mRNA_H-paniculata_contig10761.482.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig10761.482.1
Unique NamemRNA_H-paniculata_contig10761.482.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig10761.482.1 vs. uniprot
Match: D7G0D7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0D7_ECTSI)

HSP 1 Score: 355 bits (910), Expect = 1.430e-119
Identity = 163/207 (78.74%), Postives = 188/207 (90.82%), Query Frame = 1
Query:    1 KVYEMGNRNLRQFMENGWLLADKTPCFYIYSQKMGDHTQTGVVAGVPVEDYALGIIKRHEKTQVKKENDRTRLTHMQNANAGPVFLTYRAEQGVDEIVKDIARGDPEVNFMAADGVEHCVWPVRDPVVVFSLQRAFEAVQSTYIADGHHRSASAFRVGEMKIKEAIQRGETITGEEPFNFFLAVLFPANQLLCMEYNRVVRDLAGFT 621
            +VYE GN+NL++F+ENGWL+ DKTPCFY+Y+QKMG+H QTG+VAGVPVEDYALG+IKRHEKTQVKKENDRTRLTH+QNANAGPVFLTYR  + VDEIV  + R +PEV F A DG EH VW VRDPV VF++QRAFE+V++TYIADGHHRSASAFRVGEMKIKEA+ RG+ +TGEEPFNFFLAVLFP+NQLLCMEYNRVVRDLAGF+
Sbjct:   65 QVYERGNQNLKKFLENGWLVPDKTPCFYVYAQKMGEHLQTGIVAGVPVEDYALGVIKRHEKTQVKKENDRTRLTHVQNANAGPVFLTYRTSETVDEIVGRMTRENPEVQFRAEDGTEHSVWAVRDPVDVFAIQRAFESVKTTYIADGHHRSASAFRVGEMKIKEAVARGDVVTGEEPFNFFLAVLFPSNQLLCMEYNRVVRDLAGFS 271          
BLAST of mRNA_H-paniculata_contig10761.482.1 vs. uniprot
Match: A0A836CBS0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBS0_9STRA)

HSP 1 Score: 297 bits (760), Expect = 5.370e-97
Identity = 142/206 (68.93%), Postives = 162/206 (78.64%), Query Frame = 1
Query:    4 VYEMGNRNLRQFMENGWLLADKTPCFYIYSQKMGDHTQTGVVAGVPVEDYALGIIKRHEKTQVKKENDRTRLTHMQNANAGPVFLTYRAEQGVDEIVKDIARGDPEVNFMAADGVEHCVWPVRDPVVVFSLQRAFEAVQSTYIADGHHRSASAFRVGEMKIKEAIQRGETITGEEPFNFFLAVLFPANQLLCMEYNRVVRDLAGFT 621
            VYE G  NL++F+  GWL  D TPC YIY+Q MGDH Q G+ AGVPVE+YA+G+IKRHEKTQVKKENDRTRLT++QNAN GPVFLTYR    V+ IV  +    PE  F+A DG+ H VWPVRDP +V  LQRAF AV  +YIADGHHRSASAFRVGEMKIKEAI RG+ ITGEEPF  FLAVLFPA++L  MEYNRVV+DL G T
Sbjct:   66 VYEKGRENLQEFIGAGWLRRDATPCLYIYAQIMGDHVQHGICAGVPVEEYAMGLIKRHEKTQVKKENDRTRLTYVQNANVGPVFLTYRDNAAVNSIVNQVIASPPETEFVADDGIGHKVWPVRDPYMVRDLQRAFAAVPCSYIADGHHRSASAFRVGEMKIKEAIARGDIITGEEPFTHFLAVLFPASELRIMEYNRVVKDLNGHT 271          
BLAST of mRNA_H-paniculata_contig10761.482.1 vs. uniprot
Match: W7TNQ3_9STRA (Uncharacterized conserved protein UCP033563 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNQ3_9STRA)

HSP 1 Score: 266 bits (679), Expect = 1.750e-84
Identity = 127/209 (60.77%), Postives = 158/209 (75.60%), Query Frame = 1
Query:    1 KVYEMGNRNLRQFMENGWLLADKTPCFYIYSQKMGDHTQTGVVAGVPVEDYALGIIKRHEKTQVKKENDRTRLTHMQNANAGPVFLTYRAEQGVDEIVKDIARGDP-EVNFMAAD-GVEHCVWPVRDPVVVFSLQRAFEAVQSTYIADGHHRSASAFRVGEMKIKEAIQRGETITGEEPFNFFLAVLFPANQLLCMEYNRVVRDLAGFT 621
            +VYE G +NL++F+  GWL  +  P +YIYSQ+MGDH Q G+     VE+YA G+IKRHEKTQVKKENDRTRLT+ QNAN GPVFL Y+    +DEIV+ +    P E +F+A D G+EH VW V D   V S++RAFE+++ +YIADGHHRSASAFRVGEMKIKEAI  G+ +TG+E F  FLAVLFPANQL  +EYNR+V+DL G T
Sbjct:   64 RVYERGAKNLKEFISRGWLRKEAAPAYYIYSQRMGDHIQHGICGACSVEEYATGVIKRHEKTQVKKENDRTRLTYTQNANVGPVFLMYKPHDALDEIVRTVTSTRPAETSFVADDDGIEHLVWLVNDEPTVSSIRRAFESIRFSYIADGHHRSASAFRVGEMKIKEAIAAGKNVTGDESFCLFLAVLFPANQLKILEYNRIVKDLNGLT 272          
BLAST of mRNA_H-paniculata_contig10761.482.1 vs. uniprot
Match: A0A7X7UD90_9DELT (DUF1015 domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7X7UD90_9DELT)

HSP 1 Score: 219 bits (558), Expect = 1.180e-66
Identity = 105/206 (50.97%), Postives = 141/206 (68.45%), Query Frame = 1
Query:    4 VYEMGNRNLRQFMENGWLLADKTPCFYIYSQKMGDHTQTGVVAGVPVEDYALGIIKRHEKTQVKKENDRTRLTHMQNANAGPVFLTYRAEQGVDEIVKDIARGDPEVNFMAADGVEHCVWPVRDPVVVFSLQRAFEAVQSTYIADGHHRSASAFRVGEMKIKEAIQRGETITGEEPFNFFLAVLFPANQLLCMEYNRVVRDLAGFT 621
            VYE    NLR+ ++ G L  D  PCFY+Y QKMGDH QTGV+A V V +Y   +IK+HE T+  KE+DRTR T + NAN GPVFLTYRA+  +DEI+    +  P+ +F+A DG+ H +W V DP  + +LQ+AF  + + Y+ADGHHRSASA RVG    +E  ++    TG E +N+F+AV+FP NQL  ++YNRVV+DL G T
Sbjct:   65 VYETAAANLRRLIDQGHLRRDPRPCFYLYRQKMGDHVQTGVLAAVSVAEYDADLIKKHEHTRKDKEDDRTRHTDICNANVGPVFLTYRADPQIDEIIARCQQSRPDFDFVADDGIGHTLWVVDDPATLAALQQAFIRIPALYVADGHHRSASAARVG----RERREKNPRHTGREAYNYFMAVVFPDNQLKILDYNRVVKDLHGLT 266          
BLAST of mRNA_H-paniculata_contig10761.482.1 vs. uniprot
Match: A0A7C5TW87_9BACT (DUF1015 domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A7C5TW87_9BACT)

HSP 1 Score: 211 bits (538), Expect = 1.130e-63
Identity = 104/209 (49.76%), Postives = 139/209 (66.51%), Query Frame = 1
Query:    1 KVYEMGNRNLRQFMENGWLLADKTPCFYIYSQKMGDHTQTGVVAGVPVEDYALGIIKRHEKTQVKKENDRTRLTHMQNANAGPVFLTYRAEQGVDEIVKDIARGDPEVNFMAADGVEHCVWPVRDPVVVFSLQRAFEAVQSTYIADGHHRSASAFRVGEMKIKEAIQRGETI--TGEEPFNFFLAVLFPANQLLCMEYNRVVRDLAGFT 621
            +VY  G  NLR+ ++ G L+ +  P +Y+Y Q+MGDH QTG+VAG  V++Y   +IK+HE T+  KE+DRTR     +AN GPVFL YRA   +D +VK +  G P  +F A DG+ H +W V DP  V +L+ AF A+   Y+ADGHHRSA+A RV       A +R      TGEEP+NFFL+V+FP +QLL ++YNRVVRDLAG T
Sbjct:   64 EVYAKGAENLRRLIDEGALIRENRPAYYLYRQRMGDHVQTGLVAGASVDEYEADLIKKHEHTRRAKEDDRTRHIEALDANTGPVFLAYRARPEIDALVKRLTAGTPTYDFTAPDGIAHTLWVVDDPGDVAALKEAFAAIPEMYVADGHHRSAAAVRV------RAARRAANPNHTGEEPYNFFLSVIFPHDQLLILDYNRVVRDLAGRT 266          
BLAST of mRNA_H-paniculata_contig10761.482.1 vs. uniprot
Match: A0A523TLS5_9BACT (DUF1015 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523TLS5_9BACT)

HSP 1 Score: 211 bits (537), Expect = 1.560e-63
Identity = 101/207 (48.79%), Postives = 141/207 (68.12%), Query Frame = 1
Query:    1 KVYEMGNRNLRQFMENGWLLADKTPCFYIYSQKMGDHTQTGVVAGVPVEDYALGIIKRHEKTQVKKENDRTRLTHMQNANAGPVFLTYRAEQGVDEIVKDIARGDPEVNFMAADGVEHCVWPVRDPVVVFSLQRAFEAVQSTYIADGHHRSASAFRVGEMKIKEAIQRGETITGEEPFNFFLAVLFPANQLLCMEYNRVVRDLAGFT 621
            +VYE    NL++ + +G ++ D+ PCFY+Y QKMG H Q G+VAG  V++Y  G+IK+HE T+  KE DR R   +  ANAGPVFLTYRA + VDEIV+ +  G+P  +F A DGV H  W V +  ++ +L+ AFE + + Y+ADGHHRSA+A RV E++ KEA       TG E +N+FL V+FP +Q+  M+YNRVV+DL G +
Sbjct:   64 EVYEKSAENLQKLISDGLMVRDEKPCFYVYQQKMGGHVQAGIVAGASVDEYRNGLIKKHEFTRPDKETDRARHVEILGANAGPVFLTYRASKKVDEIVEKVRAGEPVYDFTAEDGVGHTFWVVDEEEIITALENAFEEIPALYVADGHHRSAAASRVREIR-KEA---DPDHTGGEQYNYFLTVIFPDDQMQIMDYNRVVKDLGGMS 266          
BLAST of mRNA_H-paniculata_contig10761.482.1 vs. uniprot
Match: A0A7V0WX70_9BACT (DUF1015 domain-containing protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A7V0WX70_9BACT)

HSP 1 Score: 207 bits (527), Expect = 5.280e-62
Identity = 101/207 (48.79%), Postives = 133/207 (64.25%), Query Frame = 1
Query:    1 KVYEMGNRNLRQFMENGWLLADKTPCFYIYSQKMGDHTQTGVVAGVPVEDYALGIIKRHEKTQVKKENDRTRLTHMQNANAGPVFLTYRAEQGVDEIVKDIARGDPEVNFMAADGVEHCVWPVRDPVVVFSLQRAFEAVQSTYIADGHHRSASAFRVGEMKIKEAIQRGETITGEEPFNFFLAVLFPANQLLCMEYNRVVRDLAGFT 621
            +VY+    NL+     GWL+ D+  C Y+Y Q MGDH Q G+V    V+DY  G IK HE T+  KE DR R  +  NAN GPVFLTY A+ G+DEIV+ I   +PE +F AADGV H +W V +   + ++ R FE +  +Y+ADGHHRS SA  VGEM+ K   +     TG+E +N+FLAVLFP NQL  ++YNRVVR+L G +
Sbjct:   64 RVYQKAAENLQAMRLKGWLIQDQQECLYVYRQTMGDHEQYGLVVDAAVDDYLTGKIKIHELTREVKEKDRIRHVNYTNANTGPVFLTYHADNGIDEIVRKIVNTEPEYDFTAADGVRHTLWVVDNDTTIAAIIRKFERIPQSYVADGHHRSKSAAMVGEMRRKANPRH----TGKEEYNWFLAVLFPHNQLKIIDYNRVVRNLNGLS 266          
BLAST of mRNA_H-paniculata_contig10761.482.1 vs. uniprot
Match: A0A7V4U3A3_9BACT (DUF1015 domain-containing protein n=2 Tax=Calditrichaeota TaxID=1930617 RepID=A0A7V4U3A3_9BACT)

HSP 1 Score: 206 bits (524), Expect = 1.450e-61
Identity = 101/207 (48.79%), Postives = 135/207 (65.22%), Query Frame = 1
Query:    1 KVYEMGNRNLRQFMENGWLLADKTPCFYIYSQKMGDHTQTGVVAGVPVEDYALGIIKRHEKTQVKKENDRTRLTHMQNANAGPVFLTYRAEQGVDEIVKDIARGDPEVNFMAADGVEHCVWPVRDPVVVFSLQRAFEAVQSTYIADGHHRSASAFRVGEMKIKEAIQRGETITGEEPFNFFLAVLFPANQLLCMEYNRVVRDLAGFT 621
            +VYE G  NLR+  E G L  D  PCFY+Y Q MGDH Q G+VAG  VE+Y   +IK+HE T+ +KE+DR    +  NA  GPVFLTY+A+  +D I+  I + +PE +F A DG+ H +W V D   + +LQ AF  +   Y+ADGHHRSA+A RV +M+ K A       TG+E +NFFL V+FP NQ+  M+YNRVV+DL G +
Sbjct:   64 EVYEKGAENLRRLREEGVLRQDDKPCFYVYRQIMGDHEQIGLVAGASVEEYKKDLIKKHELTRAEKEDDRVNHVNHLNAQTGPVFLTYKAQSKIDAIINKIVQREPENDFTADDGIRHTLWVVDDEAEIKALQEAFAQLDCLYVADGHHRSAAAARVYDMR-KAA---NPNHTGQEEYNFFLTVIFPHNQMYIMDYNRVVKDLNGLS 266          
BLAST of mRNA_H-paniculata_contig10761.482.1 vs. uniprot
Match: A0A661X934_9BACT (DUF1015 domain-containing protein n=1 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A661X934_9BACT)

HSP 1 Score: 204 bits (520), Expect = 5.730e-61
Identity = 98/206 (47.57%), Postives = 131/206 (63.59%), Query Frame = 1
Query:    4 VYEMGNRNLRQFMENGWLLADKTPCFYIYSQKMGDHTQTGVVAGVPVEDYALGIIKRHEKTQVKKENDRTRLTHMQNANAGPVFLTYRAEQGVDEIVKDIARGDPEVNFMAADGVEHCVWPVRDPVVVFSLQRAFEAVQSTYIADGHHRSASAFRVGEMKIKEAIQRGETITGEEPFNFFLAVLFPANQLLCMEYNRVVRDLAGFT 621
            VY  G  NL + ++ G L+ D  PCFY+Y Q MGDH Q G+VAG  VEDY  GIIK+HE T+  KE DR +  +  NA  GPVFLTYRA++ +D ++  I +  P  +F A DG+ H  W V D   +  LQ  F  +   Y+ADGHHRSA+A RV +M+ K+        TGEE +N+FL V+FP NQ+  M+YNRVV+DL G++
Sbjct:   65 VYAKGKENLDRLIKEGVLIQDDKPCFYVYRQIMGDHVQIGLVAGASVEDYEQGIIKKHELTRADKEEDRVKHVNTLNAQTGPVFLTYRAQKDIDALINKIVQRKPVYDFTADDGIRHTFWVVDDDNEIKQLQDLFARLDYLYVADGHHRSAAATRVKQMRQKQ----NPNHTGEEEYNYFLTVIFPHNQMYIMDYNRVVKDLNGYS 266          
BLAST of mRNA_H-paniculata_contig10761.482.1 vs. uniprot
Match: A0A5B8XW79_9DELT (DUF1015 domain-containing protein n=1 Tax=Bradymonadales bacterium V1718 TaxID=2600177 RepID=A0A5B8XW79_9DELT)

HSP 1 Score: 202 bits (514), Expect = 4.090e-60
Identity = 96/207 (46.38%), Postives = 138/207 (66.67%), Query Frame = 1
Query:    1 KVYEMGNRNLRQFMENGWLLADKTPCFYIYSQKMGDHTQTGVVAGVPVEDYALGIIKRHEKTQVKKENDRTRLTHMQNANAGPVFLTYRAEQGVDEIVKDIARGDPEVNFMAADGVEHCVWPVRDPVVVFSLQRAFEAVQSTYIADGHHRSASAFRVGEMKIKEAIQRGETITGEEPFNFFLAVLFPANQLLCMEYNRVVRDLAGFT 621
            +VY    +NL   ++ G L  D+   FY+Y Q+M    QTG+VAG  V +Y  GIIK+HEKT+  KE+DRTR      AN GPVF+TYRA   +DEIV ++   +P+V+F+A D + H +W ++D   V +LQ AFE V + YIADGHHRSASA RV ++K  + +      TG+EP+N+F++V+FP +QL  ++YNR+V+DL G +
Sbjct:   64 QVYAQARQNLANMIDEGVLAFDQNETFYVYRQRMDGREQTGIVAGTSVAEYNEGIIKKHEKTRQGKEDDRTRHILETGANTGPVFMTYRASTAIDEIVDNVCAAEPDVDFVADDQIAHTIWVIKDESKVNALQSAFEKVPALYIADGHHRSASAARVAQIKRDQNLAH----TGDEPYNYFMSVIFPDSQLRILDYNRLVKDLNGLS 266          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10761.482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G0D7_ECTSI1.430e-11978.74Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CBS0_9STRA5.370e-9768.93Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TNQ3_9STRA1.750e-8460.77Uncharacterized conserved protein UCP033563 n=3 Ta... [more]
A0A7X7UD90_9DELT1.180e-6650.97DUF1015 domain-containing protein n=1 Tax=Myxococc... [more]
A0A7C5TW87_9BACT1.130e-6349.76DUF1015 domain-containing protein n=1 Tax=Acidobac... [more]
A0A523TLS5_9BACT1.560e-6348.79DUF1015 domain-containing protein n=1 Tax=Planctom... [more]
A0A7V0WX70_9BACT5.280e-6248.79DUF1015 domain-containing protein n=1 Tax=Candidat... [more]
A0A7V4U3A3_9BACT1.450e-6148.79DUF1015 domain-containing protein n=2 Tax=Calditri... [more]
A0A661X934_9BACT5.730e-6147.57DUF1015 domain-containing protein n=1 Tax=candidat... [more]
A0A5B8XW79_9DELT4.090e-6046.38DUF1015 domain-containing protein n=1 Tax=Bradymon... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10761contigH-paniculata_contig10761:410..6545 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score349.7
Seed ortholog evalue8.9e-94
Seed eggNOG ortholog2880.D7G0D7
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein of unknown function (DUF1015)
EggNOG OGs2SMYX@2759,COG4198@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size621
Cds size609
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10761.482.1prot_H-paniculata_contig10761.482.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig10761 410..6533 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928779.485905-CDS-H-paniculata_contig10761:409..5631622928779.485905-CDS-H-paniculata_contig10761:409..563Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10761 410..563 -
1691480616.7339315-CDS-H-paniculata_contig10761:409..5631691480616.7339315-CDS-H-paniculata_contig10761:409..563Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10761 410..563 -
1622928779.4977324-CDS-H-paniculata_contig10761:2727..28861622928779.4977324-CDS-H-paniculata_contig10761:2727..2886Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10761 2728..2886 -
1691480616.743602-CDS-H-paniculata_contig10761:2727..28861691480616.743602-CDS-H-paniculata_contig10761:2727..2886Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10761 2728..2886 -
1622928779.5122683-CDS-H-paniculata_contig10761:3402..35371622928779.5122683-CDS-H-paniculata_contig10761:3402..3537Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10761 3403..3537 -
1691480616.7535186-CDS-H-paniculata_contig10761:3402..35371691480616.7535186-CDS-H-paniculata_contig10761:3402..3537Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10761 3403..3537 -
1622928779.5239754-CDS-H-paniculata_contig10761:6372..65331622928779.5239754-CDS-H-paniculata_contig10761:6372..6533Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10761 6373..6533 -
1691480616.760775-CDS-H-paniculata_contig10761:6372..65331691480616.760775-CDS-H-paniculata_contig10761:6372..6533Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10761 6373..6533 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928779.5363038-UTR-H-paniculata_contig10761:6533..65451622928779.5363038-UTR-H-paniculata_contig10761:6533..6545Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10761 6534..6545 -
1691480616.7715697-UTR-H-paniculata_contig10761:6533..65451691480616.7715697-UTR-H-paniculata_contig10761:6533..6545Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10761 6534..6545 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig10761.482.1

>prot_H-paniculata_contig10761.482.1 ID=prot_H-paniculata_contig10761.482.1|Name=mRNA_H-paniculata_contig10761.482.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=203bp
MGNRNLRQFMENGWLLADKTPCFYIYSQKMGDHTQTGVVAGVPVEDYALG
IIKRHEKTQVKKENDRTRLTHMQNANAGPVFLTYRAEQGVDEIVKDIARG
DPEVNFMAADGVEHCVWPVRDPVVVFSLQRAFEAVQSTYIADGHHRSASA
FRVGEMKIKEAIQRGETITGEEPFNFFLAVLFPANQLLCMEYNRVVRDLA
GFT
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mRNA from alignment at H-paniculata_contig10761:410..6545-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10761.482.1 ID=mRNA_H-paniculata_contig10761.482.1|Name=mRNA_H-paniculata_contig10761.482.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6136bp|location=Sequence derived from alignment at H-paniculata_contig10761:410..6545- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGGTATATGAAATGGGGAACCGAAATCTGCGACAATTCATGGAAAACGG TTGGCTGTTGGCGGACAAAACTCCGTGCTTCTACATCTACTCCCAGAAGA TGGGAGATCACACTCAGACGGGGGTAGTGGCAGGCGTTCCCGTAGAGGAT TATGCCCTCGGCATCATCAAAAGGTGAAAGTCATACCTCAATCTGTACGC TTGTAATTCACCGTGTGCGTCCCTTAGTGTCAAAGACGTTTTCGAAGGTC CATGCGATTGGTGGGTATATATATGTACTCCCTCTGTTCCGTAAGTCTGG GCACTTGAGGAAATTTTCCATATCTCCTCGGGATGGTGTTCGATTTACAA ACGGATTGTTCGTGTTGGATTCTGTGACGTTTTTGTGATGCAAATAAATG CATGTTTTTTTGTTCTTCGGTACCATCTATCCACCAACCGAGCGCCGCCG CGCAGCCTCTTGGTCTACCGGGACGCGTTTTGCCAACCCCACCCCTCCTC CCGCTGCCTTTTGTTTGTGCCTGTGTGCTCTACCTAGAAATTGTTCCCTC CCTTGGCTTTCAAAACCTGATTGTACCTCTTGAACAGACTCTGCCATACT CGCTCTAGCGTCTCTGCATCGTACACGTCGTACATGCCCTTTACTCTTCC TCTACGAGGGCATCGATCGTGCCAAAACGCTCCCCCCATACTCTACTCTT CAGAGACGCAAAAAACCCCAAATCGTTGATGTTGAAGTATGGCGACTGCG CTGGCTGCGTCACGAGCTTTATGCATCACCCCCACCCCCCCTCCCTCCCC GCTCTGTTCAGCGTCTTCGGCGTGCCCTTGCCCGTGTGCGGTGTCGGATC TTGGCCTCCTTCAGCGGCGTAAAATCTGACGGCCGGCCAACTCCTCCCTA CGTTTTCAGAGAGACCGCATTCCCTTCCTCTAATTGCTTTACCACGCGCC CCTTCGACGTCCCCGGATATTTCTCGGTGACCCCGAATTCTTTAGCCAAC TTAGACCCGATGCCTGCCGGAAGTCTTTTTTTTCTCGGAGGAAGAGCAAG CGCGTATCGCAGAGCAAGCGCGTTCTGGCTCCCCTCACGCAGCTCGCAAT TTTTGCCCCTCGCAGATGAAGAGTTCCCACCAGCTGATGGAGATTCGAAC CCGGTGGGCGGAATCTGCGCGCTCGCCATCGCGTTTCAATGGATAGGTAG TCCGTTCGGGGGGTTGTGGTAAAATTTGTAGGAGTGTGTAGGGCTCTGGG GGCAAGCGACGATGTTGTAAGAGTAGTGGGCGACGACAACGCGCTGCGAA ACCATTCAAAAGGAGCCGGAAAACGCGTCCAAGTCACGAAATGATCAAGA GGAATTATTCTTCTTTTCGGAACACAAATTCGGAACAAAAAATAGAACAG AATCTTTGGCTCATAGGGAAAGCGCCAAGGACCCCAACCCAACAATTCGT TTTGAAATCGAACTTCATCCCGAGGAGATACGCAGAAATGACATAAGTGC CCAGACTTATGGAACAGAGGGAGTATGATAATATCAATAATGCTAATATC ATTAGTATGGAAAGCACGTTCCTGACGTTCCTGGGACTCCTGAACCCCGA CCCCCTACACAACGACCAATGGAATTTTGTCCCTTTCTCGGCACAATTTT CTAGCTGTGTCCGACACCCCGATGGTCACTCCATCTACGACAGAACAAAA CCCAAGTGCTTGCTCCGCACTACATCCCAAGACCTAGAACCGACTCGCGT AGAGCAGGCGGTGTCCCCTCGAGAGCCAGTCTCTCCCGGGAGCATCGTGC TCTCATTAGTAGTAATATCAACACTACTACTACTACTACTACTACTACTA TTAATAAGAATAATCTGGAGCGAGGAGGGAGCGCTACCGTACGTTAGACG CCCTTGTAGAGGGGGTTAGGAGCATGTACGGCCATTATGACACGGATACT TTGGAGTTGATTTGGCAGAGCCTCTTCAAGCGGTACAGCTAAGTGTTGAA AGCGTTGATGGGAAAGGATTTAGACGTTAGGCATACCGGAAGCGAAAAAA GGCAGCGTGAGGGGCTTGTGGACCACTTGGTCCCGATTGACAGAACCGCT TACGACGTGGCCTTTAATTGGTGGATTAATAGGGAGGATGGCAATAACGA ACACTGAAGATTTTGTACTACGTAGTATGAAACGCCAAGGGATACAACAC AACAAACTCTATGTCTTAGTTGGAGGTCTCCTTGAGAGTCTTATGAACCG TTAACCATGCTGTTCAGCCGACTTGGGCCTATTCAGCTGTTTTTACAAAT ATCTGCAATTTTCGAAAGATGAAAAAAAAAAAAAACACGTGTTGAGATAA TACCCGATTATCAACCATTTCGAACTCAAAACACACTTGGAAAAAAAAAA AAAATCTTACATGCGAGCTGAACATGTAGGCAGCCTTTCGAATGATATGC TTTAAGTTTCACGAAACCCCCAAATTGCAAAATATACACTAGGAAATACC CCTATTAGCCAGACAGAGGTATTATAGTACTCCAATATACTATTTAATGA TTATTTATCTATTTTCGTGGTGGATAATTCTCCCATCGGAACCTCCTGTC CGAAGCTGGGAGTGTAGCTACAGTAATGCCTCGGCTCTTGTCTTGTAAGT ATCGCACGGTGGGAGTGTAGCTTACAGTAATACTTGAGTTGATGGCGGAA CACCTTCAAAGTACTTGCCTCCCTTTTCGTTTGCGGACGGTTTTCGTTGC CGCATACAGTTTAACATTTTCCCCGCGAGCTGTCTGACTTTTCGCCATGT ATGTACGTGTGCGTGTGTGTGCATGTGTGTGCGTGTGTTTTCCACCTCTT CACTTGCTGCTTTCTCATGTGTCTCTCTCTGTGTTTGTGTGTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATGTGTGTGCTTCATATGCT TGTATTAACCAGATTTGAACGACCAACACTAATTAATTATTATCAAAAAC TAAAACAGGCATGAGAAGACCCAAGTGAAGAAGGAGAACGATCGCACACG ACTCACCCACATGCAGAACGCCAACGCGGGACCCGTGTTTTTGACGTATC GTGCCGAGCAAGGGGTCGACGAGATTGTGAAAGATATCGCTCGGTGAGTC TTTTTTTTTCAGCCAAGTGAGTCCGTTGCTCTCTTTTTTTGCTTTTCCCG TCTTCCACCTGTGGCCCGAACAAAATGTGGAACCCTTTCAGCGTGACCCA ATTTGGAGTAGATGTTTACTGCAGGAACTTTTGTACGGTATAAATCATGA CCAGAGTGTACAGAGCTTTAAATGTCTTAGCCGCGGATAAATAAGAAGAA TCTTTGAAATGGATCGTGACCAGGTCGGATGTGTGAAGGATTTTACGCCC CGAACAACTGTTCAAGTTTGCTAGAAAATCATTCGATTTTAGTGTACTCA AGTCAACCATCTAAGTTTTTTTTTTTTTTTTTTTCGACTGTGGTTAATTG ATGCCAAGCAAACGGAGGACTGAAAGCTGTCCGCGTTAATTCCTCCAAAA CCGCGGTCAAAACAGGTTTATTTCGTTGACTCAATAATTGTCCGGGACGA AGGATTTACTACTCATGGATTATGACCAAGTTGCTCTTGTCGTTTAATGG TGCTTTCAGGGGTGACCCTGAGGTGAACTTCATGGCGGCGGACGGTGTGG AGCATTGCGTGTGGCCTGTTAGGGATCCCGTTGTGGTGTTCTCCCTGCAG AGAGCGTTTGAGGCTGTACAGTCTACCTACATCGCGGACGGTCACCATCG GAGCGCGTCAGCATTCAGGTGAGGATACGGAGAGACGTACGTCAAGAAAA AGAAACAAGCGAAGTTAATTATTTCAGTAGGTGTAGAGGAAAAGGGACAA AACAGGTTGTCGCATAGGCGCCTCACCCGCGAGTAGTCCCGTCCGAGGAA CCTGCCTGCGGAATTTTGGATACTTTCAGCTGGGCCAAAATTGATGGAGG ATGACGTGGTATCTAGAACTAGCGTACGAATGCTAGATGTGACTTTCCCA GTGGAAGCATATGTCAGATTTTTTTTTCCCTTGGTTATCTGTTCGTCCCA ACGACCACTTCTTATCTTGGCCTTTTTTTTTTTTACGGATAATTTTGTTG CCTGAAAAAAGCTTTAATTGGCATTTTTTTTTTTCACATGTTGGGGCATT TTACACATGTAGATTGTGTGTTTTAGTACACTTGATCGTTTTTTTTTATG AATCGACTCGCGGATTCGTTGATAGATTGATTAATTGATTAAATTAAAAG TCATGTGTGAGTTTTTTTTGTTTTTTTTTCCACCGAACGGTTGTCCGTAT TTTGCATGTAAAGAAAGTTTCCGTTCATGTGAAAAGTTGCGAAGGTCGTC ATGGTGTAGTGCTAGTGTATTGCCCATTTGCTGAATTCAATCTATCAATA GTATGATACGTTAAAATTATTTTTTGGTCCGTGCAGACTTGGGTTTATAT GAGAGACTCACCATTCGGCCATACAAGCAAGTACCGTAAAACCCTTTGCT GGTGCACCGGGTGCGATTATTGTTTTTGAACTTGATTTTCTGGAGAAGAA CGACCCTCCGAGTACCGAAAGCATGACCATCGCCAGGTCTGGAGGAGATC TTTCGAACAGCACAACTTTTGTTGTCCTGAGCACTGTAGGTTAAAAACTT GTCGCACCCGGTGCGCCGCCAGCAAAGAGTTTCACGGTATAGCTGCCAGG CCCCGCTTGGAAGTTCATGTTATACAGTTCTTGTGACTGTGTAGGAAAGT GCCAACTCGAAGACGACATTTTATTTTTTATTTTTTTCAAGGTTTTGGTT GAATTGGTTTTTTATTTGATTGGTTGATTCAATATGCACATGCACACGCA CAAATATTTAGGTCACTGAGTAATTTGTTCGTATGACTTTTTATTTTATT TTTTATGTACTATGTTCCGCCTGACTGTGTGTGTACTGTAGTGAATGTAC TACATGAGGCAAATGAATGTGGTAGCCTGAGCGTACTGTACTGTACTGTA CTGCATACAAATACAAATACAAATACAAATACATCGGTGAATATACGGAA ACACTGACCACGCCACACTCTATGGACATGAAGTATTGACTCAACAAAGA CCCAATACAACTCGGAGCGAAATGGAAGTCTGCCCCCTATAACAAAATAT ATAAAGCCAGAAGAGGTAAAACGCGCGCGAAGTACTTAAGATTTGGATAA TGAACTCAAGGCTGAAAACCACAGCGCGAAGTTAGCTTGAAATGCTGCAG GAGCCAGATGTTAGACTACAGCGCCATAAATTTGCGAAAGCAATTTGGGA CACAGACGGGGCTTTTTTCGGGGTGACCAACGGGACTTTGAAAAATGCCG ACCTAGTGTGATGAAATCAACAGAAAAATGAATAGAATGAGCGTTTTACC GGGCTTTTTCGCGTAGCAGTTATAGGGGTGGAGGTCATCTGACATACAAA TGTGCACTTGGTATGGTGGCGTGCAGGCTTTAGGAACCTGCGGGAAATCC CTGTAAAAGCTCCTGAATTTGACCAAGGGCTATATATGAGGGACAAATTA TACTGGTGACACAGATCTGTCTGTGCAAACGACATGAGTTTTGATGCTCG CTATCTCCTTTCACAGTTCAACACAGGTCACGCGTTCTCGAACGAAGAAT AGCGCGGCTACTTCATATGTACCCCATGCTCACAAGTCACTCTCGCTGGA TATCGAGTGCGACGTTCGTTGCAATGGTCAACAGCAGCTGCAGCTTTTCT CGGAGAATAGTTGCAGAAGATTTCATGTCCATATGAGCCTCCGTTTTGTT CTTTTCCGTTTTTGTTTTTTGTATAGATAAGATGGCGTTTTTTCAATATG ATATCCAGCTTCAAAGGGGTAAACGTTTTGCCACGTTTTTTCACGTTTTA TCTGATGTACATACATGTACACACATCCACAGGGTGGGCGAAATGAAGAT TAAGGAGGCCATACAGCGGGGCGAAACGATCACGGGCGAAGAGCCGTTCA ATTTTTTCCTGGCCGTTCTGTTCCCGGCAAACCAGCTGCTGTGCATGGAG TACAATAGAGTTGTGCGTGACCTCGCTGGCTTTACG
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Coding sequence (CDS) from alignment at H-paniculata_contig10761:410..6545-

>mRNA_H-paniculata_contig10761.482.1 ID=mRNA_H-paniculata_contig10761.482.1|Name=mRNA_H-paniculata_contig10761.482.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1218bp|location=Sequence derived from alignment at H-paniculata_contig10761:410..6545- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGAACCGAAATCTGCGACAATTCATGGAAAACGGTTGGCTGTTGGC
GGACAAAACTCCGTGCTTCTACATCTACTCCCAGAAGATGGGAGATCACA
CTCAGACGGGGGTAGTGGCAGGCGTTCCCGTAGAGGATTATGCCCTCGGC
ATCATCAAAAGATGGGGAACCGAAATCTGCGACAATTCATGGAAAACGGT
TGGCTGTTGGCGGACAAAACTCCGTGCTTCTACATCTACTCCCAGAAGAT
GGGAGATCACACTCAGACGGGGGTAGTGGCAGGCGTTCCCGTAGAGGATT
ATGCCCTCGGCATCATCAAAAGGCATGAGAAGACCCAAGTGAAGAAGGAG
AACGATCGCACACGACTCACCCACATGCAGAACGCCAACGCGGGACCCGT
GTTTTTGACGTATCGTGCCGAGCAAGGGGTCGACGAGATTGTGAAAGATA
TCGCTCGGCATGAGAAGACCCAAGTGAAGAAGGAGAACGATCGCACACGA
CTCACCCACATGCAGAACGCCAACGCGGGACCCGTGTTTTTGACGTATCG
TGCCGAGCAAGGGGTCGACGAGATTGTGAAAGATATCGCTCGGGGTGACC
CTGAGGTGAACTTCATGGCGGCGGACGGTGTGGAGCATTGCGTGTGGCCT
GTTAGGGATCCCGTTGTGGTGTTCTCCCTGCAGAGAGCGTTTGAGGCTGT
ACAGTCTACCTACATCGCGGACGGTCACCATCGGAGCGCGTCAGCATTCA
GGGGTGACCCTGAGGTGAACTTCATGGCGGCGGACGGTGTGGAGCATTGC
GTGTGGCCTGTTAGGGATCCCGTTGTGGTGTTCTCCCTGCAGAGAGCGTT
TGAGGCTGTACAGTCTACCTACATCGCGGACGGTCACCATCGGAGCGCGT
CAGCATTCAGGGTGGGCGAAATGAAGATTAAGGAGGCCATACAGCGGGGC
GAAACGATCACGGGCGAAGAGCCGTTCAATTTTTTCCTGGCCGTTCTGTT
CCCGGCAAACCAGCTGCTGTGCATGGAGTACAATAGAGTTGTGCGTGACC
TCGCTGGCTTTACGGGTGGGCGAAATGAAGATTAAGGAGGCCATACAGCG
GGGCGAAACGATCACGGGCGAAGAGCCGTTCAATTTTTTCCTGGCCGTTC
TGTTCCCGGCAAACCAGCTGCTGTGCATGGAGTACAATAGAGTTGTGCGT
GACCTCGCTGGCTTTACG
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