mRNA_H-paniculata_contig10747.474.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10747.474.1 vs. uniprot
Match: D8LI98_ECTSI (Stc1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI98_ECTSI) HSP 1 Score: 169 bits (428), Expect = 2.320e-49 Identity = 113/201 (56.22%), Postives = 128/201 (63.68%), Query Frame = 1 Query: 49 MDAVGGSWAGTFACSLCRRKRLTAEAFSGSQLRQLRERKLSEEKLKCKECVTAAQTAERESAYKARQKTGAEDEAGTG--ESLLCSVCEQKQ-PPTCFTNTQARKPDSARKCRNCSAKLESAEAANSKAIREAKMADAQTAAAAAAKMPKGXXXXXXRLKAASAECAAEAEKVTGLKPLVGAGKRGRGGRGRG-SWRGRGS 639 MDAVGGSWAGT ACS CRRKRLTAE+FS +QLR+LRE KL+E+K+KCKECV A T ERE +A Q + A G G E L CS C+QK P + FTNTQARKPD++RKCR+ +PKG RLKAASAECA EAEKVTGLKPLVGAGKRG G GRG +WRGR S Sbjct: 1 MDAVGGSWAGTLACSECRRKRLTAESFSANQLRKLREGKLAEDKVKCKECVAKAATEERE---RASQNSKASSNGGEGKDEPLSCSACKQKSLPRSSFTNTQARKPDASRKCRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPKGAAGAAARLKAASAECAREAEKVTGLKPLVGAGKRGGRGPGRGRTWRGRAS 198
BLAST of mRNA_H-paniculata_contig10747.474.1 vs. uniprot
Match: A0A6H5KHQ9_9PHAE (Stc1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ9_9PHAE) HSP 1 Score: 131 bits (330), Expect = 2.420e-34 Identity = 72/112 (64.29%), Postives = 87/112 (77.68%), Query Frame = 1 Query: 49 MDAVGGSWAGTFACSLCRRKRLTAEAFSGSQLRQLRERKLSEEKLKCKECVTAAQTAERESAYKARQKTGAEDEAGTGESLLCSVCEQKQ-PPTCFTNTQARKPDSARKCRN 381 MDAVGGSWAGT ACS CRRKRLTAE+FS +QLR+LRE KL+E+K+KCKECV A T ERE A + K + D G E L CSVC+QK+ P + FTNTQARKP+++RKCR+ Sbjct: 20 MDAVGGSWAGTLACSECRRKRLTAESFSANQLRKLREGKLAEDKVKCKECVAKAATEERERASE-NSKASSNDGEGKDEPLSCSVCKQKRLPRSSFTNTQARKPETSRKCRD 130
BLAST of mRNA_H-paniculata_contig10747.474.1 vs. uniprot
Match: A0A6U1C738_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1C738_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.590e-18 Identity = 70/171 (40.94%), Postives = 92/171 (53.80%), Query Frame = 1 Query: 67 SWAGTFACSLCRRKRLTAEAFSGSQLRQLRERKLSEEKLKCKECVTAAQTAERESAYKARQKTGAEDEAGTGESLLCSVCEQKQPPTCFTNTQARKPDSARKCRNCSAKLESAEAANSKAIREAKMADAQTAAAAAAKMPKGXXXXXXRLKAASAECAAEAEKVTGLKPLV 579 SWAG F CS CRRKRL A FS +QL + R+ + L CK CV A Q +ER +A +T A AG E C+ C+++ P F Q RK ++ C A +E+AEA+ S A +AK + AK + + AA+AECAAEAE VTGLKP+V Sbjct: 3 SWAGDFECSRCRRKRLIAAEFSRAQLDKARKAQGGVIPLTCKRCVEADQASERAAAA---AQTHAMPAAGEDELHECAACKERLPALRFNKNQLRKKGPGKQ--RCQACVEAAEASASSAAGDAKR-EKLAGLRQDAKRAEAVGSAVDKAVAAAAECAAEAELVTGLKPMV 167
BLAST of mRNA_H-paniculata_contig10747.474.1 vs. uniprot
Match: A0A7S0JH32_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JH32_9EUKA) HSP 1 Score: 84.7 bits (208), Expect = 8.100e-17 Identity = 71/192 (36.98%), Postives = 101/192 (52.60%), Query Frame = 1 Query: 70 WAGTFACS-LCRRKRLTAEAFSGSQLRQLRERKLSEEKLKCKECVTAAQTAERESAYKARQKTGAEDEAGTG---ESLLCSVCEQKQPPTCFTNTQARKPDSARKCRNCSAKLESAEAANSKAIREAKMADAQTAAAAAAKMPKGXXXXXXRLKAASAECAAEAEKVTGLKPLVGAGKRGRGGRGRGSWRGR 633 WAG+F C+ C RKRL FS + L + RK + ++CK CV A ERE A K + + AE G + CS CE P + F TQ K ++C+ C + E +A + ++ +ADA+ AA + + +L A++ A EAE+VTGLKP++ G+ GRG RGRGSWRGR Sbjct: 4 WAGSFDCAGECHRKRLVGSEFSKAMLEK--RRKDASLPIRCKSCVEEAAVREREQAAKRQAERIAEGAGGDKFCQDQHTCSACEIVLPASAFNRTQLSKGTEKQRCQQCVGRSEQEASAAVEERQKVALADAK----AALRRAEASGSVVEKLTASATHAALEAERVTGLKPVI-LGRGGRG-RGRGSWRGR 187
BLAST of mRNA_H-paniculata_contig10747.474.1 vs. uniprot
Match: A0A7S4C1J3_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C1J3_CHRCT) HSP 1 Score: 81.6 bits (200), Expect = 1.700e-15 Identity = 68/188 (36.17%), Postives = 96/188 (51.06%), Query Frame = 1 Query: 67 SWAGTFACSLCRRKRLTAEAFSGSQLRQLRERKLSEEKLKCKECVTAAQTAERESAYK--ARQKTGAEDEAGTGESLLCSVCEQKQPPTCFTNTQARKPDSARKCRNCSAKLESAEAANSKAIREAKMADAQTAAAAAAKMPKGXXXXXXRLKAASAECAAEAEKVTGLKPLV-------GAGKRGRG 603 +WAG F C+ C R+RL FS + L + +RK + L+CK+CV +A AERE A K A + A+DE T CS C+ P + F TQ K ++C+ C A E S+A E + A + A A + + +L ++A A EAE+VTGLKP+V GA +RGRG Sbjct: 31 AWAGNFDCASCGRQRLIGAEFSKNMLEK--KRKDPKATLRCKQCVESAAAAEREQAAKRQAERAPAADDEKHT-----CSACKAALPTSAFNRTQLSKGPEKQRCQQCVAASEQ----ESQAAVEERQRKALSEAKTAMQRAEASGSVAEKLATSAAHAALEAERVTGLKPVVLGRGRTRGASRRGRG 207
BLAST of mRNA_H-paniculata_contig10747.474.1 vs. uniprot
Match: A0A7S0Q163_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q163_9EUKA) HSP 1 Score: 78.6 bits (192), Expect = 1.720e-14 Identity = 74/193 (38.34%), Postives = 98/193 (50.78%), Query Frame = 1 Query: 70 WAGTFACS-LCRRKRLTAEAFSGSQLRQLRERKLSEEKLKCKECVTAAQTAERESAYKARQKTGAEDEAGTG----ESLLCSVCEQKQPPTCFTNTQARKPDSARKCRNCSAKLESAEAANSKAIREAKMADAQTAAAAAAKMPKGXXXXXXRLKAASAECAAEAEKVTGLKPLVGAGKRGRG-GRGRGSWRG 630 WAG F C+ C RKRL FS S L R R+ ++CK CV A AERE A K RQ A +EA E CSVC+ P + F +Q K ++C+ C A E +A + ++A +A+A+ A A + +L ++ A EAE+VTGLKP+V GRG RGRGSWRG Sbjct: 4 WAGNFECAGECGRKRLVGSEFSKSMLD--RRRRDLNAPIRCKTCVEEAAAAEREQAAK-RQTQRAANEASADTAADEQHTCSVCQLGLPASAFNRSQLSKGAGKQRCQKCVATNEQEASAAVEERQKAALAEAKVAMQRA----EASGSVAQKLATSATHAALEAERVTGLKPVV----LGRGRSRGRGSWRG 185
BLAST of mRNA_H-paniculata_contig10747.474.1 vs. uniprot
Match: A0A7S4N0F2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N0F2_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 3.270e-14 Identity = 69/186 (37.10%), Postives = 92/186 (49.46%), Query Frame = 1 Query: 46 SMDAVGGSWAGTFACS-LCRRKRLTAEAFSGSQLRQLRERKLSEEKLKCKECVTAAQTAERESAYKARQKTGAEDEAGTGE------SLLCSVCEQKQPPTCFTNTQARKPDSARKCRNCSAKLESAEAANSKAIREAK--MADAQTAAAAAAKMPKGXXXXXXRLKAASAECAAEAEKVTGLKPL 576 S V WAG F CS CRRKRL FS L + R + LKCK+C+ AA+TAERE+A K R A+ A G + C+ C+++ P + F Q K +CR C K + EA+ S+ ++ + MA A+ A A + P LKA S A EAE VTGLKP+ Sbjct: 3 STPVVTDKWAGNFDCSGPCRRKRLVGSEFSKKGLERHRR---TGGPLKCKQCIAAAETAEREAAAKKRAAATADGGAPAGSCGDGDATFACAACKKELPQSAFNRNQVSKGPGKARCRACVEKAVAEEASASQRGKDERIEMAKAKVAEANSRGSPVEI------LKAESELAALEAEHVTGLKPV 179
BLAST of mRNA_H-paniculata_contig10747.474.1 vs. uniprot
Match: R1C857_EMIHU (Stc1 domain-containing protein n=3 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C857_EMIHU) HSP 1 Score: 77.8 bits (190), Expect = 3.490e-14 Identity = 77/202 (38.12%), Postives = 94/202 (46.53%), Query Frame = 1 Query: 49 MDAVGGS------WAGTFACSLCRRKRLTAEAFSGSQLRQLRERKLSEEKLKCKECVTAAQTAERESAYKARQKTGAEDEAGTGESLLCSVCEQKQPPTCFTNTQARKPDSARKCRNCSAKLESAEAANSKAIREAKMADAQTAAAAAAKMPKGXXXXXXRLKAASAECAAEAEKVTGLKPLVGAGKRGRGGRGRGSWRGRG 636 M + GG WAG FAC C RKRLTA AFS R + + + LKC CV AA E ++CS C + +P FT Q +K AR C +C A +A EA+ +A+ AA A + RL AAS A E E+VTGLKP+V GRGGRGRGSWRGRG Sbjct: 1 MSSTGGGADGRSDWAGDFACVECGRKRLTAAAFSK---RSIERHRTANVPLKCTACVEAAAAXXXXXXXXXXXXXXXXXXXXXXE-VVCSACCKPRPAGDFTRAQLQKGAKAR-CGDCVAAAGAAXXXAPSDAWEARYKEAKEAARKA----EAVGTAAARLAAASKVAALEGERVTGLKPVV----LGRGGRGRGSWRGRG 189
BLAST of mRNA_H-paniculata_contig10747.474.1 vs. uniprot
Match: A0A8J5Y2S6_DIALT (Stc1 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5Y2S6_DIALT) HSP 1 Score: 72.8 bits (177), Expect = 2.280e-12 Identity = 67/185 (36.22%), Postives = 88/185 (47.57%), Query Frame = 1 Query: 58 VGGSWAGTFACSLCRRKRLTAEAFSGSQLRQLRERKLSEEKLKCKECVTAAQTAERESAYKARQKTGAEDEAGTGESLLCSVCEQKQPPTCFTNTQARKPDSARKCRNCSAKLESAEAANSKAIREAKMADAQTAAAAAAKMPKGXXXXXXRLKAASAECAAEAEKVTGLKPLV-GAGK-RGRGG 606 + +WAG F C+ C RKRL FS + L R R+ L+C CV AA A+D AG +CS C + P F Q K ++C+ C A E A AA+ A++A A+ A A + ++ AASA A EAEKVTGLKP+V G G+ RGRGG Sbjct: 1 MAAAWAGNFECTACGRKRLIGSEFSKAALE--RHRRDPTAPLRCVACVEAAAAVXXXXXXXXXXLATADDAAGAEH--VCSACARSLPAAAFNRNQLSKGGEKQRCQTCVADAEQAAAADGAEKYAARLAAARQAMQRA----EASGSAAEKVVAASAYSAIEAEKVTGLKPVVLGRGRARGRGG 177
BLAST of mRNA_H-paniculata_contig10747.474.1 vs. uniprot
Match: A0A7S3UZR7_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3UZR7_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 4.090e-9 Identity = 65/187 (34.76%), Postives = 95/187 (50.80%), Query Frame = 1 Query: 40 LSSMDAVGGSWA---GTFACSLCRRKRLTAEAFSGSQLRQLRERKLSEE--KLKCKECVTAAQTAERESA-YKARQKTGAEDEAGTG-ESLLCSVCEQKQPPTCFTNTQARKPDSAR--KCRNCSAKLESAE--AANSKAIREAKMADAQTAAAAAAKMPKGXXXXXXRLKAASAECAAEAEKVTGL 567 ++S ++V W G+FAC +C+RKRL A AFS +Q++ R ++ + KCKECV A ER +A + R + G+ D++ E L C C + F+ +QA K + KC+ C A+L+ AE A +K + Q AKM KG RL A E A +AEKVTG+ Sbjct: 1 MASSNSVSTDWTLSPGSFACLVCKRKRLPAVAFSKNQIQIARSNSVNNDDYSAKCKECVEKASQVERNAAALRKRNENGSGDQSSAEMEVLECKKCSKTLAIQEFSRSQAEKIKHCKPGKCKLCVAELKVAENTAVAAKRNNNTEKLHQQ------AKM-KGKHGAGARLALACKETAEQAEKVTGI 180 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10747.474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10747.474.1 >prot_H-paniculata_contig10747.474.1 ID=prot_H-paniculata_contig10747.474.1|Name=mRNA_H-paniculata_contig10747.474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=215bp LSQATCVVLTDPGLSSMDAVGGSWAGTFACSLCRRKRLTAEAFSGSQLRQback to top mRNA from alignment at H-paniculata_contig10747:4598..6131- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10747.474.1 ID=mRNA_H-paniculata_contig10747.474.1|Name=mRNA_H-paniculata_contig10747.474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1534bp|location=Sequence derived from alignment at H-paniculata_contig10747:4598..6131- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10747:4598..6131- >mRNA_H-paniculata_contig10747.474.1 ID=mRNA_H-paniculata_contig10747.474.1|Name=mRNA_H-paniculata_contig10747.474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1290bp|location=Sequence derived from alignment at H-paniculata_contig10747:4598..6131- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |