mRNA_H-paniculata_contig10867.554.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig10867.554.1
Unique NamemRNA_H-paniculata_contig10867.554.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: D7FWQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWQ3_ECTSI)

HSP 1 Score: 199 bits (506), Expect = 3.430e-53
Identity = 115/309 (37.22%), Postives = 172/309 (55.66%), Query Frame = 2
Query:  203 NKCWVFLHLERNGGTTIKKILYRRWKIAYDFYDNDQWQGGDVIAAKYAERLLVDRQLRVIAGEHAEGLRSM--VGDRCKWFTVFRHPVSQLVSAYFYCKQRPHKLGCAYEHSDKREEDLVMFAKHRGNLSFQQFMLNYVTFSELIDDAV---EASSVEEFGGLQTGPGWNILKRYLKRLPK-----------------------AAVRDMLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNSNIQMKNLQYHIQEHELLTDPLIYSKVKKYIELDLSLYEHAVTTFNHQKEVYGI 1045
            ++CWVF+HL++ GG+T+K +L R +   Y  YD++QW+ GD I+A +  +L       V+AG + E LR    V   C++FT+FRHP++++VSAYFYC+       CA E  D ++ DL+ FAKH GN + +QF L +V  S+ + + +   EA ++ +F  L+   GW  LK YL+R  K                       A + D+L P   ++ + Y AVGILEQ++ TL LF+ ALE+P + W   F     Q  + +    E E L      S++KKY+ LDL LYEHAV  F+ Q   YG+
Sbjct:  154 DQCWVFMHLQKCGGSTVKYMLRRSYGSRYSIYDSNQWKLGDDISANFGVKLARGETWNVMAGGYTEALRRSEPVDAGCRFFTLFRHPIARMVSAYFYCRSTLGDAACASEVVDAKDVDLLTFAKHWGNFAVRQFALGFVP-SDGVQEYIRTPEAQALHDFD-LKKIAGWYQLKMYLERPEKGDWGVPGQSEAMTVEHDAAATLEAPLYDLLQPAMDLIRSGYVAVGILEQWNTTLHLFDHALEIPGMYWGAQFAEGGKQRVDYKNKRLESETLKQAWTDSELKKYMRLDLLLYEHAVDVFHEQARGYGL 460          
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: D7G715_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G715_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 3.850e-52
Identity = 109/303 (35.97%), Postives = 162/303 (53.47%), Query Frame = 2
Query:  203 NKCWVFLHLERNGGTTIKKILYRRWKIAYDFYDNDQWQGGDVIAAKYAERLLVDRQLRVIAGEHAEGLRSMVGDR-------CKWFTVFRHPVSQLVSAYFYCKQRPHKLGCAYEHSDKREEDLVMFAKHRGNLSFQQFMLNYVTFSELIDDAVEASSVEEFG----GLQTGPGWNILKRYLKRLPKAAVRD-----------MLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNSNIQMKNLQYHIQEHELLTDPLIYSKVKKYIELDLSLYEHAVTTFNHQKEVYGI 1045
            N+CW+F HL++ GGTT+K++L+  W      YD+ QW+ G   A   A  L         AG + E LR     +       C+WFTVFRHPVS+LVSAY+YC++ P    CA E    R  DLV FA+H GN + +QF L +V+  ++ D  V  +     G     ++  PGW +LK +L    ++ V D           M  P+  +L +NY  VGILE ++ TL LF+ AL+MP + W++ F  S     + ++  ++ ++L   L   ++ K++ LDL LY  AV  FN Q+  YGI
Sbjct:   86 NRCWIFNHLQKAGGTTVKRLLFDSWGSESTTYDSYQWKKGQGYAESVAASLASPAGWSAAAGGYLEALRRTPAFQPDDERTPCRWFTVFRHPVSRLVSAYYYCREDPSDQLCASEFVSSRNVDLVTFARHWGNFALRQFALGFVSHDKVKDFLVSPNGGGAMGLTAEQVELMPGWYMLKLFLN--DRSGVADDTSPEGTRLEYMFRPVVDLLRDNYAVVGILEDWNATLSLFDSALDMPGMTWREEFERSGKLNVDTRFKGEKQDVLQQALSDPEIVKHLSLDLRLYGQAVDIFNQQRHSYGI 386          
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: D7G716_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G716_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 6.020e-50
Identity = 103/288 (35.76%), Postives = 166/288 (57.64%), Query Frame = 2
Query:  206 KCWVFLHLERNGGTTIKKILYRRWKIAYDFYDNDQWQGGDVIAAKYAERLLVDRQLRVIAGEHAEGLR--SMVGDRCKWFTVFRHPVSQLVSAYFYCKQRPHKLGCAYEHSDKREEDLVMFAKHRGNLSFQQFMLNYVTFSELIDDAVEA---SSVEEFGGLQTGPGWNILKRYLKRLPKAAVRDMLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNS---NIQMKNLQYHIQEHELLTDPLIYSKVKKYIELDLSLYEHAVTTFNHQKEVYGI 1045
            +CWVF+HL++ GG+T+K +L  RW   +  YD+ +W+ GD  +AK+  +L +  +  V+ G + E LR    VG  C++FT+FRHP++++VSAYFYC+     + CA E    ++ DL+ FAKH GN + +QF L +V   ++ +  ++       +E GG+          +     P A + ++L P   ++ + Y AVGILEQ++ TL LF+  L+MP + W++ F  S   ++ + N Q  I   E L      S++KKY+ LDL LYEHAV  F+ Q   +G+
Sbjct:  176 QCWVFMHLQKCGGSTVKDLLEDRWGSRFFIYDSMRWKFGDEFSAKFGAKLALGDKWNVMTGGYTEALRLSEPVGAGCRFFTLFRHPIARMVSAYFYCRSVSGDVACASEVMQAKDVDLLTFAKHWGNFALRQFALGFVPSDDVQEYQLKMYLERPQKEDGGVLGQREAMTAHQDAAATPDAPLYELLQPAMDLVRDGYVAVGILEQWNTTLRLFDHTLDMPVMNWEEQFAESGKHHVDIVNKQLEI---ETLQQAWTDSELKKYMRLDLLLYEHAVDVFHQQARSHGL 460          
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: D7FS84_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS84_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 2.420e-41
Identity = 100/305 (32.79%), Postives = 160/305 (52.46%), Query Frame = 2
Query:  227 LERNGGTTIKKILY---RRWKIAYDFYDNDQWQGGDVIAAKYAERLLVDRQLRVIAGEHAEGLRSMVG---DRCKWFTVFRHPVSQLVSAYFYCKQRPHKLGCAYEHSDKREED--LVMFAKHRGNLSFQQFMLNYVTFSELIDDAVEASSV---EEFGGLQTGPGWNILKRYLKRL---------------------PKAAVRDMLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNSNIQMKNLQYHIQEHELLTDPLIYSKVKKYIELDLSLYEHAVTTFNHQKEVYGI 1045
            + + GG+T+K +L    +   +    YD+ QW  G      +A+  L D    ++ G + EGLR   G     CKWFT+FRHP+ +LVSAYFYCK++P    CA    D   +D  L  FA+H G+   +QF L +V   EL+ + V+  +      + G ++ PGW  LK YL++                        A +  +L P++++L N Y AVG+LEQ++ +L LFN AL MP  +W + F +   +  +  +H +E E+L       ++++Y+ LDL LY++AV+  N Q + YG+
Sbjct:    1 MNKAGGSTVKYMLAPWTKAQNVTVGLYDSPQWLEGK----DFAQDFLGDEN-SLMWGAYTEGLRPFGGLGLRECKWFTIFRHPIPRLVSAYFYCKKKPQDGLCATVALDANADDTDLYAFAEHWGDFGLRQFALAFVLPEELLANKVKYDATGICTPYHGKRSCPGWYELKLYLQQQLDEQEQGEGSRGWDGSGAAASGAATISHLLQPVQELLTNEYAAVGVLEQWETSLLLFNEALGMPGFDWPETFGSIGKKNSDGTFHNEEAEMLLRSWTDPRLRRYLSLDLLLYDYAVSVHNQQVDKYGL 300          
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: A0A6H5JY77_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY77_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 3.680e-38
Identity = 97/296 (32.77%), Postives = 149/296 (50.34%), Query Frame = 2
Query:  209 CWVFLHLERNGGTTIKKILY---RRWKIAYDFYDNDQWQGGDVIAAKYAERLLVDRQLRVIAGEHAEGLRSMVGDR-CKWFTVFRHPVSQLVSAYFYCKQRPHKLGCAYEHSDKREEDLVMFAKHRGNLSFQQFMLNYVTFSELIDDAVEASSVEEFGGLQTG--PGWNILKRYLK----------RLPKAAVRDMLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNSNIQMKN-LQYHIQEHELLTDPLIYSKVKKYIELDLSLYEHAVTTFNHQKEVYGI 1045
            CWVF H+ ++GG T++K++        ++   +D+ +W  G      YAE  + +  +    G + EGLR M  DR CKWFTVFRHPVS++VSAYFYC++  H   CA    D  + DL+ FA+H GN   +QF L  +   ++  + V +   ++  G      P W   K YL             P++ +   L   ++ L   Y AVGI+E++D ++ELFNR L +   +W K F  S  +     Q+       L       ++KK+I LD+ LY+HA++    Q    GI
Sbjct:   52 CWVFSHMNKSGGMTVRKMIMPFLTEKGVSTALFDDIEWSSG----RSYAETFVKENAVFTYGG-YTEGLR-MYDDRDCKWFTVFRHPVSRVVSAYFYCQRAHHDQLCAAVVLDASKVDLLTFAEHWGNYGLRQFALASIKAEDVFHNEVVSEFCQQARGHGDVCIPAWYRQKHYLHLPHQDDFCGPTQPESGLAQFLSSAQETLSTRYAAVGIIEEWDNSMELFNRVLNLRRFDWVKEFQKSGKKNSGGSQFETASKSALKAAWHSPELKKFIWLDILLYDHALSVHRSQVADLGI 341          
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: A0A6H5JNJ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ0_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 6.150e-32
Identity = 98/308 (31.82%), Postives = 150/308 (48.70%), Query Frame = 2
Query:  209 CWVFLHLERNGGTTIKKILY-----RRWKIAYDFYDNDQWQGGDVIAAKYAERLLVDRQLRVIAGEHAEGLRSMVGDRCKWFTVFRHPVSQLVSAYFYCKQRPHKLGCAYEHSDKREEDLVMFAKHRGNLSFQQFMLNYVTFSELIDDAVEASSVEEFGGLQTGPGWNILKRYLK-------RLPKAAVR------------DMLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNSNIQMKNLQYHIQEHELL-----TDPLIYSKVKKYIELDLSLYEHAVTTFNHQKEVYGI 1045
            CWVF H  + GGTT+K  L      R   +A     +D +  GD    K  + LL D+ + +IAG +AEGLR+     CKWFT+ RHP+++L+SA++YC        CA       + D+  FAKH GN +  QF L  V   E+  + V+A            P W   K Y +        +  A  R            D+L P++++L +NY AVGILE +  ++ LF+ ALE+P   W     ++++  +  Q  I E + +     TDP++    ++Y+ LDL LYE+A +    Q   Y +
Sbjct:   37 CWVFTHNNKAGGTTVKTHLRNYAESRNETVA--LCHSDWYARGD----KGIQDLLNDKPV-LIAGGYAEGLRTSAFQGCKWFTMMRHPIARLISAFYYCSGGNRDQLCAANIHKPEDGDIYDFAKHWGNYALLQFALGVVDQHEIFAEEVDA------------PAWFKAKLYFEGRLGYPGNMSTATNRTTHDEWQSVWIPDILQPVEELLRSNYAAVGILEHWQRSMMLFDHALEIPGFNWT--VASASLSPRKSQNKIVEKKAMLAAAMTDPVL----RQYVWLDLLLYEYACSLHEEQLRRYDL 319          
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: A0A6H5JQY7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY7_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 1.860e-26
Identity = 85/305 (27.87%), Postives = 153/305 (50.16%), Query Frame = 2
Query:  209 CWVFLHLERNGGTTIKKILYRRWKIAYDF----YDNDQWQGGDVIAAKYAERLLVDRQLRVIAGEHAEGLR---SMVGDRCKWFTVFRHPVSQLVSAYFYCKQRPHKLGCAYEHSDKREEDLVMFAKHRGNLSFQQFMLNYVTFSELIDDAVEASSVEEFGGLQTGPGWNILKRYLK-RLPKAA------------------VRDMLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNSNIQMKNLQYHIQEHELLTDPLIYSKVKKYIELDLSLYEHAVTTFNHQKEVYGI 1045
            CWV+  + + GGT+I++++ + +  A +     + + Q+  GD        + ++DR+  +I G + EGLR   +++G  CKWFT+ RHP+++LVSA+ YC   P    CA       + D+  FA+H GN    QF L +   ++++   V++            P W   K Y + RL  +                   + ++L P++++L + Y AVGILEQ++ ++ LF+ AL++P   W     +S    +N+     +++LL   +    +K+ + LD+ LYEHA +    Q   YG+
Sbjct:   37 CWVYTDMNKAGGTSIRRMI-KDYAAATNTTVGEFTHTQYNAGD-----RGVQQILDRRPSLIWGAYTEGLRPYATVLG--CKWFTMVRHPIARLVSAFNYCGIVPSDQLCATRIHKPEDGDIYDFAEHWGNHGVVQFALAFEDLNDILVTEVKS------------PPWYKAKLYFEGRLGPSGKTSTSANISTKDVCQNVWMPEILQPVEELLRSKYAAVGILEQWETSMMLFDHALQLPGFNWTSTSASST--PRNVHDSKAKNDLLVASMTDPVLKQILWLDILLYEHACSVHKAQLSRYGL 319          
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: A0A6H5L061_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L061_9PHAE)

HSP 1 Score: 100 bits (250), Expect = 2.250e-20
Identity = 69/220 (31.36%), Postives = 109/220 (49.55%), Query Frame = 2
Query:  446 FRHPVSQLVSAYFYCKQRPHKLGCAYEHSDKREEDLVMFAKHRGNLSFQQFMLNYVTFSELIDDAVEASSVEEFGGLQTGP----GWNILKRYLKRL-----PKAAVRD-----------MLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNSNIQMKNLQYHIQEHELLTDPLIYSKVKKYIELDLSLYEHAVTTFNHQKEVYGI 1045
            ++ P+ +LVSAYFYCKQ      CA         DL  FAKH GN   +QF L +V        A +  + E+  G+   P    GW  +K Y +        +A +++           +L P++ +L  NY+AVGILE+++ ++ LFN+AL++P+  W+    N   +  + + H +E   L        + K + LD+ LY+HAV   N Q E +GI
Sbjct:   18 YKCPIPRLVSAYFYCKQNGWDELCASMVLKAGNTDLHTFAKHWGNYGLRQFSLAFV-------GAEDVFAAEQERGIDGRPVMFPGWYRVKEYFENQFDVEQERALMQETGASNDLAMSYLLQPVEDLLSRNYSAVGILEKWETSMTLFNKALKVPSFNWQTASRNLGRKNVDKRLHDEEAHALRAAWDDPVLAKTLWLDIFLYDHAVAVHNKQVEEHGI 230          
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: A0A6H5JT32_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT32_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 3.400e-13
Identity = 77/288 (26.74%), Postives = 129/288 (44.79%), Query Frame = 2
Query:  209 CWVFLHLERNGGTTIKKILYRRWKIAYDFYDNDQWQGGDVIAAKYAERLLVDRQLRVIAGEHAEGLR---SMVGDRCKWFTVFRHPVSQLVSAYFYC------KQRPHKLGCAYEHSDKREED-LVMFAKHRG-NLSFQQFMLNYV----TFSELIDDAVEASSVEEFGGLQTGPGWNILKRYLKRLPKAAVRDMLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNSNIQMKNLQYHIQEHELLTDPLIYSKVKKYIELDLSLYEHAVTTFNHQ 1027
            C +F H+ ++GG+TIK  L    K      D        V    Y +  L       +   +AE LR    ++G  C++FTV RHP+ +L+SA+FYC      + RP K  C Y +  +   D LV FAK+   N +F+Q           F E  +   +  +V E GG      W +L++                  + +   YTAVGILE +D +++LFN  +  P  +W+   H++  Q   L+  +     ++      ++ + +  D+ LY+++V+ F  Q
Sbjct:  128 CTLFNHMVKSGGSTIKDKLDIAAKA-----DGVDGPAMCVNGVGYEDSCLKAMHSAPVIVGYAELLRYPLEVIGRECEYFTVMRHPIDRLLSAFFYCPAYGDVQDRPPK-WCGYANDPQPVTDRLVEFAKYGWKNKAFRQMTFGLYCPPNAFCEQAEPGAQ-QAVHEPGG------WILLEQI-----------------EAILATYTAVGILEYWDLSMQLFNARVTSPVWDWEDMEHSNRGQRSGLRDEVHRWAHMSP-----EIHRVMATDMLLYDYSVSVFKLQ 380          
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Match: A0A6H5JT23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT23_9PHAE)

HSP 1 Score: 80.5 bits (197), Expect = 8.560e-13
Identity = 81/296 (27.36%), Postives = 129/296 (43.58%), Query Frame = 2
Query:  209 CWVFLHLERNGGTTIKKILYRRWKIAYDFYDNDQWQGG-------------DVIAAKYAERLLVDRQLRVIAGEHAEGLRSMVGDRCKWFTVFRHPVSQLVSAYFYC------KQRPHKLGCAYEHSDKREED-LVMFAK-HRGNLSFQQFMLNYVTFSELIDDAVEASSVEEFGGLQTGPGWNILKRYLKRLPKAAVRDMLPPMKKVLHNNYTAVGILEQFDETLELFNRALEMPNLEWKKWFHNSNIQMKNLQYHIQE--HELLTDPLIYSKVKKYIELDLSLYEHAVTTFNHQ 1027
            C VF H+ ++GG+TIK  L+   + A          GG               +   YAE +  D  L  +  +            C++FT+ RHPV +LVSA+FYC      + RP K  C Y        D L+ FA+ H  N++++Q          LI    EA+ VE   GL    G ++L++         V D+L        + YTAVGI+E +D +++LFN  +  P  +W     ++      L+  + +  H+    P+I+    + +  DL LY  A++ F  Q
Sbjct:   41 CTVFHHMVKSGGSTIKHNLHISSRAAGGPRPGSCVAGGGKRINSCKEAFNSSAVIMGYAELMRQDGPLEAVRRD------------CEYFTLLRHPVDRLVSAFFYCPTDHDLQLRPPK-WCGYADDPLPATDRLLEFAQQHWKNMAYKQMTFGMYCPHGLI---CEATEVETAPGLDEPHGLDVLQK---------VEDIL--------SGYTAVGIMEHWDLSMQLFNARVRSPVRDWNMTVRSNAGLPSELRDEVLQWAHD---SPVIH----RLMATDLLLYSFALSIFKRQ 296          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10867.554.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FWQ3_ECTSI3.430e-5337.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G715_ECTSI3.850e-5235.97Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G716_ECTSI6.020e-5035.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FS84_ECTSI2.420e-4132.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JY77_9PHAE3.680e-3832.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JNJ0_9PHAE6.150e-3231.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQY7_9PHAE1.860e-2627.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L061_9PHAE2.250e-2031.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT32_9PHAE3.400e-1326.74Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JT23_9PHAE8.560e-1327.36Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10867contigH-paniculata_contig10867:3638..5640 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score200.3
Seed ortholog evalue1.4e-48
Seed eggNOG ortholog2880.D7FWQ3
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Sulfotransferase family
EggNOG OGs2CYGC@1,2S47N@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size2003
Cds size999
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10867.554.1prot_H-paniculata_contig10867.554.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig10867 3687..4685 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928790.6324773-UTR-H-paniculata_contig10867:3637..36861622928790.6324773-UTR-H-paniculata_contig10867:3637..3686Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10867 3638..3686 +
1691480621.0313158-UTR-H-paniculata_contig10867:3637..36861691480621.0313158-UTR-H-paniculata_contig10867:3637..3686Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10867 3638..3686 +
1622928790.6737623-UTR-H-paniculata_contig10867:4685..56401622928790.6737623-UTR-H-paniculata_contig10867:4685..5640Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10867 4686..5640 +
1691480621.0538535-UTR-H-paniculata_contig10867:4685..56401691480621.0538535-UTR-H-paniculata_contig10867:4685..5640Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10867 4686..5640 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928790.6516073-CDS-H-paniculata_contig10867:3686..46851622928790.6516073-CDS-H-paniculata_contig10867:3686..4685Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10867 3687..4685 +
1691480621.042508-CDS-H-paniculata_contig10867:3686..46851691480621.042508-CDS-H-paniculata_contig10867:3686..4685Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10867 3687..4685 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig10867.554.1

>prot_H-paniculata_contig10867.554.1 ID=prot_H-paniculata_contig10867.554.1|Name=mRNA_H-paniculata_contig10867.554.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=333bp
MGVLSLPPRRRALFLLFGFVFLSSSMKQLVTPALASELHEDSQHALDAGV
RNKCWVFLHLERNGGTTIKKILYRRWKIAYDFYDNDQWQGGDVIAAKYAE
RLLVDRQLRVIAGEHAEGLRSMVGDRCKWFTVFRHPVSQLVSAYFYCKQR
PHKLGCAYEHSDKREEDLVMFAKHRGNLSFQQFMLNYVTFSELIDDAVEA
SSVEEFGGLQTGPGWNILKRYLKRLPKAAVRDMLPPMKKVLHNNYTAVGI
LEQFDETLELFNRALEMPNLEWKKWFHNSNIQMKNLQYHIQEHELLTDPL
IYSKVKKYIELDLSLYEHAVTTFNHQKEVYGI*
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mRNA from alignment at H-paniculata_contig10867:3638..5640+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10867.554.1 ID=mRNA_H-paniculata_contig10867.554.1|Name=mRNA_H-paniculata_contig10867.554.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2003bp|location=Sequence derived from alignment at H-paniculata_contig10867:3638..5640+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGTGTTGCATTGTCGCTTCAGTAGAATACAAGGCAGCCTGCTAGGAGGA TGGGCGTGCTCTCGCTGCCACCAAGACGACGAGCGCTCTTTCTGCTGTTC GGGTTTGTCTTCCTGAGTAGCAGCATGAAACAGCTCGTAACGCCAGCTCT TGCATCTGAACTTCATGAAGACAGCCAACACGCGCTGGACGCAGGGGTGC GCAACAAATGCTGGGTATTCCTGCACTTGGAAAGAAATGGCGGAACCACG ATCAAGAAGATACTGTATCGCAGGTGGAAGATTGCGTATGATTTCTACGA CAACGATCAGTGGCAAGGCGGCGATGTAATAGCCGCTAAATACGCGGAAC GCCTACTGGTGGACCGTCAACTACGTGTGATTGCTGGGGAACATGCGGAA GGGTTGAGGTCGATGGTGGGCGATCGATGCAAATGGTTCACGGTCTTTCG GCATCCAGTTTCACAGCTTGTCTCCGCTTATTTTTACTGCAAGCAACGCC CGCACAAACTGGGCTGTGCTTACGAACATTCGGATAAAAGAGAAGAGGAT CTCGTGATGTTTGCAAAGCACAGGGGTAATCTATCCTTCCAACAGTTCAT GCTGAACTACGTTACTTTCAGCGAACTAATCGACGATGCGGTGGAAGCGA GTTCCGTCGAAGAATTTGGTGGGTTGCAGACGGGTCCCGGATGGAACATT CTGAAGAGGTATCTGAAAAGATTACCCAAAGCAGCTGTGAGGGATATGCT TCCTCCGATGAAGAAAGTACTCCACAACAACTACACGGCCGTCGGCATCC TGGAGCAGTTTGATGAAACCCTCGAGTTGTTCAATCGCGCCCTGGAAATG CCGAACTTGGAGTGGAAAAAATGGTTTCACAATTCCAACATTCAGATGAA GAACTTGCAATACCATATCCAAGAACATGAACTTTTGACTGACCCGTTGA TCTACTCTAAAGTAAAAAAATACATCGAACTCGACCTTTCTCTGTACGAG CATGCTGTGACCACCTTCAATCACCAAAAGGAAGTGTATGGTATTTAAAT TCTCTCCAAGTTACCATAATTCTGGTCATCCCGTGGTGGTGCATAGGTTT GTGGAGATTCTCCGAACGTTGTAGTAGCTGCAGAGATTGGGAAGTGCAGA GAGGAAGGAGACAAGGTTGCGTTTCTTTTGGTTTCAACTTTTAGCCAGTG TTTAGATAGCGTGCAGTATAGTTCCATCAATATAAGCTGCGCGAAAAAGG ACAGGGGTACCGCGCCTTGACGTATTATTTCGCCGTATTTGGCCGGCATA ACCAGCTTTTCCCTAGCGTCGGTAGAATGAAACAGGCCCCCTTCGTGCAC ACACGACTGTTCCTGTCGCTTCAGTGCTGGGGCGTGGATGGTGTCTTCGA GAATGTGTTGTTTTAAGTGTTCCTACCATAAGTTGGAAAGGGGGTGTAGA ACGTGTACAGAGGATCTCTCGTCGCATCAAAGTCCGCTTATCTCGACGAT GGGGAAGGTTATCACCCTGCGCGAAGGCGCATTCAGTTCAAGTCACGAAA TTTTCGTGCACCAAAGCGAACGGGGCATAATATTTTTCATTTCGAACTCA TCAAGTTCGTTTTCAGTCGGAGATGAGGAAGATCTATTCCCGGGTTCCCC GTTCTATTCTCAAAATTTGGTTCCTAATCGAGTGCGTCACGGAATAGCGA TAGAGTTTCCGGCAACATGAAGCTGGGCGTGCACGAGCAGCTCTCCAGGA TGTTAGAAATGCCCGCTTCTACTCGATCTTATGGTGTTTTTGCTACTTAA AATCGGTCGTTGTAATTTCGCTGTAGATAGGAAGCTGTGGCGATGTGGCG ATGTGGCAAACAGAGGTGACGCGGTGCCTGTTAGTCTCACTTTAACTACC AATCCTCATACTTGAGAATCACTTTATAATCGAGGATCAGCGACAGCCGG TTTTAGTGCGGAAATTGTCTAATCAAATGATTTAATACGTCGTCGTACCT GTC
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Coding sequence (CDS) from alignment at H-paniculata_contig10867:3638..5640+

>mRNA_H-paniculata_contig10867.554.1 ID=mRNA_H-paniculata_contig10867.554.1|Name=mRNA_H-paniculata_contig10867.554.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1998bp|location=Sequence derived from alignment at H-paniculata_contig10867:3638..5640+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGCGTGCTCTCGCTGCCACCAAGACGACGAGCGCTCTTTCTGCTGTT
CGGGTTTGTCTTCCTGAGTAGCAGCATGAAACAGCTCGTAACGCCAGCTC
TTGCATCTGAACTTCATGAAGACAGCCAACACGCGCTGGACGCAGGGGTG
CGCAACAAATGCTGGGTATTCCTGCACTTGGAAAGAAATGGCGGAACCAC
GATCAAGAAGATACTGTATCGCAGGTGGAAGATTGCGTATGATTTCTACG
ACAACGATCAGTGGCAAGGCGGCGATGTAATAGCCGCTAAATACGCGGAA
CGCCTACTGGTGGACCGTCAACTACGTGTGATTGCTGGGGAACATGCGGA
AGGGTTGAGGTCGATGGTGGGCGATCGATGCAAATGGTTCACGGTCTTTC
GGCATCCAGTTTCACAGCTTGTCTCCGCTTATTTTTACTGCAAGCAACGC
CCGCACAAACTGGGCTGTGCTTACGAACATTCGGATAAAAGAGAAGAGGA
TCTCGTGATGTTTGCAAAGCACAGGGGTAATCTATCCTTCCAACAGTTCA
TGCTGAACTACGTTACTTTCAGCGAACTAATCGACGATGCGGTGGAAGCG
AGTTCCGTCGAAGAATTTGGTGGGTTGCAGACGGGTCCCGGATGGAACAT
TCTGAAGAGGTATCTGAAAAGATTACCCAAAGCAGCTGTGAGGGATATGC
TTCCTCCGATGAAGAAAGTACTCCACAACAACTACACGGCCGTCGGCATC
CTGGAGCAGTTTGATGAAACCCTCGAGTTGTTCAATCGCGCCCTGGAAAT
GCCGAACTTGGAGTGGAAAAAATGGTTTCACAATTCCAACATTCAGATGA
AGAACTTGCAATACCATATCCAAGAACATGAACTTTTGACTGACCCGTTG
ATCTACTCTAAAGTAAAAAAATACATCGAACTCGACCTTTCTCTGTACGA
GCATGCTGTGACCACCTTCAATCACCAAAAGGAAGTGTATGGTATTTAAA
TGGGCGTGCTCTCGCTGCCACCAAGACGACGAGCGCTCTTTCTGCTGTTC
GGGTTTGTCTTCCTGAGTAGCAGCATGAAACAGCTCGTAACGCCAGCTCT
TGCATCTGAACTTCATGAAGACAGCCAACACGCGCTGGACGCAGGGGTGC
GCAACAAATGCTGGGTATTCCTGCACTTGGAAAGAAATGGCGGAACCACG
ATCAAGAAGATACTGTATCGCAGGTGGAAGATTGCGTATGATTTCTACGA
CAACGATCAGTGGCAAGGCGGCGATGTAATAGCCGCTAAATACGCGGAAC
GCCTACTGGTGGACCGTCAACTACGTGTGATTGCTGGGGAACATGCGGAA
GGGTTGAGGTCGATGGTGGGCGATCGATGCAAATGGTTCACGGTCTTTCG
GCATCCAGTTTCACAGCTTGTCTCCGCTTATTTTTACTGCAAGCAACGCC
CGCACAAACTGGGCTGTGCTTACGAACATTCGGATAAAAGAGAAGAGGAT
CTCGTGATGTTTGCAAAGCACAGGGGTAATCTATCCTTCCAACAGTTCAT
GCTGAACTACGTTACTTTCAGCGAACTAATCGACGATGCGGTGGAAGCGA
GTTCCGTCGAAGAATTTGGTGGGTTGCAGACGGGTCCCGGATGGAACATT
CTGAAGAGGTATCTGAAAAGATTACCCAAAGCAGCTGTGAGGGATATGCT
TCCTCCGATGAAGAAAGTACTCCACAACAACTACACGGCCGTCGGCATCC
TGGAGCAGTTTGATGAAACCCTCGAGTTGTTCAATCGCGCCCTGGAAATG
CCGAACTTGGAGTGGAAAAAATGGTTTCACAATTCCAACATTCAGATGAA
GAACTTGCAATACCATATCCAAGAACATGAACTTTTGACTGACCCGTTGA
TCTACTCTAAAGTAAAAAAATACATCGAACTCGACCTTTCTCTGTACGAG
CATGCTGTGACCACCTTCAATCACCAAAAGGAAGTGTATGGTATTTAA
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