mRNA_H-paniculata_contig10792.506.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10792.506.1 vs. uniprot
Match: B2KWI5_ECTSI (Transposase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=B2KWI5_ECTSI) HSP 1 Score: 184 bits (466), Expect = 6.280e-51 Identity = 98/202 (48.51%), Postives = 127/202 (62.87%), Query Frame = 1 Query: 4 VDAIRSGQMTYRQAATVFGVSNNNRERRVKGHVTIDAYVGQPTVLTQEEEDKIEDTLL*AVHRHLGVGRAELMEGVRMLCNDDRQVPWGREKDPGRKWLHVFFARHPRLSRRRSRIYEANRITANDQPRLRAFCSSWAETLANLRPAADYVWNTDETGEQSRDACEEDNYRE-GQNVVGTKCSNSRENITVVATVNTAGAVM 606 ++A+RSG M+ R AA +GV+ + RR+ G V+IDA VG TVLT EEE+ +ED LL A +G+ R L E VR LCND R +PW PGR WL FF RHP LS R +RIYEANRI ++D+ RL+ F + E + + AD++WNTDETG S+ E GQ VVG SNSRE +TVV T++ AGA + Sbjct: 15 IEAVRSGAMSLRAAAQAYGVNKRSLSRRLSGDVSIDAKVGPRTVLTVEEENFVEDALLYAARHFIGIDRTALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTSQGTKTMKAIAESGQKVVGAMRSNSRETVTVVVTISAAGATL 216
BLAST of mRNA_H-paniculata_contig10792.506.1 vs. uniprot
Match: A0A6H5L5E2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5E2_9PHAE) HSP 1 Score: 179 bits (453), Expect = 7.260e-51 Identity = 96/202 (47.52%), Postives = 125/202 (61.88%), Query Frame = 1 Query: 4 VDAIRSGQMTYRQAATVFGVSNNNRERRVKGHVTIDAYVGQPTVLTQEEEDKIEDTLL*AVHRHLGVGRAELMEGVRMLCNDDRQVPWGREKDPGRKWLHVFFARHPRLSRRRSRIYEANRITANDQPRLRAFCSSWAETLANLRPAADYVWNTDETGEQSRDACEEDNYRE-GQNVVGTKCSNSRENITVVATVNTAGAVM 606 ++A+RSG M+ R AA +GV+ + RR+ G ++DA VG TVLT EEE +ED LL A +G+ R L E VR LCND R +PW PGR WL FF RHP LS R +RIYEANRI ++D+ RL+ F + E + + AD++WNTDETG S+ E GQ V G SNSREN+TVV T++ AGA + Sbjct: 15 IEAVRSGAMSLRAAAQAYGVNKRSLSRRLTGDESMDAKVGPRTVLTVEEESFVEDALLYAARHFIGIDRTALQEHVRQLCNDGRDIPWDAAVGPGRSWLDGFFKRHPALSERSARIYEANRIMSDDETRLQTFYKDFGEFVDKEKIPADHLWNTDETGSTSQGTKTMKVITESGQKVGGAMRSNSRENVTVVVTISAAGATL 216
BLAST of mRNA_H-paniculata_contig10792.506.1 vs. uniprot
Match: A0A6H5KJ62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ62_9PHAE) HSP 1 Score: 174 bits (440), Expect = 7.580e-50 Identity = 96/197 (48.73%), Postives = 127/197 (64.47%), Query Frame = 1 Query: 10 AIRSGQMTYRQAATVFGVSNNNRERRVKGHVTIDAYVGQPTVLTQEEEDKIEDTLL*AVHRHLGVGRAELMEGVRMLCNDDRQVPWGREKDPGRKWLHVFFARHPRLSRRRSRIYEANRITANDQPRLRAFCSSWAETLANLRPAADYVWNTDETGEQSRDACEEDNYRE-GQNVVGTKCSNSRENITVVATVNTAG 597 AI +G M+ R+AA VFGV + E R +G V ++A VG T+L++EEED +ED LL A L V R L + VR LCND R++PW EK PG+ WL F RHPR++ R +RIYEANRIT +++PR+ F WA ++P A++V NTDETG + + E GQ VVG+ SNSRENITVVAT++ G Sbjct: 17 AIDNG-MSVRKAAEVFGVGRTSIEDRRRGKVAMNAKVGPETILSREEEDSLEDILLVAARNFLAVDRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLGGFLRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALHDEVKPKANHVHNTDETGTTPQGTKTTKAFAESGQKVVGSMRSNSRENITVVATISADG 212
BLAST of mRNA_H-paniculata_contig10792.506.1 vs. uniprot
