mRNA_H-paniculata_contig10733.464.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10733.464.1 vs. uniprot
Match: D7FZX8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZX8_ECTSI) HSP 1 Score: 133 bits (334), Expect = 9.410e-35 Identity = 106/133 (79.70%), Postives = 115/133 (86.47%), Query Frame = 1 Query: 4 CPLFTFAAAAMSLAELPANQKNDLIVSLAALLCEDASVALTAENLTSVVKATGNDIPAYYPTLFAAFLEKSEGCAQFCKMSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMGGGMDMFXXXXEGGGDY 402 C F + MSL+ELPA QKND++VSLAALL EDA LTAEN+++VV AT N++PAYYPTLFAA LEKSEGCA FCKMSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DMGGGMDMFXXX EGGGDY Sbjct: 28 CSPVPFVSLIMSLSELPAPQKNDMVVSLAALLLEDAGSVLTAENISAVVAATKNEVPAYYPTLFAAMLEKSEGCAMFCKMSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFXXXDEGGGDY 160
BLAST of mRNA_H-paniculata_contig10733.464.1 vs. uniprot
Match: A0A6H5KQL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQL7_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 2.670e-21 Identity = 88/110 (80.00%), Postives = 96/110 (87.27%), Query Frame = 1 Query: 73 LIVSLAALLCEDASVALTAENLTSVVKATGNDIPAYYPTLFAAFLEKSEGCAQFCKMSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DMGGGMDMFXXXXEGGGD 399 ++VSLAALL EDA LTAEN+++VV AT N++PAYYPTLFAA LEKSEGCA FCKMSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DMGGGMDMF GGG+ Sbjct: 1 MVVSLAALLLEDAGSVLTAENISAVVAATKNEVPAYYPTLFAAMLEKSEGCAMFCKMSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMF-----GGGE 105
BLAST of mRNA_H-paniculata_contig10733.464.1 vs. uniprot
Match: A0A835YLZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLZ6_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 6.720e-15 Identity = 38/67 (56.72%), Postives = 52/67 (77.61%), Query Frame = 1 Query: 34 MSLAELPANQKNDLIVSLAALLCEDASVALTAENLTSVVKATGNDIPAYYPTLFAAFLEKSEGCAQF 234 M+ AEL QK++++VSLAALLCEDA V L+AENL S V A+GN + Y+ +LFA++LEK+ GC +F Sbjct: 1 MAFAELTEGQKSEMVVSLAALLCEDAGVELSAENLNSAVSASGNKVAPYWTSLFASYLEKAGGCEKF 67
BLAST of mRNA_H-paniculata_contig10733.464.1 vs. uniprot
Match: A0A6V1KRU0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1KRU0_HETAK) HSP 1 Score: 75.9 bits (185), Expect = 1.560e-13 Identity = 37/68 (54.41%), Postives = 52/68 (76.47%), Query Frame = 1 Query: 34 MSLAELPANQKNDLIVSLAALLCEDASVALTAENLTSVVKATGNDIPAYYPTLFAAFLEKSEGCAQFC 237 MSLAEL K +L+VSLA+L+ D+ L+AENL +V+KA+GN + +Y+ +LFA+FLEKSEG +FC Sbjct: 1 MSLAELSGAAKEELVVSLASLVVADSDADLSAENLEAVIKASGNSVASYWTSLFASFLEKSEGVEKFC 68
BLAST of mRNA_H-paniculata_contig10733.464.1 vs. uniprot
Match: W7TDP6_9STRA (60s acidic ribosomal protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDP6_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 6.160e-12 Identity = 33/63 (52.38%), Postives = 50/63 (79.37%), Query Frame = 1 Query: 34 MSLAELPANQKNDLIVSLAALLCEDASVALTAENLTSVVKATGNDIPAYYPTLFAAFLEKSEG 222 MSLAEL QK ++++SL+ALL +D+ V ++AENL +V+KA+GN + AYYP L+A+ +EK+ G Sbjct: 1 MSLAELSPAQKEEMVISLSALLLQDSGVDMSAENLDAVIKASGNTVAAYYPALYASLIEKAGG 63
BLAST of mRNA_H-paniculata_contig10733.464.1 vs. uniprot
Match: A0A7S2UUV6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUV6_9STRA) HSP 1 Score: 70.5 bits (171), Expect = 1.580e-11 Identity = 34/68 (50.00%), Postives = 51/68 (75.00%), Query Frame = 1 Query: 34 MSLAELPANQKNDLIVSLAALLCEDASVALTAENLTSVVKATGNDIPAYYPTLFAAFLEKSEGCAQFC 237 M+L++L K +++VSLAAL+ D+ V ++A+NL +VV A+GNDI Y+ TLFA+FLEK+ G +FC Sbjct: 1 MALSDLSGAAKEEMVVSLAALVLADSGVDMSADNLNAVVSASGNDIAPYWSTLFASFLEKAGGVDKFC 68
BLAST of mRNA_H-paniculata_contig10733.464.1 vs. uniprot
Match: A0A482S1F3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1F3_9ARCH) HSP 1 Score: 65.9 bits (159), Expect = 3.290e-10 Identity = 30/58 (51.72%), Postives = 44/58 (75.86%), Query Frame = 1 Query: 61 QKNDLIVSLAALLCEDASVALTAENLTSVVKATGNDIPAYYPTLFAAFLEKSEGCAQF 234 +K+ L+VSLAALL D ++A++L+SV+ A+ N +PAYYPTLFA F+EK+ G +F Sbjct: 11 EKDQLVVSLAALLLSDVGAEISADSLSSVLSASNNTVPAYYPTLFAGFIEKAGGVDKF 68
BLAST of mRNA_H-paniculata_contig10733.464.1 vs. uniprot
Match: A0A7S3HK71_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HK71_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 3.040e-9 Identity = 29/57 (50.88%), Postives = 43/57 (75.44%), Query Frame = 1 Query: 64 KNDLIVSLAALLCEDASVALTAENLTSVVKATGNDIPAYYPTLFAAFLEKSEGCAQF 234 K+ L+ SLAA++ D+ +TAE+L +V+ A+GN +PAYY TLFA+F+EKS G +F Sbjct: 12 KDQLVTSLAAIVLSDSGADITAESLNAVIAASGNQVPAYYATLFASFIEKSGGLDKF 68
BLAST of mRNA_H-paniculata_contig10733.464.1 vs. uniprot
Match: A0A7S0QBW6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0QBW6_9EUKA) HSP 1 Score: 61.6 bits (148), Expect = 2.240e-8 Identity = 29/75 (38.67%), Postives = 52/75 (69.33%), Query Frame = 1 Query: 13 FTFAAAAMSLA-ELPANQKNDLIVSLAALLCEDASVALTAENLTSVVKATGNDIPAYYPTLFAAFLEKSEGCAQF 234 F F ++ M+L+ ++ K+ L+ SLAA++ D ++A+ + SV+ A+GN +PAYYPTL+A+++EK+ G +F Sbjct: 3 FCFVSSNMTLSYQVTGADKDQLVTSLAAIILSDCGADISADAINSVLSASGNTVPAYYPTLYASYIEKAGGLEKF 77
BLAST of mRNA_H-paniculata_contig10733.464.1 vs. uniprot
Match: A0A5D6XVR8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XVR8_9STRA) HSP 1 Score: 61.6 bits (148), Expect = 2.290e-8 Identity = 66/123 (53.66%), Postives = 81/123 (65.85%), Query Frame = 1 Query: 34 MSLAELPANQKNDLIVSLAALLCEDASVALTAENLTSVVKATGNDIPAYYPTLFAAFLEKSEGCAQFCKMSAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDMGGGMDMFXXXXEGGGDY 402 MS A+L A QK +L+ SLA L DA V L+AEN+++ + A+GN++ A+ P LFA + + + K AG XXXXXXXXXXXXXXXXXXXXXXXX DMGG MDMF GG DY Sbjct: 1 MSFADLTAIQKEELVTSLAVLAVHDAKVELSAENISAAISASGNEVSAFMPQLFADLIGRG---LKVDKFLAGPSAGGSXXXXXXXXXXXXXXXXXXXXXXXXADMGGAMDMFG----GGSDY 116 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10733.464.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10733.464.1 >prot_H-paniculata_contig10733.464.1 ID=prot_H-paniculata_contig10733.464.1|Name=mRNA_H-paniculata_contig10733.464.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp MSLAELPANQKNDLIVSLAALLCEDASVALTAENLTSVVKATGNDIPAYYback to top mRNA from alignment at H-paniculata_contig10733:2529..4915+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10733.464.1 ID=mRNA_H-paniculata_contig10733.464.1|Name=mRNA_H-paniculata_contig10733.464.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2387bp|location=Sequence derived from alignment at H-paniculata_contig10733:2529..4915+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10733:2529..4915+ >mRNA_H-paniculata_contig10733.464.1 ID=mRNA_H-paniculata_contig10733.464.1|Name=mRNA_H-paniculata_contig10733.464.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=744bp|location=Sequence derived from alignment at H-paniculata_contig10733:2529..4915+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |