mRNA_H-paniculata_contig10774.489.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10774.489.1 vs. uniprot
Match: D7FM35_ECTSI (tRNA-dihydrouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM35_ECTSI) HSP 1 Score: 376 bits (966), Expect = 5.970e-121 Identity = 183/227 (80.62%), Postives = 197/227 (86.78%), Query Frame = 1 Query: 1 DRYEELTGFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGIDNLGSVNDHILGRGEWGGYGGGVAGVMVGRACYFDPWTFRHTDSAVFGSPDPGLTRREIMEHCVDTFQEYMQEGQREGPERNRTRYHCLGTVLKPLGYLSSGARGSRKFRQELGRAVQVQSKIDPDADIFRDVVEAAMELMEPEILDEPVGDTPDAALGA 681 D Y+ELT FVRAVKAAG+DHV+VHARKCLL GLSTSANRT+PPLRYDVVHRLA EFPELEIVLNGGID+LG+VN+HI G GEWG YGGGVAGVMVGRA YFDPWTFRHTDSAVFGS DPG TRREIME CVD F E MQEG+REGPE NRTR+ CLGTV KPLGYLSSGARGSR FRQEL RAVQ QSKIDPD D FRD V+ AM L+ +LDEPVGDTP+ A G+ Sbjct: 148 DSYDELTTFVRAVKAAGIDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHITGTGEWGEYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKIDPDTDDFRDAVDRAMALLPEGVLDEPVGDTPECAFGS 374
BLAST of mRNA_H-paniculata_contig10774.489.1 vs. uniprot
Match: G4ZWL3_PHYSP (Dus domain-containing protein n=25 Tax=Peronosporaceae TaxID=4777 RepID=G4ZWL3_PHYSP) HSP 1 Score: 147 bits (370), Expect = 7.220e-35 Identity = 86/220 (39.09%), Postives = 125/220 (56.82%), Query Frame = 1 Query: 1 DRYEELTGFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGIDNLGSVNDHILGRGEWGGYGGGVAGVMVGRACYFDPWTFRHTDSAVFGSP-DPGLTRREIMEHCVDTFQEYMQEGQREGPERNRTRYHCLGTVLKPLGYLSSGARGSRKFRQELGRAVQVQSKIDPDADIFRDVVEAAMELMEPEILDEPVGD 657 D YEEL +V +V AGV H+IVHARKCLL GLST NRT+PPLRYDVV+RL +FPEL LNGG+ ++ + + V GVM+GRA Y PW FR D +F + +P L+RREI+ +D + + P + ++KPL L +G G + F++E+ +K P ++ R+++E+AM+++ E+LD V D Sbjct: 159 DSYEELHHYVSSVTEAGVRHIIVHARKCLLKGLSTKDNRTIPPLRYDVVYRLKQDFPELSFTLNGGVQSIQHARELLDTT--------NVDGVMIGRAAYNTPWNFRDADRLIFNAERNPNLSRREIIARYLDYAEGLQAKWGSTEPLSDSPYTMATSALMKPLLSLFNGEFGGKAFKREISAQ---WAKKGPRPEL-REMIESAMKVLPDEVLDARVED 366
BLAST of mRNA_H-paniculata_contig10774.489.1 vs. uniprot
Match: H3GP67_PHYRM (Dus domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GP67_PHYRM) HSP 1 Score: 145 bits (367), Expect = 1.150e-34 Identity = 85/220 (38.64%), Postives = 125/220 (56.82%), Query Frame = 1 Query: 1 DRYEELTGFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGIDNLGSVNDHILGRGEWGGYGGGVAGVMVGRACYFDPWTFRHTDSAVFGSP-DPGLTRREIMEHCVDTFQEYMQEGQREGPERNRTRYHCLGTVLKPLGYLSSGARGSRKFRQELGRAVQVQSKIDPDADIFRDVVEAAMELMEPEILDEPVGD 657 D YEEL FV V +AGV H+IVHARKC+L GLST NRT+PPLRYDVV++L +FPEL LNGG+ ++ + + V GVM+GRA Y PW FR D +F + +P L+RREI+E ++ + + P + ++KPL L +G G + F++E+ +K P ++ R+++E AM+++ E+LD V D Sbjct: 131 DSYEELHHFVATVASAGVRHIIVHARKCILKGLSTKDNRTIPPLRYDVVYQLKQDFPELSFTLNGGVQSIQHARELLDTT--------NVDGVMIGRAAYNTPWNFRDADRLIFNAERNPNLSRREIIERYLEYAENLQAKWGSTVPLGDSPYTMATSALMKPLLALFNGEIGGKAFKREISAQ---WAKKGPRPEL-REMIENAMKVLPDEVLDARVED 338
BLAST of mRNA_H-paniculata_contig10774.489.1 vs. uniprot
Match: A0A484ECZ8_BRELC (Dus domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ECZ8_BRELC) HSP 1 Score: 144 bits (364), Expect = 4.870e-34 Identity = 83/220 (37.73%), Postives = 125/220 (56.82%), Query Frame = 1 Query: 1 DRYEELTGFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGIDNLGSVNDHILGRGEWGGYGGGVAGVMVGRACYFDPWTFRHTDSAVFGSP-DPGLTRREIMEHCVDTFQEYMQEGQREGPERNRTRYHCLGTVLKPLGYLSSGARGSRKFRQELGRAVQVQSKIDPDADIFRDVVEAAMELMEPEILDEPVGD 657 D YEEL FV +AGV H IVHARKCLL GLST NRT+PPLRYDVV+RL +FP+L LNGG+ ++ + + G+M+GRA Y +PW FR D +F + +P L+RREI+E ++ +E ++ P ++KPL L +G G + F++E+ +K P ++ R+++E A++++ ++LDE V D Sbjct: 164 DSYEELHYFVATAASAGVRHFIVHARKCLLKGLSTKENRTIPPLRYDVVYRLKQDFPDLSFTLNGGVQSIQHARELLNTT--------NADGIMIGRAAYNNPWNFRDADRLIFDADRNPNLSRREIIERYLNYAEELQEKWGSNEPLSGSPYTMATSMLMKPLLSLFNGEFGGKAFKREVSAQ---WAKKGPRPEL-REMIENAIKVLPDKVLDERVED 371
BLAST of mRNA_H-paniculata_contig10774.489.1 vs. uniprot
Match: A0A8K1CQW7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQW7_PYTOL) HSP 1 Score: 143 bits (360), Expect = 9.130e-34 Identity = 91/223 (40.81%), Postives = 131/223 (58.74%), Query Frame = 1 Query: 1 DRYEELTGFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGIDNLGSVNDHILGRGEWGGYGGGVAGVMVGRACYFDPWTFRHTDSAVFG-SPDPGLTRREIMEHCVDTFQEYMQEGQREGPERNRTRYHCLGT--VLKPLGYLSSGARGSRKFRQELGRAVQVQ-SKIDPDADIFRDVVEAAMELMEPEILDEPVGD 657 D YEEL F+ V +AGV H IVHARKCLLNGLST NRT+PPL+YD V+RL +FPEL LNGG+ ++ + + Y + GVM+GRA Y PW FR D +FG + +P L+RREI+ +D ++ + P + +C+ T ++KPL L SGA G + F+ RA+ Q ++ P +I R+++E A+ ++ E+LD V D Sbjct: 139 DSYEELHHFITTVASAGVTHFIVHARKCLLNGLSTHENRTIPPLKYDWVYRLKEDFPELFFTLNGGVQSIQHAKELLDTT-----Y---IDGVMIGRAAYNTPWNFRDADRLIFGEASNPNLSRREIIADYLDYAEDMQTKWGVTEPITDVP--YCMPTSALMKPLLALFSGAAGGKAFK----RAISAQFAQRGPKPEI-RELIETALAVVPDEVLDLRVED 346
BLAST of mRNA_H-paniculata_contig10774.489.1 vs. uniprot
Match: M4BKI6_HYAAE (Dus domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BKI6_HYAAE) HSP 1 Score: 139 bits (351), Expect = 2.110e-33 Identity = 84/221 (38.01%), Postives = 124/221 (56.11%), Query Frame = 1 Query: 1 DRYEELTGFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGIDNLGSVNDHILGRGEWGGYGGGVAGVMVGRACYFDPWTFRHTDSAVFGSP-DPGLTRREIMEHCVDTFQEYMQEGQREGPERNRTRYHCLGTVLKPLGYLSSGARGSRKFRQELGRAVQVQ-SKIDPDADIFRDVVEAAMELMEPEILDEPVGD 657 D YEEL ++ +V AGV H IVHARKC L GLST NRT+PPLRY+VV++L +FPEL LNGG+ ++ + + V GVM+GRA Y PW FR D +F + +P L+RREI+E + ++ + P +LKPL L +G G + F+ R++ Q ++ P A++ RD++E A++++ E+LD V D Sbjct: 44 DSYEELHHYIASVARAGVRHFIVHARKCFLKGLSTKDNRTIPPLRYEVVYQLKQDFPELLFTLNGGVQSIQHARELLDTT--------NVDGVMIGRAAYNTPWNFRDADRLIFSAERNPNLSRREIIERYLTYAEDLQSKWGSTKPLSESPYTMATSALLKPLLALFNGEIGGKAFK----RSISAQWARKGPRAEL-RDMIENAVKVLPDEVLDARVED 251
BLAST of mRNA_H-paniculata_contig10774.489.1 vs. uniprot
Match: A0A0P1AFC1_PLAHL (Dus-domain-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AFC1_PLAHL) HSP 1 Score: 142 bits (359), Expect = 2.260e-33 Identity = 84/220 (38.18%), Postives = 122/220 (55.45%), Query Frame = 1 Query: 1 DRYEELTGFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGIDNLGSVNDHILGRGEWGGYGGGVAGVMVGRACYFDPWTFRHTDSAVFGSP-DPGLTRREIMEHCVDTFQEYMQEGQREGPERNRTRYHCLGTVLKPLGYLSSGARGSRKFRQELGRAVQVQSKIDPDADIFRDVVEAAMELMEPEILDEPVGD 657 D YEEL +V V +AGV H+IVHARKCLL GLS NRTVPPLRYDVV+RL +FPEL LNGG+ ++ + + V G+M+GRA Y PW FR D +F + +P L+RREI++ ++ + + P ++KPL L +G G + F++E+ A + P+ R++VE A++++ E+LD V D Sbjct: 156 DSYEELHHYVTMVASAGVRHIIVHARKCLLKGLSPKENRTVPPLRYDVVYRLKQDFPELYFTLNGGVQSIQHARELLNST--------NVDGIMIGRAAYNSPWNFRDADRLIFNADRNPNLSRREIIQKYLEYAENLQDKWGSSKPLSELPYTMATSALMKPLLTLFNGEIGGKAFKREIS-AQWARKGQRPE---LREMVENALKVIPVEVLDARVED 363
BLAST of mRNA_H-paniculata_contig10774.489.1 vs. uniprot
Match: A0A5D6XXI5_9STRA (Dus domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXI5_9STRA) HSP 1 Score: 141 bits (356), Expect = 4.030e-33 Identity = 92/227 (40.53%), Postives = 126/227 (55.51%), Query Frame = 1 Query: 1 DRYEELTGFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGIDNLGSVNDHILGRGEWGGYGGGVAGVMVGRACYFDPWTFRHTDSAVFGSP-DPGLTRREIMEHCVDTFQEYMQEGQRE-------GPERNRTRYHCLGTVLKPLGYLSSGARGSRKFRQELGRAVQVQSKIDPDADIFRDVVEAAMELMEPEILDEPVGD 657 D YEEL F+ V + GV H IVHARKC+L GLS NRTVPPL+Y+VV+RL +FPEL LNGG+ ++ +L + GVM+GRA Y PW FR D +FG +P L+RREI V + EY +E Q GP R R T++KPL L +G GS+ +++E+ + I P+ R++VE A++L+ E+LD V D Sbjct: 155 DSYEELHEFISTVASCGVQHFIVHARKCILKGLSPHENRTVPPLKYNVVYRLKTDFPELRFTLNGGVASIQDAKQ-LLDETN-------IDGVMIGRAAYNTPWNFRDADRLIFGEERNPNLSRREI----VAKYLEYAEELQATWGSTVPIGPLRYTMR---TSTLIKPLLALFNGEYGSKAYKREITAQWGKKGPI-PE---LREIVEEAVKLIPDEVLDARVED 362
BLAST of mRNA_H-paniculata_contig10774.489.1 vs. uniprot
Match: K3X2Z4_GLOUD (tRNA-dihydrouridine synthase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2Z4_GLOUD) HSP 1 Score: 140 bits (352), Expect = 1.350e-32 Identity = 85/223 (38.12%), Postives = 125/223 (56.05%), Query Frame = 1 Query: 1 DRYEELTGFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGIDNLGSVNDHILGRGEWGGYGGGVAGVMVGRACYFDPWTFRHTDSAVFGSP-DPGLTRREIMEHCVDTFQEYMQEGQREGPERNRTRYHCLGTVLKPLGYLSSGARGSRKFRQELGRAVQVQSKIDPDADIFRDVVEAAMELMEPEILDEPVGDTPD 666 D YEEL FV V ++GV H IVHARKC+L GLS NRTVPPL+YD V+RL +FP+L LNGG+ ++ + +L + GVM+GRA Y PW FR D +FG+ +P L+RREI+E +D + + P T++KPL L +G G + +++E+ S P ++ R+++E+AM+++ E+LD V D D Sbjct: 154 DSYEELHHFVTTVASSGVKHFIVHARKCILKGLSPHENRTVPPLKYDFVYRLKADFPDLLFTLNGGVASIQHAKE-LLDETN-------IDGVMIGRAAYNTPWNFRDADRLIFGAERNPNLSRREIVEKYLDYADDLQAKWGSTVPLGKLNYTMRTSTLMKPLLTLFNGEYGGKAYKREITAR---WSHKGPRPEL-REMIESAMKVLPDEVLDARVEDELD 364
BLAST of mRNA_H-paniculata_contig10774.489.1 vs. uniprot
Match: A0A2D4CBW8_PYTIN (tRNA-dihydrouridine synthase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBW8_PYTIN) HSP 1 Score: 140 bits (352), Expect = 1.430e-32 Identity = 79/220 (35.91%), Postives = 121/220 (55.00%), Query Frame = 1 Query: 1 DRYEELTGFVRAVKAAGVDHVIVHARKCLLNGLSTSANRTVPPLRYDVVHRLALEFPELEIVLNGGIDNLGSVNDHILGRGEWGGYGGGVAGVMVGRACYFDPWTFRHTDSAVFGSP-DPGLTRREIMEHCVDTFQEYMQEGQREGPERNRTRYHCLGTVLKPLGYLSSGARGSRKFRQELGRAVQVQSKIDPDADIFRDVVEAAMELMEPEILDEPVGD 657 D YEEL F+ V A+GV H +VHARKCLLNGLS NRT+PPLRYD V+RL +FP L LNGG+ ++ + + GVM+GRA Y+ PW FR D +FG +P L+RREI+ +D ++ ++ P + ++KPL L +G G + F++ + +S P+ R+++E A++++ ++LD + D Sbjct: 151 DSYEELHHFIDTVAASGVRHFVVHARKCLLNGLSPHENRTIPPLRYDWVYRLKDDFPHLRFTLNGGVQSIQHAKQLLDAT--------RLDGVMIGRAAYYTPWNFRDADRLLFGEARNPNLSRREIIAQYLDYAEDLQRKWGATEPISEIPYHMPTSALMKPLLGLFAGESGGKAFKRAIAARFADKSLPKPE---IRELIEEAIKVVPDDVLDLRIED 359 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10774.489.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10774.489.1 >prot_H-paniculata_contig10774.489.1 ID=prot_H-paniculata_contig10774.489.1|Name=mRNA_H-paniculata_contig10774.489.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=137bp MVGRACYFDPWTFRHTDSAVFGSPDPGLTRREIMEHCVDTFQEYMQEGQRback to top mRNA from alignment at H-paniculata_contig10774:231..4599+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10774.489.1 ID=mRNA_H-paniculata_contig10774.489.1|Name=mRNA_H-paniculata_contig10774.489.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4369bp|location=Sequence derived from alignment at H-paniculata_contig10774:231..4599+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10774:231..4599+ >mRNA_H-paniculata_contig10774.489.1 ID=mRNA_H-paniculata_contig10774.489.1|Name=mRNA_H-paniculata_contig10774.489.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=822bp|location=Sequence derived from alignment at H-paniculata_contig10774:231..4599+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |