGPSIEDQFGGCAQGASPLVYMSDFLLQGAGADEQGASRYGAIVLDNSSCLPTMTPRQRLGLKEDRYLHGLFQNHSTNHSDGSLAYGVLINASAVHAAPIFVNLVNSAALQAVVADSGDTKGREGVAVGEERSDAGEEKTAAAAAAADTA--LPS 1529
BLAST of mRNA_H-paniculata_contig10942.612.1 vs. uniprot
Match: A0A813JRP4_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JRP4_POLGL) HSP 1 Score: 147 bits (371), Expect = 9.030e-35 Identity = 108/272 (39.71%), Postives = 148/272 (54.41%), Query Frame = 2 Query: 983 ATVLLFLLYGPAVASFT*CISFVSESASSAQNMVLFVNFVTDLALMVTFFVLNLVESTKDINAKLKWVYRLFPGVCLGDGLTQLV*CDQGKTCMDISSLEINEVPKELTPLSWNIAGADVLCLMACPLGYMALCLAIEYGKTFPKLRGILSP--DPHVPIAPVPTQ-QSSGSNGYLPMESSTAVDSTDLLVEDEDVAAEAVRVDSMFSSPTIEDENGTEVVLKDLRKVYRTKQG-PNVTVRKLSFAVAKGDCFGVSGINGAGKSTTLGILSG 1786 A+ + FL YG A+A F+ +SF+ E S+AQ + L +NFVT L LM+ ++LN + STKD+N L W+YRLFPG CLG GL ++ C + +VP +L L W++AG DVL L Y L + ++Y P L S DP V A P+ + GS+ P E V D DV E+ RV S + + + L+ LRKVYRT +G P V V LSF + KG+CFG GINGAGK++TL +L+G Sbjct: 20 ASFVTFLGYGLAIAPFSYLLSFLFEKHSTAQVLSLVINFVTGLLLMLVSYILNEISSTKDVNESLMWIYRLFPGFCLGHGLLEI--CTNSLAASQLGL----DVPLDL--LGWDVAGKDVLYLFISAPCYFFLAVLVDYLAHSP-LHAAASRHFDPQVEAAGRPSLGEELGSD---PDE-----------VGDGDVVVESARVLSGAADSDV-------IRLEGLRKVYRTPEGIPKVAVHGLSFGLQKGECFGFLGINGAGKTSTLNMLTG 261
BLAST of mRNA_H-paniculata_contig10942.612.1 vs. uniprot
Match: A0A813FDZ4_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FDZ4_POLGL) HSP 1 Score: 147 bits (371), Expect = 3.030e-33 Identity = 108/272 (39.71%), Postives = 148/272 (54.41%), Query Frame = 2 Query: 983 ATVLLFLLYGPAVASFT*CISFVSESASSAQNMVLFVNFVTDLALMVTFFVLNLVESTKDINAKLKWVYRLFPGVCLGDGLTQLV*CDQGKTCMDISSLEINEVPKELTPLSWNIAGADVLCLMACPLGYMALCLAIEYGKTFPKLRGILSP--DPHVPIAPVPTQ-QSSGSNGYLPMESSTAVDSTDLLVEDEDVAAEAVRVDSMFSSPTIEDENGTEVVLKDLRKVYRTKQG-PNVTVRKLSFAVAKGDCFGVSGINGAGKSTTLGILSG 1786 A+ + FL YG A+A F+ +SF+ E S+AQ + L +NFVT L LM+ ++LN + STKD+N L W+YRLFPG CLG GL ++ C + +VP +L L W++AG DVL L Y L + ++Y P L S DP V A P+ + GS+ P E V D DV E+ RV S + + + L+ LRKVYRT +G P V V LSF + KG+CFG GINGAGK++TL +L+G Sbjct: 1266 ASFVTFLGYGLAIAPFSYLLSFLFEKHSTAQVLSLVINFVTGLLLMLVSYILNEISSTKDVNESLMWIYRLFPGFCLGHGLLEI--CTNSLAASQLGL----DVPLDL--LGWDVAGKDVLYLFISAPCYFFLAVLVDYLAHSP-LHAAASRHFDPQVEAAGRPSLGEELGSD---PDE-----------VGDGDVVVESARVLSGAADSDV-------IRLEGLRKVYRTPEGIPKVAVHGLSFGLQKGECFGFLGINGAGKTSTLNMLTG 1507 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10942.612.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10942.612.1 >prot_H-paniculata_contig10942.612.1 ID=prot_H-paniculata_contig10942.612.1|Name=mRNA_H-paniculata_contig10942.612.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=176bp MDISSLEINEVPKELTPLSWNIAGADVLCLMACPLGYMALCLAIEYGKTFback to top mRNA from alignment at H-paniculata_contig10942:2403..8342+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10942.612.1 ID=mRNA_H-paniculata_contig10942.612.1|Name=mRNA_H-paniculata_contig10942.612.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5940bp|location=Sequence derived from alignment at H-paniculata_contig10942:2403..8342+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10942:2403..8342+ >mRNA_H-paniculata_contig10942.612.1 ID=mRNA_H-paniculata_contig10942.612.1|Name=mRNA_H-paniculata_contig10942.612.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1056bp|location=Sequence derived from alignment at H-paniculata_contig10942:2403..8342+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |