|
|
Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1124 |
| Cds size | 948 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1086.548.1 >prot_H-paniculata_contig1086.548.1 ID=prot_H-paniculata_contig1086.548.1|Name=mRNA_H-paniculata_contig1086.548.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=316bp
MAPSQQPLASLDCVHTQPSPPPPPPPPSAPQAQSAHEQVCEEGERVLEND
VIAMVVEDDDVGGGNDAKVDSRNGERRLEVDGTAADHGANMIVDEDDDDH
DGGGRVSSDCLVTVQQDEKPSVMVVIDGGDGGAGGTSTLDFQGEREEIPR
HRALGPALPAHMTSGALQLQTGRADEDAGDDATQKNQEEREQDQSRFLPH
VDEEAPIVVANDHDDTGTGGGDDDRRAFEEQLPQQQQQKAEGLPEGITTA
ADDLTAQQQQLRPQELLYRNNSRNTSTSSIIELSPPTAKNRLPSPTQAQR
SSFRMVAMPPPPPLP* back to topmRNA from alignment at H-paniculata_contig1086:27240..28376- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1086.548.1 ID=mRNA_H-paniculata_contig1086.548.1|Name=mRNA_H-paniculata_contig1086.548.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1137bp|location=Sequence derived from alignment at H-paniculata_contig1086:27240..28376- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGATATGGCGCCTTCGCAGCAGCCTCTAGCCTCGCTAGACTGTGTTCAT
ACCCAGCCATCACCCCCTCCCCCGCCGCCACCACCCTCGGCTCCGCAGGC
GCAGTCAGCGCACGAGCAGGTTTGCGAGGAGGGCGAACGTGTTCTTGAAA
ATGATGTGATCGCAATGGTAGTGGAAGATGATGATGTTGGCGGTGGTAAT
GACGCCAAGGTCGATTCAAGAAACGGAGAACGGAGGCTGGAGGTCGATGG
GACGGCGGCCGATCATGGTGCTAACATGATTGTGGATGAAGACGATGATG
ATCATGATGGCGGTGGTCGGGTCTCTTCGGATTGCTTGGTCACTGTTCAA
CAAGATGAAAAGCCGAGTGTAATGGTAGTAATAGATGGTGGCGATGGCGG
CGCCGGTGGCACATCAACCCTTGATTTTCAAGGAGAAAGAGAAGAAATCC
CGCGGCACCGTGCCCTCGGCCCAGCCCTCCCTGCTCATATGACCTCTGGA
GCACTCCAACTTCAGACGGGTAGAGCTGATGAGGATGCTGGTGATGACGC
AACACAGAAGAATCAGGAGGAGAGGGAGCAGGATCAATCGCGGTTTCTTC
CCCACGTTGATGAGGAGGCGCCCATTGTAGTCGCAAATGATCATGATGAC
ACTGGTACTGGCGGTGGTGACGATGACAGACGCGCTTTCGAAGAACAACT
TCCTCAGCAGCAGCAGCAGAAGGCGGAAGGGTTGCCTGAGGGCATAACGA
CAGCGGCAGACGACTTGACGGCACAACAACAACAACTACGGCCGCAAGAG
GTTGATGTACCAGCTGTTGTACCGCAACAACAGTCGAAACACCAGCACAA
GCAGTATCATCGAATTGTCCCCCCCTACGGCGAAGAATCGCTTGCCATCT
CCAACCCAGGCGCAACGGTCTTCGTTTCGGATGGTAGCAATGCCGCCGCC
GCCGCCATTGCCATAGCAGCGATAGAAGAAGCAGCATCAAAAGCAACAGC
ATTAGTGGCAGCAGCGAAACATGTCCACGATTTCAAGGGAAAACTCGCGG
AGATGTCCGACGCAGAAGCTTCAGGCCATGTTTCCCTTCCACCCCTGCCC
TGTAGCTCTCCGGACTCTGGAGAAAATAGGTGCTGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1086:27240..28376- >mRNA_H-paniculata_contig1086.548.1 ID=mRNA_H-paniculata_contig1086.548.1|Name=mRNA_H-paniculata_contig1086.548.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1896bp|location=Sequence derived from alignment at H-paniculata_contig1086:27240..28376- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGCCTTCGCAGCAGCCTCTAGCCTCGCTAGACTGTGTTCATACCCA
GCCATCACCCCCTCCCCCGCCGCCACCACCCTCGGCTCCGCAGGCGCAGT
CAGCGCACGAGCAGGTTTGCGAGGAGGGCGAACGTGTTCTTGAAAATGAT
GTGATCGCAATGGTAGTGGAAGATGATGATGTTGGCGGTGGTAATGACGC
CAAGGTCGATTCAAGAAACGGAGAACGGAGGCTGGAGGTCGATGGGACGG
CGGCCGATCATGGTGCTAACATGATTGTGGATGAAGACGATGATGATCAT
GATGGCGGTGGTCGGGTCTCTTCGGATTGCTTGGTCACTGTTCAACAAGA
TGAAAAGCCGAGTGTAATGGTAGTAATAGATGGTGGCGATGGCGGCGCCG
GTGGCACATCAACCCTTGATTTTCAAGGAGAAAGAGAAGAAATCCCGCGG
CACCGTGCCCTCGGCCCAGCCCTCCCTGCTCATATGACCTCTGGAGCACT
CCAACTTCAGACGGGTAGAGCTGATGAGGATGCTGGTGATGACGCAACAC
AGAAGAATCAGGAGGAGAGGGAGCAGGATCAATCGCGGTTTCTTCCCCAC
GTTGATGAGGAGGCGCCCATTGTAGTCGCAAATGATCATGATGACACTGG
TACTGGCGGTGGTGACGATGACAGACGCGCTTTCGAAGAACAACTTCCTC
AGCAGCAGCAGCAGAAGGCGGAAGGGTTGCCTGAGGGCATAACGACAGCG
GCAGACGACTTGACGGCACAACAACAACAACTACGGCCGCAAGAGATGGC
GCCTTCGCAGCAGCCTCTAGCCTCGCTAGACTGTGTTCATACCCAGCCAT
CACCCCCTCCCCCGCCGCCACCACCCTCGGCTCCGCAGGCGCAGTCAGCG
CACGAGCAGGTTTGCGAGGAGGGCGAACGTGTTCTTGAAAATGATGTGAT
CGCAATGGTAGTGGAAGATGATGATGTTGGCGGTGGTAATGACGCCAAGG
TCGATTCAAGAAACGGAGAACGGAGGCTGGAGGTCGATGGGACGGCGGCC
GATCATGGTGCTAACATGATTGTGGATGAAGACGATGATGATCATGATGG
CGGTGGTCGGGTCTCTTCGGATTGCTTGGTCACTGTTCAACAAGATGAAA
AGCCGAGTGTAATGGTAGTAATAGATGGTGGCGATGGCGGCGCCGGTGGC
ACATCAACCCTTGATTTTCAAGGAGAAAGAGAAGAAATCCCGCGGCACCG
TGCCCTCGGCCCAGCCCTCCCTGCTCATATGACCTCTGGAGCACTCCAAC
TTCAGACGGGTAGAGCTGATGAGGATGCTGGTGATGACGCAACACAGAAG
AATCAGGAGGAGAGGGAGCAGGATCAATCGCGGTTTCTTCCCCACGTTGA
TGAGGAGGCGCCCATTGTAGTCGCAAATGATCATGATGACACTGGTACTG
GCGGTGGTGACGATGACAGACGCGCTTTCGAAGAACAACTTCCTCAGCAG
CAGCAGCAGAAGGCGGAAGGGTTGCCTGAGGGCATAACGACAGCGGCAGA
CGACTTGACGGCACAACAACAACAACTACGGCCGCAAGAGCTGTTGTACC
GCAACAACAGTCGAAACACCAGCACAAGCAGTATCATCGAATTGTCCCCC
CCTACGGCGAAGAATCGCTTGCCATCTCCAACCCAGGCGCAACGGTCTTC
GTTTCGGATGGTAGCAATGCCGCCGCCGCCGCCATTGCCATAGCTGTTGT
ACCGCAACAACAGTCGAAACACCAGCACAAGCAGTATCATCGAATTGTCC
CCCCCTACGGCGAAGAATCGCTTGCCATCTCCAACCCAGGCGCAACGGTC
TTCGTTTCGGATGGTAGCAATGCCGCCGCCGCCGCCATTGCCATAG back to top
|