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Homology
BLAST of mRNA_H-paniculata_contig10693.444.1 vs. uniprot
Match: D7FM66_ECTSI (WRNEXO (WERNER SYNDROME-LIKE EXONUCLEASE) 3\'-5\' exonuclease/ nucleic acid binding n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM66_ECTSI) HSP 1 Score: 226 bits (577), Expect = 2.450e-65 Identity = 127/240 (52.92%), Postives = 158/240 (65.83%), Query Frame = 3
Query: 792 GILLAGVGIGGDVSRLEKEYAQLRECGGVKGITDLSELAKRKVLPDRRRRGMWSLADLADEMLGVQLRKPQDLRTGNWEKRPLSVKQLEYAAGDAYAGLRLWQVMQTMPDVVVRQSTPNDDAPNAPSADKGSSRQ---NAGTLHMKGESERRD------------------SAGRVDLPRLPLAKTETHRLWHEDGLSVEAVAEVRCNKVSTVLGYIAECIEAGLPYN-----WSRLNMD 1433
G+L + G+GGDV+RLE+EY QLR GGV G+ DLSE+AKRKV P+RRRRGMWSLADL E+L ++L+KP LRTG+WEKRPLSV QL YAA DAYAGLRLWQ M MPD+V+++S N SA GS R+ NA +G+ + R +A PRLPL+K ETHRLWHEDGLSV+AVAEVRCNK +TV GY++ + GL + W+ L +D
Sbjct: 3 GLLCSRRGVGGDVNRLEREYDQLRAGGGVGGVVDLSEVAKRKVAPERRRRGMWSLADLCAEVLELELKKPASLRTGSWEKRPLSVDQLFYAAADAYAGLRLWQTMHEMPDLVLQRSDANGPRVEGTSAAAGSPRRCDVNAAAAGGEGKGQARGGVDAQPAXXGQEMATASRNAETTTRPRLPLSKLETHRLWHEDGLSVDAVAEVRCNKANTVRGYLSADLPNGLIVDRLHRSWASLRLD 242
BLAST of mRNA_H-paniculata_contig10693.444.1 vs. uniprot
Match: A0A7S0A073_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0A073_9DINO) HSP 1 Score: 120 bits (302), Expect = 6.180e-27 Identity = 97/262 (37.02%), Postives = 136/262 (51.91%), Query Frame = 3
Query: 768 LVRVLSDPGILLAGVGIGGDVSRLEKEY---------------AQLRECGG----VKGITDLSELAKRKVLPDRRRRGMWSLADLADEMLGVQLRKPQDLRTGNWEKRPLSVKQLEYAAGDAYAGLRLWQVMQTM-PDVVVRQSTP--NDDAPNAPSADKGSSRQNAGTLHMKGESERRDSAGRVDLPR-LPLAKTETHRLWHEDGLSVEAVAEVRCNKVSTVLGYIAECIEAGLPYNWSRLNMDPATEVEIARALFAATAS 1484
+ +L P +L GVG GD +LE++Y AQ + G +G+ DL++LA R + R SLA L +E+LG L KP D+R NWE PL+ +QL YAA DA+AGLR +Q ++ P+VV +T D P A SA K + A K E G V +P LP AK +RL+ E+GL+ +++AE+R + STVL Y+A+ I AG YN + + A IA AL AA A+
Sbjct: 2 VAALLGRPDVLKVGVGAEGDAHKLERDYPWAGAPAACEKGGSEAQCHDPGRGRFRARGVLDLNDLACRVLGGKPGSRPKASLAALCEELLGCSLPKPADVRCSNWEAVPLTEEQLGYAATDAWAGLRCFQELRARSPEVVAEVATALRKDTIPMAHSARK----RPAPAEWCKSE-----QVGAVAVPSDLPPAKRCVYRLFFENGLAADSIAELRGIQTSTVLSYLADAITAGYAYNLADFEISAADWEAIAAALAAAPAT 254
BLAST of mRNA_H-paniculata_contig10693.444.1 vs. uniprot
Match: A0A6H5KKF2_9PHAE (HTH_40 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKF2_9PHAE) HSP 1 Score: 117 bits (293), Expect = 1.170e-24 Identity = 69/147 (46.94%), Postives = 86/147 (58.50%), Query Frame = 3
Query: 1104 MQTMPDVVVRQSTPNDDAPNAPSADKGSSRQNAGTLHMKGESERRDSAGRVDL---------------------PRLPLAKTETHRLWHEDGLSVEAVAEVRCNKVSTVLGYIAECIEAGLPYNWSRLNMDPATEVEIARALFAATA 1481
M MPD+V+++S N SA GS R+ GT + + G VD PRLPL+K ETHRLWHEDGLSV+AVAEVRCNK +TV GY+++CIEAGLPY+W+R+ +D E EI AL AATA
Sbjct: 1 MHEMPDLVLQRSDANGSRVEDTSAAAGSPRRCDGTAAAACSEGKGQARGGVDARPARGGQEMATASRNAETTTRPRLPLSKLETHRLWHEDGLSVDAVAEVRCNKANTVRGYLSDCIEAGLPYDWTRVGIDADEEEEIVTALLAATA 147
BLAST of mRNA_H-paniculata_contig10693.444.1 vs. uniprot
Match: A0A7S2H6Y7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H6Y7_9STRA) HSP 1 Score: 108 bits (269), Expect = 1.790e-22 Identity = 74/227 (32.60%), Postives = 110/227 (48.46%), Query Frame = 3
Query: 759 PDSLVRVLSDPGILLAGVGIGGDVSRLEKEYAQLRECGGVKGITDLSELAKRKVLPDRRRRGMWSLADLADEMLGVQLRKPQDLRTGNWEKRPLSVKQLEYAAGDAYAGLRLWQVMQTMPDVVVRQSTPNDDAPNAPSADKGSSRQNAGTLHMKGESERRDSAGRVDLPRLPLAKTETHRLWHEDGLSVEAVAEVRCNKVSTVLGYIAECIEAGLPYNWSRLNMDPA 1439
P L +LSDP + GVG D ++L + V G+ +LS+LA+RK++ + SL L +L +L KP +R NWE+RPLS QL YAA DAYAGLRL+Q ++ +PD VV +AG ++ + L +K + L+H G+S ++ R K++TVLGY+ E I AG Y++ R + A
Sbjct: 6 PRELACILSDPQLFKCGVGARNDATKLHNDLGV-----PVHGVVELSDLARRKLVDTQ-----MSLQGLCASVLKRRLEKPPHIRISNWEQRPLSGLQLSYAATDAYAGLRLYQKLEPLPDRVVTLEP------------------SAGMINSCNHGCGIPVPAAHTVKSLSPSKLAVYELFHHHGMSPAEISLTRNLKITTVLGYLGEAIAAGYAYDFKRFGIPDA 204
BLAST of mRNA_H-paniculata_contig10693.444.1 vs. uniprot
Match: A0A1Y1IE41_KLENI (Werner syndrome-like exonuclease n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IE41_KLENI) HSP 1 Score: 107 bits (266), Expect = 3.480e-20 Identity = 84/246 (34.15%), Postives = 121/246 (49.19%), Query Frame = 3
Query: 741 IAGFVLPDSLVRVLSDPGILLAGVGIGGDVSRLEKEYAQLRECGGVKGITDLSELAKRKVLPDRRRRGMWSLADLADEMLGVQLRKPQDLRTGNWEKRPLSVKQLEYAAGDAYAGLRLWQVMQTMPDVVVR---QSTPNDDAPNAPSADKGSSRQNAGTLHMKGESERRDSAGRVDLPR-LPLAKTETHRLWHEDGLSVEAVAEVRCNKVSTVLGYIAECIEAGLPYNWSRLNMDPATEVEIARAL 1466
IA L SL +L + + AG GI GD +L +++ + G+ DLS+LA ++ P R WSL LA E + Q+ KP R +WE+ PLS Q +YAA DAYA LRL+QV+ ++P R + P + + + G L E V P L +K + HRL H DGL++E +A + +V+TV Y+ E +AGL Y W RL + A I RA+
Sbjct: 370 IAHSGLTSSLRALLDEQSVGKAGAGIYGDAQKLRRDFGV-----SMGGLRDLSDLANERLQPKDGPR-KWSLTALAQEAMLQQVEKPPKQRISDWERLPLSPDQRQYAATDAYASLRLYQVLMSLPAPPPRPILRPLPQSELNSL--VNPGFXXXPXXELXPGAEPTSEAWIPAVPEPSYLAPSKMDVHRL-HLDGLTIEEIAVKKGVRVTTVESYLVEATQAGLAYAWHRLGVSDAVRERIERAV 606
BLAST of mRNA_H-paniculata_contig10693.444.1 vs. uniprot
Match: UPI0010A39886 (Werner Syndrome-like exonuclease n=1 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A39886) HSP 1 Score: 101 bits (252), Expect = 7.630e-20 Identity = 57/122 (46.72%), Postives = 79/122 (64.75%), Query Frame = 3
Query: 756 LPDSLVRVLSDPGILLAGVGIGGDVSRLEKEYAQLRECGGVKGITDLSELAKRKVLPDRRRRGMWSLADLADEMLGVQLRKPQDLRTGNWEKRPLSVKQLEYAAGDAYAGLRLWQVMQTMPD 1121
+P SL +L DP IL AGVGIGGD + K+Y +KG+ DLS LAK+K++ D + G+ SL + ++L QL+KP +R GNWE PLS +QL+YAA DAY L+QV++ +PD
Sbjct: 184 IPPSLKLLLEDPTILKAGVGIGGDARKFFKDYEI-----SIKGVEDLSFLAKQKLVGDIQSFGLTSLTE---KLLSKQLKKPSKIRLGNWEALPLSEQQLDYAAIDAYVSWYLYQVIKELPD 297
BLAST of mRNA_H-paniculata_contig10693.444.1 vs. uniprot
Match: A0A2Z6P1B5_TRISU (3'-5' exonuclease domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6P1B5_TRISU) HSP 1 Score: 95.1 bits (235), Expect = 5.050e-19 Identity = 51/123 (41.46%), Postives = 76/123 (61.79%), Query Frame = 3
Query: 756 LPDSLVRVLSDPGILLAGVGIGGDVSRLEKEYAQLRECGGVKGITDLSELAKRKVLPDRRRRGMWSLADLADEMLGVQLRKPQDLRTGNWEKRPLSVKQLEYAAGDAYAGLRLWQVMQTMPDV 1124
+P +L +L DP +L G GIGGD +++ ++Y +KG+ DLS A +K+ D + W LA L +++L QL+KP +R GNWE LS +QLEYAA DA+A L+Q ++ +PDV
Sbjct: 34 IPQNLQLLLEDPTVLKVGAGIGGDATKVSRDYDI-----SIKGVEDLSFHANQKLGGDPHK---WGLASLTEKLLSKQLKKPSKIRMGNWETPFLSKEQLEYAATDAFASWFLYQTIKDLPDV 148
BLAST of mRNA_H-paniculata_contig10693.444.1 vs. uniprot
Match: A0A7S0ZVH3_NOCSC (Hypothetical protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S0ZVH3_NOCSC) HSP 1 Score: 100 bits (249), Expect = 1.630e-18 Identity = 80/250 (32.00%), Postives = 128/250 (51.20%), Query Frame = 3
Query: 756 LPDSLVRVLSDPGILLAGVGIGGDVSRLEKEYAQLRECGGV-----KGITDLSELAKRKV---LPDRRRRGMWSLADLADEMLGVQLRKPQDLRTGNWEKRPLSVKQLEYAAGDAYAGLRLWQVMQTMP----DVVVRQSTPNDDAPNAPSADKGSSRQNAGTLHMKGESERRDSAGRVDLPRLPLAKTETHRLWHEDGLSVEAVAEVRCNKVSTVLGYIAECIEAGLPYNWS--RLNMDPATEVEIARA 1463
LP L +L++ ++ GVG GD +L +Y+ L+ G + + DL+E+A R + P R R SL L E+L L K +++R GNWE PLS Q++YAA DA+AG R ++V+ ++ D + S+ P+AP K + + T E+ + LP AK HRL+ E+GL+ +++AE+R + TV Y+A+ I AG Y+ + L+ D T + +A A
Sbjct: 217 LPGPLAALLANEDVIKVGVGAEGDAHKLAADYS-LKVIDGTSPFRARSVVDLNEVAWRALHGAQPGTRERK--SLRTLCFELLSQNLAKDEEVRCGNWEAVPLSQTQVDYAATDAWAGYRCFEVLHSLAPKSLDASLATSSFGKGEPSAPCVRKRKAPGDGCTSEPVAEAS--------TILDLPPAKRLCHRLFCENGLTADSIAELRGVQAGTVRSYLADAIAAGHAYDLADFELSADDRTAITVAFA 455
BLAST of mRNA_H-paniculata_contig10693.444.1 vs. uniprot
Match: A0A6D2IS89_9BRAS (3'-5' exonuclease domain-containing protein n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2IS89_9BRAS) HSP 1 Score: 94.7 bits (234), Expect = 1.100e-17 Identity = 51/124 (41.13%), Postives = 75/124 (60.48%), Query Frame = 3
Query: 756 LPDSLVRVLSDPGILLAGVGIGGDVSRLEKEYAQLRECGGVKGITDLSELAKRKVLPDRRRRGMWSLADLADEMLGVQLRKPQDLRTGNWEKRPLSVKQLEYAAGDAYAGLRLWQVMQTMPDVV 1127
+P SL ++ D ++ G+GI GD +L ++ +K I DLS+LA RK+ + +R W LA L + ++ +L KP +R GNWE RPLS QL+YAA DAYA L+QV++ +PD V
Sbjct: 170 IPQSLQHLIEDSTLVKVGIGIDGDSVKLFHDHGV-----SIKDIEDLSDLANRKIGGESKR---WGLASLTETLVCKELLKPNKIRLGNWEVRPLSKGQLQYAATDAYASWHLYQVLKDLPDAV 285
BLAST of mRNA_H-paniculata_contig10693.444.1 vs. uniprot
Match: A0A5J4XJR2_9CHLO (Werner Syndrome-like exonuclease-like (Fragment) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XJR2_9CHLO) HSP 1 Score: 93.6 bits (231), Expect = 1.960e-17 Identity = 77/263 (29.28%), Postives = 109/263 (41.44%), Query Frame = 3
Query: 321 TFVFNGNMVYIQTMDAADKAAREIEATRPKVLGFDIEWQVSFVQGEAPRRTATLQLCAPEQSPADRNSSVWGTAFIFHLTCICPLPGVAGDAQSSIATHAAADGIDPVASLDENSAPGQSRGTRDVTGDGNAAGSGVGLAIAGFVLPDSLVRVLSDPGILLAGVGIGGDVSRLEKEYAQLRECGGVKGITDLSELAKRKVLPDRRRR--GMWSLADLADEMLGVQLRKPQDLRTGNWEKRPLSVKQLEYAAGDAYAGLRLWQV 1103
T + G+ +Y T D ++ P ++GFDIEW+V++ GEAPR+TA LQLC+ Q H C L H A G+ P +L+++L I GVGI GD +L +++ +C G + LSE A ++ R WSLA L E+L + L K D+R NWE PLS +Q YAA DAYA ++L+QV
Sbjct: 81 TLDYKGHSIYAYTALEVDYHCTQLLKDPPSMVGFDIEWRVTYKAGEAPRKTALLQLCSRRQ----------------HGKYQCLL------------LHIAHSGLTP-----------------------------------------ALIQILECEEIKKIGVGICGDAHKLHRDFGV--QCVG---LVCLSEEANVRLCSSANGRMPQKWSLAGLMQELLHLTLDKGTDIRCSNWETCPLSSEQRAYAATDAYAAVKLYQV 269
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 229.6 |
| Seed ortholog evalue | 3.8e-57 |
| Seed eggNOG ortholog | 2880.D7FM66 |
| Preferred name | WRN |
| KEGG ko | ko:K10900,ko:K20777 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113 |
| EggNOG free text desc. | 3'-5' exonuclease activity |
| EggNOG OGs | KOG4373@1,KOG4373@2759 |
| EC | 3.1.11.1,3.6.4.12 |
| COG Functional cat. | C |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko03032,ko03400 |
| Exons | 6 |
| Model size | 2259 |
| Cds size | 1719 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10693.444.1 >prot_H-paniculata_contig10693.444.1 ID=prot_H-paniculata_contig10693.444.1|Name=mRNA_H-paniculata_contig10693.444.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=573bp
MGKNTGLFVPSYGQQGGEKENRMGAGADGAVGKPKGRRVLRMGPMVNKRS
LLPTFVFNGNMVYIQTMDAADKAAREIEATRPKVLGFDIEWQVSFVQGEA
PRRTATLQLCAPEQSPADRNSSVWGTAFIFHLTCICPLPGVAGDAQSSIA
THAAADGIDPVASLDENSAPGQSRGTRDVTGDGNAAGSGVGLAIAGFVLP
DSLVRVLSDPGILLAGVGIGGDVSRLEKEYAQLRECGGVKGITDLSELAK
RKVLPDRRRRGMWSLADLADEMLGVQLRKPQDLRTGNWEKRPLSVKQLEY
AAGDAYAGLRLWQVMQTMPDVVVRQSTPNDDAPNAPSADKGSSRQNAGTL
HMKGESERRDSAGRVDLPRLPLAKTETHRLWHEDGLSVEAVAEVRCNKVS
TVLGYIAECIEAGLPYNWSRLNMDPATEVEIARALFAATASTQTQELHAT
KTQQTAKPVTGTTQATLTATPPTQDATRVYDEVVVAIADDYKSPGVQKKE
SNLIGVGGEVANGHNIASVGGGYEGRWKFVSLKEAKELAPAEAEYWQIKM
VLGRIKSGWRGYDAVISGEHWH* back to topmRNA from alignment at H-paniculata_contig10693:165..6930- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig10693.444.1 ID=mRNA_H-paniculata_contig10693.444.1|Name=mRNA_H-paniculata_contig10693.444.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6766bp|location=Sequence derived from alignment at H-paniculata_contig10693:165..6930- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGGGGTGTAGGTTAGATTGTCTTTCGAGTACGACTTGGTCCTCGTAGAA
GGCGGAAGCTTTTCCAGCGGGTTTGCTGGAGTGACTAAACGTTGGCCGAG
GTAGTCTTGCTTTCTCGTTCAGTTGGGTATCCCTGTAGAATTGATTTGTT
