mRNA_H-paniculata_contig10765.484.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10765.484.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 197 bits (501), Expect = 3.570e-52 Identity = 110/252 (43.65%), Postives = 149/252 (59.13%), Query Frame = 1 Query: 1168 GATRVQQWITFSLSFHHKKKCVDFILDHISRNRRTFTTGFTTIHIEEA*PYVLRGKEKVRMFPRE*NVGSIKVQHKSHIPKVMFICTVSRPDPEHDFDRKIGIWRVCTVREAQRT-------TARRARG----------------DMYEVDVTIDAEWYRELYVNDLLAEAK-KMWWLEGEELIAQQDGATPHTGKDSPQALNNAGMEAGLSVKLVTKPAQSPDLNMKDLGLFASLKSRGCGERYGKVDDLL 1851 GA + I SLS K+ +DFI D + + +H++E+ Y++R KEKVR+F E G +V H+SH+PK+M I +RPDP HDFD KIGIWR+C + AQR+ TA R + YE D TIDAEWY++ Y++ LL K KM WL + ++ QQDGA+PHTGK +P+ LN+AG+ G V+LVT+PAQSPDLN+ DLG FASLK R G +D+L+ Sbjct: 113 GAAKKAGRIKPSLSDAQKRHRMDFISDRVDEPIGEYLDQGNVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_H-paniculata_contig10765.484.1 vs. uniprot
Match: A0A484KKG0_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta campestris TaxID=132261 RepID=A0A484KKG0_9ASTE) HSP 1 Score: 104 bits (259), Expect = 5.900e-21 Identity = 73/223 (32.74%), Postives = 114/223 (51.12%), Query Frame = 1 Query: 1393 KSHIPKVMFICTVSRP--DPEHD--FDRKIGIWRVCTVREAQRTTARRARGDMYEVDVT-IDAEWYRELYVNDLLAEAK-KMWWLEGEELIAQQDGATPHTGKDSPQALNNAGMEAGLSVKLVTKPAQSPDLNMKDLGLFASLKSRGCGERYGKVDDLL*KEHVRRLRFRHV*ESYGHSMFKRYN-----------QVLRTMGGNDFEVEHIGTQERQREKGL 2010 K+HIPK+M +C V RP PE + +D K+GIW + AQR + RA G + + I E YR L + +L K K+ + +I QQD A PH + P+ + A + G S++L +P SPDLN+ DLG FAS++S VD+L+ +HV ++Y + K+ N ++++ GGN++++ HIG +RE L Sbjct: 24 KAHIPKLMHLCAVGRPIFGPEGEVIWDGKVGIWPLTIQVPAQRRSKNRAAGTLETKPIPRITKEVYRTLMIQQVLPAIKEKVPEAITKHIIIQQDNAKPHIDVNDPEFVQVANAD-GYSIELTCQPPNSPDLNILDLGFFASIQSLQHQTSTRNVDELV----------QHVAQAYANLEAKKLNYVWISYQLAMTEIMKVQGGNNYKLAHIGKARLEREGAL 235
BLAST of mRNA_H-paniculata_contig10765.484.1 vs. uniprot
Match: A0A5D6XR23_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR23_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.360e-20 Identity = 64/181 (35.36%), Postives = 96/181 (53.04%), Query Frame = 1 Query: 1285 FTTIHIEEA*PYVLRGKEKVRMFPRE*NVGSIKVQHKSHIPKVMFICTVSRP--DPEH--DFDRKIGIWRVCTVREAQRTTARRARGDMYEVDVTIDAEWYRELYVNDLLAEAKKMW--WLEGEELIAQQDGATPHTGKDSPQALNNAGMEAGLSVKLVTKPAQSPDLNMKDLGLFASLKS 1809 F +HI+E V + K +V + P E N QHKSH+PK+MF+C ++RP DP FDR IGIW A R+++ R G + + + E Y+ + + +++ W W G ++ Q+D A PH S L + GLS+ + +P QSPDLNM DLG F++L+S Sbjct: 25 FDRVHIDEKWFVVNKTKRRVYLTPTEPNPQR-HAQHKSHLPKLMFLCAITRPRVDPATGASFDRGIGIWPFAEEIPAYRSSSNRQAGTLETKPLPANKETYKAMIMTEVVPAVVSKWPAW-GGRHIVLQRDNANPHRVVTSAD-LTATMVTTGLSIMVECQPPQSPDLNMLDLGFFSALQS 202
BLAST of mRNA_H-paniculata_contig10765.484.1 vs. uniprot
Match: A0A6A4Z9D8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z9D8_9STRA) HSP 1 Score: 103 bits (258), Expect = 3.600e-20 Identity = 82/281 (29.18%), Postives = 139/281 (49.47%), Query Frame = 1 Query: 1204 LSFHHKKKCVDFILDHI---SRNRRTFTTGFTTIHIEEA*PYVLRGKEKVRMFPRE*NVGSIKVQHKSHIPKVMFICTVSRP--DPEHD--FDRKIGIWRVCTVREAQRTTARRARGDMYEVDVTIDAEWYRELYVNDLLAEAKKMWWLEGEELI-AQQDGATPHTGKDSPQALNNAGMEAGLSVKLVTKPAQSPDLNMKDLGLFASLKSRGCGERYGKVDDLL*K--EHVRRLRFRHV*ESYGHSMFKRYNQVLRTMGGNDFEVEHIGTQERQREKGLVK 2016 L+ HK + F+ H+ + +R + T+HI+E YV + + ++ E V + K + K HI KVMF+ V+RP D + +D +IG+W R A R++ R RGD T+ + YR ++ ++ + W + I QQD A PH + P A+ AG + G ++ L ++PAQSPDLN+ DLG F +++S +DDL+ + L + +++ ++ K + + G NDF++ H Q++ GLVK Sbjct: 12 LTDKHKSDRMAFVQRHLRTGASGKRYWHDMLDTVHIDEKWFYVTKQNRRYYLWSDE-AVPTRKCRSKKHITKVMFLTAVARPRYDARNKRMWDGRIGMWPFVKTRPALRSSKNRKRGDDVTEPFTVTRDVYRSFLIDKVIPAVRSKWPSSKKNQIWIQQDNAKPHVSVNDP-AVVAAGRQGGWTISLCSQPAQSPDLNVLDLGYFNAIQSLQHQMATYTLDDLVVAVVKSFEELECTVLDKTF-MTLQKVMECIFKMGGDNDFKLPH------QKKHGLVK 283
BLAST of mRNA_H-paniculata_contig10765.484.1 vs. uniprot
Match: A0A6G0X8U9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8U9_9STRA) HSP 1 Score: 104 bits (259), Expect = 1.470e-19 Identity = 76/261 (29.12%), Postives = 129/261 (49.43%), Query Frame = 1 Query: 1228 CVDFILDHISRNRRTFTTGFTT------IHIEEA*PYVLRGKEKVRMFPRE*NVGSIKVQHKSHIPKVMFICTVSRPDPEHD----FDRKIGIWRVCTVREAQRTTARRARGDMYEVDVTIDAEWYRELYVNDLLAEAKKMWWLEGEELIAQQDGATPHTGKDSPQALNNAGMEAGLSVKLVTKPAQSPDLNMKDLGLFASLKSRGCGERYGKVDDLL*KEHVRRLRFRH-V*ESYGHSMFKRYNQVLRTMGGNDFEVEHI 1977 C+ F+ +S+ R+ F IH++E ++ + K + E + S +HKSHIPK+MF+ V RP +H FD K+GI+ A+R++ +A+G + T+ + Y + VN +L + + L QQDGA PH P+ + +A GL++KLVT+PA SPDLN+ DLG FA++++ + +D+ L H + +S S+ +R ++ G N ++EH+ Sbjct: 127 CLSFL--RLSKTTRSCPAAFKFHAMLDWIHLDEKWFFLDKDKRTFYLVKGE-ELPSRTARHKSHIPKLMFLTAVGRPQYDHGTSQYFDGKLGIFPFVIHGTAKRSSRHQAKGAPVLIPQTVTRDIYVDALVNHVLPAILTKFPSRWKTLYIQQDGARPHCTDGCPELVASAA-SFGLNIKLVTQPANSPDLNILDLGFFAAIQTLQYRKCPKTIDEFLDAVHESFHELKSDCLDSVWLSLHRRMATIIDHYGDNTMKLEHM 383
BLAST of mRNA_H-paniculata_contig10765.484.1 vs. uniprot
Match: A0A328DNN2_9ASTE (Uncharacterized protein n=1 Tax=Cuscuta australis TaxID=267555 RepID=A0A328DNN2_9ASTE) HSP 1 Score: 101 bits (252), Expect = 3.500e-19 Identity = 77/258 (29.84%), Postives = 130/258 (50.39%), Query Frame = 1 Query: 1291 TIHIEEA*PYVLRGKEKVRMFPRE*NVGSIKV-QHKSHIPKVMFICTVSRP--DPEHD--FDRKIGIWRVCTVREAQRTTARRARGDMY-EVDVTIDAEWYRELYVNDLLAEAK-KMWWLEGEELIAQQDGATPHTGKDSPQALNNAGMEAGLSVKLVTKPAQSPDLNMKDLGLFASLKSRGCGERYGKVDDLL*KEHVRRLRFRHV*ESYGHSMFKRYN-----------QVLRTMGGNDFEVEHIGTQERQREKGL 2010 TIH++E + K+ +R++ E + + K+HIPK+M +C + RP PE + +D K+GIW + AQR + RA G + ++ I E YR L + +L K K+ + +I QQD A PH + P+ + A + G S++L +P S DLN+ DLG FAS++S V++L+ +HV ++Y + K+ N ++++ GGN++++ HIG +RE L Sbjct: 106 TIHVDEK--WFEMSKQSLRVYKTEREREPHRTAKSKAHIPKLMHLCAIGRPIFGPEGEVIWDGKVGIWPLTIQVPAQRRSKNRAAGTLETKLIPRITKEVYRTLMIQQVLPTIKEKVPEAITKHIIIQQDNAKPHIDVNDPEFVQAANAD-GYSIELTCQPPNSLDLNILDLGFFASIQSLQHQTSTRNVNELV----------QHVAQAYANLEAKKLNYVWISYQLAMTEIMKVQGGNNYKLAHIGKARLEREGAL 350
BLAST of mRNA_H-paniculata_contig10765.484.1 vs. uniprot
Match: A0A024TAS5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TAS5_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 3.000e-17 Identity = 50/146 (34.25%), Postives = 82/146 (56.16%), Query Frame = 1 Query: 1384 VQHKSHIPKVMFICTVSRPDPEHDFDRKIGIWRVCTVREAQRTTARRARGDMYEVDVTIDAEWYRELYVNDLLAEAKKMW-W---LEGEELIAQQDGATPHTGKDSPQALNNAGMEAGLSVKLVTKPAQSPDLNMKDLGLFASLKS 1809 +Q KSHI KVMF+C V+RP + +D ++G W + A R++ R G V + + YR + V+ ++ K W W ++G ++ QQD A PH D + + A + G ++++ +PAQSPD+N+ DLG F S++S Sbjct: 21 LQSKSHITKVMFLCAVARP--RNGWDGRLGCWEIVERAAAVRSSHNRPAGTEVVKSVVVTKDVYRRILVDKVVPAIKSKWKWPVGVDGGAIVLQQDNARPHIAPDDAEFVT-ASEDGGWTIRIENQPAQSPDMNVLDLGFFNSIQS 163
BLAST of mRNA_H-paniculata_contig10765.484.1 vs. uniprot
Match: A0A6A4Z066_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z066_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 4.230e-17 Identity = 64/199 (32.16%), Postives = 96/199 (48.24%), Query Frame = 1 Query: 1393 KSHIPKVMFICTVSRPDPEHDFDRKIGIWRVCTVREAQRTTARRARGDMYEVDVTIDAEWYRELYVNDLLAEAKKMWWLEGEELIAQQDGATPHTGKDSPQALNNAGMEAGLSVKLVTKPAQSPDLNMKDLGLFASLKSRGCGERYGKVDDLL*KEHVRRLRFRHV*ESYGHSMFKRYNQVLRTM----GGNDFEVEHI 1977 K IPKVMF+C V RP FD KIGIW + A R + R G M V +D YR+ +N ++ K+ + + ++ Q D ATPH D AL + G + + +P SPDLN+ DLG FAS++S VDD++ + F + + ++F V+R + GGN F++ H+ Sbjct: 37 KRFIPKVMFLCAVGRPRQADGFDGKIGIWPFVSKTPAVRNSRNRPAGTMVTTLVNVDGATYRDYVLNKVVPAIKEKFPSVSKRVVLQHDNATPHRSIDDA-ALAQVSTD-GWTFVVRRQPPNSPDLNVLDLGFFASIQSLQYKVVSRSVDDVIASTL---MAFDMLNDEKLANVFLTLQAVMRLVLEHRGGNHFKLPHL 230
BLAST of mRNA_H-paniculata_contig10765.484.1 vs. uniprot
Match: A0A6A3KJZ0_9STRA (Uncharacterized protein n=4 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3KJZ0_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 2.030e-16 Identity = 69/265 (26.04%), Postives = 125/265 (47.17%), Query Frame = 1 Query: 1237 FILDHISRNRRTFTTGFTTIHIEEA*PYVLRGKEKVRMFPRE*NVGSIK-VQHKSHIPKVMFICTVSRPD----PEHDFDRKIGIWRVCTVREAQRTTARRARGDMYEVDVTIDAEWYRELYVNDLLAEAKKMWWLEGEELIAQQDGATPHTGKDSPQALNNAGMEAGLSVKLVTKPAQSPDLNMKDLGLFASLKSRGCGERYGKVDDLL*K--EHVRRLRFRHV*ESYGHSMFKRYNQVLRTMGGNDFEVEHIGTQERQREKGL 2010 F + HI R+ + T+H++E +V + + P E V + V+ + +I +VM + V+RP ++ FD K+G+W A+R++ RR G + +V++ Y ++ ++ +L + W ++ QQD A D PQ A G V+L +PA SPDLN DLGLF ++++R +D+L+ E L R + ++ S+ +Q ++ G N ++ H+ + +RE L Sbjct: 74 FCVSHIDRDTLLYADMLNTVHVDENIFHVTETTRRFLLLPGE--VAPTRCVKSRRYITRVMVLAAVARPRVDTVTQNYFDEKLGVWAFMEKAPAKRSSRRRPAGTLETKEVSVTKATYHDMLISRVLPSIEARWPNASGAVVIQQDNAPARIKPDDPQ-FTEAAACCGRHVELRFQPANSPDLNALDLGLFCAIQARQRKTIARTLDELIEAITESYWELPARTINAAF-ISLQDSMDQCIKQRGDNAYKPRHMKKAKLEREGRL 334
BLAST of mRNA_H-paniculata_contig10765.484.1 vs. uniprot
Match: A0A1R3I5M9_9ROSI (Uncharacterized protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3I5M9_9ROSI) HSP 1 Score: 94.0 bits (232), Expect = 2.210e-16 Identity = 78/279 (27.96%), Postives = 131/279 (46.95%), Query Frame = 1 Query: 1201 SLSFHHKKKCVDFILDHISRNRRTFTTGFTTIHIEEA*PYVLRGKEKVRMFPRE*NVGSIKVQHKSHIPKVMFICTVSRP--DPEHD--FDRKIGIWRVCTVREAQRTTARRARGDMYEVDVT-IDAEWYRELYVNDLLAEAKKMWWLEG--EELIAQQDGATPHTGKDSPQALNNAGMEAGLSVKLVTKPAQSPDLNMKDLGLFASLKSRGCGERYGK-VDDLL*KEHVRRLRFRHV*-ESYGHSMFKRYNQVLRTMGGNDFEVEHIGTQERQREKGL 2010 +L+F +K + F L + N TF + TIHI+E Y++R + P E + K+ IPKVMF+ V+RP D + F KIG++ + T A+R++ R G + +T ++ + + +N ++ ++ W + + QQD A PH D A E G +V L +PA SPDLN+ DLG F +++S K +DDL+ F V + + S+ ++++ G N +++ HI + RE L Sbjct: 142 NLTFENKIARLRFCLKMLESNDSTFKGMYDTIHIDEKWFYLIRKSVNYYLLPDE-EEPHRTCKSKNFIPKVMFLAAVARPRFDTAGNVLFSGKIGVFPLVTKEPAKRSSVNRHAGTLETKPITTVNKDVMKTFLINKVIPTIREKWPRDNMRSPIYIQQDNARPHVKFDDAD-FKKATKENGFNVILTNQPANSPDLNVLDLGFFCAIQSLQQQAAAPKTIDDLIMAVENSFEEFSPVDSDKFFLSLQTCMREIMKVKGCNKYKILHIKKDQLSREGRL 418 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10765.484.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10765.484.1 >prot_H-paniculata_contig10765.484.1 ID=prot_H-paniculata_contig10765.484.1|Name=mRNA_H-paniculata_contig10765.484.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp MFICTVSRPDPEHDFDRKIGIWRVCTVREAQRTTARRARGDMYEVDVTIDback to top mRNA from alignment at H-paniculata_contig10765:718..3708+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10765.484.1 ID=mRNA_H-paniculata_contig10765.484.1|Name=mRNA_H-paniculata_contig10765.484.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2991bp|location=Sequence derived from alignment at H-paniculata_contig10765:718..3708+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10765:718..3708+ >mRNA_H-paniculata_contig10765.484.1 ID=mRNA_H-paniculata_contig10765.484.1|Name=mRNA_H-paniculata_contig10765.484.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=882bp|location=Sequence derived from alignment at H-paniculata_contig10765:718..3708+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |