mRNA_H-paniculata_contig1079.503.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1079.503.1
Unique NamemRNA_H-paniculata_contig1079.503.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1079.503.1 vs. uniprot
Match: D7FNA8_ECTSI (Tryptophan-rich sensory-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNA8_ECTSI)

HSP 1 Score: 335 bits (860), Expect = 4.870e-109
Identity = 163/213 (76.53%), Postives = 188/213 (88.26%), Query Frame = 3
Query:  366 SRPAMDFAAIAKYIAGTGAEFSVIMGLLYLMQGHILPRLAARWGKTLVFLSFGFLAMKSRTFSVLNARRPEVSSEKQAKVDRRRPEWMPPPKVFPFIWITIGVLRAVSSTMVFEALGGKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVAHAAFRYYQALPKAGLVLLPSVVWIAVANLLVQSIWRLNGKESLYPAKKTS 1004
            SRP +D AA+AKYIAGT  EF++IMGLL LMQG +LPRL A+W +  VFL+FGFLAMKSRTFS+LNARRP ++ EK+ K++RRRP+WMPP K FP IWITIGVLRA+S+ MV+EALGG LV TPIAAMVLHLSVGDTWNHINNVEK+LGVAV  VFLVWLSVA+A +RYYQ LPKAGLVLLPS++WI+VANLLVQSIWRLNGKE LYP K+TS
Sbjct:   84 SRPPLDVAAVAKYIAGTAGEFTIIMGLLALMQGKLLPRLPAKWAQRTVFLTFGFLAMKSRTFSLLNARRPSLAKEKEEKIERRRPDWMPPIKAFPVIWITIGVLRALSTAMVWEALGGNLVATPIAAMVLHLSVGDTWNHINNVEKKLGVAVSGVFLVWLSVANAVYRYYQVLPKAGLVLLPSLLWISVANLLVQSIWRLNGKEPLYPPKQTS 296          
BLAST of mRNA_H-paniculata_contig1079.503.1 vs. uniprot
Match: A0A4D9CZE4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZE4_9STRA)

HSP 1 Score: 198 bits (504), Expect = 9.420e-57
Identity = 105/210 (50.00%), Postives = 138/210 (65.71%), Query Frame = 3
Query:  372 PAMDFAAIAKYIAGTGAEFSVIMGLLYLMQGHILP-RLAARWGKTLVFLSFGFLAMKSRTFSVLNARRPEVSSEKQAKVDRRRPEWMPPPKVFPFIWITIGVLRAVSSTMVFEALGGKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVAHAAFRYYQALPKAGLVLLPSVVWIAVANLLVQSIWRLNGKESLYPAKK 998
            P M + A+  +I  T  +F+ I+  +Y M+   L   L+ +    LV   F F++++SR FS+L+  RP V+ E + +  R+RP WMPP K FP IWI+IGVLR ++S++V+E     L++  + A VLHLSVGDTWN I NVE R G +VP VFLVWLSV +A   Y Q LP AG VL PS VWI +AN+LV SIWRLNG E LYP KK
Sbjct:   23 PPMQWGALGTWILATALQFATIVAFMYGMEKAFLRFNLSKQASIFLVRAFFAFMSLRSRVFSILDNSRPTVAMEDRKRRLRKRPSWMPPAKAFPVIWISIGVLRTIASSLVYETTN-TLLSPALLAFVLHLSVGDTWNTITNVEDRQGASVPGVFLVWLSVVNAVRMYAQTLPLAGKVLAPSAVWITIANVLVISIWRLNGAEPLYPFKK 231          
BLAST of mRNA_H-paniculata_contig1079.503.1 vs. uniprot
Match: A0A7S2Y3H3_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3H3_9STRA)

HSP 1 Score: 196 bits (498), Expect = 9.090e-55
Identity = 102/213 (47.89%), Postives = 139/213 (65.26%), Query Frame = 3
Query:  378 MDFAAIAKYIAGTGAEFSVIMGLL----YLMQGHILPRLAARWGKTLVFLSFGFLAMKSRTFS-VLNARRPEVSSEKQAKVDRRRPEWMPPPKVFPFIWITIGVLRAVSSTMVFEALGGKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVAHAAFRYYQALPKAGLVLLPSVVWIAVANLLVQSIWRLNGKESLYPAKKT 1001
            +D++AI  YI  T  +  +I   L    ++M+ +I  +LA    K +V   F F+++KSR FS  L+  RP + SEK  +  R+ P W PPP  FPFIW+TI  LRA SSTMV+EA    L+  P+ + +LHLS+GDTWN INNVE+R+G +V  V LVWLSV +A   Y+     AGLVLLPS +WI++A +L+ SIW LNGKE L+P KK+
Sbjct:  106 VDWSAIGLYIGATSVQIGLISLFLKVADFVMEQYISNKLAK---KGIVIAFFAFMSLKSRVFSPFLDNSRPSLKSEKSNRQKRKTPSWTPPPIAFPFIWLTIACLRATSSTMVWEAKNCTLLNAPVLSFMLHLSIGDTWNCINNVERRMGASVSAVILVWLSVINAVRMYWGVSKTAGLVLLPSAIWISIATVLITSIWNLNGKEPLFPVKKS 315          
BLAST of mRNA_H-paniculata_contig1079.503.1 vs. uniprot
Match: A0A7S0S4Y6_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0S4Y6_9CHLO)

HSP 1 Score: 186 bits (473), Expect = 1.610e-51
Identity = 101/222 (45.50%), Postives = 129/222 (58.11%), Query Frame = 3
Query:  378 MDFAAIAKYIAGTGAEFSVIMGLLYLMQ-------------GHILPRLAARWGKTLVFLSFGFLAMKSRTFSVLNARRPEVSSEKQAKVDRRRPEWMPPPKVFPFIWITIGVLRAVSSTMVFEALGGKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVAHAAFRYYQALPKAGLVLLPSVVWIAVANLLVQSIWRLNGKESLYPAKKTS 1004
            +D AA+ KY      +  ++ G L+ +Q             G +    AA+W  T  FL     ++KSR FS L+A RP +  EK+A  DR+RP WMPPP  FP +W TIG+LR +SS MV+EA G      P+    LHL+VGD WNHINNVE+R GVAVP V     S   A   YY     AGLVL PS VWI++A+LL+ SIW LNG++ LYP K  S
Sbjct:   60 LDVAALGKYAGAITLQTGIMSGALWGLQQASSALAASESLPGGVEGADAAKWLVTAFFL---VTSIKSRIFSPLDASRPTLKGEKKAMSDRKRPSWMPPPVTFPIVWSTIGLLRGISSVMVWEACGRDATALPLVVFCLHLAVGDCWNHINNVERRAGVAVPGVLCCLASCVAAVAAYYNTDTTAGLVLAPSAVWISIASLLIYSIWDLNGRDPLYPTKGES 278          
BLAST of mRNA_H-paniculata_contig1079.503.1 vs. uniprot
Match: A0A7S4LLX5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4LLX5_9EUGL)

HSP 1 Score: 188 bits (478), Expect = 3.830e-51
Identity = 98/214 (45.79%), Postives = 133/214 (62.15%), Query Frame = 3
Query:  378 MDFAAIAKYIAGTGAEFSVIMGLL--------YLMQGHILPRLAARWGKTLVFLSFGFLAMKSRTFSVLNARRPEVSSEKQAKVDRRRPEWMPPPKVFPFIWITIGVLRAVSSTMVFEALGGKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVAHAAFRYYQALPKAGLVLLPSVVWIAVANLLVQSIWRLNGKESLYPAK 995
             D  A+ +Y+  TG +++++M  L        YL+ G  LP L  +    LV L F F ++KSR FS L+  RP V+ E++   +++RP WMPPP VFP +W +I VLR +S  M++  LG  L+ TPI    L LS+GDT+N INNVEKR+G A   V  VW +     + YYQALP AGLVLLP  +W+++A  L+ SIWRLNG E LYP K
Sbjct:  169 FDGEAVLRYLGATGLQWTLLMATLWVLDQTNAYLVAGLGLPVLVPQ---VLVVLFFAFTSLKSRVFSPLDNSRPTVNKEQKEIDEKKRPSWMPPPLVFPIVWTSIAVLRTISGYMIWNGLGQTLLVTPIMVYFLGLSIGDTFNTINNVEKRMGTAFIAVLFVWSTFLAVNYIYYQALPTAGLVLLPQSIWLSIATCLIYSIWRLNGAEPLYPYK 379          
BLAST of mRNA_H-paniculata_contig1079.503.1 vs. uniprot
Match: L1JGW3_GUITC (Uncharacterized protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1JGW3_GUITC)

HSP 1 Score: 184 bits (466), Expect = 6.670e-51
Identity = 90/208 (43.27%), Postives = 136/208 (65.38%), Query Frame = 3
Query:  378 MDFAAIAKYIAGTGAEFSVIMGLLYLMQ--GHILPRLAARWGKTLVFLSFGFLAMKSRTFSVLNARRPEVSSEKQAKVDRRRPEWMPPPKVFPFIWITIGVLRAVSSTMVFEALGGKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVAHAAFRYYQALPKAGLVLLPSVVWIAVANLLVQSIWRLNGKESLYPAK 995
            +D+A +  +   T  E +++   ++ +Q  G  LP +     K L  L F  +A+KSR FS+L+A RP +   ++ K    RP W PPP VFP +W TIG+LR VSS +V+EA+G +++  P+ AM+ HLS+GDTWN+INNVE+R G AV  V  VW SV    + Y+Q +P AG++L PSV+W+++A++L+ +IW+LNG E + P K
Sbjct:   53 VDYAKVGTWFGATVVEVALLSAAMFAVQTIGGYLPPIGY---KCLAILFFASMALKSRIFSILDASRPTMGEVQETK----RPSWTPPPIVFPIVWSTIGILRTVSSVVVWEAVGRQMLVLPLIAMMTHLSIGDTWNNINNVERRKGSAVAGVAFVWTSVVTCTYLYWQTIPLAGMILAPSVLWLSIASVLIFNIWKLNGYEPILPYK 253          
BLAST of mRNA_H-paniculata_contig1079.503.1 vs. uniprot
Match: A0A7S0WK81_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0WK81_9CHLO)

HSP 1 Score: 185 bits (469), Expect = 8.400e-51
Identity = 97/209 (46.41%), Postives = 130/209 (62.20%), Query Frame = 3
Query:  378 MDFAAIAKYIAGTGAEFSVIMGLLYLMQGHILPRLAARW---GKTLVFLSFGFLAMKSRTFSVLNARRPEVSSEKQAKVDRRRPEWMPPPKVFPFIWITIGVLRAVSSTMVFEALGGKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVAHAAFRYYQALPKAGLVLLPSVVWIAVANLLVQSIWRLNGKESLYPAK 995
             DF A+ KYIA T  E   I   L+  Q   L  L A      K +V + F  LA +SR FS LNA RP++++E++AK +R+RP W PP  VFP +WI++G LR++S+ MVF A  G +V   I A+V HLS+GDTWN INNVEK+LG A   V  V  S  +   +YY  +P AG V+ P  VW+ +A+ LV +IW +NGK+ LYP K
Sbjct:   86 FDFGAVVKYIAATAFEVGAITTALFAAQKFCLGNLHATSLGAAKAIVAVMFFMLAFRSRVFSPLNASRPKIANERKAKQERKRPSWTPPAVVFPLVWISMGFLRSLSTMMVF-ATTGTVVHPAIIALVAHLSIGDTWNSINNVEKKLGAAAVGVLFVVSSAYNVVAQYYNVIPTAGYVIAPLAVWLTIASALVWNIWAINGKQPLYPTK 293          
BLAST of mRNA_H-paniculata_contig1079.503.1 vs. uniprot
Match: A0A7S1JAC1_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JAC1_9EUGL)

HSP 1 Score: 186 bits (472), Expect = 2.440e-50
Identity = 103/211 (48.82%), Postives = 129/211 (61.14%), Query Frame = 3
Query:  378 MDFAAIAKYIAGTGAEFSVIMGLLYLMQ--GHILPRLAARWG--KTLVFLSFGFLAMKSRTFSVLNARRPEVSSEKQAKVDRRRPEWMPPPKVFPFIWITIGVLRAVSSTMVFEALGGKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVAHAAFRYYQALPKAGLVLLPSVVWIAVANLLVQSIWRLNGKESLYPAKK 998
             D  A+ +YI  T  ++ +I+G L+++   G  L  L A     + LV L F F A+KSR FS L+  RP V+ EKQA  +R RP WMPPP VFP +W TI VLR V+  MV+ A G  L+  PI A  L LS+GDTWN INNVE+R+G A   V +VWLS       YY   P AGLVL    VW+ +A +LV SIWRLNG E +YP KK
Sbjct:  161 FDGEAVLRYIGATAMQWGLILGTLWVLDKVGPYLVGLGAPAAVPQLLVTLFFAFTALKSRVFSPLDNSRPTVAKEKQAIDERIRPSWMPPPLVFPIVWTTIAVLRTVAGVMVWLAAGKTLLVAPIMAHFLMLSIGDTWNTINNVERRMGTAAFGVCVVWLSALVTNIMYYNFYPTAGLVLAFQQVWLTIATVLVNSIWRLNGAEPMYPFKK 371          
BLAST of mRNA_H-paniculata_contig1079.503.1 vs. uniprot
Match: A0A6V2QN12_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2QN12_HETAK)

HSP 1 Score: 179 bits (454), Expect = 1.390e-48
Identity = 95/215 (44.19%), Postives = 134/215 (62.33%), Query Frame = 3
Query:  363 GSRPAMDFAAIAKYIAGTGAEFSVIMGLLYLMQGHILPRLAARWGKTLVFLS--FGFLAMKSRTFSVLNARRPEVSSEKQAKVDRRRPEWMPPPKVFPFIWITIGVLRAVSSTMVFEALGGKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVAHAAFRYYQALPKAGLVLLPSVVWIAVANLLVQSIWRLN--GKESLYPAK 995
            G +   D  A A YI  TGA+   I   +Y +   +L +++       V +S  F  +++KSR FS L+  RP   S+ Q   + +RP WMPPP  FP IW TIG+LR VSS +V++A+G  L+     A++LHLS+GDTWN INNV++RLG AVP V  VWLSV +    Y+ A P AG V+ PS +W++VA +LV ++WR+N  G+E L+P K
Sbjct:   73 GGKRVFDAKAFATYIGATGAQMGFISAFMYGLN-FLLSKVSGYPLLQTVVISVFFAIMSLKSRIFSPLDNSRPSPESQTQRNKEMKRPSWMPPPLAFPIIWSTIGILRTVSSVLVWKAMGRDLLNPATLALMLHLSIGDTWNTINNVDRRLGFAVPGVVCVWLSVLNLVRAYFAASPLAGYVIAPSALWLSVAMVLVTTLWRMNSNGQEPLWPYK 286          
BLAST of mRNA_H-paniculata_contig1079.503.1 vs. uniprot
Match: C1N832_MICPC (Tryptophan-rich sensory-like protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1N832_MICPC)

HSP 1 Score: 180 bits (456), Expect = 4.110e-48
Identity = 103/226 (45.58%), Postives = 136/226 (60.18%), Query Frame = 3
Query:  375 AMDFAAIAKYIAGTGAEFSVIMGL-LYLMQGHILPRLAARWGKTLVFLSFGFLAMKSRTFSVLNARRPEVSSEKQAKVD------------------------RRRPEWMPPPKVFPFIWITIGVLRAVSSTMVFEALGGKLVTTPIAAMVLHLSVGDTWNHINNVEKRLGVAVPVVFLVWLSVAHAAFRYYQALPKAGLVLLPSVVWIAVANLLVQSIWRLNGKE 977
            A+D+ A+ +Y A T A+ ++++   L+L  G     L  ++   +VF+ F F A+KSRTFS LNA RP+++ E+ AKV+                        R+RP WMPP   FP IW +I VLRA SS +VF ALGG L    I AM LHLSVGDTWN+INNVEKRLG AV  V  V LSV +  F+Y+    KAG ++ PS VWI +A +LV +IWR+N  E
Sbjct:  119 AIDWTALGRYFAATAAQCALLVWFTLWLNGGLNNSGLPMKYQNVIVFVWFAFNALKSRTFSPLNASRPKLADERAAKVEARRTGPHTTAFALCTPILKDFALRRKRPSWMPPGIAFPIIWTSIAVLRAASSVVVFNALGGTLNHPAIFAMFLHLSVGDTWNNINNVEKRLGTAVLGVGCVLLSVYNLVFQYFSVSAKAGYLIAPSAVWITIATVLVYTIWRINPGE 344          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1079.503.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNA8_ECTSI4.870e-10976.53Tryptophan-rich sensory-like protein n=2 Tax=Ectoc... [more]
A0A4D9CZE4_9STRA9.420e-5750.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2Y3H3_9STRA9.090e-5547.89Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A7S0S4Y6_9CHLO1.610e-5145.50Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
A0A7S4LLX5_9EUGL3.830e-5145.79Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
L1JGW3_GUITC6.670e-5143.27Uncharacterized protein n=2 Tax=Geminigeraceae Tax... [more]
A0A7S0WK81_9CHLO8.400e-5146.41Hypothetical protein n=1 Tax=Ostreococcus mediterr... [more]
A0A7S1JAC1_9EUGL2.440e-5048.82Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A6V2QN12_HETAK1.390e-4844.19Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
C1N832_MICPC4.110e-4845.58Tryptophan-rich sensory-like protein n=1 Tax=Micro... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1079contigH-paniculata_contig1079:4659..17677 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score339.3
Seed ortholog evalue1.9e-90
Seed eggNOG ortholog2880.D7FNA8
KEGG koko:K05770
KEGG TC9.A.24
KEGG Pathwayko04080,ko04214,ko04979,ko05166,map04080,map04214,map04979,map05166
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.TspO/MBR family
EggNOG OGs2S3PT@2759,COG3476@1
Ec32 ortholog descriptionTspO/MBR-related protein
Ec32 orthologEc-24_000050.1
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000
Exons7
Model size1571
Cds size948
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928782.75081-UTR-H-paniculata_contig1079:4658..52221622928782.75081-UTR-H-paniculata_contig1079:4658..5222Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1079 4659..5222 -
1691480617.8979716-UTR-H-paniculata_contig1079:4658..52221691480617.8979716-UTR-H-paniculata_contig1079:4658..5222Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1079 4659..5222 -
1622928782.9333737-UTR-H-paniculata_contig1079:17618..176771622928782.9333737-UTR-H-paniculata_contig1079:17618..17677Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1079 17619..17677 -
1691480617.9719968-UTR-H-paniculata_contig1079:17618..176771691480617.9719968-UTR-H-paniculata_contig1079:17618..17677Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1079 17619..17677 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928782.7699552-CDS-H-paniculata_contig1079:5222..52961622928782.7699552-CDS-H-paniculata_contig1079:5222..5296Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1079 5223..5296 -
1691480617.912961-CDS-H-paniculata_contig1079:5222..52961691480617.912961-CDS-H-paniculata_contig1079:5222..5296Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1079 5223..5296 -
1622928782.7853713-CDS-H-paniculata_contig1079:6714..68081622928782.7853713-CDS-H-paniculata_contig1079:6714..6808Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1079 6715..6808 -
1691480617.925069-CDS-H-paniculata_contig1079:6714..68081691480617.925069-CDS-H-paniculata_contig1079:6714..6808Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1079 6715..6808 -
1622928782.8320005-CDS-H-paniculata_contig1079:8547..86881622928782.8320005-CDS-H-paniculata_contig1079:8547..8688Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1079 8548..8688 -
1691480617.9322276-CDS-H-paniculata_contig1079:8547..86881691480617.9322276-CDS-H-paniculata_contig1079:8547..8688Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1079 8548..8688 -
1622928782.8502996-CDS-H-paniculata_contig1079:9015..91691622928782.8502996-CDS-H-paniculata_contig1079:9015..9169Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1079 9016..9169 -
1691480617.9392529-CDS-H-paniculata_contig1079:9015..91691691480617.9392529-CDS-H-paniculata_contig1079:9015..9169Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1079 9016..9169 -
1622928782.8669827-CDS-H-paniculata_contig1079:10358..104621622928782.8669827-CDS-H-paniculata_contig1079:10358..10462Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1079 10359..10462 -
1691480617.9469867-CDS-H-paniculata_contig1079:10358..104621691480617.9469867-CDS-H-paniculata_contig1079:10358..10462Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1079 10359..10462 -
1622928782.8814895-CDS-H-paniculata_contig1079:12068..121081622928782.8814895-CDS-H-paniculata_contig1079:12068..12108Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1079 12069..12108 -
1691480617.9549656-CDS-H-paniculata_contig1079:12068..121081691480617.9549656-CDS-H-paniculata_contig1079:12068..12108Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1079 12069..12108 -
1622928782.9106178-CDS-H-paniculata_contig1079:17277..176181622928782.9106178-CDS-H-paniculata_contig1079:17277..17618Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1079 17278..17618 -
1691480617.963322-CDS-H-paniculata_contig1079:17277..176181691480617.963322-CDS-H-paniculata_contig1079:17277..17618Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1079 17278..17618 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1079.503.1prot_H-paniculata_contig1079.503.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1079 5223..17618 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1079.503.1

>prot_H-paniculata_contig1079.503.1 ID=prot_H-paniculata_contig1079.503.1|Name=mRNA_H-paniculata_contig1079.503.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=316bp
MNMPTRISAAVLVAAAATCTLTTIGCTAFVVAPSNSVRLHQRVHHNNPDF
IPHKPALDAARLVKCGIGGQLLRNEARSGAGAAMLRASDALSSDGGGGDS
GGSRPAMDFAAIAKYIAGTGAEFSVIMGLLYLMQGHILPRLAARWGKTLV
FLSFGFLAMKSRTFSVLNARRPEVSSEKQAKVDRRRPEWMPPPKVFPFIW
ITIGVLRAVSSTMVFEALGGKLVTTPIAAMVLHLSVGDTWNHINNVEKRL
GVAVPVVFLVWLSVAHAAFRYYQALPKAGLVLLPSVVWIAVANLLVQSIW
RLNGKESLYPAKKTS*
back to top

mRNA from alignment at H-paniculata_contig1079:4659..17677-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1079.503.1 ID=mRNA_H-paniculata_contig1079.503.1|Name=mRNA_H-paniculata_contig1079.503.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13019bp|location=Sequence derived from alignment at H-paniculata_contig1079:4659..17677- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CATTCATGTGCAAACTAGACTAGCCTTTTGAGTAATTACCATCCTGAGAC AGCAGCGAAATGAACATGCCCACTAGGATATCAGCCGCTGTCCTAGTAGC GGCAGCGGCAACTTGCACGCTGACCACTATCGGATGCACCGCCTTCGTCG TCGCGCCGTCAAACAGCGTGCGGCTGCATCAGCGTGTTCATCATAATAAC CCTGATTTCATTCCGCACAAACCTGCTTTGGATGCTGCTAGGCTGGTGAA GTGTGGCATCGGGGGGCAGCTATTGAGGAATGAGGCTAGGAGTGGTGCGG GGGCAGCAATGCTCCGCGCATCGGACGCCCTTTCTTCAGATGGAGGAGGT GGAGACAGTGGCGGCTCCCGTCCAGCTATGGATTTCGCGGCGATCGCGAA GTGAGCTTACGACTATGTAGCAGTATAATAGTACGTACATCCCGTTGTTG TGATTCTCTATTCGTCAAGAGGTGCTCATGTTTTACTGCCGAGAGGGAGA GCCCGAGCGGTATCATGTAGTTTTGTGCCTATAAAGCTCCAGGGCGTGTA TGATTAAAAGTGGAGGTGTAATGCCTCTTGCTGCTCTGATTGGTCTCATC ACTGACTAAGACAACAACACAACAGTAGACTATGAGTAATTCGAGAAATG CCCCAGGAGGCATTCATTTTTTGGAACTTGACAATGATGTATGTACACAT GATTCGCATGATGGACTAACAGCACATCCGACCTGTGCCGCTCGTTTCAT GGCCGGTACTTGCCTTGTGTGTTTCCTGTGTGTGCAAGACATCTCTGTGT GTGCAAGTCTTTGCAGCAGCAGTGACGTCAGATTAGAAGACTGTAGCTGT TTAATACAAACAACCATCCATTTTAACACACACAAATATATATATATAGT AGCAGAGCCACTACTGCGCCTGTGCAGTTGGCGCGTTGTTCTCGACTCAA AAAAATTATAGTGTTGGGTTCGGTTGGGTTGGATTGGATTGGGTTGGGGT TGGTGTTTGGTCGGGTTAGGTCGGGGTAGGTTGGGTTGGGGTTGTTTTTA GGTTGGGGTTGCGTGACGAAGCCGGAGTGGGTGGGTGGGTAACCAATAGA ACTCTAGTGCTATTGTAGTGTAGGGTCGGGATTGGGTTGGGGTTGGGTGT TCAAGCCGGGGTAGGTGAGTCGGTGGGCGGGTAAATATCCTTTCCAATAG ACCTAAAATGATTATGTTGTGCAGGGTTGCGTTGCGTTGCGTTGCGTTGT GTTGGGATGGGTAGCGAAGTTTGGGCACGTCTGCAGCGTCGGGTAACTGT GCCCAAGGTAGGACTGTGGGCTGCGCTGCTCGTGGTGCTGGCATACACCT GTTCTGCTCGCAGTGCTAGCGAAGATACAAAACGATAAGTGCTTGCTGGT GTATGACACATGCGTAACTGAACTTTGGGTTGTTCTGGGTCATGCCTTAT CCTCGCCTAGGAGGTTTGCCACTCTGGTGAACATTTCTCACAAGCGCAAA GGGTTCCTGGAACACCTGACTCCATGGTTCCTTTGCAACGAACAGTGCAA CCGTCGCGCATTGTACGACATAATGACTACACACCATGCCCGAGGTTTCA CTGCATGTTTCTTTTGTAACGAACACACACCCTGTCCATTTCGCATGACA CGATGCGCTACGCACGATGTGCGAGGTAGCACTGACTGTGTTATGTAAAA TCCGACGCAGTTCTGACTGTACGTTTTCTTCCTAGCGCACACTGTACCAG TTCGTGATGCGCGGCACCATGACTGCGCGCTGTGTCCGACGTAGCCCTGT CTGTATTGCGTTTCAAATCGGCCAGTGCACATTGCACCCGTCGATACTTC ATCCGTTGACTGCGAGGCCGGCTAGTGCAACAGGTGCTATGTCTTTTTGT ATTGCCTATGTAAAGTTCGGGCATGTACGCCATACCCAACTGTTGTGAGG TCCAAGTGTCCGTCGTACGACTAGGTATTGTCGCATCTCTGTTTACTAAT TTATTGCATGTAAGATACAAATATAGACACTCAACAAAATCAGTAGAGTT TAGCCCGGTTGGTGGTCAAAACAATTAATTTTCTGCCTACTTGGCCTTAG CGTTATGTACTTCTCGAACCTGCGCGAACCCTCCAATCTGGCTCCAGGAC AATTGGATTCCACGGTTGCCACACCGCGAAGCGGCACGACGTTTGGCTGA TTTTAGACACCATAGGACCCAGATTTGACACACGAAGGGCTAGTGTAAGG GGGGTAGGGTTGCGGTTTTGGTTACAGTTAGATGCCGGCATCTTGACCCG GCACGCGAATATCAACCATGGCGAAAAACGTTTTTTCGATCAACTGGGTT AACCTAGACTCTGACAGAGCGAGCACGCACCAAGCAACCAGTGTTGCTCC ACACCTGAAGAAAATCATAGCCGAAGGTCATGTCAAAAGGGCAATCTTTT GATGGTATGTTCATCGTGCTCGGGGATGAATTCAGAGACGGCAGGAAATC CGCACGACGCTTGTACACGTAGGGTTTTCACCCACCGGCGGCCGCCCATC ACAGCCCTCGACAAGATGATATCAAGAGCTACGGCAGCAGTACCATGTAA CGTCCTCTTGCAGGTCTACCGACTAGGCTACTACTCTCAGGGGCAACGAG AATACCTACGGCTGCCCGGCACTGTACTCTGGATTGGTTTTGCGATTAGT ACTTCCTATCTTCCGTTGTCTTCTCGAGCGTTCGTCCTCGCAACACCTGT ACAATACCCTCTACTCCCTCCGTACCTGGGGTTACGTTTCGGATGAGAGA ATAAGTGGCTGGTGGCAGAGACTGAGCATGTGTGAATATGTCTGTACCAT TTTCAATAGAACTAGACATCGAGTGATTTCGCGGTGTTGGGTAGTCTTGC GTTCGGGTTAGTGGCGGAGCCTGAGTAAGAATGTACCCTTCACAATAGAA TTCGAGTGATTTTGTAGAGTTGGGTAGTGTTGATTTGGTTCGGGTTCGGG TTCGGGTTCGGATTCGGGTTCTGGTTTGGGTTGACACGGGGGTTCGTGGC GAAGTTTGGGTGGGTTCGTGGGTGAATTTTATCTCCACACCTAACGTTAA CAGGAAGCAAGTACACAGATTAGTAATAAAGCATTTCACTTCCTGCGACG AGTTTTTCTCATTCTAGTCGAAATACTTATCGCCGAGGAGTGTGCCAACA AAATGGTAGCAGCGTTTGCGAAATTCACTGTGACAAGTCGATTGAATTTA TTCAGGTGGAAGTGGTTCATCATTTACGCCAAATCCTAGGCTCCCGGCGG CGGGAGGGGGGGGTGGTATCCACCGTCACCTACTCTGCATGTGGACCAGG CTTTGCGCAGTAATGGTCGGGGAGGGGGACCGGGCCCTGCTGGCGGTCGG TGGATTTGGAGAAGGTCAACATGGAAACGAAAAATATGCTTACTACTCAT AGAGGAGATAATAAGAGTTTTAGTAGGGAGTTTTTGCGGGGGGGTTTCTG CCTTCAGGCAGAACTAAAGACAAACGGGCATTTTTTTGTTTTTTAATGAC TGTATGCAGCACAGTGTGAAGCCGCGACTTGTGGCAGGTGGTGCTACTGT AGCATTTGGCCCTTGCTCTTCTTTTTTGATCACATTAGATTATCACTTTG TCTAATCCCGTGGGTCATAGAGTAGACCACGCCACAGACATTGCAATGAC GTACAAAAAAAACAAGCAGCACCGAGTGTAACGCAACAAAAAGTGCAATT GGATTATGCGAAAACAGCACTATTCCCGATAGATTTAGGTCCGCCTTGTT ATCGGCCAAACACTCTTTCGGTTCTCCCGGGCGATTTCCAGCCAATCTTT CTGCTGAATGGCACTCATCGGGCAGTCTCACGATAATGGAAGCTGTAGAG ACCGCGTTGAGTAGAGCATTGCGCGTCTGGTACGCGTCCGTAGACCTCCC AGAGCGTACCCTGACGCTTTTCCGAGCGTCAACGGGGTATGTGCACGGTT AACGTTGTTTTCCAAAAAAATCGACACGGGCACGCGTAGAATTTTCTTCC AACATTCTTTCTGGAACATGAATTAATTCAACATCTTTTTTTGTCACGGC ACACAAAATAGAAGGAAAAACTAAATAGGGCAAATAATATGTACCGCTTT TTAAATATTACATGTGATGGCCAACTGCAGCCATCTCCGACACTGAAGTC TTCGTCTGCACAAGAATTGCCAGTCTTCCTGGTGTCATCATCCAACCCTG TCCAGATTACCGCTATGCTCCTCATCTCGGTGGGTCGCCCCCACCTCATT CAGTTTTGGTCCTGACCTGTTCGCCACAGGTAAAAAACCCACAAGTACGG AACGGTTCCCGCGTTCCGCGAACCCAAAAAGATAAGTCTTCGCCCGTTCT CTCGCTTTTGCGAGTATGAGTTGGAGACTTTCACGCCCGCTCTCCGTAGA TGCAATACATGCCTGCTGACAAAAAAAAATTATCGCCCAATTAAGGAAAT TGAGCCCATATACTTGATATTTCCTGACAATAAATCATTACCCACAAAGA AAATCTGGCCTAACAGGAAACAGGACTCTCTAATGGTGGGGCCATACTAA TTAATTCCTATACCAAAAGTAAGAAGCAGCATGAATCTCGCCAAAATAAA GTTTCGAGTGTCACCCGAAACAGCACGAGCTTTTTCAATCTTAGACCCAC ACATCATTAGTATTGATGTTGCGTGTATACATATATATTTATGTATATAT TGGTATCTATGCGACTGAGCGCTGGCGCGCGAAATCTTAAGAGTAGAACT GGGTCTGGAAGTATTGCTGATACTGGCTGAAAAAGCTTGGGGAATTTTGG GAGCTACCAGTATGTTATCGCCTTTGGGACGAGGTAGTGTCCAAAGCATG GTTGACGATTTACGTACACTGGATTAGTGTTGAGAGGTCAGCACCTTTTC GAGCGTTCCCAACGAAGGCGTGCCCAAAAGCAGATCTGGGTGCGCCCGGA AACAGATAGATCTACGATGGGTTGCGTCCCGACGTCTGATATTTTCAGTG TTCCATGATGTGAAAAAACGAATATCCCTAAAACAGATTTTGGAATATAG ATATCATAGAACTGCGTCCAGAAACGGTCAAAATGATGCCTCGTTACGGC TCAAAAGCCCATGTGAAGCAAAAGAAAGCGAATAATTTAGTAATGAACGA GACATGATTCGTACCTATAATTCCCCCTCAAGTTTTTGTGGTTGCCACCT CTTTCAGGTCCTCTTCCAGGTGCATGAGAGCGAGAGGATTAAAATATGGT CCCAAGCTTGGCTTGCTGCGCCCAAGCTTCAACTGTTTTGTGTTACATGA GCGCTGGGTGTCTAAACAAATCGCATATTTGACCGTCCTTCTAACCGGGT GGATCATGACTGTTGCGAGTCCTCCATTTCGCATGAGGGTATTGGTGCCC GGATTCTACTGTACGAAGTCGTTACTTTCGTTCGGCACGTTGCCTCGAAT TTAATCATCTTGTCCCTGTGCTTGACTGCCTTGGTGGTCGACGCTCCGAA ACCCACAACCGCTCGGCAGGTACATCGCGGGAACGGGAGCGGAATTCAGC GTCATAATGGTGAGTCGGTCCAGTTTGGCCTGCGTTTGTGACATTATGAA TACGTTATGATTTATTATTTTTTGTTTTTCACCAGACTAATTAAAATGCT GTTTGGTTCAAGTGAAATCACGACGTTGTGATATAGACATTGGAGGATCA AGCAATCGTAGGATATATGGCATTTCACATTGAGAGTCGAGTAGTATGGT TTGCTCACATTGGTATTTTACGTAGAGGTTCGTTGATGACAGAGCAGGCC GCTGGCATGTGCCAGTCCAACTTGTTGTTGACCCATCTTTTATCTCGGGA TCGCGTCCTATTGTGTTCTTTGTGTTCCTTGCCTCAACGGGTGGGTGCCA TGCAGTGGCCCTATCCGTGCTCCCGGAACCCTTCCTTGGGCCTTTTTTTT TTTTTTTTTTCAACATTCGGCTGCTGTAGATGTAGCACAACATTCCCTCT ACAGATTATTCTCGCCGGAATCTGTGAGGCCGGGAAAGCAAAGAACCGCA TGAACCTGTACAAAGGTTGTATGGGGGTAATGCTATCGATTCCAGCGCAC AAACGGCTCGTGTGTATCGAATGAAGAAATAAGAGAGGAAAATATACATC GATTGTACAACACGTGAATTATCGTGTTCTAACCCCTCGGTACACGAAGA TCGTGGATATCTCGGCCTACACCAATTAGCATACACCGCTATCAAACACG CGAACATGCCTCATCACTAGCGTCCATTTGTATCTGGAGTAAAGCGCCTG CAGACAGAAGTTGAATCAGTTTATGACGAAACACTGATCGCCTATAGGTC GATCGTTCATTTTAGCTCGTAGCATGGGTCGCTTCGCACTTCTGCCAGCT GATAGTTATGCATGAGAGCCTTCCAGGGCAGTTAGAAAACGGTCTATTCG TCGTTCTCCTGCGTTTGTACGAAGGCACCTGTTGGCGCACAAATATCGAA ATATAACTGCACGGGCGGAACGCTGCTCTGCACTGTCGAAAGCGCCCTGC TGTCTAATGACATACCAGGTCATCTATCGACGGGATGTTCGCAACAAGGT TTTTATCACCAGGGGTCGTACTCTTTCTCATGATGCTGCACTGAAGACCC ATTTTGGATGTAACCAACCAGGCAACTGCTCCAGGAAGGATCTACTTGAA GCTGTATTTATACAGACGAACGCTTGCTTCACTGTAGAATTATTTGCAGT CATCCATTCACGCAGGAATGCTCTACTAGGAGCGCTGTTGCGGGGTGTTC ACCCACACAAAAATACCGATGGCATAGTGTCCATCGAATACAGGAATATT TGTCCGAGATTGCGGATGGCACAGAGTGCATCGAATACGGTATTCGCTCG AGCGCTATTATTGGTATATATTCGTGTCTAGTATTTGTATTAGTCCGAGG GGTTAACTTTTGACGACAGGCAGAATTTGTTCTGTTCTGTTCTGTTCTAT TCTGTTCTTTTATTTTTGTCCCATTATGTTCTATTCTGTCGTATTTGTTC AAGAGTACGTACGATGGTGTTGCTTAATTTTTTTATTTGACCCGCGGTCC CCCTTTTGTTTTTTTTGCTCTCGTTTTGACTGAATGATGGATTAATTGCA AATATCATACTCCAGGGGCTCTTGTACCTGATGCAAGGCCACATCCTCCC AAGGCTTGCTGCTAGATGGGGGAAGACTTTGGTCTTTCTCAGCTTTGGAT TCCTCGCCATGAAATCCAGGTGACTCTTGGATTTTGGGACGTTAGAGCGG ATGAATGCACCTGTGTAAGAGGAGTGCATGACGTACATGGGGGATATTCC TGTTTGTCTACCACGACTGCTAGATATTTGTTAATAGTACGCTAAGGTAG ACTTCGTAATCGTTTCGGAACAGTTTCCAAGCTTGTACTCAGGTAACCTT TGAAACCGAATTCTTATTGGTACTATGGGTATATAGTGGGTGCACACCGA GTGGTTGTGCGCCAGTATTGATGGGTCTTTTTTATATATATATATTTTTT CCATCTTTTTTTAGTCGCAAATTAGTTCGTCTATCTGTCAGAATCCTCAG TCCGAAGCTGCAAGTGTAATGCCTGGGTTTTTGCCTTCTATCATTGCGCG ATTGGGGCAGCAGTTGATCCCACTCGCTCGTCAACGGTAGAGTTGACGGT GGTCTTAAGAGTATTCTTGTCGCTTCCATGAATGGGTCCGGGGCGAAAAA AACTGGAGGATGATTTCACTGGGTGTAGCGCGACTTGGCGATGAAAGATT TTACCGTCAGAGACGGCTCTGATCTGATCTGATCAGATCAGCATTAGAGT GTTCACCGCTTTGCCGAAGACCATGGTTTGGAAATACCTACAACGTGGAT TGACCATAAAAGTCAATATACTATATCAACTCATGCAAGAGGTACGATGA TATCACCGTCCTGAACAGTTTTGACGCATGCGCATCACGCGTAAGGCACG TGTTTTTGCTCAAATCGGCGCCAATGGCGCCGATTCGAGCTCTTGCCATG GCACAATATGCCCATTACGATTGGGGATGAGGGAAGGTTGTACGGGTAGC GTTAGAGAGAGGTTGGTTTTGCTCGCGTCGGGACATGAAAAGAAAATGTC AACCATGCGAGACAATTTATCTTGTCAAACCATATCTTTTGGCCAAGTGG TAAACCGACAGGCCTCCGGATCAGACCATTCACGGGTCGTAATTTATCGC TCATTAAAAAGCGGTAGAATATATCGTTGTACCGGTGCACCGTCTGTTTG CAGTCTATGTACTGCGGCTACTGATTCATGTGTGTGCTATTGCTGCCGAC CGCCTCGTCTCCCCCCCCCCCCCCCCCCCCCCTGTGCGATCTGGTCCCCT GCGTGCCTACGGCCTGCTTTTTTTTTTTTTTTGACCAACCAATGGTGTGG CATGGCAGAACGTTTTCGGTCTTGAACGCCCGGCGTCCTGAAGTTTCGTC GGAAAAGCAGGCGAAAGTCGATCGTCGTCGTCCTGAGTGGATGCCGCCCC CCAAGGTGTTCCCCTTCATCTGGATCACCATTGGCGTACTGAGGGCTGTA TCGTCTACCATGGTGAGTTAAGAGAGGGAGAGAGGGGGCAAGAGAGAGAG ACTGGCTGAATGACTGTGGGTTCAATTCACGTGTCGATAAGACTTCTTGC ATCTCGTATACTATGGTCTTGAAGTCTTGAGATCTTCGGATTTGGGGATT TGGGGATTTTGATTTCTCGGTATTTGGATGCTGATGAATACTCACCATCC ATGAAATAGATTGGTGTATATAGACCGGAAAAAATGATTCGGAATGACTA TCACCATCACTGACTCTCACTTTGACGGATTGAGTGATACCTGGTACGGA CTGTGTTCGTTTGCCTGATTTTGGTTTGCCAACCCGAAGGTGTTCGAGGC TCTCGGCGGAAAGCTGGTGACAACTCCCATCGCGGCCATGGTGCTGCACC TGAGCGTTGGTGACACCTGGAACCACATCAACAATGTGGAGAAACGCCTT GGTGTGGCCGTACCTGTGGTGTTTCTAGTGGTGAGCTAAAATAAAATGAA ACCTAAGAACCCGCCGCCGCAAATAGTTCATGTATGACGCATCGTGCAGC GTTGCAAGCTATTTAATTAAGTTGATAACTAACACTTGTCGCAGTGTTGT TTTCACCGGATCCTTAATTGTTTTCACAGGCGTTTTTTAGTAGTTGACAA GAGAAATTGGGCAGTAGGACGTATGTGAGTTACAGCGGGGAGCAAGTGGG CACGGAAGCTGTGTAACCAGTTCAAGGTTTTAGGTTTTGAAGTGAGTGCT AGTAATAGGAGTACTAGAGTTTGTAGTCCGTGATTTCGTCTTGAGCGTAT CCTCACACACAAGGAGAACTCGCTTCGCTTGCACGAGTATACACGAAGAG CTGTTCCAAAAGGATGGTAGTGGAAGACAGACGATCTTACCGTCTTGAGC GGTGAGGATTTGTTCTGTTGACAAGCATGGACGTGTAACTGGTCGAGTGT GATGACGCGAAGTTTTTGCGTGTGACTTTGTCCTTGTCGGTTTATTTTGT TTGTTTGTTAGAGGATCCGCTTGAGATAGTAAAGCCTTATAGCTCGGTAT CTTTCGGCTGTTGTTTGTTATACATGCGTTTTATAGTGCGTTTTTGTTTT TGCAGCCTTGTGCAGGAGGAGTAAATAATAAAGCCTCTTGAGGGGGGTAA TTGAGGGTCACTGTCGTTTTTTTGTTTTGGTAATCTTCTCGTGTCGTTTA GACGCAATGACATAGGAATGTTTTATACCGTTACCCGTTTTTATTTTTTT ATTATTATAGGTTTCTTTTAAACTTTTGTTAAAGAGGTTCATTTGCACTT TCCTTCCCCTGCCCCCCCCCGTCTCCCCTTGCCCCTCCCCCCTCCCCCCT CCTTCCTTCCTCCCTTCCCCCCTCCCCCTCCCCGACCCTCAACAGGTTTT GATTTGTGTTGTATTTGCACTTGAACTGGGCTCACGGGAAGTATTTTGTA AGGAGTTGATTATCATGTAAATACGTTGTGTTGATGGTTTGTTCTTTATT TGTCTATATATTCGGCCGGCCACTCAAATCCTGCACTCATCGCGACGACG ACCACCACCACCACCACCACCACCACCACCCCGGAAGAATACGAGTGCTT TGAGTGGTTTAGACGAGAAATTTTCCCCAAGTATCCGTTGCATTGTTAGC ATTTGCGGGCATATAGAATGAAGTGTGTACTCCGTATTTATTCCTTTAAA AAATGTTTGTTGCGGCAGTTGTCCATGGTCATGCTGAACCTTGAGGCGAA TAGCTAAAAAGGCACGTTGACACTATTTAAGATATTAATGCTCGTCCGGA GGGGTTGAAATCGAGATCTTTCACGTACATATACCATGCGTTTCTCCTGT CCTGATCGTAGGCATTGTGGACATGCAGTGTGAGGGGGATTTGTATCCGC CGTGCTGATGTGTCAATGGTTTGACGCTTTGACTGTTTGTTGGTACGGCG GCTTTATAGAGTCGGAATATTTCGATATGCATGCTGGACATTGCGATATG TTATGTTGGTGATGGTACGGTATAGCTAAGTATCGTCAGTACAGTACAGT ACACGTATGGAGAACATTATTTGGTTCATCGCAATACGGTACGGTCAGTC ATAACACACTATCATGGAGTACGTATCACTCAGCTGTTTTGATAAGGATT TTTACGAGATAAGAACAATTCATCCTCTCCGTGTCCCAATACTTCGTGAT TTGTCATATTCTAATGCAGTGGCTGAGCGTCGCGCACGCAGCGTTTAGGT ACTACCAGGCGTTGCCCAAAGCAGGACTCGTCCTGCTCCCCAGCGTCGTG TGGATAGCGGTTGGTGAGTCACGTTCCACTTATTTTTGGTGAACGTTTTG TGGGGGTATTGTTTTCCATCATTGCTCGCTTATGTGTTGATTTTACCAAT AGTTTGTGTCATTGTCCATTGCAGTTTTTCTGCGAATTTTCCACTGTTTA TTTCAATGTGTGTATTCTATAATTACCTTTGACGTTTTTTTGGTGTTGTA TTGCGTGTCGTTAAAAACGTCGAATATCTTGGAATACATCTTAAGCTGCA AAGCACGTCCAATTTTCCTCCGAATTTATCAAGGAGAAATACGCTTTCGA TACAACACAAATATTTTATTCAAGTTATAGGTCCACCTAGGCTGCTTGTT GTGGTCGTTCTAGAGGCGATGTTTGAAGCTTTCCCCCCCCCCGAAGTATC AGACGGCGGATAAAAATGGACCGCTTATTCGATGTTCATGAGGCTTGTAT AGCCTGAGTCCGGCTCAAGACAGGTAGGAATGTTCACAGCTCATGTACTG ACATTCACCATGGGATAACCACAGAGGGTCGCAGACCAGAGTCTGACAAG GAGATGAGAGGGAGCGTGAGAGAGGTGGGCATCTTACACAGAGCCAAAAC ATTGGAAACACAGAACCAAAATCCAGAACCAATCAGACTCCGAACCAGAC AGAGATCAATCCAGAACCAGATACACATTAAAGGGCAGGTTCGGAGTAAT ATCACAGTCCGCGAACACTCGAAGAACAATCTTTTTGTCTAGTAGGGACC CACGTCCATGAGGCTATCTCCGTGTTTCATGTTTTACGCACAGTACACAT GCGAGTTATACAGTGATGCGTGGTCGAAGAGGCACGAGGAGTTCTGCTAC TTGGTCGTGATGTGGGTCGGAATTTTTTGTCTTTTTTTTTTTTAACCCCC GGAAGGCTGAGGCAAAAACCTTTACCGATGCTTTCATACTTAAGTATCTT TACCAAAGTATGTCTACATTTCCTTTATTTCTTTGTCATTTGAACAGGAC TGATTCTGTTGGCCTACTCTGAAAATCCAAACATTCTTTTAAAAGTCCGT TCAGGATTTTAGTTCACCTAAATAGGGAGTATGCGTGAGTGGATTTGAAT GGGTTGTAGGCGAGATGCTAGAGGAGTGAGCACTGTTCATGCACAGCTCG TTCAGCGTCATGTACTCCCAGCTCTCACAGTGGGGATAGCTATTGCCCAG GGGCTATGCGCAGCACTCCAAAGTATGTGTACAATTTGCTTATGGTGATT TGCGCATTGAACTATATATTTTCTATATATTGGGCGTCCAATAGTCATGT TCTTCTGCTACAAATTTGGTCCACAAAGTCAGCTTTTCGGGTGTACCTGT TTTTGGGAGATTTATGAAGGGTATAAGGAGTAGTACTCAACATGTGAGAT ACCCCCCCCCCCTTCCTCTATTCCTCAACAGCGAACCTACTGGTGCAGTC TATTTGGCGCCTCAACGGGAAGGAGTCTCTGTATCCTGCCAAGAAGACCT CATGAGCTAGCTTTCTGCACGGAACGGCCACGACCTTGTTCTTGCTTCAA TTCCATATGTGCTGTGCTGATTGATGACCCGCTTGTGCTTTGGGTGCGGA GAGCTGAGCTGTTTGCAGCGGACGAGATACAAAGAGAGAGAGAGCGGAGA GAGAGCGATAGACAGACAGACGGAGATCGGCATGGAAATAGATGTTTACC TTGGAGTAATTTGATGGGCATATGCCACCACTCGTATCAGGCAGGTCTTA AGCCAGTGGTCTTTTTACGAAGTCTGAGACGGCGCTTCAATCCTTTAATA TTGAATAATGACAGTCGGAACTTTTCTAAATGGTGATGTTTTCCCGCCGA TGTAATACTGATGTTTCGTCTCGAATGCGAGCCCGCTGCCAGCATCTCTA GTCCTTTGGTCGCGTTTTGACAGAGTTGCGTTTGAGTGCTAACCTCGGTG CATAAGCGATTAGTATTAAAGGTGAAGGCCGTTCTGATCGAGAGCATCTT TCCCCCTTCCTGTTTTTTTTTCCTAACATATGAGAAAAAAAAAAAAATGC CTGCAACGTTCATTTTTTA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig1079:4659..17677-

>mRNA_H-paniculata_contig1079.503.1 ID=mRNA_H-paniculata_contig1079.503.1|Name=mRNA_H-paniculata_contig1079.503.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1896bp|location=Sequence derived from alignment at H-paniculata_contig1079:4659..17677- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACATGCCCACTAGGATATCAGCCGCTGTCCTAGTAGCGGCAGCGGC
AACTTGCACGCTGACCACTATCGGATGCACCGCCTTCGTCGTCGCGCCGT
CAAACAGCGTGCGGCTGCATCAGCGTGTTCATCATAATAACCCTGATTTC
ATTCCGCACAAACCTGCTTTGGATGCTGCTAGGCTGGTGAAGTGTGGCAT
CGGGGGGCAGCTATTGAGGAATGAGGCTAGGAGTGGTGCGGGGGCAGCAA
TGCTCCGCGCATCGGACGCCCTTTCTTCAGATGGAGGAGGTGGAGACAGT
GGCGGCTCCCGTCCAGCTATGGATTTCGCGGCGATCGCGAAATGAACATG
CCCACTAGGATATCAGCCGCTGTCCTAGTAGCGGCAGCGGCAACTTGCAC
GCTGACCACTATCGGATGCACCGCCTTCGTCGTCGCGCCGTCAAACAGCG
TGCGGCTGCATCAGCGTGTTCATCATAATAACCCTGATTTCATTCCGCAC
AAACCTGCTTTGGATGCTGCTAGGCTGGTGAAGTGTGGCATCGGGGGGCA
GCTATTGAGGAATGAGGCTAGGAGTGGTGCGGGGGCAGCAATGCTCCGCG
CATCGGACGCCCTTTCTTCAGATGGAGGAGGTGGAGACAGTGGCGGCTCC
CGTCCAGCTATGGATTTCGCGGCGATCGCGAAGTACATCGCGGGAACGGG
AGCGGAATTCAGCGTCATAATGGTACATCGCGGGAACGGGAGCGGAATTC
AGCGTCATAATGGGGCTCTTGTACCTGATGCAAGGCCACATCCTCCCAAG
GCTTGCTGCTAGATGGGGGAAGACTTTGGTCTTTCTCAGCTTTGGATTCC
TCGCCATGAAATCCAGGGGCTCTTGTACCTGATGCAAGGCCACATCCTCC
CAAGGCTTGCTGCTAGATGGGGGAAGACTTTGGTCTTTCTCAGCTTTGGA
TTCCTCGCCATGAAATCCAGAACGTTTTCGGTCTTGAACGCCCGGCGTCC
TGAAGTTTCGTCGGAAAAGCAGGCGAAAGTCGATCGTCGTCGTCCTGAGT
GGATGCCGCCCCCCAAGGTGTTCCCCTTCATCTGGATCACCATTGGCGTA
CTGAGGGCTGTATCGTCTACCATGAACGTTTTCGGTCTTGAACGCCCGGC
GTCCTGAAGTTTCGTCGGAAAAGCAGGCGAAAGTCGATCGTCGTCGTCCT
GAGTGGATGCCGCCCCCCAAGGTGTTCCCCTTCATCTGGATCACCATTGG
CGTACTGAGGGCTGTATCGTCTACCATGGTGTTCGAGGCTCTCGGCGGAA
AGCTGGTGACAACTCCCATCGCGGCCATGGTGCTGCACCTGAGCGTTGGT
GACACCTGGAACCACATCAACAATGTGGAGAAACGCCTTGGTGTGGCCGT
ACCTGTGGTGTTTCTAGTGGTGTTCGAGGCTCTCGGCGGAAAGCTGGTGA
CAACTCCCATCGCGGCCATGGTGCTGCACCTGAGCGTTGGTGACACCTGG
AACCACATCAACAATGTGGAGAAACGCCTTGGTGTGGCCGTACCTGTGGT
GTTTCTAGTGTGGCTGAGCGTCGCGCACGCAGCGTTTAGGTACTACCAGG
CGTTGCCCAAAGCAGGACTCGTCCTGCTCCCCAGCGTCGTGTGGATAGCG
GTTGTGGCTGAGCGTCGCGCACGCAGCGTTTAGGTACTACCAGGCGTTGC
CCAAAGCAGGACTCGTCCTGCTCCCCAGCGTCGTGTGGATAGCGGTTGCG
AACCTACTGGTGCAGTCTATTTGGCGCCTCAACGGGAAGGAGTCTCTGTA
TCCTGCCAAGAAGACCTCATGACGAACCTACTGGTGCAGTCTATTTGGCG
CCTCAACGGGAAGGAGTCTCTGTATCCTGCCAAGAAGACCTCATGA
back to top