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Homology
BLAST of mRNA_H-paniculata_contig10779.491.1 vs. uniprot
Match: D8LS01_ECTSI (UBC core domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS01_ECTSI) HSP 1 Score: 270 bits (690), Expect = 1.950e-83 Identity = 135/143 (94.41%), Postives = 140/143 (97.90%), Query Frame = 3
Query: 225 MAASNLPRRIVKETQRLLLEPVPGISATPYEDNLRYFSVVITGPEQSPYENGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASALLSAPNPDDPLANDVAEIWKTDEAQALRT 653
MAASNLPRRIVKETQRLL EPVPGISATPYEDNLRYF+VVITGPEQSPYE+GSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA LLSAPNPDDPLANDVAE+WKT+EAQAL+T
Sbjct: 1 MAASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFNVVITGPEQSPYEHGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA--LLSAPNPDDPLANDVAEMWKTNEAQALQT 141
BLAST of mRNA_H-paniculata_contig10779.491.1 vs. uniprot
Match: A0A024GCI7_9STRA (UBC core domain-containing protein n=3 Tax=Oomycota TaxID=4762 RepID=A0A024GCI7_9STRA) HSP 1 Score: 264 bits (675), Expect = 1.520e-81 Identity = 130/150 (86.67%), Postives = 139/150 (92.67%), Query Frame = 3
Query: 231 ASNLPRRIVKETQRLLLEPVPGISATPYEDNLRYFSVVITGPEQSPYENGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASALLSAPNPDDPLANDVAEIWKTDEAQALRTAREWTQRLA 680
ASNLPRRIVKETQRLL EPVPGISATPYEDNLRYF VVI GP+ SPYENG FKLELFLP+DYPM+PPKVRFLT++YHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA LLSAPNPDDPLANDVAE WK+DEA A+RTA +WT+R A
Sbjct: 5 ASNLPRRIVKETQRLLAEPVPGISATPYEDNLRYFQVVIAGPQTSPYENGIFKLELFLPADYPMSPPKVRFLTRLYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA--LLSAPNPDDPLANDVAEHWKSDEAGAVRTAADWTRRFA 152
BLAST of mRNA_H-paniculata_contig10779.491.1 vs. uniprot
Match: H3G9K8_PHYRM (UBC core domain-containing protein n=24 Tax=Oomycota TaxID=4762 RepID=H3G9K8_PHYRM) HSP 1 Score: 259 bits (661), Expect = 1.610e-79 Identity = 130/150 (86.67%), Postives = 136/150 (90.67%), Query Frame = 3
Query: 231 ASNLPRRIVKETQRLLLEPVPGISATPYEDNLRYFSVVITGPEQSPYENGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASALLSAPNPDDPLANDVAEIWKTDEAQALRTAREWTQRLA 680
AS LPRRIVKETQRLL EPV GISATPYEDNLRYF VVI GP+ SPYENG FKLELFLPSDYPMAPPKVRFLT+IYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA LLSAPNPDDPLANDVA+ WKTDEA A++ A EWT+R A
Sbjct: 2 ASALPRRIVKETQRLLAEPVAGISATPYEDNLRYFQVVIAGPQSSPYENGIFKLELFLPSDYPMAPPKVRFLTRIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA--LLSAPNPDDPLANDVADHWKTDEAGAVQMAAEWTRRYA 149
BLAST of mRNA_H-paniculata_contig10779.491.1 vs. uniprot
Match: A0A484ED03_BRELC (UBC core domain-containing protein n=13 Tax=Oomycota TaxID=4762 RepID=A0A484ED03_BRELC) HSP 1 Score: 256 bits (655), Expect = 1.240e-78 Identity = 128/150 (85.33%), Postives = 134/150 (89.33%), Query Frame = 3
Query: 231 ASNLPRRIVKETQRLLLEPVPGISATPYEDNLRYFSVVITGPEQSPYENGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASALLSAPNPDDPLANDVAEIWKTDEAQALRTAREWTQRLA 680
A+ LPRRIVKETQRLL EPV GISATPYEDNLRYF VVI GP+ SPYENG FKLELFLP DYPMAPPKVRFLT+IYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA LLSAPNPDDPLANDVA+ WKTDE A+ TA EWT+R A
Sbjct: 2 ATTLPRRIVKETQRLLAEPVAGISATPYEDNLRYFQVVIAGPQSSPYENGIFKLELFLPVDYPMAPPKVRFLTRIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA--LLSAPNPDDPLANDVADHWKTDEVGAVHTAAEWTRRYA 149
BLAST of mRNA_H-paniculata_contig10779.491.1 vs. uniprot
Match: A0A7S3LB23_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LB23_9STRA) HSP 1 Score: 253 bits (646), Expect = 4.210e-77 Identity = 125/152 (82.24%), Postives = 136/152 (89.47%), Query Frame = 3
Query: 225 MAASNLPRRIVKETQRLLLEPVPGISATPYEDNLRYFSVVITGPEQSPYENGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASALLSAPNPDDPLANDVAEIWKTDEAQALRTAREWTQRLA 680
MA S LPRRIVKETQRL+ EPV GISATPY+DNLRYF+V I GPE SPYE G F+LELFLP+DYPMAPPKVRFLTKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQA LLSAPNPDDPL N+VAEIWK DEA+A+R A+E+TQ A
Sbjct: 1 MATSQLPRRIVKETQRLIAEPVAGISATPYQDNLRYFAVAIEGPEDSPYERGVFQLELFLPADYPMAPPKVRFLTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQA--LLSAPNPDDPLDNNVAEIWKKDEAEAIRRAKEFTQNFA 150
BLAST of mRNA_H-paniculata_contig10779.491.1 vs. uniprot
Match: A0A7S2FBQ7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FBQ7_9STRA) HSP 1 Score: 249 bits (636), Expect = 9.220e-76 Identity = 123/156 (78.85%), Postives = 139/156 (89.10%), Query Frame = 3
Query: 225 MAASN--LPRRIVKETQRLLLEPVPGISATPYEDNLRYFSVVITGPEQSPYENGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASALLSAPNPDDPLANDVAEIWKTDEAQALRTAREWTQRLARA 686
MAA++ LPRRIVKETQRL+ EPVPGISATPYEDNLRYF++ + GP SP+E+G F+LELFLP+DYPMAPPKVRFLTKIYHPN+DKLGRICL+ILKDKWSPALQIRTVLLSIQA LLSAPNPDDPL N VA++WK DEA AL TA EWTQ+ A+A
Sbjct: 1 MAAADGGLPRRIVKETQRLMAEPVPGISATPYEDNLRYFNIALAGPADSPFESGVFRLELFLPADYPMAPPKVRFLTKIYHPNVDKLGRICLNILKDKWSPALQIRTVLLSIQA--LLSAPNPDDPLDNGVADVWKNDEATALATAAEWTQQYAQA 154
BLAST of mRNA_H-paniculata_contig10779.491.1 vs. uniprot
Match: A0A7S0LHS8_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LHS8_9EUKA) HSP 1 Score: 249 bits (637), Expect = 1.130e-75 Identity = 122/151 (80.79%), Postives = 135/151 (89.40%), Query Frame = 3
Query: 231 ASNLPRRIVKETQRLLLEPVPGISATPYEDNLRYFSVVITGPEQSPYENGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASALLSAPNPDDPLANDVAEIWKTDEAQALRTAREWTQRLAR 683
A LPRRI+KETQRLL EPV GISATPY+DNLR+F+V+I+GP SPYE G FKLELFLP +YPMAPPKVRF+TKIYHPNID+LGRICLDILKDKWSPALQIRTVLLSIQA LLSAPNPDDPLANDVAE WK DE +A++TA+EWTQ AR
Sbjct: 13 ADLLPRRIIKETQRLLSEPVTGISATPYQDNLRHFNVIISGPGSSPYEGGIFKLELFLPEEYPMAPPKVRFMTKIYHPNIDRLGRICLDILKDKWSPALQIRTVLLSIQA--LLSAPNPDDPLANDVAEHWKRDEPEAIKTAKEWTQHYAR 161
BLAST of mRNA_H-paniculata_contig10779.491.1 vs. uniprot
Match: A0A7S4B500_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B500_CHRCT) HSP 1 Score: 249 bits (635), Expect = 1.810e-75 Identity = 120/151 (79.47%), Postives = 135/151 (89.40%), Query Frame = 3
Query: 234 SNLPRRIVKETQRLLLEPVPGISATPYEDNLRYFSVVITGPEQSPYENGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASALLSAPNPDDPLANDVAEIWKTDEAQALRTAREWTQRLARA 686
S LPRRI+KETQRLL EPVPGISA+PY+DNLRYF+V+I GP SPYE G FKLELFLP +YPMAPPKVRF+T++YHPNID++GRICLDILKDKWSPALQIRTVLLSIQA LLSAPNPDDPLANDVAE WK DE A++TAREWT++ A A
Sbjct: 15 SLLPRRIIKETQRLLTEPVPGISASPYKDNLRYFNVIIAGPSSSPYEGGIFKLELFLPEEYPMAPPKVRFMTRMYHPNIDRIGRICLDILKDKWSPALQIRTVLLSIQA--LLSAPNPDDPLANDVAEQWKVDEPAAIQTAREWTKKYAAA 163
BLAST of mRNA_H-paniculata_contig10779.491.1 vs. uniprot
Match: A0A7S2YJB3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YJB3_9STRA) HSP 1 Score: 251 bits (640), Expect = 2.330e-75 Identity = 128/172 (74.42%), Postives = 144/172 (83.72%), Query Frame = 3
Query: 168 FECESKITEDIG*REE*SKMA-ASNLPRRIVKETQRLLLEPVPGISATPYEDNLRYFSVVITGPEQSPYENGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASALLSAPNPDDPLANDVAEIWKTDEAQALRTAREWTQRLA 680
F C+S R+ KMA +S LPRRIVKETQRL+ EPV GISATPY+DNLRYF+V I GP SPYENG F+LELFLPSDYPMAPPKVRFLTKIYHPN+DKLGRICLDILKDKWSPALQIRTVLLSIQA LLSAPNPDDPL N+VAE+WK++E +A+R ARE+T+ A
Sbjct: 40 FCCKSSSLSVSNRRQNLIKMADSSQLPRRIVKETQRLIAEPVQGISATPYQDNLRYFAVAIEGPADSPYENGVFQLELFLPSDYPMAPPKVRFLTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQA--LLSAPNPDDPLDNNVAELWKSNEVEAIRRAREFTESFA 209
BLAST of mRNA_H-paniculata_contig10779.491.1 vs. uniprot
Match: A0A7S3RBI3_9SPIT (Hypothetical protein (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3RBI3_9SPIT) HSP 1 Score: 248 bits (633), Expect = 3.010e-75 Identity = 123/152 (80.92%), Postives = 134/152 (88.16%), Query Frame = 3
Query: 231 ASNLPRRIVKETQRLLLEPVPGISATPYEDNLRYFSVVITGPEQSPYENGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQASALLSAPNPDDPLANDVAEIWKTDEAQALRTAREWTQRLARA 686
AS LPRRIVKETQRLL EP PGISATPY DNLRYF+V+I GP+ SPYE G FKLELFLP +YPMAPPKVRFLTK++HPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA LLSAPNPDDPLANDVAE+WK +E +AL A+ WTQ+ A A
Sbjct: 9 ASALPRRIVKETQRLLSEPAPGISATPYTDNLRYFNVIIQGPQGSPYEGGIFKLELFLPEEYPMAPPKVRFLTKMFHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQA--LLSAPNPDDPLANDVAELWKRNEPKALEEAKTWTQQYATA 158
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 272.7 |
| Seed ortholog evalue | 1.1e-70 |
| Seed eggNOG ortholog | 2880.D8LS01 |
| Preferred name | UBE2N |
| KEGG ko | ko:K10580 |
| KEGG Pathway | ko04120,ko04624,map04120,map04624 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000151,GO:0000165,GO:0000187,GO:0000209,GO:0000724,GO:0000725,GO:0000726,GO:0000729,GO:0000902,GO:0000904,GO:0001650,GO:0001932,GO:0001934,GO:0002218,GO:0002221,GO:0002253,GO:0002376,GO:0002429,GO:0002682,GO:0002684,GO:0002753,GO:0002757,GO:0002758,GO:0002764,GO:0002768,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006301,GO:0006302,GO:0006303,GO:0006310,GO:0006325,GO:0006355,GO:0006464,GO:0006468,GO:0006508,GO:0006511,GO:0006513,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007254,GO:0007275,GO:0007346,GO:0007399,GO:0007409,GO:0007412,GO:0007416,GO:0007528,GO:0007610,GO:0007625,GO:0007626,GO:0007629,GO:0007630,GO:0008104,GO:0008150,GO:0008152,GO:0008344,GO:0008594,GO:0009056,GO:0009057,GO:0009314,GO:0009411,GO:0009416,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009653,GO:0009794,GO:0009888,GO:0009889,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010015,GO:0010033,GO:0010035,GO:0010038,GO:0010039,GO:0010053,GO:0010468,GO:0010556,GO:0010562,GO:0010604,GO:0010638,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0010992,GO:0010994,GO:0016043,GO:0016310,GO:0016567,GO:0016569,GO:0016570,GO:0016574,GO:0016740,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0019538,GO:0019725,GO:0019787,GO:0019899,GO:0019941,GO:0021700,GO:0022008,GO:0022607,GO:0022622,GO:0023014,GO:0023051,GO:0023052,GO:0023056,GO:0030030,GO:0030154,GO:0030163,GO:0030182,GO:0030522,GO:0030534,GO:0031056,GO:0031058,GO:0031098,GO:0031175,GO:0031323,GO:0031325,GO:0031326,GO:0031347,GO:0031349,GO:0031371,GO:0031372,GO:0031396,GO:0031398,GO:0031399,GO:0031401,GO:0031624,GO:0031625,GO:0031974,GO:0031981,GO:0032147,GO:0032182,GO:0032268,GO:0032270,GO:0032446,GO:0032501,GO:0032502,GO:0032872,GO:0032874,GO:0032879,GO:0032880,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033182,GO:0033365,GO:0033554,GO:0033674,GO:0034097,GO:0034613,GO:0034622,GO:0034641,GO:0034644,GO:0035370,GO:0035556,GO:0035872,GO:0036211,GO:0040007,GO:0040019,GO:0042221,GO:0042325,GO:0042327,GO:0042461,GO:0042493,GO:0042592,GO:0042742,GO:0043085,GO:0043122,GO:0043123,GO:0043130,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043405,GO:0043406,GO:0043408,GO:0043410,GO:0043412,GO:0043549,GO:0043632,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044390,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044452,GO:0044464,GO:0045088,GO:0045089,GO:0045739,GO:0045787,GO:0045859,GO:0045860,GO:0045931,GO:0045935,GO:0045937,GO:0045977,GO:0045995,GO:0046328,GO:0046330,GO:0046483,GO:0046530,GO:0046686,GO:0048364,GO:0048468,GO:0048471,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048589,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050776,GO:0050778,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050808,GO:0050851,GO:0050852,GO:0050896,GO:0051052,GO:0051054,GO:0051090,GO:0051091,GO:0051092,GO:0051094,GO:0051124,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051174,GO:0051179,GO:0051239,GO:0051240,GO:0051246,GO:0051247,GO:0051252,GO:0051258,GO:0051276,GO:0051338,GO:0051347,GO:0051403,GO:0051438,GO:0051443,GO:0051603,GO:0051641,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0060074,GO:0060255,GO:0060341,GO:0061057,GO:0061564,GO:0061630,GO:0061631,GO:0061650,GO:0061659,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070302,GO:0070304,GO:0070423,GO:0070498,GO:0070534,GO:0070555,GO:0070647,GO:0070727,GO:0070887,GO:0070914,GO:0071214,GO:0071310,GO:0071345,GO:0071347,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0071900,GO:0071902,GO:0072347,GO:0072665,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090558,GO:0090627,GO:0098542,GO:0099402,GO:0104004,GO:0120036,GO:0120039,GO:0120113,GO:0140096,GO:1901360,GO:1901564,GO:1901565,GO:1901575,GO:1902275,GO:1902494,GO:1902531,GO:1902533,GO:1902914,GO:1902916,GO:1903320,GO:1903322,GO:1903506,GO:1903827,GO:1905269,GO:1905392,GO:1990234,GO:2000008,GO:2000026,GO:2000112,GO:2001020,GO:2001022,GO:2001141,GO:2001252 |
| EggNOG free text desc. | protein modification by small protein conjugation |
| EggNOG OGs | COG5078@1,KOG0417@2759 |
| Ec32 ortholog description | Ubiquitin-conjugating enzyme/RWD-like |
| Ec32 ortholog | Ec-08_001540.1 |
| EC | 2.3.2.23 |
| COG Functional cat. | O |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko03400,ko04121 |
| Exons | 6 |
| Model size | 2081 |
| Cds size | 471 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10779.491.1 >prot_H-paniculata_contig10779.491.1 ID=prot_H-paniculata_contig10779.491.1|Name=mRNA_H-paniculata_contig10779.491.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp
MAASNLPRRIVKETQRLLLEPVPGISATPYEDNLRYFSVVITGPEQSPYE
NGSFKLELFLPSDYPMAPPKVRFLTKIYHPNIDKLGRICLDILKDKWSPA
LQIRTVLLSIQASALLSAPNPDDPLANDVAEIWKTDEAQALRTAREWTQR
LARASA* back to topmRNA from alignment at H-paniculata_contig10779:889..8274- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig10779.491.1 ID=mRNA_H-paniculata_contig10779.491.1|Name=mRNA_H-paniculata_contig10779.491.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7386bp|location=Sequence derived from alignment at H-paniculata_contig10779:889..8274- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCTCGCCCTCTCTTCACGGCACATCGTTCGATTACGCTGATAGCGTCGG
GAACAGCGAGGACGGATATATTTTTGTAGTCTAGGTGCATCTGAACCCTG
GCTTTTTGAAGGAGAGAGGGCGGCAACCACCAAGGGACGCTTTTGCGCGA
GGAGGTCGCGCTGTCTGTTCGAGTGTGAGTCGAAAATAACAGAAGACATC
GGGTAAAGGGAGGAGTGAAGCAAAATGGCGGCTAGTAATCTTCCCAGGAG
GATCGTCAAAGAGACGCAACGGCTACTGCTCGAGCCAGGTATTTGTTTAG
TTTTTTTTTAAAATTTGTCTGATGTTGGACCGCTAGGGCGAATAAAGTAC
GTTTACACATGTAGATGAGTGCAAAACTTCGAGATGTGTTTTTGCAGCTT
TTGTACAAATGAAGTCAGACGTTCCAAACTTTGTGTGCAGAGCATTTTCT
GTTCCTTTTTTTTTTTTTTTTTCTGTTACTCTTGTTTCATATTTTTGAAG
GTCCGGGTGTATCATCCTAAAAGGAAGCTATAGTTATTTTTCTCCTGCAG
TGGTTGTTTTACCGCCATCCCGCCTCCGTCGTGTAGTAGATGCAGTTACG
CTTTCCTGTAACGAGCCTTTCAAAAAGGCAGAGTCGTTCACTGCGAAACA
TGGAAGCATTTGCAAAATAGGGAGGGAGGGAAGCCGGAATGATCTGTGTG
TCTGTCCCCTCGTCAAGTCGTCGCCGCCATCGCGAAAAAAAAATGGAAGC
GGTTCGCTCGTTTTGTTTTTCGTTCGCCTTTCTGTACTCTCGCAGTCATT
TTATGCCTTCCACATTCGCAAGTGACAGTTCCAATTTTTTTGTTCGCTGC
GCAAAAGAAAAAAGAGGGAAAAAATTGAAATAGCATAAAACAGGAATCTA
AAGTATATATTTTTCTTTTTCGTTTTTCACTACTGTTTGTCCCTCCGGTT
CGGTCATGTTCTGTGTCGAATACAAACCTGGACCGTGGTGTTTGAGTGCG
TCGAAGCACTGATAATTGTAATAACATTCCATCCACTTTGAAGGCATTGT
TGTTGGGGGATAGCTTTGCGAGAGAAAAATGTAGGTTCGGGGCAAACTAC
CGAAGGAGAACCATCCGTAGATTTTGTAGATTCTCTTCGTTTTCATGAAT
GTGCGCGCAATGATGATGAGGGTGTAGTAGCCAATGACTGATGCTGTGGC
TGCTGCTCCGGGGCGTGAATAAGATGTTTGCATCTGTATGTCAATTCGTG
TGACTGCAGAGGGACGAAACGTAAGGTTGACGTTTTAAGGCCGTTCGATC
GGCTGGGTGGGAACTGATCCTATTCCAGGTTTTGTAATGTGGCGATGTAC
GTCATTTTCTAATGTTCGCCATTGTGAATGTCTCGCTGATTTTTTTGCGT
GTCCGATATTTATAAACGGTAAACACAATCCTCGGCTGCTGTAGTCTTCC
TGCTAATACGATTTGTGTTGTTTGTGTATTGAACTTTTGTAGAGTCACAG
TTGTCTGACGCGTTTCGTGTGCTTCCCGTTCGTTCTCTTTTTTTGTCTCG
ACCCCATGTTTTTTTTTTTGCCGTGTTTTCAGTGCCCGGGATTAGCGCAA
CGCCGTACGAAGACAACCTGCGTTACTTTAGTGTCGTCATCACGGGCCCG
GAGCAGTCCCCGTACGAAAGTAAGTTTTCACAAACTTGAGTGTTGCGGGG
TTAAGTGTTGTTTTTGTCACAATTCAGCGTATGTTCGATACTTGATGCTT
TAATGTAGACACCGGCAATGGTTCATAGTAGTACAGTTGAAGCATATATT
TCTACCCCCATCCTCACCCAGTGTTTTTTTTATTACTTGTTGAGTAACTC
GTGGAGTCGTGCAGTGGGCAGCAGATTGATATTTTGGGTGTAGCGCTGGA
CTTGCGAGGATGCATAGGATAACGTACCTCTCCACCGTAACAGGGTTTGC
TAAACCCATTCAAGCTAGTGAATCCGTTGTGCAGATATGATACACACGTG
AACTTGGTTGACACAGTAGTAGACGTTGATTTGGGTGCTAGGGTAAAAAA
ATGCCTTCCGTTTTTTAGAAAACTCGGATTGTTGTCAGTCATGATGCGTC
ATTAATGAACGACGGAGTACAAATCCTGTCTGATGAGGCATGAGGCCCCG
CGCCTGTCTACAGGTGCCTCGACGTTGGTATCAGCCGGTCCTTCCCCAAG
GGGGGAAAAACGCAGAGAAAATTCCAGTAGCGGGGTATGGGGCATGTTTT
TTCAACGAGAAAAAAATATGGGAGTTTTGGGAGTGTTCGACTGGCATAGG
TTTGGGGTTTTGTATAAAGTCGGGTTCATCGCTGATGTTAAGTTGAGGGT
GTGGTGCTTGGGTGTATGCTGTATATGTGGTGTGTGTTCCGTATGATACC
CCGGGGTATGACACTTCCAGTGTGTTGTTCTATCATGTCGTGTGAGCCAA
GGTTGTGTATACGGTTGTCTCAATACAAATCGACTGCCCCGAAGGCTACC
CTCTCTTTGCAACCGACCATATCGCATTTTGCGCGTTTCTCGCCTCCCCC
CCCCCTCCCTACTTCGTTTGCTTCTCCTCCCTCTAAAAACTGTTTATGGC
AAGTATAGATGGATCTTTCAAGCTTGAGCTGTTCCTGCCGTCAGACTACC
CAATGGCTCCTCCTAAGGTGTGTTGTACTAAAGTGGGCCTCGCTTTTTTT
ATCTGGTTAGGCTGGGACAAATATTTGTGCTGCAAGTATCCTTTCGTAAA
CTCTATATATTGCCCGGAGCCAGAATCAATTTTGACGTGTTTTTTTTTTT
CACACATACGACGAGGGATAATCCATGTAATTTATCCTGTGAGCTAATCG
ACCTTGGTCGAAGAGTTCACACCATGATAGTTGTAACACCCCAAAGCAAA
TATTTTTTATGAGCGAACTCCATCAGGAGAACATTGGCATACCGTGCATA
TCATATATAAAACTTTGTTTTGGCTGTGTGTGGCGCGATGTTTTTTTACA
AGCGCGTTAGGATCAAATTCCCTTGCGGTTGGCGTAGAAGCCCAAGGGTC
AATCGTAGTCTGGCTCTCGAAAACCGGGCGTCCTCCTTCTCGGCTTTGTA
GGAATGCATTGTCAATAGTCGAGAAACTTCGGCATGCGTTTTTATCAGTA
CACCCGCCGCCCCCGCCCCGCCCGCGCCTCATACCCCATTTGGTTGAAGT
AATGTTGGTAATAGTAGTTTTGCCAAATATGAGGTTTTGTCATGTTCCAT
CCTTCAGTAAGGAGCAGCACACATACTACCTAGGATTTTTTTTTTTTTCT
TGCACCGAAACCGAATTCGACGAAATAATTTGGAATACACAAGTGGGAGA
ATGATGCCTTGTTGTACTCGTTTTGTAATAAGCAGGTTCGTTTCCTGACG
AAGATCTACCACCCTAATATTGACAAGCTCGGGCGCATCTGTCTCGACAT
CTTGAAGGACAAGTGGTCGCCCGCGCTTCAGATCAGGACGGTGCTGCTCA
GTATCCAGGCAAGCGTTACTAATGGGAAGGAGCCCAACCAGCTTCAGTTC
CAAGAGGAATTGGTGGTCGCAGGAGCAGGAACAGTAGCTGTAGTAGTAGT
GGTAGTAGTAGTAGTAGTGGTGATGGGTATTTGTCCATTAGTGATCACGG
TAAATATCATGAGCATCGTTGCTTCGGAACTGTTATTTTGCTTTGTGCGT
AAGTAATTCTTCCCAATAAATTTTTCGTGCTAGTGTAACGAGCTATTACG
AGCCCAGTCGGTCGAAGACAAGCCTGGATCACACGGGCGGAGCCGTGGCT
CTGCTATTGGTATATATCTAAGGGATCTCCTGCGGCAGGGGATCACAGAG
CTGGGGCCGTGGGTGAAGTTTGGCGCCATACTAACACATGAGATGTTTTC
GGAGGAATTTGGCGTCGTCTACTGCAGCGGTTGCCAGTTTATCTGTTTTT
TCCAACATTTCGAACCGTTGTATCTCGGCAGATTTTGCGGTGGGGTTGCG
ACACGACCACCGAGTGTATGGGGAACGAGGAAGACCTGTCATACGAAAGA
TTGTCGCCGTTCCTATTCCAGGAATATAAAAGTAACTGTGGCTTGCATAT
AAGCATAATACAACACTCAAATTTCGTGTAAACTCACGTAGTCGTCGGCC
TCGTACATGAATCCCCGGCCCCCGACCAATAGGCGCTCCTCTCGGCCCCT
AATCCGGACGATCCACTGGCGAACGATGTGGCGGAGATTTGGAAGACGGA
CGAGGCGCAGGCTCTGCGGACAGGTGAGTTTCTATTTTATTTTTATTGCT
CAGACTGGTGGGAAATGTATGCTGTTGTGTTGTTTCGTTCGGTTGTAATC
GATTTCAATGGCCGGGGAAATGGACAACCGTACAGTGTTATATTTTGTAC
GCTTGTCAGGACTCATTTGGACGACCAAGACCGAGAACACGTGCGCCCCG
CACCTCACCCTATCTTTTATTTTGGAGGGTTATTTGTACCAGGAGCCATC
AAAACTCAGAGATGCCCTATCCCTTGGGTATTGTGGTTGATTTTCTCAAA
GTGGGTGTTTATTTTTGCCCACCACTGGGTGTACTTGCACGAGACCACAA
GGTTTTTACGTATGGTATTCGTTTTCAGGGGCTGCTGAACTGTTGTAAGG
TGGAGCTAAGATTTTTTTTCCAACGAAGTCTAGTTTGGAAGAGCATGTGT
GACTTGCTGGAACCAAACGGGCCCTGGTTCTGGTTTAGTTCATGTTGAAA
CGTCGTATGTAATTCCTAATCATCAATCACGTGGAAAGTCCTTACTTGTA
TATTCATCTATATATATATATATATATATATATGGCTACATAAGTGACCT
GACCGTAGATGTGGAGTTCTCATGAAACTGCTATATTTTGAGGTGATGGG
AACACTCATGTTTATCCACCCTTGATCTAGGGTCACGAGTTGTAATGCGC
TTGTTGGTGCTTTTATCAACCTATGCCCCACTCCCCACGTAACCGTGTGA
TCGCTACGACACATAGCATGCTTCGATATGCATCTTGTGCACAAATTGCC
CCTATAAAAGTCACATGTATGCGACAAAGTTTGGATTTTCTAGCAGCCGA
AAAAGGGGAGATCAAAGATATTTATTACAGAAGCCATTTGTTGGTTTCTC
GTTTCACGTGTCAGTTTTCCAAACATGATGCGTGAAATGGGTTCTGATGC
CGTTTTTCGACAGCTGCACCAACAACCGTCGACATCAGCGTTTCCTGTAC
ATCGTGCTCTCGCGTCCATCCCGTATGTCGAGTTTCCCAGCTTTTTTGCT
TGAAAAGCCATGTGTACCCTACGCTACCCGGTTCAGTTCGCGTGTATTGT
GTCTCGACCGACGCACAAAGGATCACAGCGCCCCCACGAAGATTCGTTTC
TTAGTAATTAGTTGAATATTGACCTCTAAAATGTCCCGAACCGACGACGA
CGACCTTAACGTAGTAATGTACCTGGTAGTTAACAATCGATACACCCATT
ACCAATTTCTCGAGAATGACTCCTTCACGATGTATCGGAAGAGCATGTGA
TTCGACACATGTCTCGATGAGATCTTGCCAGTATTGATTGGTTTGCCAGT
CGACGTATGGTAAAAGGCTCCGCCCCGTCGTTACGGCAGCCAAGGTCTCT
TAGACCTTATATATGGTCGATGATGTGATGATTGGGTCAGACGTAAAGAG
TATAAGGACGCTCAGGGAGGAAGGTCGCATGGGAATAGTACCCGGTACAG
CAAATATGCCATACATGAATGGACGCATACGCCCCCTGGATCATAATCTT
GATAATCCCAAGCCACGTGATGCCACACTAGACCACGTCGACCGTACCCG
AAGCACGACAATGAACACCCAGCAACGAAACATTCGGTGTCGAGAGCCCT
ATATCTTCCAAGAAAATCATTGTTGAAGTTGTGTACCTCTGCTTCTCGCA
CATGTACAGCACGGGAGTGGACTCAGAGGTTGGCGCGGGCATCGGCGTGA
GATCGTCGCCAACTCAAAAAGGGGGGCTAGGAGGGGGATGATGGCGGGGT
GCGGCAGTCGAAAGCCGACAACAAGAAACATGCTGCCATACTTGTAGTAG
CGGTCATGCTTGTTTTTTTCTGGCGTGGAGATATGGGCTTGATCGAGGCG
GAGGAGGAGGATGTAAGCTAGCAGAAGTTACGACTTTCGGAATCCATCAC
CCCGAAGAGGTTTTACGAGAGGGTGCGCGAGGCAGATGGGGGTGGGTAGG
TAGGTTGGAGTTGGATAGGGGGGTATGGGAAGTCAAGACAACAATACGAT
CACGTCGTACTGTGGGAGAAAAGCGTGGTCGGGAGAGAAAGAGCGTGAAT
GACGGTGAAATGATGGGGAAGAGCCTCTGGCGTGGAACAGAAGTGACTGA
GTATTTGACCGGCCTGCTCGAGGGTGGTCTGTTTCTGGCGGGGGGAGGGG
GGGGAGGATGTGGTGGCTGGATGAGGCGCTGTACGTCGGGATATCTCCCT
TGACCCCTGCCCTGCCAGCGCTTCGACATGGTCGCCTCGATTGTTTTTAT
CATTTTCATGCTTTCTCTTCGATGATTCGTGGTCTGTGTAGTTTGGTGAT
AAACATAGCGCGAGGTGTTCTATTCGGTAGCCCATGCTTGAGTGGAATGG
CCTCGAATATTCAAATATTTGGTTTGATCTGTAGCTCGGGTGGGCGGGGA
GGGGGCGGGGGGCGAAGGGGGGCATGTTCGTACATAGCATTTTAAGTGGT
ACCTTTTGTTGTTTTTTCCATCACTCCCATTTGTGCAGTAATTCAAAAAG
AAAGGAAATGCCCAAGGGGAGGGAGGGGGGGCGAGAGATTGGCTTTTCAA
GATCCTCGTGGAGTGTTGGAAGTATGGGTGGACCCTAAGTATCATTAGTC
TCTTTGCTGAAGAGCACGTGGGTATATGGGATTTTGGTTATGAGAGCTCT
GAGTGCTGAGTAATGATTGGTTTGTACCTACGCTGTGGTGTTTTGTGAAT
TTTGTTGCGATCTTGCTTCCTGTTTTTCACCCGCGGCGGTGATGGCGGCA
GCAGCAGGAATATATTAATTCTGTATTTGTGATGCACGGAATATTACATG
AACGAAAAGGTTTTTGAACTTGAAACAAGTCATAATGTCATGTATCTTTT
TTTTATTCTGTTTCTTTGCCATCTGTATGGCCTATTGTGCTAGTGTGTCC
TTTTCTCTATTTTGTGAATCTTGAAGCGCATCCCGAGAGATGAACTTGAA
GGTGTCGTTAAGCCATATTGTTGTATTACTGATGTTCTTGCTTTCCCTTT
CCTCGTTTTCCTACTTTCGACCGCGTCCGCTCTGCGGGAGTCGACAATTA
AACAAGAGGCGATCTATGAACTCGCAATGACTCCAA back to topCoding sequence (CDS) from alignment at H-paniculata_contig10779:889..8274- >mRNA_H-paniculata_contig10779.491.1 ID=mRNA_H-paniculata_contig10779.491.1|Name=mRNA_H-paniculata_contig10779.491.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=942bp|location=Sequence derived from alignment at H-paniculata_contig10779:889..8274- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGGCTAGTAATCTTCCCAGGAGGATCGTCAAAGAGACGCAACGGCT
ACTGCTCGAGCCAGATGGCGGCTAGTAATCTTCCCAGGAGGATCGTCAAA
GAGACGCAACGGCTACTGCTCGAGCCAGTGCCCGGGATTAGCGCAACGCC
GTACGAAGACAACCTGCGTTACTTTAGTGTCGTCATCACGGGCCCGGAGC
AGTCCCCGTACGAAATGCCCGGGATTAGCGCAACGCCGTACGAAGACAAC
CTGCGTTACTTTAGTGTCGTCATCACGGGCCCGGAGCAGTCCCCGTACGA
AAATGGATCTTTCAAGCTTGAGCTGTTCCTGCCGTCAGACTACCCAATGG
CTCCTCCTAAGATGGATCTTTCAAGCTTGAGCTGTTCCTGCCGTCAGACT
ACCCAATGGCTCCTCCTAAGGTTCGTTTCCTGACGAAGATCTACCACCCT
AATATTGACAAGCTCGGGCGCATCTGTCTCGACATCTTGAAGGACAAGTG
GTCGCCCGCGCTTCAGATCAGGACGGTGCTGCTCAGTATCCAGGCAAGCG
TTCGTTTCCTGACGAAGATCTACCACCCTAATATTGACAAGCTCGGGCGC
ATCTGTCTCGACATCTTGAAGGACAAGTGGTCGCCCGCGCTTCAGATCAG
GACGGTGCTGCTCAGTATCCAGGCAAGCGCGCTCCTCTCGGCCCCTAATC
CGGACGATCCACTGGCGAACGATGTGGCGGAGATTTGGAAGACGGACGAG
GCGCAGGCTCTGCGGACAGGCGCTCCTCTCGGCCCCTAATCCGGACGATC
CACTGGCGAACGATGTGGCGGAGATTTGGAAGACGGACGAGGCGCAGGCT
CTGCGGACAGCACGGGAGTGGACTCAGAGGTTGGCGCGGGCATCGGCGTG
ACACGGGAGTGGACTCAGAGGTTGGCGCGGGCATCGGCGTGA back to top
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