Match: A0A6H5JFM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFM5_9PHAE) HSP 1 Score: 174 bits (440), Expect = 1.620e-48 Identity = 93/191 (48.69%), Postives = 123/191 (64.40%), Query Frame = 1 Query: 28 MTYRQAATVFGVSNNNRERRVKGHVTIDAYVGQPTVLTQEEEDKIEDTLL*AVHRHLGVGRAELMEGVRMLCNDDRQVPWGREKDPGRKWLHVFFARHPRLSRRRSRIYEANRITANDQPRLRAFCSSWAETLANLRPAADYVWNTDETGEQSRDACEEDNYRE-GQNVVGTKCSNSRENITVVATVNTAG 597 M+ R+AA VFGV + E R +G V ++A VG T+L++EEED +ED LL A L VGR L + VR LCND R++PW EK PG+ WL F RHPR++ R +RIYEANRIT +++PR+ F WA L +P A++V NTDETG + + E GQ VVG+ +NSREN TVVAT++ G Sbjct: 22 MSVRKAAGVFGVGRTSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHVHNTDETGTTPQGTKTTKAFAESGQKVVGSMRANSRENTTVVATISADG 212
BLAST of mRNA_H-paniculata_contig10792.506.1 vs. uniprot
Match: A0A6H5JYX7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYX7_9PHAE) HSP 1 Score: 171 bits (434), Expect = 1.560e-47 Identity = 92/201 (45.77%), Postives = 122/201 (60.70%), Query Frame = 1 Query: 7 DAIRSGQMTYRQAATVFGVSNNNRERRVKGHVTIDAYVGQPTVLTQEEEDKIEDTLL*AVHRHLGVGRAELMEGVRMLCNDDRQVPWGREKDPGRKWLHVFFARHPRLSRRRSRIYEANRITANDQPRLRAFCSSWAETLANLRPAADYVWNTDETGEQSRDACEEDNYRE-GQNVVGTKCSNSRENITVVATVNTAGAVM 606 +A+RSG M+ AA +G+S + RR+ G IDA VG TV+T EED +ED LL A + + A+L E VR LCND R +PW +K PGR WL F RH R+S R +RIYE+NR+T+ + RL F W + + +PAAD+VWNTDE+G + + E GQ VV S SREN T+V T+N AGAV+ Sbjct: 30 EAVRSGSMSGNAAAAAYGISKTSLSRRLSGECAIDARVGPGTVMTAAEEDALEDVLLYAGRNFIPLTTADLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHERISLRLARIYESNRVTSAEDERLHKFYDFWGQFIDEHQPAADHVWNTDESGGTVQGTQGQRVMAERGQPVVAQMRSTSRENCTIVTTINAAGAVL 230
BLAST of mRNA_H-paniculata_contig10792.506.1 vs. uniprot
Match: A0A6H5KKS3_9PHAE (HTH psq-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKS3_9PHAE) HSP 1 Score: 159 bits (403), Expect = 2.740e-45 Identity = 91/199 (45.73%), Postives = 125/199 (62.81%), Query Frame = 1 Query: 7 DAIRSGQMTYRQAATVFGVSNNNRERRVKGHVTIDAYVGQPTVLTQEEEDKIEDTLL*AVHRHLGVGRAELMEGVRMLCNDDRQVPWGREKDPGRKWLHVFFARHPRLSRRRSRIYEANRITANDQPRLRAFCSSWAETLANLRPAADYVWNTDETGEQSRDACEEDNY-REGQNVVGTKCSNSRENITVVATVNTAGA 600 +A+R G M+ R+AA V+ + + +RR+ G V +DA VG TV+++EEE+ IED LL A L V R L+E VR+LC D R+ PW EK PG+ WL F RHPR+ R +RIYEANR+T +PR+ F WA L +L+P AD+V NTDETG + Y + GQ VV + +NSREN T+V T++ G+ Sbjct: 30 EAVRGG-MSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGS 226
BLAST of mRNA_H-paniculata_contig10792.506.1 vs. uniprot
Match: A0A6H5JRY4_9PHAE (HTH psq-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRY4_9PHAE) HSP 1 Score: 156 bits (394), Expect = 7.500e-45 Identity = 77/151 (50.99%), Postives = 101/151 (66.89%), Query Frame = 1 Query: 28 MTYRQAATVFGVSNNNRERRVKGHVTIDAYVGQPTVLTQEEEDKIEDTLL*AVHRHLGVGRAELMEGVRMLCNDDRQVPWGREKDPGRKWLHVFFARHPRLSRRRSRIYEANRITANDQPRLRAFCSSWAETLANLRPAADYVWNTDETGE 480 M+ R+AA VFGV + E R +G V ++A VG T+L++EEED +ED LL A L VGR L + VR LCND R++PW EK PG+ WL F RHPR++ R +RIYEANRIT +++PR+ F WA L +P A++V NTDETGE Sbjct: 22 MSVRKAAGVFGVGRTSIEDRRRGKVAMNAKVGAETILSKEEEDSLEDILLFAARNFLAVGRVHLRDAVRRLCNDGRRIPWDPEKGPGKDWLAGFRRRHPRVAERSTRIYEANRITEDEEPRMVQFYERWAALLDEFKPEANHVHNTDETGE 172
BLAST of mRNA_H-paniculata_contig10792.506.1 vs. uniprot
Match: A0A6H5JV04_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV04_9PHAE) HSP 1 Score: 159 bits (403), Expect = 3.920e-42 Identity = 91/199 (45.73%), Postives = 125/199 (62.81%), Query Frame = 1 Query: 7 DAIRSGQMTYRQAATVFGVSNNNRERRVKGHVTIDAYVGQPTVLTQEEEDKIEDTLL*AVHRHLGVGRAELMEGVRMLCNDDRQVPWGREKDPGRKWLHVFFARHPRLSRRRSRIYEANRITANDQPRLRAFCSSWAETLANLRPAADYVWNTDETGEQSRDACEEDNY-REGQNVVGTKCSNSRENITVVATVNTAGA 600 +A+R G M+ R+AA V+ + + +RR+ G V +DA VG TV+++EEE+ IED LL A L V R L+E VR+LC D R+ PW EK PG+ WL F RHPR+ R +RIYEANR+T +PR+ F WA L +L+P AD+V NTDETG + Y + GQ VV + +NSREN T+V T++ G+ Sbjct: 16 EAVRGG-MSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGS 212
BLAST of mRNA_H-paniculata_contig10792.506.1 vs. uniprot
Match: A0A6H5JJ12_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ12_9PHAE) HSP 1 Score: 159 bits (403), Expect = 1.120e-41 Identity = 91/199 (45.73%), Postives = 125/199 (62.81%), Query Frame = 1 Query: 7 DAIRSGQMTYRQAATVFGVSNNNRERRVKGHVTIDAYVGQPTVLTQEEEDKIEDTLL*AVHRHLGVGRAELMEGVRMLCNDDRQVPWGREKDPGRKWLHVFFARHPRLSRRRSRIYEANRITANDQPRLRAFCSSWAETLANLRPAADYVWNTDETGEQSRDACEEDNY-REGQNVVGTKCSNSRENITVVATVNTAGA 600 +A+R G M+ R+AA V+ + + +RR+ G V +DA VG TV+++EEE+ IED LL A L V R L+E VR+LC D R+ PW EK PG+ WL F RHPR+ R +RIYEANR+T +PR+ F WA L +L+P AD+V NTDETG + Y + GQ VV + +NSREN T+V T++ G+ Sbjct: 257 EAVRGG-MSVRKAAKVYDIDRLSLKRRLDGEVAMDAKVGPGTVMSEEEENSIEDCLLYAGRNCLAVSRLHLLETVRLLCLD-RKTPWDPEKGPGKDWLAGFLERHPRVRERTTRIYEANRVTDESEPRIVEFYRKWAALLEDLKPEADHVHNTDETGTTPQGNKTMKAYCQAGQKVVESVRANSRENTTLVTTISADGS 453
BLAST of mRNA_H-paniculata_contig10792.506.1 vs. uniprot
Match: A0A6H5K6W6_9PHAE (HTH psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W6_9PHAE) HSP 1 Score: 156 bits (395), Expect = 1.460e-41 Identity = 78/161 (48.45%), Postives = 100/161 (62.11%), Query Frame = 1 Query: 7 DAIRSGQMTYRQAATVFGVSNNNRERRVKGHVTIDAYVGQPTVLTQEEEDKIEDTLL*AVHRHLGVGRAELMEGVRMLCNDDRQVPWGREKDPGRKWLHVFFARHPRLSRRRSRIYEANRITANDQPRLRAFCSSWAETLANLRPAADYVWNTDETGEQSR 489 DA+R G M+ AA +GVS + RR+ G +DA VG TV+T EED +ED LL A ++ + A+L E VR LCND R +PW +K PGR WL F RH R+S R +RIYE+NR+T RL F W + L +PAAD+VWNTDE+GEQ R Sbjct: 373 DAVRRGSMSRNAAAAAYGVSKMSLSRRLSGECAMDARVGPGTVMTAAEEDALEDVLLYAGRNYIPLTPADLTERVRQLCNDGRPIPWTPDKGPGRSWLEGFLGRHERISLRLARIYESNRVTCVGDERLHKFFDFWGQFLDEHQPAADHVWNTDESGEQHR 533 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10792.506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10792.506.1 >prot_H-paniculata_contig10792.506.1 ID=prot_H-paniculata_contig10792.506.1|Name=mRNA_H-paniculata_contig10792.506.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=130bp MEGVRMLCNDDRQVPWGREKDPGRKWLHVFFARHPRLSRRRSRIYEANRIback to top mRNA from alignment at H-paniculata_contig10792:4311..5334- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10792.506.1 ID=mRNA_H-paniculata_contig10792.506.1|Name=mRNA_H-paniculata_contig10792.506.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1024bp|location=Sequence derived from alignment at H-paniculata_contig10792:4311..5334- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10792:4311..5334- >mRNA_H-paniculata_contig10792.506.1 ID=mRNA_H-paniculata_contig10792.506.1|Name=mRNA_H-paniculata_contig10792.506.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=780bp|location=Sequence derived from alignment at H-paniculata_contig10792:4311..5334- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |