mRNA_H-paniculata_contig10786.499.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10786.499.1 vs. uniprot
Match: D7FJ26_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ26_ECTSI) HSP 1 Score: 182 bits (461), Expect = 6.810e-48 Identity = 78/106 (73.58%), Postives = 93/106 (87.74%), Query Frame = 1 Query: 283 QGMMVYYHADRLVRAVSYVRRGDLERGKFATPQEVAEAGSPDCSICYERMVRPVLLPCEHMFCGECVTEWLEREHTCPLCRLEIPTTNPIPRSLRNGHTSILPQIL 600 +GM V + ADR VRA YVRRG+L+RGK ATP+EVAEAGSPDCSICY+RM RP+LLPC H+FCGECV EWLERE TCPLCR E+P++NPIPRSLR+G T+++PQIL Sbjct: 406 KGMQVSFRADRFVRAACYVRRGELDRGKLATPEEVAEAGSPDCSICYDRMSRPLLLPCNHLFCGECVAEWLERERTCPLCRAEVPSSNPIPRSLRDGRTTVVPQIL 511
BLAST of mRNA_H-paniculata_contig10786.499.1 vs. uniprot
Match: A0A6H5L8S9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8S9_9PHAE) HSP 1 Score: 180 bits (457), Expect = 7.280e-46 Identity = 77/106 (72.64%), Postives = 92/106 (86.79%), Query Frame = 1 Query: 283 QGMMVYYHADRLVRAVSYVRRGDLERGKFATPQEVAEAGSPDCSICYERMVRPVLLPCEHMFCGECVTEWLEREHTCPLCRLEIPTTNPIPRSLRNGHTSILPQIL 600 +GM V + DR VRA YVRRG+L+RGK ATP+EVAEAGSPDCSICY+RM RP+LLPC H+FCGECV EWLERE TCPLCR E+P++NPIPRSLR+G T+++PQIL Sbjct: 667 KGMQVSFRVDRFVRAACYVRRGELDRGKLATPEEVAEAGSPDCSICYDRMSRPLLLPCNHLFCGECVAEWLERERTCPLCRAEVPSSNPIPRSLRDGRTTVVPQIL 772
BLAST of mRNA_H-paniculata_contig10786.499.1 vs. uniprot
Match: A0A7S2XZV9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZV9_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.760e-28 Identity = 53/106 (50.00%), Postives = 68/106 (64.15%), Query Frame = 1 Query: 283 QGMMVYYHADRLVRAVSYVRRGDLERGKFATPQEVAEAGSPDCSICYERMVRPVLLPCEHMFCGECVTEWLEREHTCPLCRLEIPTTNPIPRSLRNGHTSILPQIL 600 +G++V LV RG LE G F TP +AEAGSP CSIC+E M PV+L C HM+C C+ EWLERE TCP CR ++ ++N IP + R+G T I PQ+L Sbjct: 43 KGLLVSRRLQALVEGAMQFIRGGLEHGTFVTPDGLAEAGSPACSICFEPMSHPVMLHCRHMYCETCIEEWLERESTCPNCRSQVSSSNSIPVAFRDGRTMIFPQLL 148
BLAST of mRNA_H-paniculata_contig10786.499.1 vs. uniprot
Match: A0A7S3XZP7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZP7_HETAK) HSP 1 Score: 112 bits (279), Expect = 1.950e-25 Identity = 46/108 (42.59%), Postives = 69/108 (63.89%), Query Frame = 1 Query: 274 FWEQGMMVYYHADRLVRAVSYVRRGDLERGKFATPQEVAEAGSPDCSICYERMVRPVLLPCEHMFCGECVTEWLEREHTCPLCRLEIPTTNPIPRSLRNGHTSILPQI 597 F+ + ++ + + +S R+G+LE G +AT + +AEAG PDCSIC+E + +PV L C H+FC CV +WL++E TCP+CR + N IP R+GHT +P I Sbjct: 58 FFIKNFLIIHRFRVFLAGLSSYRKGELEYGAYATAETLAEAGHPDCSICFEALTKPVQLTCTHLFCEACVGQWLDKEQTCPVCRAAVSRANAIPARYRDGHTPWVPMI 165
BLAST of mRNA_H-paniculata_contig10786.499.1 vs. uniprot
Match: A0A7S2S9Z2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S9Z2_9STRA) HSP 1 Score: 116 bits (291), Expect = 8.040e-25 Identity = 54/86 (62.79%), Postives = 63/86 (73.26%), Query Frame = 1 Query: 349 DLERGKFATPQEVAEAGSPDCSICYERMVRPVLLPCEHMFCGECVTEWLEREHTCPLCRLEIPTTNPIPRSLRN--GHTSILPQIL 600 DLE G+ A+ QEVAEAG PDC ICY+ MV PVLLPC H+FC ECV EWLERE TCPLCR + PT+ + S N G TS+LP +L Sbjct: 341 DLEIGRLASSQEVAEAGHPDCPICYDEMVSPVLLPCGHLFCEECVLEWLEREKTCPLCRADTPTSPLLASSRGNSSGSTSLLPHVL 426
BLAST of mRNA_H-paniculata_contig10786.499.1 vs. uniprot
Match: M4B5F6_HYAAE (RING-type domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B5F6_HYAAE) HSP 1 Score: 105 bits (263), Expect = 2.780e-23 Identity = 55/120 (45.83%), Postives = 73/120 (60.83%), Query Frame = 1 Query: 259 FLLALFWEQGMMVYYHADRL-VRAVSYVRRGDLERGKFATPQEVAEAGSPDCSICYERMVRPVLLPCEHMFCGECVTEWLEREHTCPLCRLEIPTTNP-----IPRSLRNGHTSILPQIL 600 F A +G+++ H R+ V A S V G LE G + + E+ EAGSPDCSICYE M +PV L C HMFC ECVTEW + E +CPLCR + T+N + +G TS++PQ+L Sbjct: 41 FTFAYLLIKGVVLATHGKRIFVLARSLVTLG-LEFGVYVSSDELVEAGSPDCSICYEPMNQPVKLACSHMFCEECVTEWFDHERSCPLCRASVGTSNSTGAENVKPQFLDGRTSLVPQLL 159
BLAST of mRNA_H-paniculata_contig10786.499.1 vs. uniprot
Match: A0A662X521_9STRA (RING-type domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X521_9STRA) HSP 1 Score: 106 bits (265), Expect = 2.820e-22 Identity = 55/119 (46.22%), Postives = 75/119 (63.03%), Query Frame = 1 Query: 262 LLALFWEQGMMVYYHADRLVR-AVSYVRRGDLERGKFATPQEVAEAGSPDCSICYERMVRPVLLPCEHMFCGECVTEWLEREHTCPLCRLEIPTTN-----PIPRSLRNGHTSILPQIL 600 LL++ +QG+++ R+ A S+V G LE G + E+ EAGSPDCSICYE M +PV LPC HMFC ECVTEW +RE +CPLCR + ++ I +G TS++PQ+L Sbjct: 167 LLSVVCQQGLILATQGRRIYALARSFVTLG-LEFGAYVPHDELMEAGSPDCSICYEAMRQPVKLPCSHMFCEECVTEWFDRERSCPLCRASVGPSSLTADDGIKPQYLDGRTSLVPQLL 284
BLAST of mRNA_H-paniculata_contig10786.499.1 vs. uniprot
Match: A0A835ZGZ2_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGZ2_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.560e-21 Identity = 57/142 (40.14%), Postives = 76/142 (53.52%), Query Frame = 1 Query: 256 FFLLALFWEQGMMVYYHADRLVRAVSYVRRGDLERGKFATPQEVAEAGSPDCSICYERMVRPVLLPCEHMFCGECV----------------------------TEWLEREHTCPLCRLEIPTTNPIPRSLRNGHTSILPQI 597 +F A +G+++ A L RA+ V R LE G++ T +E AG DCSICYE M +PV LPC+HMFC C+ +EWLERE TCPLCR E TT+P+P + R+G TS+LP + Sbjct: 468 YFAAAYLLFKGLVLASRARMLARALRSVFRSGLEHGRYCTGEEAQAAG--DCSICYEAMTQPVKLPCDHMFCEVCLAESLSSCYVCFRLQFANPVLHVSFASRDSEWLERERTCPLCRAETTTTDPLPTAFRDGRTSLLPVV 607
BLAST of mRNA_H-paniculata_contig10786.499.1 vs. uniprot
Match: A0A662WPS6_9STRA (RING-type domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WPS6_9STRA) HSP 1 Score: 106 bits (264), Expect = 2.180e-21 Identity = 54/116 (46.55%), Postives = 72/116 (62.07%), Query Frame = 1 Query: 271 LFWEQGMMVYYHADRLVR-AVSYVRRGDLERGKFATPQEVAEAGSPDCSICYERMVRPVLLPCEHMFCGECVTEWLEREHTCPLCRLEIPTTN-----PIPRSLRNGHTSILPQIL 600 +FW+ V + R+ A S+V G LE G + + E+ EAGSPDCSICYE M +PV LPC HMFC ECVTEW +RE +CPLCR + ++ I +G TS++PQ+L Sbjct: 280 IFWQVLWTVLVNGRRIFALARSFVTLG-LEFGAYVSHDELMEAGSPDCSICYEAMRQPVKLPCSHMFCEECVTEWFDRERSCPLCRASVGPSSLTADDGIKPQYLDGRTSLVPQLL 394
BLAST of mRNA_H-paniculata_contig10786.499.1 vs. uniprot
Match: A0A024GDB6_9STRA (RING-type domain-containing protein n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GDB6_9STRA) HSP 1 Score: 107 bits (266), Expect = 4.180e-21 Identity = 54/98 (55.10%), Postives = 68/98 (69.39%), Query Frame = 1 Query: 349 DLERGKFATPQEVAEAGSPDCSICYERMVRPVLLPCEHMFCGECVTEWLEREHTCPLCRLEI--------PTTN---PI---PRSLRNGHTSILPQIL 600 +LE G + T ++V EAGSPDCSICYERM RPV L C H+FC ECV+EWL+REH+CPLCR + PT + PI P+ L +G TS+LPQ+L Sbjct: 459 NLEFGTYVTEEDVVEAGSPDCSICYERMKRPVKLSCSHIFCEECVSEWLDREHSCPLCRASVRSADTSIMPTNSARYPIQSRPQYL-DGSTSLLPQLL 555 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10786.499.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10786.499.1 >prot_H-paniculata_contig10786.499.1 ID=prot_H-paniculata_contig10786.499.1|Name=mRNA_H-paniculata_contig10786.499.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=150bp MYCFPPLENCFPEPSQQRLHRAFVVNQVCTCAMCFFLLALFWEQGMMVYYback to top mRNA from alignment at H-paniculata_contig10786:834..4139+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10786.499.1 ID=mRNA_H-paniculata_contig10786.499.1|Name=mRNA_H-paniculata_contig10786.499.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3306bp|location=Sequence derived from alignment at H-paniculata_contig10786:834..4139+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10786:834..4139+ >mRNA_H-paniculata_contig10786.499.1 ID=mRNA_H-paniculata_contig10786.499.1|Name=mRNA_H-paniculata_contig10786.499.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=900bp|location=Sequence derived from alignment at H-paniculata_contig10786:834..4139+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |