mRNA_H-paniculata_contig10821.530.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig10821.530.1
Unique NamemRNA_H-paniculata_contig10821.530.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig10821.530.1 vs. uniprot
Match: D8LE86_ECTSI (Similar to Transmembrane protein 15 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE86_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 1.420e-63
Identity = 119/198 (60.10%), Postives = 145/198 (73.23%), Query Frame = 1 
Query:    1 PEFLSLALGAAMGVLLTLEYLRCAGCPPLAKPLDRYFGTFLDARDGGCFVMTHLFLLLGCAIPVWVSRLLDH---------AYVLPYTGVVIVGIGDAMGAVVGSNLGQNRWPGSRRTLEGSAAVFLSSFFAFAALMGFVTATTVSTGDGQSGTAASGWGWWKACASMAWPVAVATLTEALTTQVDNIVLPCVLLSSL 567
            P+FLSLALG A+GVLL LE+LRC GCPPLA  +D Y+G FLDARDGGC V+THLFLL+GCA+PVW+S L+             + PY GVV++GIGDAMGA+VGS++G+  WPGSRRTLEGSA+VFLS+  +   L+ FV       G+  SG    G GW KA  S+AWPVAV +L EA TTQVDN+VLPCVLL+ L
Sbjct:  717 PDFLSLALGTALGVLLALEFLRCTGCPPLASAMDGYYGGFLDARDGGCVVVTHLFLLVGCAVPVWLSGLMGSHDGDGQGGILQLFPYAGVVVLGIGDAMGAMVGSSVGRLHWPGSRRTLEGSASVFLSTLGSLL-LLWFVLLGL--RGEEDSG----GEGWRKAARSLAWPVAVTSLMEAFTTQVDNLVLPCVLLACL 907
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BLAST of mRNA_H-paniculata_contig10821.530.1 vs. uniprot
Match: A0A6H5L8T3_9PHAE (Dolichol kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8T3_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 1.840e-60
Identity = 113/198 (57.07%), Postives = 142/198 (71.72%), Query Frame = 1 
Query:    1 PEFLSLALGAAMGVLLTLEYLRCAGCPPLAKPLDRYFGTFLDARDGGCFVMTHLFLLLGCAIPVWVSRLLDH---------AYVLPYTGVVIVGIGDAMGAVVGSNLGQNRWPGSRRTLEGSAAVFLSSFFAFAALMGFVTATTVSTGDGQSGTAASGWGWWKACASMAWPVAVATLTEALTTQVDNIVLPCVLLSSL 567
            P+FLSLALG A+GVLL LE+LRC GCPP+A  +D Y+  FLDARDGGC V+THLFLL+GCA+PVW+S L+             + PY+GVV++GIGDAMGA+VGS++G+  WPGSRRTLEGSA+VFLS+      L+ FV          + G  + G GW +A   +AWPVA+ +L EA TTQVDNIVLPCVLL+ L
Sbjct:  844 PDFLSLALGTALGVLLALEFLRCTGCPPVASVMDGYYEGFLDARDGGCVVVTHLFLLVGCAVPVWLSGLMGSHDGDGQGSVLQLFPYSGVVVLGIGDAMGAIVGSSVGRLHWPGSRRTLEGSASVFLSTLGTLL-LVWFVLLGL------RGGEESGGEGWRRAAEILAWPVALTSLMEAFTTQVDNIVLPCVLLACL 1034
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BLAST of mRNA_H-paniculata_contig10821.530.1 vs. uniprot
Match: A0A4D9CPJ6_9STRA (Dolichol kinase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CPJ6_9STRA)

HSP 1 Score: 137 bits (345), Expect = 5.020e-34
Identity = 87/186 (46.77%), Postives = 110/186 (59.14%), Query Frame = 1 
Query:    1 PEFLSLALGAAMGVLLTLEYLRCAGCPPL-AKPLDRYFGTFLDARDGGCFVMTHLFLLLGCAIPVWVSRLL--DHAYVLPYTGVVIVGIGDAMGAVVGSNLGQNRWPGSRRTLEGSAAVFLSSFFAFAALMGFVTATTVSTGDGQSGTAASG-WGWWKACASMAWPVAVATLTEALTTQVDNIVLP 546
            P FLSLA   A+ +LL LEYLR      L  +P+ RY+  FLD RD G  V+THL+LLL CA P+W+S LL  +    LP  G+++VG+GDA  A VG+  G++RWPG+RRTLEGSAA F++            T   V T  GQ G    G WGW  A       V + TL EA T Q+DN+VLP
Sbjct:  572 PLFLSLAHALALALLLLLEYLRLGRASLLLGRPVHRYYQHFLDDRDMGPLVVTHLYLLLACAFPLWLSFLLPPNRPPSLPLAGILVVGMGDAAAATVGTLCGKHRWPGTRRTLEGSAAFFIA------------TGLGVFTQLGQEGGKEGGVWGWGGA-------VVLLTLLEAFTAQIDNLVLP 738
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BLAST of mRNA_H-paniculata_contig10821.530.1 vs. uniprot
Match: W7TAW7_9STRA (Dolichol kinase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TAW7_9STRA)

HSP 1 Score: 133 bits (335), Expect = 4.640e-33
Identity = 86/186 (46.24%), Postives = 109/186 (58.60%), Query Frame = 1 
Query:    1 PEFLSLALGAAMGVLLTLEYLRCAGCPPL-AKPLDRYFGTFLDARDGGCFVMTHLFLLLGCAIPVWVSRLL--DHAYVLPYTGVVIVGIGDAMGAVVGSNLGQNRWPGSRRTLEGSAAVFLSSFFAFAALMGFVTATTVSTGDGQSGTAASG-WGWWKACASMAWPVAVATLTEALTTQVDNIVLP 546
            P FLSLA   A+ +LL LEYLR      L  +P+ RY+  FLD RD G  V+THL+LLL CA P+W+S LL  +    LP  G+++VG+GDA  A VG+  G++RWP +RRTLEGSAA F++            T   V T  GQ G    G WGW  A       V + TL EA T Q+DN+VLP
Sbjct:  369 PLFLSLAHALALSLLLLLEYLRLGRASLLLGRPVHRYYQHFLDDRDMGPLVVTHLYLLLACAFPLWLSFLLPPNRPPSLPLAGILVVGMGDAAAATVGTLCGKHRWPWTRRTLEGSAAFFIA------------TGLGVFTQLGQEGGKERGVWGWVGA-------VVLLTLLEAFTAQIDNLVLP 535
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BLAST of mRNA_H-paniculata_contig10821.530.1 vs. uniprot
Match: R1FSQ0_EMIHU (Dolichol kinase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FSQ0_EMIHU)

HSP 1 Score: 127 bits (320), Expect = 3.680e-31
Identity = 79/195 (40.51%), Postives = 107/195 (54.87%), Query Frame = 1 
Query:    1 PEFLSLALGAAMGVLLTLEYLRCAGCPPLAKPLDRYFGTFLDARDGGCFVMTHLFLLLGCAIPVWVSRLLDH-----------AYV--LPYTGVVIVGIGDAMGAVVGSNLGQNRWPGSRRTLEGSAAVFLSSFFAFAALMGFVTATTVSTGDGQSGTAASGWGWWKACASMAWPVAVATLTEALTTQVDNIVLP 546
            P  L+LAL A +     LE +R    PPLA+PL  +   F+D+RD G  V+TH++LL GCA+PVW+   L             A V   P  GV+++G+GDAM ++VG   G+ RWP SR+TLEGSAA   S+  A   L+       VS+ DG    A       +  A++A   AVA L EA T Q+DN+ LP
Sbjct:  294 PSLLALALAAVVPAFALLELVRVGALPPLARPLAAFLAAFIDSRDAGTLVLTHIYLLAGCALPVWLQSALPPPPPASRAPLAAAAVRGAPLAGVLVLGVGDAMASLVGVRFGRTRWPRSRKTLEGSAAAAGSTLLALLLLL------HVSSPDGAPADA-------RTWAALAGGTAVACLLEAATDQIDNLFLP 475
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BLAST of mRNA_H-paniculata_contig10821.530.1 vs. uniprot
Match: R1D3F0_EMIHU (Dolichol kinase n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D3F0_EMIHU)

HSP 1 Score: 128 bits (322), Expect = 5.270e-31
Identity = 80/195 (41.03%), Postives = 107/195 (54.87%), Query Frame = 1 
Query:    1 PEFLSLALGAAMGVLLTLEYLRCAGCPPLAKPLDRYFGTFLDARDGGCFVMTHLFLLLGCAIPVWVSRLLDH-----------AYV--LPYTGVVIVGIGDAMGAVVGSNLGQNRWPGSRRTLEGSAAVFLSSFFAFAALMGFVTATTVSTGDGQSGTAASGWGWWKACASMAWPVAVATLTEALTTQVDNIVLP 546
            P  L+LAL A +     LE +R    PPLA+PL  +   FLD+RD G  V+TH++LL GCA+PVW+   L             A V   P  GV+++G+GDAM ++VG   G+ RWP SR+TLEGSAA   S+  A   L+       VS+ DG    A       +  A++A   AVA L EA T Q+DN+ LP
Sbjct:  450 PSLLALALAAVVPAFALLELVRVGALPPLARPLAAFLAAFLDSRDAGTLVLTHIYLLAGCALPVWLQSALPPPPPASRAPLAAAAVRGAPLAGVLVLGVGDAMASLVGVRFGRTRWPRSRKTLEGSAAAAGSTLLALLLLL------HVSSPDGAPADA-------RTWAALAGGTAVACLLEAATDQIDNLFLP 631
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BLAST of mRNA_H-paniculata_contig10821.530.1 vs. uniprot
Match: L8HEK2_ACACA (Phosphatidate cytidylyltransferase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HEK2_ACACA)

HSP 1 Score: 119 bits (297), Expect = 8.480e-28
Identity = 68/185 (36.76%), Postives = 104/185 (56.22%), Query Frame = 1 
Query:    4 EFLSLALGAAMGVLLTLEYLRCAGCPPLAKPLDRYFGTFLDARDGGCFVMTHLFLLLGCAIPVWV----SRLLDHAYVLPYTGVVIVGIGDAMGAVVGSNLGQNRWPGSRRTLEGSAAVFLSSFFAFAALMGFVTATTVSTGDGQSGTAASGWGWWKACASMAWPVAVATLTEALTTQVDNIVLP 546
            +F+ L+ G A+  L+ +EYLR     PL + +D +  TF+D RD G  ++THL+LL+GCA PVW+    +   D  ++LPY GV++VG+GD+  ++ G  LG+ +WP +++T+EG+ A    +    A L+  +    VS   GQ          W      AW V    L EA TTQ+DN+ LP
Sbjct:  357 QFMKLSFGVALAGLIFVEYLRLGKIAPLGEKIDSFMRTFIDERDAGSLILTHLYLLVGCAAPVWLYTPANPSEDAHFLLPYLGVLLVGLGDSFASLAGMYLGRIKWPHTKKTVEGTMAAV--AVVLLAGLLLSLCYPFVSLSLGQ----------WL---GFAWAVLCGCLLEAFTTQIDNLALP 526
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BLAST of mRNA_H-paniculata_contig10821.530.1 vs. uniprot
Match: A0A1Y2GTG9_9FUNG (Dolichol kinase n=1 Tax=Lobosporangium transversale TaxID=64571 RepID=A0A1Y2GTG9_9FUNG)

HSP 1 Score: 115 bits (288), Expect = 2.500e-26
Identity = 69/217 (31.80%), Postives = 112/217 (51.61%), Query Frame = 1 
Query:    7 FLSLALGAAMGVLLTLEYLRCAGCPPLAKPLDRYFGTFLDARDGGCFVMTHLFLLLGCAIPVWVSRLLDHAYVLPYTGVVIVGIGDAMGAVVGSNLGQNRWPGSRRTLEGSAAVFLSSFFAFAALMGFVTATTVSTGDGQSGTAAS----------------------GWGWWKACASMAWPV----------AVATLTEALTTQVDNIVLPCVLLS 561
            F+ +A   A+  L+ LEY+RC    P  K +  +   FLDARDGG  +++HL+LL+GCA PVW++   +   +   +G+  +G+GDAM ++VG   G++RWPG+ +T+EG+ A   S   A  A+   +   +   GDG S  ++S                       +  W   +S+ W V          +VA + EA++ Q DN+V+P  +LS
Sbjct:  643 FMHIAFSVALAALIFLEYIRCFAVVPFGKEIHLFLVGFLDARDGGPIILSHLYLLMGCAAPVWLA---EQHILAGLSGIFALGVGDAMASIVGKRFGRHRWPGTIKTVEGTVAFVASMMVAAGAVFVGMWLMSFVFGDGTSPRSSSLVLVSNKAKQLSSSSMPPASLLSFSTWNDWSSVTWSVWGIVRYGMAVSVAAMLEAVSEQNDNLVIPVTMLS 856
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BLAST of mRNA_H-paniculata_contig10821.530.1 vs. uniprot
Match: A0A2N1P053_9GLOM (Uncharacterized protein n=8 Tax=Rhizophagus TaxID=1129544 RepID=A0A2N1P053_9GLOM)

HSP 1 Score: 115 bits (287), Expect = 2.960e-26
Identity = 70/193 (36.27%), Postives = 108/193 (55.96%), Query Frame = 1 
Query:    1 PEFLSLALGAAMGVLLTLEYLRCAGCPPLAKPLDRYFGTFLDARDGGCFVMTHLFLLLGCAIPVWVSRLLDHAYVLP-YTGVVIVGIGDAMGAVVGSNLGQNRWPGSRRTLEGSAAVFLSSFFAFAALMGFVTATTVSTGDGQSGTAASGWGWWKACASMAWPVAVATLTEALTTQVDNIVLPCVLLSSLPLQ 576
            PEF+ LA   A   L+ LEYLR     P+ K L  +   FLD+RD G  +++H++LL+GCA  +W    LD +++L   +G+  +G+GD+M +++G   G+NRWP S +T+EGS A     FF F  +  F+     S+ +   G++A    W+K     A  V    L EA + Q DN++LP  + S L +Q
Sbjct:  471 PEFMHLAFSVAFAALIYLEYLRYFAVYPIGKQLHMFLSEFLDSRDSGPCILSHIYLLIGCAGCIW----LDGSFILANLSGIFTLGLGDSMASIIGKRYGRNRWPKSCKTIEGSIA-----FFVFLFIGAFILVNISSSPNMWPGSSAQ---WFK----YALAVLTTALLEAASFQNDNLILPLFMWSFLNIQ 647
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BLAST of mRNA_H-paniculata_contig10821.530.1 vs. uniprot
Match: A0A058Z0A1_FONAL (Uncharacterized protein n=2 Tax=Fonticula alba TaxID=691883 RepID=A0A058Z0A1_FONAL)

HSP 1 Score: 115 bits (287), Expect = 3.440e-26
Identity = 71/203 (34.98%), Postives = 111/203 (54.68%), Query Frame = 1 
Query:    1 PEFLSLALGAAMGVLLTLEYLRCAGCPPLAKPLDRYFGTFLDARDGGCFVMTHLFLLLGCAIPVWVSR--LLDHAYVLPY----------TGVVIVGIGDAMGAVVGSNLGQNRWPGSRRTLEGSAAVFLSSFFAFAALMGFVTATTVSTGDGQSGTAASGWGWWKACASMAWPVAVATLTEALTTQVDNIVLPCVLLSSLPL 573
            P FL L+ G A+ +LL +E +R    P L   +D+ FG FLDARD G  V++HL+LL+GCA+PVW+S   LLD   +  +          +G++ +G+GD   +  G + G++RWPGSR+T+EG+    LS+          +T    +   G    ++S W  +         +A + L EALT Q DN+++P  L S++ L
Sbjct:  744 PSFLQLSFGIALALLLLVEIIRHFRFPVLGPAVDQAFGVFLDARDCGPVVLSHLYLLIGCALPVWLSPAVLLDSGALSDFASSRSVLAGLSGILALGVGDTAASAFGLSFGRHRWPGSRKTIEGTLGGLLSTL---------LTVALSAVAFGFVSFSSSHWSLYSTA------LAFSALLEALTFQNDNLIVPLYLFSAVSL 931
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10821.530.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE86_ECTSI1.420e-6360.10Similar to Transmembrane protein 15 n=1 Tax=Ectoca... [more]
A0A6H5L8T3_9PHAE1.840e-6057.07Dolichol kinase n=1 Tax=Ectocarpus sp. CCAP 1310/3... [more]
A0A4D9CPJ6_9STRA5.020e-3446.77Dolichol kinase n=1 Tax=Nannochloropsis salina CCM... [more]
W7TAW7_9STRA4.640e-3346.24Dolichol kinase n=1 Tax=Nannochloropsis gaditana T... [more]
R1FSQ0_EMIHU3.680e-3140.51Dolichol kinase n=1 Tax=Emiliania huxleyi TaxID=29... [more]
R1D3F0_EMIHU5.270e-3141.03Dolichol kinase n=1 Tax=Emiliania huxleyi TaxID=29... [more]
L8HEK2_ACACA8.480e-2836.76Phosphatidate cytidylyltransferase n=1 Tax=Acantha... [more]
A0A1Y2GTG9_9FUNG2.500e-2631.80Dolichol kinase n=1 Tax=Lobosporangium transversal... [more]
A0A2N1P053_9GLOM2.960e-2636.27Uncharacterized protein n=8 Tax=Rhizophagus TaxID=... [more]
A0A058Z0A1_FONAL3.440e-2634.98Uncharacterized protein n=2 Tax=Fonticula alba Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10821contigH-paniculata_contig10821:2271..7807 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score219.5
Seed ortholog evalue1.3e-54
Seed eggNOG ortholog2880.D8LE86
Preferred nameDOLK
KEGG rclassRC00002,RC00017
KEGG koko:K00902,ko:K05542,ko:K11236
KEGG ReactionR01018
KEGG Pathwayko00510,ko01100,ko04011,map00510,map01100,map04011
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0003674,GO:0003824,GO:0004168,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006489,GO:0006490,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009555,GO:0009856,GO:0009987,GO:0010483,GO:0012505,GO:0016020,GO:0016021,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019538,GO:0019637,GO:0022414,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0032501,GO:0032502,GO:0034645,GO:0036211,GO:0042175,GO:0043048,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046465,GO:0048229,GO:0048856,GO:0051703,GO:0051704,GO:0070085,GO:0071704,GO:0090407,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.dolichyl monophosphate biosynthetic process
EggNOG OGsCOG0170@1,KOG2468@2759
Ec32 ortholog descriptionDolichol kinase
Ec32 orthologEc-00_001300.1
EC1.3.1.88,2.7.1.108
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03016
Exons4
Model size588
Cds size588
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10821.530.1prot_H-paniculata_contig10821.530.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig10821 2271..7807 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928787.15924-CDS-H-paniculata_contig10821:2270..23331622928787.15924-CDS-H-paniculata_contig10821:2270..2333Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10821 2271..2333 -
1691480619.6536734-CDS-H-paniculata_contig10821:2270..23331691480619.6536734-CDS-H-paniculata_contig10821:2270..2333Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10821 2271..2333 -
1622928787.2702098-CDS-H-paniculata_contig10821:4351..46061622928787.2702098-CDS-H-paniculata_contig10821:4351..4606Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10821 4352..4606 -
1691480619.6672335-CDS-H-paniculata_contig10821:4351..46061691480619.6672335-CDS-H-paniculata_contig10821:4351..4606Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10821 4352..4606 -
1622928787.282961-CDS-H-paniculata_contig10821:6163..62301622928787.282961-CDS-H-paniculata_contig10821:6163..6230Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10821 6164..6230 -
1691480619.6770842-CDS-H-paniculata_contig10821:6163..62301691480619.6770842-CDS-H-paniculata_contig10821:6163..6230Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10821 6164..6230 -
1622928787.2955298-CDS-H-paniculata_contig10821:7604..78071622928787.2955298-CDS-H-paniculata_contig10821:7604..7807Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10821 7605..7807 -
1691480619.6865942-CDS-H-paniculata_contig10821:7604..78071691480619.6865942-CDS-H-paniculata_contig10821:7604..7807Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10821 7605..7807 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig10821.530.1

>prot_H-paniculata_contig10821.530.1 ID=prot_H-paniculata_contig10821.530.1|Name=mRNA_H-paniculata_contig10821.530.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=196bp
PEFLSLALGAAMGVLLTLEYLRCAGCPPLAKPLDRYFGTFLDARDGGCFV
MTHLFLLLGCAIPVWVSRLLDHAYVLPYTGVVIVGIGDAMGAVVGSNLGQ
NRWPGSRRTLEGSAAVFLSSFFAFAALMGFVTATTVSTGDGQSGTAASGW
GWWKACASMAWPVAVATLTEALTTQVDNIVLPCVLLSSLPLQRNH*
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mRNA from alignment at H-paniculata_contig10821:2271..7807-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10821.530.1 ID=mRNA_H-paniculata_contig10821.530.1|Name=mRNA_H-paniculata_contig10821.530.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5537bp|location=Sequence derived from alignment at H-paniculata_contig10821:2271..7807- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCGAGTTTTTGTCTCTGGCGCTAGGCGCCGCTATGGGAGTTCTGCTGAC
CCTAGAGTATTTGCGATGCGCGGGGTGTCCGCCCTTAGCCAAACCTCTGG
ATAGATACTTCGGGACCTTTTTGGACGCTCGGGACGGGGGCTGTTTTGTT
ATGACCCACCTGTTTTTGCTGCTGGGATGTGCCATTCCGGTGTGGGTGTC
CCGGTGAGATTTTTTTGTTGTTGATGTGGCTGTGTGAGGTGCGCTACTCA
CTGCCTGATTGGCTGATGTTCGTGTTTACAATATATATATACTCTTTTGT
TGCTTGTTTGGCAATGGTTGTCGTTGTGTGTGTGTGTTCCAATGTCTCGA
GTGAATGCGGTACGACATATTTTTGTGTAGTCATAATACAGTAGTAGGGG
TATCCATGGTGCGCCTCCAATCCATGCCCGTGCGTCTGTGTTTTTTGGAG
TGACTATAAATGTAGTTTGTTGAAAAATATATATATGAAGGATCGAAAAT
CACCTACGGAAGATACAACACATGTACAAAAGTTTTCACTTGTTGATACC
TGAGGAGAGATACTTGAAGCAGGGGTTGATCAAATGCGGGGTGACAAGAC
TAATGCAGAGAGCCTCTGCGATAAATTGAGACTGGAAACCCCCTCATGGA
TGTTTGCTGAAGTGGGTCAGGGGATTTATGGTAAACCTCCTGGAGTACGA
GGAACGTTCTCTGCTCGCCACGGGCACTTTGAGATGCGGTATTAGTTGTC
TGTTGCGGAACGACCAACGTAATGATTCACCTTCGAGTCTGTTGAAGATG
TTTGCTATTTTTTCTCTTCTACATGTGTGCGAAAATGACCAGCCAGCGTG
TATTTGTGCTCTTTTGCTTTTCCTTGTAATTGTAGAGCCAAATATTTCCT
GGTGTTTTGTCCTTTATTTTTTATGTTTTAGTTTTTAGTTTTTAGTTTTT
ATGTTTTAGTTTTTTGTTTTTAGTTTTTATGCTTTATTTTTCATTTTTTT
TGTCGTGGCTTCCGTGAGTAGCCCTGTTGGTAGTAGTGCTGCATACTTTG
GCATTTGTTGTCGTGAAGGCCTATCTATCGGCGCATGAGAGGGGCGAGAA
ATATATATATATATATATGTATATATCATTTTTTTCGGAATAACAAAATA
ATTTGACTTTTGAAGTCACGTGCTGGTGAACAGTCATTTAGCGTGTAGGA
CCATGCCAATTACTCCCCACCTGTGCTTTATCTACCGTCACTGCTGGACT
AGTTGTCTCGTCTGAACAGCGGCTGCTCCTTAAACCTCTGTTACAATGTC
ATAGCCCACAAGCGTGGTTATGTTTTTGTGTGTTTCACATGGGGTGGGAG
GAGTTTTTAGAGACTGGCGCGTAAGTAACTGCACGATTTTTTTCAGGAGG
CAATTCGAAGCGAGAGACGAGGCAATATATATATAATATCGTATACCGTC
AAAACAGCGAGTTCTCAGAATTTTTCGTGGCTGTTCAACTTATGGAGTTG
ATTCAATTTCAATCCACGCAAGCGTTCCTGCTTGCGCGACTTTTGCTGTG
TGTCGCCGCTCGTGTCGCCTGTGGCAGGCTACTTGATCATGCCTACGTGC
TGCCCTACACAGGCGTTGTCATCGTGGGGATTGGGGATGCCATGGTGAGC
AATCGCAGGACATGGCTGCCATGAGCATGGCGAGGCCTATATTTTTATTT
CAAGTGTGGCGTTTGTCACATGTCGCTACCCCCTCCTCCCCCACCCCTTA
ACTTTGAGAAAGCATATATTGAATTTATCGGGGCACGACGCATACTCGAA
CGACGAGTAGGAAACTGATTTGTATCGAAACTGAAAAGAGTTTCTTGAGG
CAATGTGTAGGTGATCATTGGGTACTCTCTGGCGTGCAGCCTCGTCGGGT
GAGGAGCGCTGGAACAGATCGGCAGACCAGAGTAGGTCAGATGCTCAAGA
ATTCCAGGAGCGCGCTCGCCGCACATGGAGATGGGAAATCTCACACGTAG
GATTTGGTTTTGCAGTCTTACGGTAACTTTCCTGTTTTTCTTGGCTATCG
GCCTGCTTCGACACCGATGATGGCTAATCAGCTCGCCGGTAGATGCGGAT
GCAAAGAAGCTGTGGATGATGTCTGCCTCAAACATGAGGGAGTTCGTCAG
CTGGCGTGCCAGTACACGCTTTTTGACTGACTACCTGTGTTGTTGTCTTA
ACTGAGCGTTCTCGTTCTTTCTTATTTTAAAGACTGGAGCTAGAGCCCCA
CGGAACTCTCTCGCGATCAAATATTCTTCAAGATTTTTCCAAAATTGACT
ATTTTTGTCTTGACGAATCGTAAACAAAGTAATATCATTTATATCAAATA
CAATATTTTTTGATAAAATTAAAAATATCAGCAGCTTCGTTAAGAGATTT
GGGTATCATATGATAACTATCTCTCCAAAAAATTCCATACTCTTTATATT
TGATGACACAAGCAAACAGACGCCGGCGTTCACGATATACATGAATATTT
CCTCTGCCAACAAGTAAAGTCGTTGGTGTTAATTAAGCAGATTATATCTC
CACATCTAAGGCTTTTGAGAGGCTACGGTATGAATCGTGGGAACCCTGAG
ATCTGATAGACTCACGCGCTATTCCGAAGTCCATTCCGATTTGACCATTT
TTTTTTTTTTTAATTTTCGATTGTCACGTTTTTTTTGTTTTTTTTTGGAA
AATATGAAAAAAAAAAAGAAGAGGGGGGGGCAAAATGTGGTTGGTACCTT
TTGTTGGCCAATATTTTGTTTTTCCCCGCGCGCGCTCCCGATTGATCTCG
CTAATTTCTCTGAGATTTTGGCGATCAACCCCCAAAACGTGTGAGATTAT
TACTATTGTTAAGGGGGGGGGGAATGGAGATGGTTATGTGCCTCTATAAA
CTCAACTGGCTTCACGTATGGCACAGAGGAAGTAATGTGTATTAATGTGG
AGCCCTAGACTGGAGTTTTACCCCGATGGCAACACGCAGTTTTGATGTGG
AGTTTCGAGCCCCACGAGTAGTGAACATGCCAGAGGTAGATCTTATGCCA
GTGACGCATGATGTAAACTGTTCCGAGAGTAACGTCACCATAACCGCCAT
CGTCAGTATCAAAACTATTCCCATAGTACACTAAATGATGACAATAACAC
AAGCACTGCCACATAGGAACCGCTCACTTCCTTCGGCCCCTCGTGTACCA
GGGTGCCGTGGTTGGCTCCAACCTCGGGCAAAACCGATGGCCCGGATCGC
GCCGCACTTTGGAAGGCTCGGCAGCGGTGTTCTTAAGCTCTTTCTTTGCC
TTTGCCGCCCTCATGGGGTTTGTGACGGCCACCACTGTGTCCACTGGGGA
CGGGCAAAGCGGAACTGCCGCGAGTGGCTGGGGCTGGTGGAAGGCTTGCG
CCAGCATGGCGTGGCCTGTGGCCGTTGCGACCTTGACGGAGGCTTTGACG
ACCCAGGTATTCACGAGTGTACGTAGGGAACAGGGGAGGGCCAGGGTAGG
GGGTGGTTTATCGTATCTGATGCACCCTTTGAGGAACTTTAGAGGGGGGG
AGAGGGCGTACTTTGCTCGTATTCCGTAATTGTTAAAGCATTGACCATTC
GTCCTCGGGAGGACGGAGCTTTGATCATGTCAGAAGCGATTTCCGATGGC
CAATCGCTATTTCCTACGTTGCCAAATTTGCCTCGATTTTGTTTTGTATA
GTACCCTATCTACCTCAAGCCTCGCGTCTTGGAGCCAATTTCCATATCCT
GGAACATACCCTATCTATCTCAACCCTCGTTTGTTCCGACCGATTTTATT
TTTTTTTAACCCCCGGAAGCCTGAGGCAAAAACTTTTACCGATGCCTCCA
TACTAAATTATTTTACCAAAGTATGTCTACATTTCCTTCAACAGAACATA
GTTATTTATTCCTCTGCGGGGTAGGCGCCACCCCGGTTCGGGTTCCGACC
GATTTCTATCTCCTAGAACGGCTATCGTCTTCTACTCGCAATATCAGGAT
TGAAATGCTTCTCTATCGCATCCTTGGATTTCCCTTAATCCATTTACACT
AGTATACATTTCTCTTTCCCACCATGTTTCATGTGTGAGGTATAGCATCA
AGGCATATTTCAGACCGAGGCAATCTAGCCCATAATCGTAACCATAGATG
GTGACCAGATACACTCTATATTCATGTGACCAATTTCATGATCGACCCTC
TGTCACACTGACTACTACAGTATAAAGGCAGTACAGTAAATGTAAGACCA
TTCAGAAAACCTCTGAAATAATCAGAATTTCAAGTTCGTTAACCTCCAAC
CATGGTCCAACCGTTTTTTTTTTTTGTTTTTTTTCGTTTTTGGGCTCACC
TAAAGATTCCTGTATCCATGTTGAGGATATGCAGCCCGACGGAGATACGT
GTCAGCTATGTAAAGTTCCAACAGAGACCTAATGGAGGGGGGGGGGGGGT
AGCGGTTTCAACCATGCTTCCCTGATTTGTATTATAATTATTCAGAAAGG
CGAGGATGCGCTGAATGCTCGCTGGAGTGAGAGCTTTGTTCAGTACCCTA
CGCGCTAAAAAGATCACTAGATATCTCACGCGGACGCTATGTGGTTGGCA
TCACAGCCACCTTAGTGAAACCCTTCACTGATGAATCGGGTGCAACGAAT
TTTCACGTTGGACCTTTCGAAACCGACGATGCTCGGGAAACACCCAAGAG
TTTTGCCGTTGGAAATATGTTCTCCAGATCTGGCGATGTACGTGGTCTTT
CGGCACGCGCAGGGTCGTTCTTGTCAAGAGGATCCAATTTGAAAATTTAT
CGCACCCGTTGTGCCAGCCAAGGGTTTATGGTGCATGAGTAGTAACTAGG
AGTAGGTGTTGCTATTATTACCGGGGAGCACCGCTTTTCAAACGCGATCA
TCTCGACAACTACGGCGCTACTGACAAGAGATATAATAGTATACCATTTG
GAAGAAGATCTTGCAGAGATTCATCTGTCGATTCAGGTCGTATTTCCACC
GTGAGATGTTTCCGTTTTCAAGATGAACATTTGCGTATGAAAAATGGCTC
GCATCCCGGTGAGATATTGATACCTATCTCCGGATTTCACGGTATATTCG
ATATTTCACCATGTATTTTTGGGTGGATGACTCTGTTATCCTTTACTGTG
GGTAGCTTTTTTTTTTTAACCCCCGGAAGGCCGAGGCAAAAACCTTTACC
GATGCTTTCATACTCAAGTATTTTACCAGAGTATGTCTACATTTCCTTTA
ACAGAACAGAGTTATTTATTCCTCTGCGGGGTAGGCGCCACCCCGGTTCG
GCCGAACGAAACTGTGGGTAGCTTGTCTCGTGTTTCTGCTCATGTGCCGC
TGGTTATCCATCTCCAAAGTTTGTAGTACTATTTACGTAATAACGTGGCC
ACCAGAAATAATTGTTGTATCCCTCTCTCGCACGCACACCACTGTCGTGA
TTTGCCGTCGTTTTGTTTTGACAGGTGGATAATATAGTGCTGCCGTGCGT
CTTGCTCAGCTCCTTACCTCTGCAAAGAAATCACTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig10821:2271..7807-

>mRNA_H-paniculata_contig10821.530.1 ID=mRNA_H-paniculata_contig10821.530.1|Name=mRNA_H-paniculata_contig10821.530.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1176bp|location=Sequence derived from alignment at H-paniculata_contig10821:2271..7807- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCCGAGTTTTTGTCTCTGGCGCTAGGCGCCGCTATGGGAGTTCTGCTGAC
CCTAGAGTATTTGCGATGCGCGGGGTGTCCGCCCTTAGCCAAACCTCTGG
ATAGATACTTCGGGACCTTTTTGGACGCTCGGGACGGGGGCTGTTTTGTT
ATGACCCACCTGTTTTTGCTGCTGGGATGTGCCATTCCGGTGTGGGTGTC
CCGCCCGAGTTTTTGTCTCTGGCGCTAGGCGCCGCTATGGGAGTTCTGCT
GACCCTAGAGTATTTGCGATGCGCGGGGTGTCCGCCCTTAGCCAAACCTC
TGGATAGATACTTCGGGACCTTTTTGGACGCTCGGGACGGGGGCTGTTTT
GTTATGACCCACCTGTTTTTGCTGCTGGGATGTGCCATTCCGGTGTGGGT
GTCCCGGCTACTTGATCATGCCTACGTGCTGCCCTACACAGGCGTTGTCA
TCGTGGGGATTGGGGATGCCATGGCTACTTGATCATGCCTACGTGCTGCC
CTACACAGGCGTTGTCATCGTGGGGATTGGGGATGCCATGGGTGCCGTGG
TTGGCTCCAACCTCGGGCAAAACCGATGGCCCGGATCGCGCCGCACTTTG
GAAGGCTCGGCAGCGGTGTTCTTAAGCTCTTTCTTTGCCTTTGCCGCCCT
CATGGGGTTTGTGACGGCCACCACTGTGTCCACTGGGGACGGGCAAAGCG
GAACTGCCGCGAGTGGCTGGGGCTGGTGGAAGGCTTGCGCCAGCATGGCG
TGGCCTGTGGCCGTTGCGACCTTGACGGAGGCTTTGACGACCCAGGGTGC
CGTGGTTGGCTCCAACCTCGGGCAAAACCGATGGCCCGGATCGCGCCGCA
CTTTGGAAGGCTCGGCAGCGGTGTTCTTAAGCTCTTTCTTTGCCTTTGCC
GCCCTCATGGGGTTTGTGACGGCCACCACTGTGTCCACTGGGGACGGGCA
AAGCGGAACTGCCGCGAGTGGCTGGGGCTGGTGGAAGGCTTGCGCCAGCA
TGGCGTGGCCTGTGGCCGTTGCGACCTTGACGGAGGCTTTGACGACCCAG
GTGGATAATATAGTGCTGCCGTGCGTCTTGCTCAGCTCCTTACCTCTGCA
AAGAAATCACTGAGTGGATAATATAGTGCTGCCGTGCGTCTTGCTCAGCT
CCTTACCTCTGCAAAGAAATCACTGA
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