mRNA_H-paniculata_contig10886.571.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10886.571.1 vs. uniprot
Match: D8LRI4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRI4_ECTSI) HSP 1 Score: 292 bits (748), Expect = 1.000e-88 Identity = 133/154 (86.36%), Postives = 144/154 (93.51%), Query Frame = 1 Query: 16 TQGAAFSGEVVLNRCDPWWLRCVGGGARHHLYPVHVSGCVLSTPSLSAALYLMLSRFVSGQFEQVFSMVEGCVTDLPLGKEEAACLRWLGHLEHDHHPDAVACRIKLSLAAAPCPEMSNVLPWDLVEQAHLYVTRRGHVSARCRLSPEEELLML 477 ++G FSGEVVLNRCD WWLRCVG GARHHLYPVHVSGC+LSTPSLSAALYL++SRFV+GQ+EQ FSMVEGCVTDLPLGKEEA LRWLGHLEHDHHPDAV+CR+KLSLAAAPCPEMS VLPWD+ EQAHLYVTRRGHVSA CRLSPEEELL+L Sbjct: 2171 SKGTPFSGEVVLNRCDSWWLRCVGDGARHHLYPVHVSGCLLSTPSLSAALYLLVSRFVAGQYEQAFSMVEGCVTDLPLGKEEAGSLRWLGHLEHDHHPDAVSCRLKLSLAAAPCPEMSAVLPWDIAEQAHLYVTRRGHVSAHCRLSPEEELLVL 2324
BLAST of mRNA_H-paniculata_contig10886.571.1 vs. uniprot
Match: A0A835Z7Z7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Z7_9STRA) HSP 1 Score: 178 bits (452), Expect = 6.790e-49 Identity = 85/146 (58.22%), Postives = 102/146 (69.86%), Query Frame = 1 Query: 40 EVVLNRCDPWWLRCVGGGARHHLYPVHVSGCVLSTPSLSAALYLMLSRFVSGQFEQVFSMVEGCVTDLPLGKEEAACLRWLGHLEHDHHPDAVACRIKLSLAAAPCPEMSNVLPWDLVEQAHLYVTRRGHVSARCRLSPEEELLML 477 +VV NR D WL +G RH+LYPVH S +LSTPSL+AALYL+L RF++ Q+ VFSMVE CVTDL L EEA WLG L DH PDAVACR+++S PC EMS++ PWDL EQ +Y R +VSA CRLS EEEL +L Sbjct: 2936 DVVFNRGDARWLTALGNDVRHYLYPVHPSETMLSTPSLAAALYLLLMRFMARQYADVFSMVESCVTDLKLSPEEAQIFAWLGSLRGDHQPDAVACRLRISKLIGPCHEMSSICPWDLAEQVEMYAARHMYVSAACRLSIEEELSLL 3081
BLAST of mRNA_H-paniculata_contig10886.571.1 vs. uniprot
Match: A0A2R5FYY4_9STRA (Calmodulin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FYY4_9STRA) HSP 1 Score: 133 bits (334), Expect = 5.140e-33 Identity = 71/149 (47.65%), Postives = 92/149 (61.74%), Query Frame = 1 Query: 31 FSGEVVLNRCDPWWLRCVGGGARHHLYPVHVSGCVLSTPSLSAALYLMLSRFVSGQFEQVFSMVEGCVTDLPLGKEEAACLRWLGHLEHDHHPDAVACRIKLSLAAAPCPEMSNVLPWDLVEQAHLYVTRRGHVSARCRLSPEEELLML 477 F+ E+VLNR P W +G RH+LY VH+S L TP+LS+ALYL L RF++ +++ F + + CVTD PL EE L LG L D HPDA ACR+KLSL + LPWDLV++ LY + V+A CRLS EEL +L Sbjct: 2044 FATELVLNRTSPEWNANLGD-VRHYLYSVHLSKMFLFTPTLSSALYLFLLRFMARRYDLAFRLADSCVTDTPLTAEEDQILDLLGSLNFDMHPDAHACRLKLSLVTLGARSIMR-LPWDLVQEMSLYAIKHRRVAASCRLSVSEELTLL 2190
BLAST of mRNA_H-paniculata_contig10886.571.1 vs. uniprot
Match: A0A7S4CZ16_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CZ16_9EUGL) HSP 1 Score: 117 bits (294), Expect = 1.680e-30 Identity = 63/149 (42.28%), Postives = 86/149 (57.72%), Query Frame = 1 Query: 31 FSGEVVLNRCDPWWLRCVGGGARHHLYPVHVSGCVLSTPSLSAALYLMLSRFVSGQFEQVFSMVEGCVTDLPLGKEEAACLRWLGHLEHDHHPDAVACRIKLSLAAAPCPEMSNVLPWDLVEQAHLYVTRRGHVSARCRLSPEEELLML 477 F V+ + + W R +G RH+LYP+H+SG L TP+ +A+LYL+L RF++ Q+E VF M V+D PL EE L L+ D HPDA ACR+KLSLA + PWD+ + Y +R VSA CRL+ EE +L Sbjct: 17 FGSHVIFDHTNDGWSRHLGD-TRHYLYPIHLSGAFLFTPNFAASLYLLLLRFLNRQYEAVFQMAPATVSDTPLTSEEQQIWDQLACLQTDFHPDAHACRLKLSLAMMGDNSVM-ACPWDMAAEMAQYCRKRAFVSAACRLTVPEETRIL 163
BLAST of mRNA_H-paniculata_contig10886.571.1 vs. uniprot
Match: A0A7S1U856_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U856_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.660e-29 Identity = 59/153 (38.56%), Postives = 99/153 (64.71%), Query Frame = 1 Query: 19 QGAAFSGEVVLNRCDPWWLRCVGGGARHHLYPVHVSGCVLSTPSLSAALYLMLSRFVSGQFEQVFSMVEGCVTDLPLGKEEAACLRWLGHLEHDHHPDAVACRIKLSLAAAPCPEMSNVLPWDLVEQAHLYVTRRGHVSARCRLSPEEELLML 477 Q A FS +++L+R + WL + G +RH+++P+H + L+TP+L++ALYLML RF++ ++ VF + + CV+D L EE L +D HPDA ACR+K+SLA + + + V PW L E+ Y+++R +V++ C+L+ EE+ +L Sbjct: 174 QDAPFSTDLLLDRNNQAWLENMSG-SRHYVFPIHSTRLFLTTPTLASALYLMLCRFLARDYQAVFRLADSCVSDQQLNAEEEQIFEQLEFCNYDSHPDAHACRLKISLATSGSTD-AMVCPWTLGEELQFYISKRRYVTSECQLTTYEEMQLL 324
BLAST of mRNA_H-paniculata_contig10886.571.1 vs. uniprot
Match: A0A7S4ADD8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ADD8_9STRA) HSP 1 Score: 119 bits (298), Expect = 3.040e-29 Identity = 64/157 (40.76%), Postives = 96/157 (61.15%), Query Frame = 1 Query: 10 ISTQGAAFSGEVVLNRCDPWWLRCVGGGARHHLYPVHVSGCVLSTPSLSAALYLMLSRFVSGQFEQVFSMVEGCVTDLPLGKEEAACLRWLGHLEHDHHPDAVACRIKLSLAAAPCPEMSNV-LPWDLVEQAHLYVTRRGHVSARCRLSPEEELLML 477 + T G+ S +V+L+R + W+ +G R +LYP+H S L TPSL+++LYLML F++G ++ V+ M+E CV++ L EE L L +D+HPDA ACR+KLS+ E S + PW + E+ Y + VS+ CRL+ EEELL+L Sbjct: 24 LHTDGSRLSVQVLLDRRNQEWIDNIGE-VRCYLYPIHNSRSFLVTPSLASSLYLMLMHFITGSYQDVYKMMESCVSE-ELTPEEQQIFNQLEFLGNDYHPDAHACRLKLSVVTVGLGEESTMKCPWSVAEEMEEYAKKHVFVSSACRLTTEEELLLL 178
BLAST of mRNA_H-paniculata_contig10886.571.1 vs. uniprot
Match: A0A1Z5J633_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J633_FISSO) HSP 1 Score: 121 bits (304), Expect = 5.570e-29 Identity = 66/157 (42.04%), Postives = 95/157 (60.51%), Query Frame = 1 Query: 10 ISTQGAAFSGEVVLNRCDPWWLRCVGGGARHHLYPVHVSGCVLSTPSLSAALYLMLSRFVSGQFEQVFSMVEGCVTDLPLGKEEAACLRWLGHLEHDHHPDAVACRIKLSLAAAPCPEMSNV-LPWDLVEQAHLYVTRRGHVSARCRLSPEEELLML 477 + G+ S +V+L+R + W +G R +LYP+H S L TPSL+++LYLML F++G + +VF MVE CV++ L EE L L +D HPDA ACR+KLS+ S + PW + E+ YV + G+VS+ CRL+ EEELL+L Sbjct: 2021 LHVDGSHLSVQVILDRRNKDWNNNIGE-VRSYLYPIHNSQSFLVTPSLASSLYLMLMYFITGLYAEVFKMVESCVSE-ELNAEEQQIFNQLEFLGNDFHPDAHACRLKLSVVTVGLGSESTMKCPWSISEEMEAYVKKHGYVSSACRLTTEEELLLL 2175
BLAST of mRNA_H-paniculata_contig10886.571.1 vs. uniprot
Match: A0A7S4SGT1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SGT1_9STRA) HSP 1 Score: 113 bits (283), Expect = 1.580e-28 Identity = 66/157 (42.04%), Postives = 92/157 (58.60%), Query Frame = 1 Query: 10 ISTQGAAFSGEVVLNRCDPWWLRCVGGGARHHLYPVHVSGCVLSTPSLSAALYLMLSRFVSGQFEQVFSMVEGCVTDLPLGKEEAACLRWLGHLEHDHHPDAVACRIKLSLAAAPCPEMSNV-LPWDLVEQAHLYVTRRGHVSARCRLSPEEELLML 477 + T G+ S +VVL+R W+ +G +H YPVH S L TPSL++++YLM+ F++G + +VF MVE CV++ L EE L L +D HPDA ACR+KLS S + PW + E+ V + +VSA CRLS EEELL+L Sbjct: 51 LHTDGSHLSVQVVLDRRKQDWIDNIGEVRCYH-YPVHNSKAFLFTPSLASSMYLMVLYFITGSYHEVFKMVESCVSE-ELSAEELQIFNQLEFLGNDFHPDAHACRLKLSAITVGLGAKSAMKCPWSVREEMTECVRKHAYVSAACRLSAEEELLLL 205
BLAST of mRNA_H-paniculata_contig10886.571.1 vs. uniprot
Match: A0A1E7FQQ5_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQQ5_9STRA) HSP 1 Score: 120 bits (300), Expect = 1.920e-28 Identity = 64/157 (40.76%), Postives = 97/157 (61.78%), Query Frame = 1 Query: 10 ISTQGAAFSGEVVLNRCDPWWLRCVGGGARHHLYPVHVSGCVLSTPSLSAALYLMLSRFVSGQFEQVFSMVEGCVTDLPLGKEEAACLRWLGHLEHDHHPDAVACRIKLSLAAAPCPEMSNV-LPWDLVEQAHLYVTRRGHVSARCRLSPEEELLML 477 + T G+ S +V+L+R + W+ +G R +LYP+H S L TPSLS++LYLML F++G ++ V+ M+E CV++ L EE L L +D+HPDA ACR+KLS+ E S + PW++ E+ Y + VS+ CRL+ EEE+L+L Sbjct: 2088 LHTDGSRLSVQVLLDRRNQEWIDNIGE-VRCYLYPIHNSRSFLVTPSLSSSLYLMLMHFITGSYQNVYKMMESCVSE-ELTPEEQQIFNQLEFLGNDYHPDAHACRLKLSVVTVGLGEESTMKCPWNVAEEMEEYAKKHVFVSSACRLTTEEEMLLL 2242
BLAST of mRNA_H-paniculata_contig10886.571.1 vs. uniprot
Match: A0A7S1BEI6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BEI6_9STRA) HSP 1 Score: 119 bits (298), Expect = 3.570e-28 Identity = 64/156 (41.03%), Postives = 97/156 (62.18%), Query Frame = 1 Query: 10 ISTQGAAFSGEVVLNRCDPWWLRCVGGGARHHLYPVHVSGCVLSTPSLSAALYLMLSRFVSGQFEQVFSMVEGCVTDLPLGKEEAACLRWLGHLEHDHHPDAVACRIKLSLAAAPCPEMSNVLPWDLVEQAHLYVTRRGHVSARCRLSPEEELLML 477 + + G+ S +++L+R + W+ +G R +LYPVH S L TPSLS+++YLML F+ G +++VF MV+ CV++ L +EE L L +D HPDA ACR+KLS + V PW ++++ YV + HVS+ CR+SP EELL+L Sbjct: 2146 LHSNGSRLSVQLILDRRNEEWINNLGE-VRTYLYPVHSSRAFLVTPSLSSSMYLMLLYFLIGNYKEVFKMVDSCVSE-ELTEEELQIFNQLEFLGNDCHPDAHACRLKLSAVTVGLGDCM-VCPWSVLDEFVQYVRKHDHVSSSCRISPNEELLLL 2298 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10886.571.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10886.571.1 >prot_H-paniculata_contig10886.571.1 ID=prot_H-paniculata_contig10886.571.1|Name=mRNA_H-paniculata_contig10886.571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=159bp MYAISTQGAAFSGEVVLNRCDPWWLRCVGGGARHHLYPVHVSGCVLSTPSback to top mRNA from alignment at H-paniculata_contig10886:1601..2624- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10886.571.1 ID=mRNA_H-paniculata_contig10886.571.1|Name=mRNA_H-paniculata_contig10886.571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1024bp|location=Sequence derived from alignment at H-paniculata_contig10886:1601..2624- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10886:1601..2624- >mRNA_H-paniculata_contig10886.571.1 ID=mRNA_H-paniculata_contig10886.571.1|Name=mRNA_H-paniculata_contig10886.571.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=954bp|location=Sequence derived from alignment at H-paniculata_contig10886:1601..2624- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |