mRNA_H-paniculata_contig10756.481.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig10756.481.1
Unique NamemRNA_H-paniculata_contig10756.481.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig10756.481.1 vs. uniprot
Match: D7G3C3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C3_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 2.230e-60
Identity = 183/456 (40.13%), Postives = 219/456 (48.03%), Query Frame = 3 
Query:    3 MGFMFDSALPKSRRIFHFGNDMTVAVRLVDDDPGAVQSGHYVWPAAPALCSYLISRWPQLPHG-TVLELGAGCGLAGLVAAQLPGTRVVIFTDHDAGVLDLIRESIAEQS-----GGSSPAALDRRIAKKAVAAAACARLPWGPVGKAEHTALTDALTSVGIKSPP-PLSGET--KLGNARDDESGTTVTEA--------LRKTNVSCSAS----------------------FDLVIASDVIYSISVVEPLFETVGALLLLPAAAAAVGPDEALLSRGD-WRNEGEVVARSGNKMHHYXXXRDGKEQGQPSAPLTSLSLGXXXXXXXXXXXXXXXXXXXMLAGMDYTDSLLPXXXXXXXXXXTSTQGGCNNHLPHXXXXXXXGDSGNSRPTAAATEHCCRRYFPVSTCTNAAVAVTPAPVFVMSQSFVYEPETEEAIARACERHGLLREVVWDEL 1250
            +GFMFD+ALPK+RR F FG D++VAVRLVDDDPGAVQSGHYVWPAAPAL +YL+ R   LP G   LELGAGCGLAGLVAAQLP T+ V+FTDHD GVLD+IRESI EQ      GGS+ AA  R           C +L WG VG A+  +L  AL+SV   S P P   E   +  N  ++  G+T            L +  +  +                        FDLVIASDVIYS+SVVEPLF TVG LL  P        ++    RG+ +  EG V   +G             E   P  P                             G D + S++P         X             XXXXXXX     +  T                           PVF+MSQSF Y+PETE+ I RAC   GL+REVVWDEL
Sbjct:    6 VGFMFDNALPKTRRSFRFG-DISVAVRLVDDDPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLPLTKAVVFTDHDPGVLDMIRESIEEQQQQPELGGSAAAAKSR-----------CVQLSWGTVGNAQRASLAHALSSVAASSTPRPRRDEALVRTRNLAEEVGGSTSRSGPGRGSGAGLSRGRIDGARGXXXXXXXXXXXXXXXSGGGGVLFDLVIASDVIYSVSVVEPLFLTVGELLR-PRCCPCPSREK----RGEVFCAEGAVETGAG-------------EARPPREPAPGKG------------EEAVERRQAAGTGGDGSGSIVPEEEVPVLSPXXXXXXXXXXXXXXXXXXXXXXXXXXADGT---------------------------PVFLMSQSFGYDPETEKTIERACVEQGLVREVVWDEL 392
[Close]
BLAST of mRNA_H-paniculata_contig10756.481.1 vs. uniprot
Match: A0A6H5KXF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXF9_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 2.970e-57
Identity = 134/258 (51.94%), Postives = 156/258 (60.47%), Query Frame = 3 
Query:   12 MFDSALPKSRRIFHFGNDMTVAVRLVDDDPGAVQSGHYVWPAAPALCSYLISRWPQLPHG-TVLELGAGCGLAGLVAAQLPGTRVVIFTDHDAGVLDLIRESIAEQS-----GGSSPAALDRRIAKKAVAAAACARLPWGPVGKAEHTALTDALTSVGIKSPPPLSGETKLGNARD--DESGTTVT---------EALRKTNVSCSAS-----------------------FDLVIASDVIYSISVVEPLFETVGALL 665
            MFD+ALPK+RR F FG D++VAVRLVDDDPGAVQSGHYVWPAAPAL +YL+ R   LP G   LELGAGCGLAGLVAAQLP T  V+FTDHD GVLD+IRESI EQ      GGS+ AA  R           C +L WG VG A+  +L +AL+SV   SPP  S +  L   R+  +E G + +         + L +  V    S                       FDLVIASDVIYS+SVVEPLF TVG LL
Sbjct:    1 MFDNALPKTRRSFRFG-DISVAVRLVDDDPGAVQSGHYVWPAAPALSAYLVDRRLALPRGGRCLELGAGCGLAGLVAAQLPLTTAVVFTDHDPGVLDMIRESIEEQQQQPELGGSAAAAKSR-----------CVQLSWGSVGNAQRASLANALSSVAASSPPRPSRDEALVRTRNLAEEVGGSTSGGAPXXXSGDGLSRRRVDGERSDRSDXXXXXXXXXXXXXXXXGVLFDLVIASDVIYSVSVVEPLFLTVGELL 246
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BLAST of mRNA_H-paniculata_contig10756.481.1 vs. uniprot
Match: A0A836CF84_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF84_9STRA)

HSP 1 Score: 151 bits (382), Expect = 1.950e-38
Identity = 94/224 (41.96%), Postives = 124/224 (55.36%), Query Frame = 3 
Query:    3 MGFMFDSALPKSRRIFHFGNDMTVAVRLVDDDPGAVQSGHYVWPAAPALCSYLISRWPQLPHGTVLELGAGCGLAGLVAAQLPGTRVVIFTDHDAGVLDLIRESIAEQSGGSSPAALDRRIAKKAVAAAACARLPWGPVGKAEHTALTDALTSVGIKSPPPLSGETKLGNARDDESGTTVTEALRKTNVSCSASFDLVIASDVIYSISVVEPLFETVGALLLLP 674
            +GFMFD+ LP+++R F FG  ++  ++ VDD+PGAVQSGHY+WPA+P L SYL+ +   +P G+VLELGAGCGLAGL AAQL G   V+FTDHD GV++L++E+I       S        AK  V AA    L WG V +    A+  A    G++ P                                + +F LV+ SDVIY+ SVV PLF T  A L  P
Sbjct:    5 LGFMFDTGLPRTQRTFTFG-PISTTLQFVDDEPGAVQSGHYLWPASPCLASYLVEQRESIPAGSVLELGAGCGLAGLTAAQLTGVSAVVFTDHDFGVIELLQENIEHLRQAGS--------AKAGVLAAQS--LSWGEVDQKTVAAVHAA---AGLQQPQ-------------------------------AGAFSLVLGSDVIYAKSVVRPLFATACAFLAQP 183
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BLAST of mRNA_H-paniculata_contig10756.481.1 vs. uniprot
Match: A0A662XQW1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQW1_9STRA)

HSP 1 Score: 133 bits (334), Expect = 9.550e-32
Identity = 89/221 (40.27%), Postives = 111/221 (50.23%), Query Frame = 3 
Query:    3 MGFMFDSALPKSRRIFHFGNDMTVAVRLVDDDPGAVQSGHYVWPAAPALCSYLISRWPQLPHGTVLELGAGCGLAGLVAAQLPGTRVVIFTDHDAGVLDLIRESIAEQSGGSSPAALDRRIAKKAVAAAACARLPWGPVGKAEHTALTDALTSVGIKSPPPLSGETKLGNARDDESGTTVTEALRKTNVSCSASFDLVIASDVIYSISVVEPLFETVGALL 665
            +GFMFD+ L K    F +G D++V +    ++PGA+QSGHYVWPAAPALC YL S    +P G V+ELGAGCGL GL  AQL     VIFTDHD GVL +I  +  +Q              ++  AA     L WGP G AE  AL                   KL +               + N  C+   DL++ SDVIY+  VV  LF TV  LL
Sbjct:   31 VGFMFDACLEKVTCRFDYGADVSVLLTYATEEPGALQSGHYVWPAAPALCEYLESHRELIPGGNVVELGAGCGLTGLAIAQLRPDATVIFTDHDPGVLKVIEHNAGQQ--------------ERVQAACLTQSLRWGPDGAAEVAALE------------------KLQS---------------QANKLCTT--DLIVGSDVIYAREVVPLLFWTVDRLL 202
[Close]
BLAST of mRNA_H-paniculata_contig10756.481.1 vs. uniprot
Match: A0A3R7II17_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7II17_9STRA)

HSP 1 Score: 129 bits (323), Expect = 8.330e-31
Identity = 89/223 (39.91%), Postives = 112/223 (50.22%), Query Frame = 3 
Query:    3 MGFMFDSALPKSRRIFHFGNDMTVAVRLV--DDDPGAVQSGHYVWPAAPALCSYLISRWPQLPHGTVLELGAGCGLAGLVAAQLPGTRVVIFTDHDAGVLDLIRESIAEQSGGSSPAALDRRIAKKAVAAAACARLPWGPVGKAEHTALTDALTSVGIKSPPPLSGETKLGNARDDESGTTVTEALRKTNVSCSASFDLVIASDVIYSISVVEPLFETVGALL 665
            +GFMFD+ L K    +++G +  V+V L    ++PGA+QSGHYVWPAAPA+C YL S    +P GTV+ELGAGCGL GL  AQL     VIFTDHD GVL +I  + ++Q              ++  A      L WGP G  E  AL              L+G T          GT  T              DL++ SDVIY+  VV  LF TV  LL
Sbjct:   17 VGFMFDACLEKETCRYNYGPNAAVSVVLTYAKEEPGALQSGHYVWPAAPAMCEYLTSHRDVIPAGTVVELGAGCGLTGLAVAQLRPEATVIFTDHDPGVLKVIEHNASQQ--------------ERVQATCLTQSLRWGPDGATELEALKK------------LNGPT----------GTQTT--------------DLIVGSDVIYAREVVPLLFWTVDRLL 189
[Close]
BLAST of mRNA_H-paniculata_contig10756.481.1 vs. uniprot
Match: A0A484DVN6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DVN6_BRELC)

HSP 1 Score: 129 bits (324), Expect = 1.650e-30
Identity = 88/223 (39.46%), Postives = 108/223 (48.43%), Query Frame = 3 
Query:    3 MGFMFDSALPKSRRIFHFGNDMTVAVRLV--DDDPGAVQSGHYVWPAAPALCSYLISRWPQLPHGTVLELGAGCGLAGLVAAQLPGTRVVIFTDHDAGVLDLIRESIAEQSGGSSPAALDRRIAKKAVAAAACARLPWGPVGKAEHTALTDALTSVGIKSPPPLSGETKLGNARDDESGTTVTEALRKTNVSCSASFDLVIASDVIYSISVVEPLFETVGALL 665
            +GFMFD+ L K    F +G+D  V+V L    +DPG VQSGHYVWPAAPALC YL      +P G V+ELGAGCGL GL  AQL     VIFTDHD GVL +I  +  +Q              ++  A+     L WGP G  E  AL    T                               + +T V+     DL++ SDVIY+  VV  LF TV  LL
Sbjct:   17 VGFMFDACLEKVTCQFEYGDDAEVSVLLTYAKEDPGVVQSGHYVWPAAPALCEYLTKHRDIIPSGNVVELGAGCGLTGLAIAQLRPEATVIFTDHDPGVLKVIAHNAGQQ--------------ERKQASCLTQSLRWGPDGAKEIEALEKLQTG-----------------------------PINRTRVT-----DLIVGSDVIYAREVVPLLFWTVDRLL 191
[Close]
BLAST of mRNA_H-paniculata_contig10756.481.1 vs. uniprot
Match: A0A6G0XQM1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XQM1_9STRA)

HSP 1 Score: 130 bits (326), Expect = 2.430e-30
Identity = 89/232 (38.36%), Postives = 116/232 (50.00%), Query Frame = 3 
Query:    3 MGFMFDSALPKSRRIFHFGNDM-----------TVAVRLVDDDPGAVQSGHYVWPAAPALCSYLISRWPQLPHGTVLELGAGCGLAGLVAAQLPGTRVVIFTDHDAGVLDLIRESIAEQSGGSSPAALDRRIAKKAVAAAACARLPWGPVGKAEHTALTDALTSVGIKSPPPLSGETKLGNARDDESGTTVTEALRKTNVSCSASFDLVIASDVIYSISVVEPLFETVGALL 665
            +GFM+D  L K    F +G+ +           +V +  V D+PG VQSGHYVWPAAPALC+Y+   + QLP G ++ELGAGCGLAGLV AQL  +  VIFTDHD GVL  I+ ++++Q             A +  A      L WGP G  E   +    TS                   DD      T A +KT        DL++ +DVIY+  +V  LF TV  LL
Sbjct:   40 IGFMYDDCLEKVTCEFTYGSTVNPASGAVEPRVSVLLSYVQDEPGFVQSGHYVWPAAPALCAYMEENFDQLPRGNIVELGAGCGLAGLVFAQLDPSSTVIFTDHDPGVLKTIQHNVSKQ-------------AHRPQAVCHTQSLRWGPQGANEVEQIAAIQTS-------------------DD-----ATSATQKT--------DLIVGTDVIYAREIVGLLFWTVDRLL 226
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BLAST of mRNA_H-paniculata_contig10756.481.1 vs. uniprot
Match: G4ZH96_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZH96_PHYSP)

HSP 1 Score: 128 bits (321), Expect = 4.780e-30
Identity = 84/223 (37.67%), Postives = 108/223 (48.43%), Query Frame = 3 
Query:    3 MGFMFDSALPKSRRIFHFG--NDMTVAVRLVDDDPGAVQSGHYVWPAAPALCSYLISRWPQLPHGTVLELGAGCGLAGLVAAQLPGTRVVIFTDHDAGVLDLIRESIAEQSGGSSPAALDRRIAKKAVAAAACARLPWGPVGKAEHTALTDALTSVGIKSPPPLSGETKLGNARDDESGTTVTEALRKTNVSCSASFDLVIASDVIYSISVVEPLFETVGALL 665
            +GFMFD+ L K    + +G  ND++V +    ++PGA+QSGHYVWPAAPALC YL +    +P G V+ELGAGCGL GL  AQL     VIFTDHD GVL +I  +  +Q              ++A A      L WGP G  E  AL                                  E L+        + +L++ SDVIY+  VV  LF TV  LL
Sbjct:   17 VGFMFDACLEKVTCRYEYGANNDVSVLLTYAKEEPGALQSGHYVWPAAPALCEYLAAHRDAIPSGNVVELGAGCGLTGLAVAQLRPDATVIFTDHDPGVLKVIEHNTGQQ--------------ERAQATCLTQSLRWGPDGAKEIEAL----------------------------------ERLQTGPAGSKHATELIVGSDVIYAREVVPLLFWTVDRLL 191
[Close]
BLAST of mRNA_H-paniculata_contig10756.481.1 vs. uniprot
Match: A0A3F2RSN9_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RSN9_9STRA)

HSP 1 Score: 129 bits (323), Expect = 5.500e-30
Identity = 89/223 (39.91%), Postives = 112/223 (50.22%), Query Frame = 3 
Query:    3 MGFMFDSALPKSRRIFHFGNDMTVAVRLV--DDDPGAVQSGHYVWPAAPALCSYLISRWPQLPHGTVLELGAGCGLAGLVAAQLPGTRVVIFTDHDAGVLDLIRESIAEQSGGSSPAALDRRIAKKAVAAAACARLPWGPVGKAEHTALTDALTSVGIKSPPPLSGETKLGNARDDESGTTVTEALRKTNVSCSASFDLVIASDVIYSISVVEPLFETVGALL 665
            +GFMFD+ L K    +++G +  V+V L    ++PGA+QSGHYVWPAAPA+C YL S    +P GTV+ELGAGCGL GL  AQL     VIFTDHD GVL +I  + ++Q              ++  A      L WGP G  E  AL              L+G T          GT  T              DL++ SDVIY+  VV  LF TV  LL
Sbjct:   17 VGFMFDACLEKETCRYNYGPNAAVSVVLTYAKEEPGALQSGHYVWPAAPAMCEYLTSHRDVIPAGTVVELGAGCGLTGLAVAQLRPEATVIFTDHDPGVLKVIEHNASQQ--------------ERVQATCLTQSLRWGPDGATELEALKK------------LNGPT----------GTQTT--------------DLIVGSDVIYAREVVPLLFWTVDRLL 189
[Close]
BLAST of mRNA_H-paniculata_contig10756.481.1 vs. uniprot
Match: A0A067D2D9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D2D9_SAPPC)

HSP 1 Score: 127 bits (320), Expect = 9.770e-30
Identity = 87/227 (38.33%), Postives = 108/227 (47.58%), Query Frame = 3 
Query:    3 MGFMFDSALPKSRRIFHFGNDMTVAVRL------VDDDPGAVQSGHYVWPAAPALCSYLISRWPQLPHGTVLELGAGCGLAGLVAAQLPGTRVVIFTDHDAGVLDLIRESIAEQSGGSSPAALDRRIAKKAVAAAACARLPWGPVGKAEHTALTDALTSVGIKSPPPLSGETKLGNARDDESGTTVTEALRKTNVSCSASFDLVIASDVIYSISVVEPLFETVGALL 665
            +GFMFD  L K    F +G   + A R+      V D+PG VQSGHYVWPAAPALC Y++S +  LP G VLELGAGCGLAGLV AQL     +IFTDHD GVL  I  ++  Q+              +A A      L WGP G  E  A+                           +SG   T              DL++ +DVIY+  +V  LF T+  LL
Sbjct:   36 VGFMFDDCLEKVTCEFTYGTSSSGAPRVSVMLSYVQDNPGFVQSGHYVWPAAPALCEYMVSNFESLPRGNVLELGAGCGLAGLVFAQLDPASRIIFTDHDPGVLKTIEHNVTMQT-------------HRAQATCHTQSLRWGPEGANEIEAIERV------------------------QSGQRAT--------------DLIVGTDVIYAREIVSLLFWTIDQLL 211
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10756.481.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3C3_ECTSI2.230e-6040.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXF9_9PHAE2.970e-5751.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CF84_9STRA1.950e-3841.96Putative methyltransferase-domain-containing prote... [more]
A0A662XQW1_9STRA9.550e-3240.27Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]
A0A3R7II17_9STRA8.330e-3139.91Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A484DVN6_BRELC1.650e-3039.46Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A6G0XQM1_9STRA2.430e-3038.36Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
G4ZH96_PHYSP4.780e-3037.67Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A3F2RSN9_9STRA5.500e-3039.91Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A067D2D9_SAPPC9.770e-3038.33Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10756contigH-paniculata_contig10756:3655..7840 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score221.9
Seed ortholog evalue7.1e-55
Seed eggNOG ortholog2880.D7G3C3
KEGG koko:K21804
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Lysine methyltransferase
EggNOG OGs28K01@1,2QSEH@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03110
Exons4
Model size1675
Cds size1557
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10756.481.1prot_H-paniculata_contig10756.481.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig10756 3771..7838 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928779.367111-UTR-H-paniculata_contig10756:3654..37701622928779.367111-UTR-H-paniculata_contig10756:3654..3770Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10756 3655..3770 -
1691480616.67017-UTR-H-paniculata_contig10756:3654..37701691480616.67017-UTR-H-paniculata_contig10756:3654..3770Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10756 3655..3770 -
1622928779.4461124-UTR-H-paniculata_contig10756:7838..78401622928779.4461124-UTR-H-paniculata_contig10756:7838..7840Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10756 7839..7840 -
1691480616.7264369-UTR-H-paniculata_contig10756:7838..78401691480616.7264369-UTR-H-paniculata_contig10756:7838..7840Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10756 7839..7840 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928779.387062-CDS-H-paniculata_contig10756:3770..49091622928779.387062-CDS-H-paniculata_contig10756:3770..4909Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10756 3771..4909 -
1691480616.6826503-CDS-H-paniculata_contig10756:3770..49091691480616.6826503-CDS-H-paniculata_contig10756:3770..4909Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10756 3771..4909 -
1622928779.4054115-CDS-H-paniculata_contig10756:5598..57301622928779.4054115-CDS-H-paniculata_contig10756:5598..5730Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10756 5599..5730 -
1691480616.6915858-CDS-H-paniculata_contig10756:5598..57301691480616.6915858-CDS-H-paniculata_contig10756:5598..5730Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10756 5599..5730 -
1622928779.4181914-CDS-H-paniculata_contig10756:6972..71471622928779.4181914-CDS-H-paniculata_contig10756:6972..7147Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10756 6973..7147 -
1691480616.7017252-CDS-H-paniculata_contig10756:6972..71471691480616.7017252-CDS-H-paniculata_contig10756:6972..7147Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10756 6973..7147 -
1622928779.4311912-CDS-H-paniculata_contig10756:7727..78381622928779.4311912-CDS-H-paniculata_contig10756:7727..7838Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10756 7728..7838 -
1691480616.7146301-CDS-H-paniculata_contig10756:7727..78381691480616.7146301-CDS-H-paniculata_contig10756:7727..7838Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10756 7728..7838 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig10756.481.1

>prot_H-paniculata_contig10756.481.1 ID=prot_H-paniculata_contig10756.481.1|Name=mRNA_H-paniculata_contig10756.481.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=519bp
MGFMFDSALPKSRRIFHFGNDMTVAVRLVDDDPGAVQSGHYVWPAAPALC
SYLISRWPQLPHGTVLELGAGCGLAGLVAAQLPGTRVVIFTDHDAGVLDL
IRESIAEQSGGSSPAALDRRIAKKAVAAAACARLPWGPVGKAEHTALTDA
LTSVGIKSPPPLSGETKLGNARDDESGTTVTEALRKTNVSCSASFDLVIA
SDVIYSISVVEPLFETVGALLLLPAAAAAVGPDEALLSRGDWRNEGEVVA
RSGNKMHHYHHHRDGKEQGQPSAPLTSLSLGGSSSSPGGGTSSDDTVVDD
MLAGMDYTDSLLPSPPPPPPPPRTSTQGGCNNHLPHTPPLPPPGDSGNSR
PTAAATEHCCRRYFPVSTCTNAAVAVTPAPVFVMSQSFVYEPETEEAIAR
ACERHGLLREVVWDELQGGSGGNGAEGLEEASRLKSGGEGNDVAGDHCAD
GGTRNSTSGDTIRPQSRIGTVAREEREEERGARHENDSADHLAGGGDDGG
AESVVQRAGTKLQLFWRA*
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mRNA from alignment at H-paniculata_contig10756:3655..7840-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10756.481.1 ID=mRNA_H-paniculata_contig10756.481.1|Name=mRNA_H-paniculata_contig10756.481.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4186bp|location=Sequence derived from alignment at H-paniculata_contig10756:3655..7840- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGATGGGGTTCATGTTCGACAGCGCTCTTCCCAAATCAAGGCGGATTTTT
CACTTTGGCAATGACATGACGGTCGCTGTTAGATTGGTCGACGATGATCC
GGGTGCTGTACAGGTGAGTACAGTACCGCTACAGGAGGTTGTTTTCACAG
CACACTGAAGTATGACGCTGTTGGATACATAGCAAATTGAGTAATATTCG
CCACATTTTCGTTTGGCACTGTACTACTGTACCGCTCAGTCTACCATCTC
CCTCCCCGAAGCATTGCGTGGCTTGGTTTCCAACCTACCATAAATTTGCA
GTCTACCCTACGTGACAGTCACAAGCGCTTGCGTTTGTCAAGATATATAT
ATATATATATATATAATCATCGGCAACAAGCGATCGCTGTGATGCCAAAA
GTTTGTGTGAAGTAATTGGTCAAAATTGATATAACCCACCTCAATATTGG
TAATAGTTTTGCTAATAAGTATTTATTGCCATGATTCATGATCGTGGCCT
ACAGAATCTCAGCGTTACATATACTAGTATGTATACAACAACAATTACCG
TAGATCGAGACAAGGTATAAGACATCTTGTTGACCCTTTGTTCATAGCTT
GCAAACTCGGGCGTGTAGTTAATTTACCCCCCCTCGCCTCCCATCCGTCC
TCCCTTGCGTGGTGCCCTTGGAACGCGAAATACCGAACGAAAGTCCGGTC
ACTATGTGTGGCCCGCGGCGCCGGCGCTCTGCTCCTACCTGATCAGCCGC
TGGCCGCAGCTACCACATGGGACAGTGCTCGAGCTTGGCGCTGGATGCGG
CCTGGCCGGTCTTGTAGCGGCACAACTTCCGGGTACAAGAGTCGTAATTT
TTACCGATCACGACGCAGGTATGGAATTTAGTTTTATGACTCAGAAGAGG
CTTTGACTTTTTTAGTATTCCACCCTCCCCGCGACCACCCCGGGTGATTT
TTTTTGGCAACTTAGTACACGAGATCGTTTCTCGTCCGGAGGTACGTTGC
ATATCACCACCACCTCTCCCCCCGCCCGCCCCTGCCAGCAGCGGGGTATC
ATACGACCAGCGGATTCTGACTTAATTGCGTGAATCGAATGTGATATTGA
AAAAATGAGGAAAGCACGTGGCGCGAACCACGGAGTATGGTAGCATACAA
ACAACGGCACCAAGTGGACGCACATTACAGACATACTCTACTGTACTCGA
AACACACGGAGAACAACACAATGGCAGCAAACCAAGTGCAGGGTGCTGGG
CCCGCCGCGCACTCGGGCGAGGGCCCGGCGACGCCTGATGTCACCCGAGG
CCGCCTACAAGGTTATCACCACCCCTACTGCCTGCCAGCAGCAGAGGTTA
TCACCGGAGGCCGCCTTTCATGCTATCACCCCCCATTTGTCATCATCCCT
TACTACCTGCCAGGGGGTGATATCACCCTGTACGCGTGCACCGAAATCTC
ACGTTTTCACTCGGAGTTACGTTGTATACCACCCCCCCTGTGGAATGAAA
TCACCGAGTAATAATTTTTCGGGCCCCGAAAATTCGTCACCTGAGGGTGT
TATAATGCGTCACCTACGGTAATCCTTCAGGAATTGGACTTCATAACGGC
CAATACATATATATTTGCTAGTGATCAATCGTGAATAATGGATGATGACG
AATCCGTCGATAGAATCCTTACCCAGCTCCAGACAACTTAGCTAGTTAAT
GCATCTCAGGTGAAAAAGGGAAGCGACTTTTTCTTCTTCTGAGGGGCTTT
TTGCCCTGGATTTAGTGTAAAGGGAGAATGGACAAACGTCAGTTTTTGTA
GTGACGGCCAAATAAAACATAAGCATTCCTCCATAGCTGATTAGGCGGTC
AGAAGTTCCTCGAAGAGTAACATGCTGCCAGCACCCAGCCTCTTCACAGC
ATCATTGGTAAACTACCACGTGACAGCACAGCACCCGCGCAAAATCCGAT
AATAATGTGCACGTTGTTGTTGCAGCCTTATTGGACCTCACCGTATGTCA
CCCACACGCTGATGTGGCACAAACACACTCGCAAAATTCCAAAAAAAATC
ACGCTCATTCCGCCCTCGCCCCCGTCCCCCCCCCCCCTCCTACGGTTTTG
TTGAAAGTAGGCGTTTTAGATCTCATTCGAGAAAGTATTGCAGAGCAGAG
CGGGGGCAGTAGCCCCGCCGCACTGGATCGAAGAATTGCCAAGAAGGCGG
TAGCGGCGGCGGCATGTGCAAGATTGCCTTGGGGTCCTGTCGGTAGGTAC
ATGCCTGCGTTTGTTTCAAATTTATCCCGGAGTGTACCTACCTGTATAGG
GCACATGCTCCATAACGGAAAAAAAGACAACCGTGCGAAGTTACGCTCGC
TATGCTGCCCCACCAGTCAGAAAATTCGCTCATATTTTTGTTGGTGTAAG
TGCCTAGCCTAATGCTAGTGTGTGTGTATGTGTTTGTTCGTGTTCGTGTT
TTCTTTCGTTCGCAGTAAGGGACCTTGTTGGTTCAAAGTGGTTTCCACCC
TACAGGAAAAACGTAGACCCTCATATAATTGACGCGGGAATTATCGTATT
CGCTTGGAGGTACTGCTGTAGGAAGTCGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTCCCTTCCCATGCACCCTTATTTTAGGGCGTCGAAG
ATTTTTATGCTGTAGCGTTCAGAGCCGTTCCTCTCTAATCACACCTACCT
TCTCGACCGACGAAGCAAGAAGCAGTAACGTTTATAATTATCATAGCCCC
TGATCGGTATAACCAGTACTTCCATCATGCGCTTACATTTTGAGCAACGT
TTTCCAGCAGGGCGGAAAGAAAGAGCTCGGATTGGTCCCGACTTCCCCTA
GCAAGCGATATACATGGTACAATACCAACGCCTTTTCTCATGACCTTCCC
TGCTCATCCCGTGGGGGCCTCGACGTCGCAGGCAAGGCCGAGCACACCGC
CTTGACCGATGCACTCACCAGCGTCGGCATAAAGTCGCCACCGCCGCTAA
GCGGGGAAACGAAACTGGGCAACGCGAGAGACGACGAATCCGGCACCACG
GTGACGGAAGCGTTGCGAAAAACGAACGTTAGTTGCTCCGCCTCTTTCGA
CCTCGTGATTGCCAGCGATGTTATCTACTCGATATCGGTTGTGGAGCCAC
TTTTCGAAACGGTGGGCGCTTTGTTATTGTTGCCGGCGGCGGCGGCGGCG
GTAGGACCGGATGAAGCACTGCTGTCGCGAGGGGACTGGCGGAACGAAGG
AGAAGTAGTAGCACGATCGGGAAACAAGATGCATCATTATCATCATCATC
GAGATGGGAAGGAGCAAGGGCAACCTTCTGCTCCATTAACATCGTTGTCG
TTAGGGGGTTCATCATCATCACCAGGAGGAGGAACAAGCAGCGATGACAC
TGTTGTCGATGACATGCTAGCAGGAATGGACTATACAGATTCACTACTAC
CGTCGCCGCCGCCTCCACCGCCTCCACCGCGAACGTCAACACAAGGGGGT
TGTAATAACCACCTTCCACACACACCACCACTACCACCACCCGGAGACAG
CGGCAACTCTCGACCCACCGCTGCTGCTACAGAACACTGCTGCCGGCGAT
ATTTCCCTGTCTCCACGTGCACAAACGCCGCTGTTGCCGTCACACCGGCG
CCAGTATTCGTCATGTCACAGAGCTTCGTGTACGAGCCAGAGACCGAAGA
AGCGATAGCGCGAGCCTGCGAGCGGCATGGTTTATTGCGGGAGGTTGTTT
GGGATGAATTGCAAGGTGGCAGCGGCGGCAACGGCGCAGAGGGCTTGGAG
GAGGCATCGAGGCTGAAGAGCGGTGGTGAAGGAAACGATGTCGCGGGCGA
CCACTGCGCCGACGGTGGTACGAGAAACAGTACCAGTGGCGATACAATTA
GACCCCAAAGTAGGATAGGTACGGTTGCTAGGGAGGAGAGGGAAGAGGAA
AGGGGGGCGAGACACGAGAACGACAGCGCTGATCACCTTGCTGGTGGCGG
TGATGATGGCGGTGCTGAGAGCGTGGTGCAGCGGGCAGGGACCAAGTTGC
AGCTCTTCTGGCGCGCGTGACGTGTTTCGTGCTTGTATGTGTGTGTGTGT
TTCGCAAGTCTTTCGAGAGACCTGAGCATTTACCGTGTTACGATGTAGGG
TTGAAGAAGTTTTTGAAATACACACATGGTGTCAAT
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Coding sequence (CDS) from alignment at H-paniculata_contig10756:3655..7840-

>mRNA_H-paniculata_contig10756.481.1 ID=mRNA_H-paniculata_contig10756.481.1|Name=mRNA_H-paniculata_contig10756.481.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3114bp|location=Sequence derived from alignment at H-paniculata_contig10756:3655..7840- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGTTCATGTTCGACAGCGCTCTTCCCAAATCAAGGCGGATTTTTCA
CTTTGGCAATGACATGACGGTCGCTGTTAGATTGGTCGACGATGATCCGG
GTGCTGTACAGATGGGGTTCATGTTCGACAGCGCTCTTCCCAAATCAAGG
CGGATTTTTCACTTTGGCAATGACATGACGGTCGCTGTTAGATTGGTCGA
CGATGATCCGGGTGCTGTACAGTCCGGTCACTATGTGTGGCCCGCGGCGC
CGGCGCTCTGCTCCTACCTGATCAGCCGCTGGCCGCAGCTACCACATGGG
ACAGTGCTCGAGCTTGGCGCTGGATGCGGCCTGGCCGGTCTTGTAGCGGC
ACAACTTCCGGGTACAAGAGTCGTAATTTTTACCGATCACGACGCAGTCC
GGTCACTATGTGTGGCCCGCGGCGCCGGCGCTCTGCTCCTACCTGATCAG
CCGCTGGCCGCAGCTACCACATGGGACAGTGCTCGAGCTTGGCGCTGGAT
GCGGCCTGGCCGGTCTTGTAGCGGCACAACTTCCGGGTACAAGAGTCGTA
ATTTTTACCGATCACGACGCAGGCGTTTTAGATCTCATTCGAGAAAGTAT
TGCAGAGCAGAGCGGGGGCAGTAGCCCCGCCGCACTGGATCGAAGAATTG
CCAAGAAGGCGGTAGCGGCGGCGGCATGTGCAAGATTGCCTTGGGGTCCT
GTCGGCGTTTTAGATCTCATTCGAGAAAGTATTGCAGAGCAGAGCGGGGG
CAGTAGCCCCGCCGCACTGGATCGAAGAATTGCCAAGAAGGCGGTAGCGG
CGGCGGCATGTGCAAGATTGCCTTGGGGTCCTGTCGGCAAGGCCGAGCAC
ACCGCCTTGACCGATGCACTCACCAGCGTCGGCATAAAGTCGCCACCGCC
GCTAAGCGGGGAAACGAAACTGGGCAACGCGAGAGACGACGAATCCGGCA
CCACGGTGACGGAAGCGTTGCGAAAAACGAACGTTAGTTGCTCCGCCTCT
TTCGACCTCGTGATTGCCAGCGATGTTATCTACTCGATATCGGTTGTGGA
GCCACTTTTCGAAACGGTGGGCGCTTTGTTATTGTTGCCGGCGGCGGCGG
CGGCGGTAGGACCGGATGAAGCACTGCTGTCGCGAGGGGACTGGCGGAAC
GAAGGAGAAGTAGTAGCACGATCGGGAAACAAGATGCATCATTATCATCA
TCATCGAGATGGGAAGGAGCAAGGGCAACCTTCTGCTCCATTAACATCGT
TGTCGTTAGGGGGTTCATCATCATCACCAGGAGGAGGAACAAGCAGCGAT
GACACTGTTGTCGATGACATGCTAGCAGGAATGGACTATACAGATTCACT
ACTACCGTCGCCGCCGCCTCCACCGCCTCCACCGCGAACGTCAACACAAG
GGGGTTGTAATAACCACCTTCCACACACACCACCACTACCACCACCCGGA
GACAGCGGCAACTCTCGACCCACCGCTGCTGCTACAGAACACTGCTGCCG
GCGATATTTCCCTGTCTCCACGTGCACAAACGCCGCTGTTGCCGTCACAC
CGGCGCCAGTATTCGTCATGTCACAGAGCTTCGTGTACGAGCCAGAGACC
GAAGAAGCGATAGCGCGAGCCTGCGAGCGGCATGGTTTATTGCGGGAGGT
TGTTTGGGATGAATTGCAAGGTGGCAGCGGCGGCAACGGCGCAGAGGGCT
TGGAGGAGGCATCGAGGCTGAAGAGCGGTGGTGAAGGAAACGATGTCGCG
GGCGACCACTGCGCCGACGGTGGTACGAGAAACAGTACCAGTGGCGATAC
AATTAGACCCCAAAGTAGGATAGGTACGGTTGCTAGGGAGGAGAGGGAAG
AGGAAAGGGGGGCGAGACACGAGAACGACAGCGCTGATCACCTTGCTGGT
GGCGGTGATGATGGCGGTGCTGAGAGCGTGGTGCAGCGGGCAGGGACCAA
GTTGCAGCTCTTCTGGCGCGCGTGAGCAAGGCCGAGCACACCGCCTTGAC
CGATGCACTCACCAGCGTCGGCATAAAGTCGCCACCGCCGCTAAGCGGGG
AAACGAAACTGGGCAACGCGAGAGACGACGAATCCGGCACCACGGTGACG
GAAGCGTTGCGAAAAACGAACGTTAGTTGCTCCGCCTCTTTCGACCTCGT
GATTGCCAGCGATGTTATCTACTCGATATCGGTTGTGGAGCCACTTTTCG
AAACGGTGGGCGCTTTGTTATTGTTGCCGGCGGCGGCGGCGGCGGTAGGA
CCGGATGAAGCACTGCTGTCGCGAGGGGACTGGCGGAACGAAGGAGAAGT
AGTAGCACGATCGGGAAACAAGATGCATCATTATCATCATCATCGAGATG
GGAAGGAGCAAGGGCAACCTTCTGCTCCATTAACATCGTTGTCGTTAGGG
GGTTCATCATCATCACCAGGAGGAGGAACAAGCAGCGATGACACTGTTGT
CGATGACATGCTAGCAGGAATGGACTATACAGATTCACTACTACCGTCGC
CGCCGCCTCCACCGCCTCCACCGCGAACGTCAACACAAGGGGGTTGTAAT
AACCACCTTCCACACACACCACCACTACCACCACCCGGAGACAGCGGCAA
CTCTCGACCCACCGCTGCTGCTACAGAACACTGCTGCCGGCGATATTTCC
CTGTCTCCACGTGCACAAACGCCGCTGTTGCCGTCACACCGGCGCCAGTA
TTCGTCATGTCACAGAGCTTCGTGTACGAGCCAGAGACCGAAGAAGCGAT
AGCGCGAGCCTGCGAGCGGCATGGTTTATTGCGGGAGGTTGTTTGGGATG
AATTGCAAGGTGGCAGCGGCGGCAACGGCGCAGAGGGCTTGGAGGAGGCA
TCGAGGCTGAAGAGCGGTGGTGAAGGAAACGATGTCGCGGGCGACCACTG
CGCCGACGGTGGTACGAGAAACAGTACCAGTGGCGATACAATTAGACCCC
AAAGTAGGATAGGTACGGTTGCTAGGGAGGAGAGGGAAGAGGAAAGGGGG
GCGAGACACGAGAACGACAGCGCTGATCACCTTGCTGGTGGCGGTGATGA
TGGCGGTGCTGAGAGCGTGGTGCAGCGGGCAGGGACCAAGTTGCAGCTCT
TCTGGCGCGCGTGA
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