GAGTTTAAATCATGGGTAAGAATACAGGGCTGTTTGTGCCGAGCTACGGT
CAGCAGGGAGGAGAAAAGGAGAACCGGATGGGTGCGGGTGCTGATGGCGC
AGTGGGCAAACCAAAGGGGAGACGGGTGCTTCGTATGGGACCTATGGTCA
ACAAGCGGTCTCTACTGCCAACATTTGTCTTCAACGGCAACATGGTCTAC
ATTCAGGTTTATCTTCACAGATTGTATAGTCTCAACAGAGAGAAGTGTTG
AACACACTTGGTGTGTAGGATAGGTAACGTTGTGTAACACCCCCCCCCCA
ATTCGAGATTGAGCGAAAGTAATTTTACTTTCCAAGACTTCTTGTTCGGT
GTTGGCATTACAAGCTAAATTCACATCAGTACCGCCTGAGGAGTAAACGT
CCCTTTCAAACCGCATCTTGTAGACGTTGAGAACTTGATTTTGATTTTTT
GGGATCAGGGCTTTTTGGCTCGCGAATTATATTGAAAACTTTTAAAGTCA
ACTTAGGCAATACTCCGAAGCCCCTATAACCGCTATGGCTTTTTTTGCAA
TCCCAGGATTCAAAGGCCTCTCTCTCTTTCTCACATAGGGGGCATTCTCC
CACCATGTAAAATTCGGTTCTCACCCATACTACCGTAGTCACGCTCGAAG
ATCGTAGCATTTGATCTAGGATTAGGATTTTAGTCTCATGTGTCGCGTTT
CCCCCTAATGCTGTCCCAAGTCGTACCCAGCAAACTTTTGAGCTAGGATA
ATCGATCCAGGGTTTGATTGTTGTCCTAGGTGGATGCTGGGCCTTGTCAG
GAGGTTCGAATGAAGGCACGGAACATGTCCAGCGGCTACATGACACATTC
ATACGGAACAGACCCTCATAATAGCCTATAATATTAGCAATTGGCACACA
GATAGTAGTGCTTGTGCAGCAGTCTGTCCCTGGAAGCGTGCGCACAATAA
TCACAAGGTCCTGCTGTAGTAGGTCTCGTGAGCGTGTCCGGCGGCAGTGT
GCTCACAGACCGCAGTAACGAATCATCGAGCAGGTTTCGTTCATCCAAGC
AAGACCGCGTTACATCCACCAGTTGATTGGAGGGCGTGACCGCGAGTGTG
GGATTTGAACCCCTATCTAAACAGTCCGTCCAACCAACTGTAAAGGCAAC
AAGCGTGAGAACAACGCAGTCAATCAAGAGTCAGCTGACAGGTGATAACT
GCCGTATCTATTCATTTGTCAGTTCAGGGAGGAGTGTTCCTGATCACAAG
AAGCCAATGGTACAGTGGCGTACAGTAGTGTTGCGTACGATTCAGCATGA
TCGCCCGCAGCCGTCTGTGTCGATGGAAGCGAACCCATGCAGTATCTTAG
GCAGGACGTAGGTGTCGATGGCTCTATACTTGCCTTCGCTGCTCTCATCT
GAACTACTTTTTCTTGACTGCGTTCTGGTTCCCCTTGCACACTTTTCCTG
CGTACTCGAACGGTGGAATGAAGGCTTCTAATGTTTTTCGATTTGATGCG
TGTGTCAAGATGCCGGCCGACTAGTATCGGATGCAATTTTCCTACCCAAG
CTTTCCCTTTATCGGTTACTTTCCAATCGAGCGCTCAAGTCTTGGTGCAC
AGAACGATGCCATCTCCTTTTTGCGCTTTTCTTCCCTTGCAGTATAGGAC
AGTTCTTGTAGTGTTGGCGAGCTCGCTGTGCCGTTTTGAGTTCAAGACGT
GTTCCGGATTCCTTTCGCGAGCATCTGCAGTCGTGAACACAATGTCAACT
CTATTGTTCCGTTATGTTCGACACCGTCGCGAAGCGTAATAATCTAATAA
TGGCAACGAATTTCACTTTACTATTCCGTTTTTTATTTATGTCGAGTACT
GTTTATTTTTTTTGTTTGCTATGTTATGTATCTGGTACGTTTGTCACCAC
ATGTGCATGGTACATGAGGGTAACATATAGTCGGCGCCGTGAAATCTGAG
GCATGTATTTGTATGTTTTATGTTTCCTCACGGCTGCAAAGGAAGGGGAA
GGAGTGGAACATGACCCAAGATGTACGAAAGCGAAACGGGAATAAATAGG
CACTTGAGTTGTCTCAACCATGCTACTGTAGCAGAGATTAGTATTTACAT
GGCTTGTAACAGTATTAACGTAGCCGTAACGCACAAAATTGATGGCTGAT
CCCAATGCCCGACGCATCTTTAAAGTTTGGTTTACATTCGCTTATTAAAC
AGCCTTCACGCCCTGTCGCCCTTGTTTTACCTCCTGACAGACCATGGACG
CTGCTGACAAGGCGGCCCGGGAGATAGAGGCGACTCGGCCCAAGGTGCTC
GGTTTCGACATCGAATGGCAGGTGTCCTTCGTGCAGGGAGAGGTGAGCAC
GCACGAGGCAGCACGTGCGGCACGACTACAGACAGTTAGAAGTAGCTCGG
TGGTACATGTCAGCCCAATGATGTTCGAGTATATGTTACGGATCGCAGTG
TTGACACGGACGTCGCTAGTACCTCTTGTTGACCACGGGCTAAATGTATC
ATTTATTCATCACGTACTTATTTTGCGAGCGTAAAATTCTGCCCTACTAT
TTCTTCGCCGTTTTCCGTTTCGTGACGGACAGTACATACTTGCGCTGCTT
ACGTATTCAGTTGGTAACCACAGTACCAGCATTTCCGATTTTCTTCGAGG
AGAATGTTGTCCTACATGGTAATTATGATGTGCGTGTGTTTTTTTTTCAA
ACCTACCGAGATCTTCTTGTCACAGTAGAAACTAAATAGCAGAAAGTAAA
AGGCGTAGCGACATGAAAAGAGAGGCCTTAACGACCAGTACTTATATTGG
CTGAGCTACTGTCTGTATTTGCTGCCGGCGGGGTTCCCCTGATAAGACCA
CGGTCGAAGGGAGGACGATGTCGCCTATTTGTTGCAGGGATACTGAACCC
GTACAGTAGATGTATAGTGTGGTAACACGACCGCAGACCTCTCACTTATG
AAGATATATCGACACGGGGAATCGCTGTTAACAGCGTACGCTTGGTGGGA
GTGAAGGTGAAGGTAAAATGTTTAGGGTTTCTCATTTATTGTAAGTTACG
TGTCCGGTGGGGTAAACGAAATGGAACACAAATGCACATCGACCACCTAC
ACGAATTAATCGACCATTAGCTGTACTATGCATTTTGCGGCGGGCACTTG
ATATTCCACGCGCTCAATTCTTGCCAGGCGCCGCGCCGGACAGCCACCCT
GCAGCTATGCGCGCCGGAGCAGTCCCCGGCAGACCGGAATTCATCTGTGT
GGGGCACCGCCTTCATCTTTCATCTTACATGCATATGCCCTCTTCCTGGC
GTCGCGGGAGACGCCCAATCGAGCATCGCCACGCATGCGGCGGCGGATGG
CATTGACCCAGTGGCATCACTTGACGAAAATTCGGCACCAGGGCAGAGCC
GGGGTACACGTGACGTGACGGGGGATGGCAACGCTGCTGGTTCTGGCGTG
GGCTTGGCCATTGCTGGCTTCGTGCTGCCCGACTCGCTCGTGCGGGTGCT
GTCTGATCCAGGCATCTTGCTGGCCGGGGTGGGCATCGGTGGTGACGTGT
CTCGATTGGAGAAGGAATACGCGCAACTCCGAGAGTGCGGGGGCGTGAAG
GGGATCACGGACCTGTCGGAGTTGGCCAAAAGGAAGGCAAGAGAGTGATC
GTTTTGCTTGCCTTTGGGCACCAAGAGAGCATGGGTGCCGTAGTCGTGTT
TACTCACCGTGTGGCCTGTCAAATCGCGATGATCTTGCCGGCAACCGCGT
CAGTGAAGAACCAAGCTTCCTCGGCAAAATGTTTGTAATGGAATGTCGAT
ATCCCTGAAAGTAGGCGAAAAACAAAGAAATGAAGGGTACCGGCGAGAGC
CGCAGGGCAATATGGCTACTATACACACGTTAGACCTATGTGCTACATTA
CACTGCACCATCCTCCCGAGGACGCGTGCTCAATGGTCTAATAACTACGG
AATGCAAAACATGAGTATGCCCTCGTCATTGCTTCCGAGGGCGATAGCTG
CTGTCCCTCTCCACGATATATCATATCTCGTGTCCCATGTCTCGCGTAGG
TGTTACCCGATCGGCGCAGGCGCGGCATGTGGTCGCTGGCAGACCTGGCC
GATGAGATGTTGGGTGTGCAACTCCGAAAGCCGCAGGACTTGAGGACAGG
AAACTGGGAGAAGCGACCGCTTAGCGTGAAGCAGCTAGAATACGCTGCTG
GAGATGCCTATGCGGGGCTGCGTCTATGGCAGGTAGGCAAGGCCTTGCTA
TGTACATTGTGTGCATGGCACCATCGGGAATTGGGTACTTGGCCTACTTT
TATGAGAATGAGTGAGGCGTTAGTGATTTTTGTAATGATGAAAGGCTGTT
TTTCATGGTGAAGTGCAGGCAAGGTACTGTCGTACTCTCTAGGAGTTTAG
GCGCTTACGCTCGAGAAAGCATCTTACTGTTGCAATTGGTTAAAATCTCG
TGATCGCCGCTCCTCATTGTTTGTGATACCGCGTGGGCTCACTGGTCGAG
GTGCGCTGGTGTGCTCGAGTTTTGATCCACTGGCCACACCTAGGTAGTTG
TTGACTCCTCTTGGACTGTTTTGAACACACACGGCAAGTTCACCAGCCGT
CTTGACACAATTAATAACAAGCCAATTACGCCACTATATCACTGTGACGG
GAAGCAGGTGATGCAGACTATGCCTGACGTGGTGGTCCGACAGTCGACAC
CGAATGATGATGCCCCCAATGCACCATCTGCAGACAAGGGCTCGTCCAGG
CAAAACGCGGGAACCTTGCATATGAAGGGAGAAAGTGAAAGGAGGGATAG
TGCAGGGCGGGTGGACTTGCCGCGGTTGCCATTGGCCAAAACCGAGACCC
ATCGGCTCTGGCACGAGGATGGCTTGTCCGTCGAAGCTGTGGCAGAGGTC
CGGTGCAACAAAGTTTCTACCGTCCTTGGGTATATCGCGGGTATGTGCAT
ATGTGCCCACACGCTGTTGATTTGTATTTCACAATAAAGGCGTTCTTTTT
CTCTACAATTTTAACGAGCACCCCAAATATTTTTGAGGATGATTCCCGAT
TTTTCGGCAAAACGCTTGCTTCTCAACTCCGAAATAGACGCCATCGAAAA
TAGCATTCAAGTAAAACCAAGTGGAGGAAAACAACAAACCCTTGCTAATA
TGTTGTGTTTGACGCCCCACATCATCGGGTTGATGTAACTTCACTGGATC
AAATGAAAAAACAAAGTGAAGGAGTGTTCTTGGATTATCCTGAGTTCCAA
TGTCGAAACGTCGGAAATCAAATTTTGCAAGGGCTTATGATTGATTGTTA
TTCGTTTCTTTTTCAGTGGCAAAGAATGACCTCTTGGAGGCCGAGTGCTT
TTATTCACGGCGGGTGTTTCGGTGTTCAAGGCCAACCGTGTCACCTCAGA
AACATGTCAGGATTTTAACGAAAAAAACGTAGATCATTAGCGCCTTCTAA
GGAACTAATCAACCGTACTTGTGGCACGAGGAAGTATGCACATGGCTGGC
AGCGGTCGAAAACCAGCATGGAAATTGCACTCCAGCTCCCAAATTCATGA
CACGAGGCCTTATTTTCGAGAGTTCACGGCATAATACGTACATTTGTGCA
TCCATGGCGGACAGTAACCGGAGCAGGCAGCTCAAGATACTGCAGCCCAG
CTCCCAAACGCATGACACGCATACTACACTTGACCCTCTGATTCTCTGCC
CACACTCCTAACCCTGCTAATGAATCTGCATCCCGTACAGAATGCATTGA
GGCGGGTTTGCCGTACAACTGGAGTCGGCTCAACATGGATCCAGCTACGG
AGGTCGAGATTGCACGGGCCCTGTTTGCCGCAACAGCGTCAACGCAAACA
CAAGAATTACATGCAACGAAAACACAGCAGACGGCAAAACCCGTGACGGG
CACGACCCAAGCAACATTGACAGCTACCCCACCCACTCAAGACGCAACAC
GGGTTTATGATGAGGTTGTTGTCGCGATCGCCGACGACTACAAAAGTCCT
GGCGTACAAAAAAAGGAATCTAACCTGATTGGAGTGGGGGGCGAGGTAGC
GAATGGTCACAATATTGCGTCTGTCGGTGGTGGATATGAAGGGCGTTGGA
AGTTCGTCAGCCTCAAAGAGGCGAAGGAACTCGCTCCTGCAGAAGCAGAG
TACTGGCAGATTAAGATGGTCTTGGGGAGGATCAAGTCCGGATGGCGAGG
GTATGATGCGGTAATTAGTGGAGAGCATTGGCACTAGAGATAGTGCTTCG
TTGTTGTCGGTGTGTTACCTGTTGATAGCGATAGACGATAGATAGCTTTC
GGCATCAAGAGTCACATGTGACAACCGTCGGTCATCGACAAATAGATGTT
GCCCAATGCTACTGCGGTAGTTGCGCACACTGTTTTCAATAAAACGGTAA
AAGACCCCAATCTCGCTGTACGTGGACTGTATTACCATTTTCGGTGGTTT
TGGGGTAACCCTGAGGTGTTGAAGGTTTATTACTTGATGAAATCTTTGTC
ATATGTTGTCATCGCCACTGTGAGGCTAGAGCTACTCACACTCTATGAAT
GGTGTGAGTCCGAGTTATCCATGTGTTTTTGTCGTCTACAACGTCTGTGT
TTTGCTCCATATCGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig10693:165..6930- >mRNA_H-paniculata_contig10693.444.1 ID=mRNA_H-paniculata_contig10693.444.1|Name=mRNA_H-paniculata_contig10693.444.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3438bp|location=Sequence derived from alignment at H-paniculata_contig10693:165..6930- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGTAAGAATACAGGGCTGTTTGTGCCGAGCTACGGTCAGCAGGGAGG
AGAAAAGGAGAACCGGATGGGTGCGGGTGCTGATGGCGCAGTGGGCAAAC
CAAAGGGGAGACGGGTGCTTCGTATGGGACCTATGGTCAACAAGCGGTCT
CTACTGCCAACATTTGTCTTCAACGGCAACATGGTCTACATTCAGATGGG
TAAGAATACAGGGCTGTTTGTGCCGAGCTACGGTCAGCAGGGAGGAGAAA
AGGAGAACCGGATGGGTGCGGGTGCTGATGGCGCAGTGGGCAAACCAAAG
GGGAGACGGGTGCTTCGTATGGGACCTATGGTCAACAAGCGGTCTCTACT
GCCAACATTTGTCTTCAACGGCAACATGGTCTACATTCAGACCATGGACG
CTGCTGACAAGGCGGCCCGGGAGATAGAGGCGACTCGGCCCAAGGTGCTC
GGTTTCGACATCGAATGGCAGGTGTCCTTCGTGCAGGGAGAGACCATGGA
CGCTGCTGACAAGGCGGCCCGGGAGATAGAGGCGACTCGGCCCAAGGTGC
TCGGTTTCGACATCGAATGGCAGGTGTCCTTCGTGCAGGGAGAGGCGCCG
CGCCGGACAGCCACCCTGCAGCTATGCGCGCCGGAGCAGTCCCCGGCAGA
CCGGAATTCATCTGTGTGGGGCACCGCCTTCATCTTTCATCTTACATGCA
TATGCCCTCTTCCTGGCGTCGCGGGAGACGCCCAATCGAGCATCGCCACG
CATGCGGCGGCGGATGGCATTGACCCAGTGGCATCACTTGACGAAAATTC
GGCACCAGGGCAGAGCCGGGGTACACGTGACGTGACGGGGGATGGCAACG
CTGCTGGTTCTGGCGTGGGCTTGGCCATTGCTGGCTTCGTGCTGCCCGAC
TCGCTCGTGCGGGTGCTGTCTGATCCAGGCATCTTGCTGGCCGGGGTGGG
CATCGGTGGTGACGTGTCTCGATTGGAGAAGGAATACGCGCAACTCCGAG
AGTGCGGGGGCGTGAAGGGGATCACGGACCTGTCGGAGTTGGCCAAAAGG
AAGGCGCCGCGCCGGACAGCCACCCTGCAGCTATGCGCGCCGGAGCAGTC
CCCGGCAGACCGGAATTCATCTGTGTGGGGCACCGCCTTCATCTTTCATC
TTACATGCATATGCCCTCTTCCTGGCGTCGCGGGAGACGCCCAATCGAGC
ATCGCCACGCATGCGGCGGCGGATGGCATTGACCCAGTGGCATCACTTGA
CGAAAATTCGGCACCAGGGCAGAGCCGGGGTACACGTGACGTGACGGGGG
ATGGCAACGCTGCTGGTTCTGGCGTGGGCTTGGCCATTGCTGGCTTCGTG
CTGCCCGACTCGCTCGTGCGGGTGCTGTCTGATCCAGGCATCTTGCTGGC
CGGGGTGGGCATCGGTGGTGACGTGTCTCGATTGGAGAAGGAATACGCGC
AACTCCGAGAGTGCGGGGGCGTGAAGGGGATCACGGACCTGTCGGAGTTG
GCCAAAAGGAAGGTGTTACCCGATCGGCGCAGGCGCGGCATGTGGTCGCT
GGCAGACCTGGCCGATGAGATGTTGGGTGTGCAACTCCGAAAGCCGCAGG
ACTTGAGGACAGGAAACTGGGAGAAGCGACCGCTTAGCGTGAAGCAGCTA
GAATACGCTGCTGGAGATGCCTATGCGGGGCTGCGTCTATGGCAGGTGTT
ACCCGATCGGCGCAGGCGCGGCATGTGGTCGCTGGCAGACCTGGCCGATG
AGATGTTGGGTGTGCAACTCCGAAAGCCGCAGGACTTGAGGACAGGAAAC
TGGGAGAAGCGACCGCTTAGCGTGAAGCAGCTAGAATACGCTGCTGGAGA
TGCCTATGCGGGGCTGCGTCTATGGCAGGTGATGCAGACTATGCCTGACG
TGGTGGTCCGACAGTCGACACCGAATGATGATGCCCCCAATGCACCATCT
GCAGACAAGGGCTCGTCCAGGCAAAACGCGGGAACCTTGCATATGAAGGG
AGAAAGTGAAAGGAGGGATAGTGCAGGGCGGGTGGACTTGCCGCGGTTGC
CATTGGCCAAAACCGAGACCCATCGGCTCTGGCACGAGGATGGCTTGTCC
GTCGAAGCTGTGGCAGAGGTCCGGTGCAACAAAGTTTCTACCGTCCTTGG
GTATATCGCGGGTGATGCAGACTATGCCTGACGTGGTGGTCCGACAGTCG
ACACCGAATGATGATGCCCCCAATGCACCATCTGCAGACAAGGGCTCGTC
CAGGCAAAACGCGGGAACCTTGCATATGAAGGGAGAAAGTGAAAGGAGGG
ATAGTGCAGGGCGGGTGGACTTGCCGCGGTTGCCATTGGCCAAAACCGAG
ACCCATCGGCTCTGGCACGAGGATGGCTTGTCCGTCGAAGCTGTGGCAGA
GGTCCGGTGCAACAAAGTTTCTACCGTCCTTGGGTATATCGCGGAATGCA
TTGAGGCGGGTTTGCCGTACAACTGGAGTCGGCTCAACATGGATCCAGCT
ACGGAGGTCGAGATTGCACGGGCCCTGTTTGCCGCAACAGCGTCAACGCA
AACACAAGAATTACATGCAACGAAAACACAGCAGACGGCAAAACCCGTGA
CGGGCACGACCCAAGCAACATTGACAGCTACCCCACCCACTCAAGACGCA
ACACGGGTTTATGATGAGGTTGTTGTCGCGATCGCCGACGACTACAAAAG
TCCTGGCGTACAAAAAAAGGAATCTAACCTGATTGGAGTGGGGGGCGAGG
TAGCGAATGGTCACAATATTGCGTCTGTCGGTGGTGGATATGAAGGGCGT
TGGAAGTTCGTCAGCCTCAAAGAGGCGAAGGAACTCGCTCCTGCAGAAGC
AGAGTACTGGCAGATTAAGATGGTCTTGGGGAGGATCAAGTCCGGATGGC
GAGGGTATGATGCGGTAATTAGTGGAGAGCATTGGCACTAGAATGCATTG
AGGCGGGTTTGCCGTACAACTGGAGTCGGCTCAACATGGATCCAGCTACG
GAGGTCGAGATTGCACGGGCCCTGTTTGCCGCAACAGCGTCAACGCAAAC
ACAAGAATTACATGCAACGAAAACACAGCAGACGGCAAAACCCGTGACGG
GCACGACCCAAGCAACATTGACAGCTACCCCACCCACTCAAGACGCAACA
CGGGTTTATGATGAGGTTGTTGTCGCGATCGCCGACGACTACAAAAGTCC
TGGCGTACAAAAAAAGGAATCTAACCTGATTGGAGTGGGGGGCGAGGTAG
CGAATGGTCACAATATTGCGTCTGTCGGTGGTGGATATGAAGGGCGTTGG
AAGTTCGTCAGCCTCAAAGAGGCGAAGGAACTCGCTCCTGCAGAAGCAGA
GTACTGGCAGATTAAGATGGTCTTGGGGAGGATCAAGTCCGGATGGCGAG
GGTATGATGCGGTAATTAGTGGAGAGCATTGGCACTAG back to top
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