mRNA_H-paniculata_contig10691.443.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10691.443.1 vs. uniprot
Match: D7FRT5_ECTSI (TNase-like domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT5_ECTSI) HSP 1 Score: 166 bits (420), Expect = 1.620e-44 Identity = 80/113 (70.80%), Postives = 92/113 (81.42%), Query Frame = 1 Query: 10 RLRGLGLFAAGIMVGCCISPGLSSNVRLYRTVPDIPTRLFSEHATLRATVISVSDGDSIRVRHKPTIPLPLPGRKMEGKK-SEETLQIRLYAVDCPEVAHFGNPAQPLSAEAK 345 R + +F AG++ GCCIS +S+N+RLYRTVPDIP +F HA+L V++VSDGDSIRVRHKP IPLPLP R M GKK SE+TLQIRLYAVDCPEVAHFGNPAQP SAEAK Sbjct: 59 RRASIAIFTAGMLFGCCISSPVSANIRLYRTVPDIPKSMFKNHASLNGNVVTVSDGDSIRVRHKPNIPLPLPNRDMTGKKNSEQTLQIRLYAVDCPEVAHFGNPAQPFSAEAK 171
BLAST of mRNA_H-paniculata_contig10691.443.1 vs. uniprot
Match: A0A6H5JVK5_9PHAE (TNase-like domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVK5_9PHAE) HSP 1 Score: 159 bits (403), Expect = 7.530e-43 Identity = 76/102 (74.51%), Postives = 86/102 (84.31%), Query Frame = 1 Query: 43 IMVGCCISPGLSSNVRLYRTVPDIPTRLFSEHATLRATVISVSDGDSIRVRHKPTIPLPLPGRKMEGKK-SEETLQIRLYAVDCPEVAHFGNPAQPLSAEAK 345 ++ GCCIS +S+N+RLYRTVPDIP +F HATL V++VSDGDSIRVRHKP IPLPLP R M GKK SE+TLQ+RLYAVDCPEVAHFGNPAQP SAEAK Sbjct: 1 MLFGCCISSPVSANIRLYRTVPDIPKSMFKNHATLNGNVVTVSDGDSIRVRHKPNIPLPLPNRDMTGKKNSEQTLQVRLYAVDCPEVAHFGNPAQPFSAEAK 102
BLAST of mRNA_H-paniculata_contig10691.443.1 vs. uniprot
Match: A0A1V9ZQY1_9STRA (TNase-like domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQY1_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 7.850e-17 Identity = 50/109 (45.87%), Postives = 67/109 (61.47%), Query Frame = 1 Query: 22 LGLFAAGIMVGCCISPGLSSNVRLYRTVPDIPTRLFSEHATLRATVISVSDGDSIRVRHKPTIPLPLPGRKMEGKKSEETLQIRLYAVDCPEVAHFGNPAQPLSAEAKE 348 +G F G+++G I P + + + + TV +IP +F E +RA ISVSDGD++RVRH P + P M+GK SE T+QIRL A+D PE FGN QP EAKE Sbjct: 40 IGAFTFGLVLGLAI-PKVRAPFQRFSTVEEIPNFMFQEQRKIRAKAISVSDGDTLRVRHLPFLRGP---GNMDGKLSETTMQIRLCAIDTPETPKFGNQGQPFGDEAKE 144
BLAST of mRNA_H-paniculata_contig10691.443.1 vs. uniprot
Match: A0A836C7S0_9STRA (TNase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7S0_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 1.300e-16 Identity = 53/117 (45.30%), Postives = 69/117 (58.97%), Query Frame = 1 Query: 7 ARLRGLGLFAAGIMV---GCCISPGLSSNVRLYRTVPDIPTRLFSEHATLRATVISVSDGDSIRVRHKPTIPLPLPGRKMEGKKSEETLQIRLYAVDCPEVAHFGNPAQPLSAEAKE 348 AR +G AAG M+ G PG+++ Y T DIP R S HAT+ TV SV+DGD+IRVRH+P + G +GK SE + +RLY VD PE A FG P QP++ EA + Sbjct: 44 ARYAVVGAVAAGAMLVGTGALSIPGMTT----YLTANDIPARYISAHATISGTVASVTDGDTIRVRHEPALSFLRRG-SAKGKLSETAIAVRLYGVDTPETAKFGKPGQPMAKEATD 155
BLAST of mRNA_H-paniculata_contig10691.443.1 vs. uniprot
Match: R1DC52_EMIHU (TNase-like domain-containing protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DC52_EMIHU) HSP 1 Score: 89.7 bits (221), Expect = 2.470e-16 Identity = 48/103 (46.60%), Postives = 64/103 (62.14%), Query Frame = 1 Query: 37 AGIMVGCCISPGLSSNVRLYRTVPDIPTRLFSEHATLRATVISVSDGDSIRVRHKPTIPLPLPGRKMEGKKSEETLQIRLYAVDCPEVAHFGNPAQPLSAEAK 345 AG+ GC S L + LY T D+P +H ++ A V++VSDGD++RVRH PT+ L K +GK SE T+ +R+ AVD PE A FG P QPL A+AK Sbjct: 93 AGVAAGCAGST-LQRCLDLYLTADDMPGSHLRQHRSIAAKVVAVSDGDTLRVRHTPTL---LSSGKFKGKLSENTISVRIAAVDTPETAKFGQPGQPLGADAK 191
BLAST of mRNA_H-paniculata_contig10691.443.1 vs. uniprot
Match: HTP3_SAPPC (Endonuclease Htp3 n=2 Tax=Saprolegnia TaxID=4769 RepID=HTP3_SAPPC) HSP 1 Score: 84.7 bits (208), Expect = 3.010e-15 Identity = 49/105 (46.67%), Postives = 60/105 (57.14%), Query Frame = 1 Query: 31 FAAGIMVGCCISPGLSSNVRLYRTVPDIPTRLFSEHATLRATVISVSDGDSIRVRHKPTIPLPLPGRKMEGKKSEETLQIRLYAVDCPEVAHFGNPAQPLSAEAK 345 FA G+ +G I P L + + TV DIP F TLR V+SV+DGD+IRVRH P L +GK +E TLQ+R+ VDCPE A FG QP EAK Sbjct: 13 FAVGLGLGLLI-PHLQKPFQRFSTVNDIPKEFFEHERTLRGKVVSVTDGDTIRVRHVPW--LANGDGDFKGKLTETTLQLRVAGVDCPETAKFGRTGQPFGEEAK 114
BLAST of mRNA_H-paniculata_contig10691.443.1 vs. uniprot
Match: A0A067CVU8_SAPPC (TNase-like domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CVU8_SAPPC) HSP 1 Score: 84.0 bits (206), Expect = 1.180e-14 Identity = 49/107 (45.79%), Postives = 64/107 (59.81%), Query Frame = 1 Query: 25 GLFAAGIMVGCCISPGLSSNVRLYRTVPDIPTRLFSEHATLRATVISVSDGDSIRVRHKPTIPLPLPGRKMEGKKSEETLQIRLYAVDCPEVAHFGNPAQPLSAEAK 345 G F G+ +G + P L + + TV DIP +F E ++A I+ SDGD++RVRH +PL M+GK SE+TLQIRL A+D PE A FGN QP EAK Sbjct: 46 GAFLIGLGLGLVL-PRLRAPFTRFATVEDIPNFMFQEQRKIKAKAINFSDGDTLRVRH---LPLFRGLGPMDGKLSEQTLQIRLCAIDTPETAKFGNQGQPFGDEAK 148
BLAST of mRNA_H-paniculata_contig10691.443.1 vs. uniprot
Match: K0RZ41_THAOC (TNase-like domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RZ41_THAOC) HSP 1 Score: 84.0 bits (206), Expect = 1.850e-13 Identity = 46/97 (47.42%), Postives = 58/97 (59.79%), Query Frame = 1 Query: 67 PGLSSNV--RLYRTVPDIPTRLFSEHATLRATVISVSDGDSIRVRHKPTIPLPLPGRKMEGKKSEE-TLQIRLYAVDCPEVAHFGNPAQPLSAEAKE 348 P L++ V R + T DIP LF E +++R V+ V DGD+IRVRH P PL +K E T+ +RLY VD PE A FGNP QP S EAK+ Sbjct: 576 PSLTATVFPRQFDTADDIPADLFRERSSIRGRVVRVIDGDTIRVRHTPLYPLSSGADGCRDRKLTECTISVRLYGVDAPETAKFGNPGQPYSQEAKD 672
BLAST of mRNA_H-paniculata_contig10691.443.1 vs. uniprot
Match: W4G582_9STRA (TNase-like domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G582_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 2.920e-13 Identity = 48/109 (44.04%), Postives = 61/109 (55.96%), Query Frame = 1 Query: 28 LFAAGIMVGCCISPGLSSNVRLYRTVPDIPTRLFSEHATLRATVISVSDGDSIRVRHKPTIPLPL---PGRKMEGKKSEETLQIRLYAVDCPEVAHFGNPAQPLSAEAK 345 +F G+ G I P + + + TV DIP F + TLR TV+SVSDGD+ R+RH +PL G K +E TLQIRL VD PE+ HFG QP + EAK Sbjct: 20 VFVIGLCSGLLI-PRVMRTFQRFSTVKDIPDACFHQRMTLRGTVVSVSDGDTFRLRH-----MPLWRGVGTYPTKKPTEHTLQIRLAGVDTPEMPHFGKECQPYAKEAK 122
BLAST of mRNA_H-paniculata_contig10691.443.1 vs. uniprot
Match: A0A1V9YH46_9STRA (TNase-like domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YH46_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 3.220e-13 Identity = 53/122 (43.44%), Postives = 65/122 (53.28%), Query Frame = 1 Query: 25 GLFAAGIMVGCCISPGLSSNVRLYRTVPDIPTRLFSEHATLRATVISVSDGDSIRVRHKPTIPLPLPGRKMEGKKSEETLQIRLYAV--------------DCPEVAHFGNPAQPLSAEAKE 348 G F G+ G + P L + + + TV DIP +F E LRA IS SDGD++RVRH +PL M+GK SE+TLQIRL A+ D PE A FGN QP EAKE Sbjct: 48 GAFVVGLGFGLVL-PRLRAPFQRFSTVDDIPNFMFQEQRKLRAKAISFSDGDTLRVRH---LPLFRGLGPMDGKLSEQTLQIRLCAIGKIRRKSRLNIALPDTPETAKFGNKGQPFGDEAKE 165 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10691.443.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10691.443.1 >prot_H-paniculata_contig10691.443.1 ID=prot_H-paniculata_contig10691.443.1|Name=mRNA_H-paniculata_contig10691.443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp MVGCCISPGLSSNVRLYRTVPDIPTRLFSEHATLRATVISVSDGDSIRVRback to top mRNA from alignment at H-paniculata_contig10691:4759..8436- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10691.443.1 ID=mRNA_H-paniculata_contig10691.443.1|Name=mRNA_H-paniculata_contig10691.443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3678bp|location=Sequence derived from alignment at H-paniculata_contig10691:4759..8436- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10691:4759..8436- >mRNA_H-paniculata_contig10691.443.1 ID=mRNA_H-paniculata_contig10691.443.1|Name=mRNA_H-paniculata_contig10691.443.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=942bp|location=Sequence derived from alignment at H-paniculata_contig10691:4759..8436- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |