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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 632 |
| Cds size | 609 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1074.469.1 >prot_H-paniculata_contig1074.469.1 ID=prot_H-paniculata_contig1074.469.1|Name=mRNA_H-paniculata_contig1074.469.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=203bp
MPPPFCFSRRRLLPTRKEECVGMARGSSDVAGRTSSSMLKRTGLCPPRHP
QGEEEGGLSRKACVWGPTRVATAAAIAGGRGGVGSSRGSYSRENTLASRH
SMTGRPCVYLAACSLALLAFMSDPGASFQAAAPVGARGTRDNSRKHPRAH
APCREPAGGELLHGSFTGRLDRESRQRCTFWGLGWTCAPPRQGPLEATPS
TGG back to topmRNA from alignment at H-paniculata_contig1074:23544..26293+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1074.469.1 ID=mRNA_H-paniculata_contig1074.469.1|Name=mRNA_H-paniculata_contig1074.469.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2750bp|location=Sequence derived from alignment at H-paniculata_contig1074:23544..26293+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGCGATCCTTCTCAAAAGCCGTCATGCCACCACCATTTTGTTTTTCTCGA
CGACGATTGTTGCCTACAAGGAAGGAGGAGTGTGTGGGAATGGCGCGGGG
CAGCTCAGACGTAGCAGGGCGCACAAGTAGCAGCATGCTAAAGAGAACAG
GACTATGCCCACCAAGGCATCCCCAAGGAGAAGAGGAAGGGGGTCTCTCA
AGGAAAGCCTGTGTGTGGGGACCCACGAGAGTAGCTACTGCAGCAGCGAT
AGCGGGAGGTCGGGGAGGTGTTGGCAGCAGCAGGGGTTCTTACTCTCGAG
AGAACACACTGGCGTCGCGTCATAGCATGACCGGCCGACCATGTGTGTAC
CTGGCCGCGTGTTCTCTGGCATTACTTGCGTTTATGAGCGACCCTGGGGC
GTCTTTTCAGGTGCGAGCTAGGATAGTAGAGCCTACTTTGATTCGTGTGT
TTCGCAGTCAAGGCGGGTTCAAACGCGTCTGTCGTTGTGTGTTTACGAAG
ACGTTAGTTCCCAGGCGTATTATGCTACAATACCACGTTTTTGACATGTT
TCACGCGCACAGACCATGAGTGTAAACAGTCAGTTTTATCATGCAAACTT
GTGCAAACTGCAGTCGAAAGACAGACACCGTCCCCCAGTTCAACATGAGC
CATAGCAGGACACCTTTCCCCCTCTCCGTAAACGAAAGTGATAACGTCGC
TTTACACAACCTAGCCCCACAACTAACCTAGCCTACCCGATACACCTTGT
TACGAACCATTACGAATTAGTCATTCTCATCTGCTCTCTAGAGACAATCT
CAAAGCCAGGTGTTCAAACACCTTGGCCTCTCTCTGCCTCTCCGCCGCCC
ATGTTTGTCGTTGTTTACTCGTGCTCTTTTCTGTCGATGTAAATCAGGCC
GCAGCACCTGTGGGTGCGCGGGGGACACGTGATAACTCGAGAAAACACCC
ACGCGCCCACGCTCCGTGTCGAGAACCGGCTGGCGGCGAGCTTTTGCATG
GCAGCTTCACTGGTCGGCTGGATCGAGAGGTGAATGATCGAAGAGATATG
TAACACATATCATTCAGTATCCCCGTGTTCGCCCAACCGCACATGCCTTC
AGTCAGTACATAACACCCATCAGTGCCTGTTCTGTTCTATTATGTGTCGG
CATGACACTTCCGCTGGGTTGTTTGCTGCGAACGTAGACATGCCATGTAG
GGATTTGCGGTGTATGTATGCCTCGTGCACGGGCATCGCGCGCTTGTGGA
GGGTCAACTCCTCGAGTGTAAACATGTACACTAGGACAGTCTGCAGCAAA
AGTATTTATTGGTGATGCTACTGACTGTACCCACTGTACAGATGGACGAG
CGAGCCAGGTTTGTGAAGTAGATATTGTTTTGTGACGGTATGGATAGGGC
TTACGCGGTGCATGCGGCGTGAAATCTCAGGCTATGAGCAACTCCTGACC
TTGCATTGTAGGAACATTTGTTCTTCGGTGTTGTTGTAGTGCCTGCTGTC
GGAAAGCCGCGCAATATCTTACTGCATGGTCTGTATACCCCAGTGTTCAA
TAACACAGAATCCATCCTACTCCCGATGTCTCCGTTGCTTATCCCTGGAA
ATAAACACTGCATCGCCATCCGTCATGCTGCAATAAACATTCAGTAGCTG
CTACAGTCCGTCGGAAATAGTCGCTACTTTGCGGCACTATTCTGTCTGCA
GCAGGAACTCAGCAGGCACGAATGCTCCAGGCTGAGCTGTATACTCGTCA
TGACTGTACACTAATCAAACATAAACATGAGATAGGCAGCAAACAGCAGT
GCAGTATTTATGGTGTACCATATGAAGGGCTCTTTTCCCCACAACAGCAG
AGCCACTAGTGTCTGTTCTTTAGCTACCATCTGTGAGTGTCAAACGCACG
TTTCTATCGGGATCCGCAGTTTCTACCCTCTAAGGATGTGATTTTGCACG
AGCGAACACAATCGATTTGTTCAGAGTCGGCGCGGTTTTCTTCTTCCATA
TTTTCTGATTTTCTGATTCAATACGACCTTCGAGAGATCGCAGTATATCA
CGATACCAAGCAGTATAGTATCTTCGTTTTCATCGAAGCTGTTGTTAGGC
AGTGATGTGGTCGAGAAGCATCGGAATACATAACCTGGTCGACTGTGCCG
AGGGAGGACAAAGCTGATTTTTTTGCTATTTTCGTACGAGGATTTAGCTC
GATTTATCCGCCTCCCCGGACTTACAGCGAAACTTCAAGAAGAATCTCCA
AGCAACAAATATCTTAATTGTGGAAGATGATTCGTTCTCGCGACACACTG
TAGTCTTCCTTCATGGTGACCAAGCTCATCAAGGTTCGATGTTTTCAGAG
TTTGAGTCATGAGTGTGAGGTCTAACTGTCATGGGCAGTGAAGTGGAGCA
CCGAAATCCAGTCCACATTCAACTGCTTACGCTCTTATCTTCAGTGTAGA
TTTTAGATGGTGGGGAGCTTAGTCCTGTCATCAATTCCTTGAAACTATTT
GGAGGCTTCTCGAGAGTTTATTTATTATGATGCAGCTTGCTACAGCTACC
CTCGACATGCAGGTGAAAAATAAACTGGATGCACCTCAAAAATGGACTAT
GAGCAAGTTTTGCTGATGCTGCCACGTTGCCCCCCTCCCCCCACCCCCCC
CCCCCTTCCGTCTAGACAACGTTGCACCTTCTGGGGCTTAGGTTGGACGT
GCGCGCCCCCCCGACAAGGCCCGTTAGAGGCGACCCCATCAACAGGGGGG
back to topCoding sequence (CDS) from alignment at H-paniculata_contig1074:23544..26293+ >mRNA_H-paniculata_contig1074.469.1 ID=mRNA_H-paniculata_contig1074.469.1|Name=mRNA_H-paniculata_contig1074.469.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1218bp|location=Sequence derived from alignment at H-paniculata_contig1074:23544..26293+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCACCACCATTTTGTTTTTCTCGACGACGATTGTTGCCTACAAGGAA
GGAGGAGTGTGTGGGAATGGCGCGGGGCAGCTCAGACGTAGCAGGGCGCA
CAAGTAGCAGCATGCTAAAGAGAACAGGACTATGCCCACCAAGGCATCCC
CAAGGAGAAGAGGAAGGGGGTCTCTCAAGGAAAGCCTGTGTGTGGGGACC
CACGAGAGTAGCTACTGCAGCAGCGATAGCGGGAGGTCGGGGAGGTGTTG
GCAGCAGCAGGGGTTCTTACTCTCGAGAGAACACACTGGCGTCGCGTCAT
AGCATGACCGGCCGACCATGTGTGTACCTGGCCGCGTGTTCTCTGGCATT
ACTTGCGTTTATGAGCGACCCTGGGGCGTCTTTTCAGATGCCACCACCAT
TTTGTTTTTCTCGACGACGATTGTTGCCTACAAGGAAGGAGGAGTGTGTG
GGAATGGCGCGGGGCAGCTCAGACGTAGCAGGGCGCACAAGTAGCAGCAT
GCTAAAGAGAACAGGACTATGCCCACCAAGGCATCCCCAAGGAGAAGAGG
AAGGGGGTCTCTCAAGGAAAGCCTGTGTGTGGGGACCCACGAGAGTAGCT
ACTGCAGCAGCGATAGCGGGAGGTCGGGGAGGTGTTGGCAGCAGCAGGGG
TTCTTACTCTCGAGAGAACACACTGGCGTCGCGTCATAGCATGACCGGCC
GACCATGTGTGTACCTGGCCGCGTGTTCTCTGGCATTACTTGCGTTTATG
AGCGACCCTGGGGCGTCTTTTCAGGCCGCAGCACCTGTGGGTGCGCGGGG
GACACGTGATAACTCGAGAAAACACCCACGCGCCCACGCTCCGTGTCGAG
AACCGGCTGGCGGCGAGCTTTTGCATGGCAGCTTCACTGGTCGGCTGGAT
CGAGAGCCGCAGCACCTGTGGGTGCGCGGGGGACACGTGATAACTCGAGA
AAACACCCACGCGCCCACGCTCCGTGTCGAGAACCGGCTGGCGGCGAGCT
TTTGCATGGCAGCTTCACTGGTCGGCTGGATCGAGAGTCTAGACAACGTT
GCACCTTCTGGGGCTTAGGTTGGACGTGCGCGCCCCCCCGACAAGGCCCG
TTAGAGGCGACCCCATCAACAGGGGGGGTCTAGACAACGTTGCACCTTCT
GGGGCTTAGGTTGGACGTGCGCGCCCCCCCGACAAGGCCCGTTAGAGGCG
ACCCCATCAACAGGGGGG back to top
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