mRNA_H-paniculata_contig10685.439.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10685.439.1 vs. uniprot
Match: A0A6H5KCP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP4_9PHAE) HSP 1 Score: 399 bits (1024), Expect = 2.460e-125 Identity = 227/404 (56.19%), Postives = 273/404 (67.57%), Query Frame = 1 Query: 412 RATGGTSMPKAAAR--SKEEMDAEWERILEEDNXXXXXXXXXXXXXXXXXXKRSDEELLLGFDVKGGEFDDVEGGMDSILGKGDSSGGEGQRLEARM---PYKQRMKLQKERQEAWAEKRKTFSPAHNAHIDMVAQNRAIAAARREKYTKKFFRKKKIYDIIKEKDRKEEREAVWATRWPRKVTRSAADLKVGEWVEGKVRNVESYGAWVDIGLERDCLLHVREMSRTFTPRARDAVSTKDVVRVRVTFVNADECKVGLSLIEEGPREGDLPPAPPRPSISILDVSPGQQLWGHVERATNFGAYVDVGTEVPGFLHLKEIPGRPKGVDAPEVLPRNRRLRVYAKEIDLEAKRIKLTCKRPKSKPRCGPKSA-LASDAYLEEFDYDDSRLPGARQDEIEWDDDEE 1605 R+T ++ AR + EEMDAEWE IL D+ SDEELL GG D G + + R+ YK RMK +K ++ AW EKRKTFS AHN ++D +NR IAAARREKYTKKF+R KKIYDI+KE+ RK REA WATRWPR+VTR DL+ GEW+ GKVRNVESYGAWVD+ ERD LLHV++M TFTP A + V+TKD+++VRV FV+ K+GLSL+E+GPREGDLP PPRP IS+ DVS G +LWG+VER TN GAYV+VG EVPGFL LKEIPGRPKG+ AP+VL RN+RLRVYA+E+D E RIKLTCKRP+S PRCGP +A LASDA EEFDYDD+ +D+ WD D E Sbjct: 127 RSTAAAAVAPLGARPPTTEEMDAEWEGILSGDDEQEDVDEGDEDDDATAML--SDEELLATDASVGGLLGDE--GEEXXXXXXXXXXXXXXXRKPRVWYDSYKARMKAEKAKEAAWQEKRKTFSKAHNDYLDEAQRNREIAAARREKYTKKFYRDKKIYDIVKERGRKAVREATWATRWPRQVTRKLEDLQEGEWITGKVRNVESYGAWVDVNAERDGLLHVKDMGETFTPSAGEVVATKDIIQVRVKFVDPVTGKLGLSLVEDGPREGDLPLPPPRPPISVADVSRGAELWGYVERVTNMGAYVNVGAEVPGFLLLKEIPGRPKGLSAPQVLRRNKRLRVYAREVDREGLRIKLTCKRPRSLPRCGPAAAALASDADAEEFDYDDTARVRYSEDDG-WDRDNE 525
BLAST of mRNA_H-paniculata_contig10685.439.1 vs. uniprot
Match: D8LK22_ECTSI (30S ribosomal protein S1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK22_ECTSI) HSP 1 Score: 394 bits (1011), Expect = 2.600e-125 Identity = 199/303 (65.68%), Postives = 240/303 (79.21%), Query Frame = 1 Query: 700 YKQRMKLQKERQEAWAEKRKTFSPAHNAHIDMVAQNRAIAAARREKYTKKFFRKKKIYDIIKEKDRKEEREAVWATRWPRKVTRSAADLKVGEWVEGKVRNVESYGAWVDIGLERDCLLHVREMSRTFTPRARDAVSTKDVVRVRVTFVNADECKVGLSLIEEGPREGDLPPAPPRPSISILDVSPGQQLWGHVERATNFGAYVDVGTEVPGFLHLKEIPGRPKGVDAPEVLPRNRRLRVYAKEIDLEAKRIKLTCKRPKSKPRCGPKSA-LASDAYLEEFDYDDSRLPGARQDEIEWDDDEE 1605 YK RMK +K ++ AW EKRKTFS AHN ++D +NR IAAARREKYTKKF+R KKIYDI+KE+ RK REA WATRWPR+VTR DL+ GEW++GKVRNVESYGAWVD+ ERD LLHV++M TFTP A + V+TKD+++ RV FV+ K+GLSL+E+GPREGDLP PPRP IS+ DVS G +LWG+VER TN GAYV+VG EVPGFL LKEIPGRP+G+ AP+VL RN+RLRVYA+E+D E RIKLTCKRP+S PRCGP +A LASDA EEFDYDD+ +D+ WD D+E Sbjct: 79 YKARMKAEKAKEAAWQEKRKTFSKAHNDYLDEAQRNREIAAARREKYTKKFYRDKKIYDIVKERGRKAVREATWATRWPRQVTRKLEDLQEGEWIKGKVRNVESYGAWVDVNAERDGLLHVKDMGETFTPSAGEVVATKDIIQARVKFVDPVTGKLGLSLVEDGPREGDLPLPPPRPPISVADVSRGAELWGYVERVTNMGAYVNVGAEVPGFLLLKEIPGRPRGLGAPQVLRRNKRLRVYAREVDREGLRIKLTCKRPRSLPRCGPAAAALASDADAEEFDYDDTARVRYSEDDG-WDRDDE 380
BLAST of mRNA_H-paniculata_contig10685.439.1 vs. uniprot
Match: A0A835YZW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZW7_9STRA) HSP 1 Score: 198 bits (503), Expect = 1.750e-53 Identity = 109/249 (43.78%), Postives = 150/249 (60.24%), Query Frame = 1 Query: 766 SPAHNAHIDMVAQNRAIAAARREKYTKKFFRKKKIYDIIKEKDRKEEREAVWATRWPRKVTRSAADLKVGEWVEGKVRNVESYGAWVDIGLERDCLLHVREMSRTFTPRARDAVSTKDVVRVRVTFVNADECKVGLSLI-----EEGPREGDLPPAPPRPSISILDVSPGQQLWGHVERATNFGAYVDVGTEVPGFLHLKEIPGRPKGVDAPEVLPRNRRLRVYAKEIDLEAKRIKLTCKRPKSKPRCG 1497 S H ++ V +N+ AAARR +KKF+RKK +YD I++K R++ +EA ATRW R VT A L+ G W+ GKVRN+ES+GAWVD+G ERD LLHV +MS FTPR DA +T D++ V V V+A ++ LS + EE + P + ++ G ++WG + + TNFG +V+ G EV GFLH+ + P G EV R +R+R Y KE+D EA R+KLT RP PR G Sbjct: 49 SEQHKQYLAEVEENKKRAAARRLANSKKFWRKKVVYDFIRDKTREQSKEAAAATRWERNVTHPLASLERGVWLTGKVRNLESFGAWVDVGAERDGLLHVSDMSEGFTPRVADAFNTGDIISVTVKHVDAGTNRLALSAVAVSLEEEAEESYEALKTP------LGEMEEGDEVWGEITKVTNFGVFVEAGVEVAGFLHVSDWPAA-AGRRPSEVFSRRQRVRTYVKEVDTEASRLKLTGVRPSYLPRIG 290
BLAST of mRNA_H-paniculata_contig10685.439.1 vs. uniprot
Match: A0A7S2V5P7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P7_9STRA) HSP 1 Score: 131 bits (330), Expect = 7.130e-30 Identity = 72/191 (37.70%), Postives = 118/191 (61.78%), Query Frame = 1 Query: 937 RKVTRSAADLKVGEWVEGKVRNVESYGAWVDIGLERDCLLHVREM-SRTFTPRARDAVSTKDVVRVRVTFVNADECKVGLSLIEEGPREGDLPPAPPRPSISILD------VSPGQQLWGHVERATNFGAYVDVGTEVPGFLHLKEIPGRPKGVDAPEVLPRNRRLRVYAKEIDLEAKRIKLTCKRPKSKP 1488 R V++ ++L+ G+ + G VRNVE +GA+V +G E+D LLH+++M S + RA + + D V V+V FV+A++ +GL++ E + + P +++ LD + Q+WG VER T+FGA+VD+G EV FLH+ + P R K A + R +RLR+Y KE++L+ R+K+T +RP+ P Sbjct: 134 RVVSKPLSELQAGDRLNGTVRNVEKFGAFVHVGAEKDGLLHIKDMCSAQWVSRADEVFKSGDEVSVQVKFVDAEKRLLGLTMKELDDQGMPMIPEEVASALANLDRQSLKNLEEDDQVWGVVERVTSFGAFVDIGAEVQAFLHILDYPRRVKAASATKSFHRGQRLRLYVKEVELDKNRVKVTAERPEWLP 324
BLAST of mRNA_H-paniculata_contig10685.439.1 vs. uniprot
Match: A0A7S2EYN2_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EYN2_TRICV) HSP 1 Score: 120 bits (300), Expect = 1.090e-25 Identity = 75/187 (40.11%), Postives = 111/187 (59.36%), Query Frame = 1 Query: 958 ADLKVGEWVEGKVRNVESYGAWVDIGLERDCLLHVREMSRT-FTPRARDAVSTKDVVRVRVTFVNADECKVGLSLIE-EGPRE-GDLPPAPPRPSISILDVSPGQQLWGHVERATNFGAYVDVGTEVPGFLHLKEIP--GRPKGVDAPEVLPRNRRLRVYAKEIDLEAKRIKLTCKRPKSKPRCGPK 1503 +DL VG+ VEG V ++ +YGA+VD+G ERD LLHV +++R F R +S DVV VRV V+ + K+ LS++ P + D+ A P I + D+ +LWG +ER T++GAYV++G EV GFLH + P G G + R+RV+A ++D E R++LT RP+ P GP+ Sbjct: 171 SDLTVGQEVEGTVISLVNYGAYVDVGSERDGLLHVGQITRDLFVEHPRQVLSPGDVVTVRVARVSPELKKLQLSMLPLPAPLDPDDVSDADP---IPLSDIDVNDELWGQIERVTDYGAYVELGAEVEGFLHFMDHPEFGLTPGATPDTYMRPGDRVRVWAADVDEEKGRVRLTANRPEGLP--GPR 352
BLAST of mRNA_H-paniculata_contig10685.439.1 vs. uniprot
Match: A0A7S2Q562_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q562_9STRA) HSP 1 Score: 110 bits (276), Expect = 1.340e-22 Identity = 81/259 (31.27%), Postives = 131/259 (50.58%), Query Frame = 1 Query: 760 TFSPAHNAHIDMVAQNRAIAAARREKYTKKFFRKKKIYDIIKEKDRKEEREAVWATRWPR--KVTRSAADLKVGEWVEGKVRNVESYGAWVDIGLERDCLLHVREMSRT-FTPRARDAVSTKDVVRVRVTFVNADECKVGLSLI------EEGPREGDLPPAPPRPSISILDVSPGQQLWGHVERATNFGAYVDVGTEVPGFLHLKEIP--GRPKGVDAPEVLPRNRRLRVYAKEIDLEAKRIKLTCKRPKSKPRCGPK 1503 + +P A I AQ RAI +R + ++ +K+++Y +E +K + + P K ADL GE V G+V ++ S+GA+VDIG E D LLHV ++SR F R ++ D V VR+ ++ K+ L+++ EE + I + ++ +LWG + R T++GAY+++G V GF+H + P G KG E + R+RV+ ++D +RIKLT RP P GP+ Sbjct: 90 SLNPKIKARIVKEAQERAIRNKKRREPAEE--KKRRLYSQYREMQKKSKFDKYVTREKPTHDKTRTKLADLNPGETVPGRVISLTSFGAYVDIGSEVDGLLHVSQISRDEFVDHPRKFLAPGDDVEVRIVRMDPGAKKLQLTMLPEEVLNEENVLNKHMIDEDEDDRIQLDEIEVDDELWGEIRRVTDYGAYIELGAVVRGFMHFMDHPLFGEVKGAHPKEFMRVGDRVRVWVLDVDSTQQRIKLTANRPSGLP--GPR 344
BLAST of mRNA_H-paniculata_contig10685.439.1 vs. uniprot
Match: A0A6U1NXG4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1NXG4_CYCTE) HSP 1 Score: 105 bits (263), Expect = 4.030e-22 Identity = 63/189 (33.33%), Postives = 106/189 (56.08%), Query Frame = 1 Query: 964 LKVGEWVEGKVRNVESYGAWVDIGLERDCLLHVREMSRT-FTPRARDAVSTKDVVRVRVTFVNADECKVGLSLIEEGPREGDLPPAPP---RPSISILDVSPGQQLWGHVERATNFGAYVDVGTEVPGFLHLKEIP--GRPKGVDAPEVLPRNRRLRVYAKEIDLEAKRIKLTCKRPKSKPRCGPKSAL 1512 L G + G V ++ ++GA++D+G E D LLH+ ++S T F D + D + V + + ++ K+ L+L+EE +E + P I + ++S +LWG ++R T++G+YV++G V GFLH + P G G + +R+RV+ ++DLE RIKLT KRP+ P GP+ +L Sbjct: 30 LVPGSKMRGTVISLTNFGAYIDVGTECDGLLHISQISNTDFIRHPSDVMKPGDEIEVIIKRKSNEQKKLHLTLLEE--KEENTPDQDEFDDEDRIPLKEISVDDELWGIIQRVTDYGSYVELGAAVTGFLHFMDHPYFGEVAGAHPSTYMEAGQRVRVWVSDVDLEKNRIKLTAKRPRDLP--GPRRSL 214
BLAST of mRNA_H-paniculata_contig10685.439.1 vs. uniprot
Match: W7TP35_9STRA (30s ribosomal protein s1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TP35_9STRA) HSP 1 Score: 110 bits (274), Expect = 9.310e-22 Identity = 77/230 (33.48%), Postives = 124/230 (53.91%), Query Frame = 1 Query: 805 NRAIAAARREKYTKKFFRKKKIYDIIKEKDRKEEREAVWATRWPRKVTRSAADLKVGEWVEGKVRNVESYGAWVDIGLERDCLLHVREMS-RTFTPRARDAVSTKDVVRVRVTFVNADECKVGLSLIEEGPREGDLPPAPPRPSISILDVSPGQQLWGHVERATNFGAYVDVGTEVPGFLHLKEIPGRPKGVDAPEVLPRNRRLRVYAKEIDLEAKRIKLTCKRPKSKPR 1491 N+A +R++Y ++ +K + +++ K+R+E W R R+ +L++G EG V V+ +GA+VD G +D + +R++S R F ARD V D V V +++ E V SL+ + A + +V +LWG V + +N+GA+VDVG EV GFLH+ P R +G +V RLRV+A E+D + +R+KLT +RP+S PR Sbjct: 127 NKARFRDQRDEYLEEM---RKAFKLMQIKERQESG-FKWVKRPKRERQIPLGELELGSRHEGVVITVKEHGAYVDFGATKDGFVRLRDLSDRDFVLDARDYVRPGDAVSFFVKYLSPAEGIVTGSLVPAEVETAEEQEA----RTGLEEVEEDDELWGEVTKVSNYGAFVDVGAEVQGFLHVIYYPRRSEGALTQDVFFPGMRLRVWAMEVDRDRRRLKLTGERPRSLPR 348
BLAST of mRNA_H-paniculata_contig10685.439.1 vs. uniprot
Match: A0A7S2K1Z0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K1Z0_9STRA) HSP 1 Score: 108 bits (269), Expect = 3.190e-21 Identity = 65/175 (37.14%), Postives = 98/175 (56.00%), Query Frame = 1 Query: 973 GEWVEGKVRNVESYGAWVDIGLERDCLLHVREMSRT-FTPRARDAVSTKDVVRVRVTFVNADECKVGLSLIEEGPREGDLPPAPPRPSISILDVSPGQQLWGHVERATNFGAYVDVGTEVPGFLHLKEIP--GRPKGVDAPEVLPRNRRLRVYAKEIDLEAKRIKLTCKRPKSKP 1488 G+ V V +++ +GA+VDIG RD LLHV +MS F RD +S D + V+V +V+A+ K+ ++++ P E D I + +V +LWG +++ T++GAYVD+G V GFLH + P G +G L +R+RV+ +D E RIKLT RP S P Sbjct: 245 GQEVNATVISLKPFGAYVDIGSSRDALLHVSDMSEEKFVEHPRDLLSPGDAIDVKVKYVDAENEKLAVTMVAL-PEESD-DDXXXEDLIQLDEVDIDDELWGEIKKVTDYGAYVDLGAVVEGFLHFMDHPDYGLHQGAHPSAYLKAGQRIRVWVSNVDEELDRIKLTGNRPSSLP 417
BLAST of mRNA_H-paniculata_contig10685.439.1 vs. uniprot
Match: A0A1E7FWG2_9STRA (S1-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FWG2_9STRA) HSP 1 Score: 103 bits (257), Expect = 4.370e-20 Identity = 63/183 (34.43%), Postives = 100/183 (54.64%), Query Frame = 1 Query: 982 VEGKVRNVESYGAWVDIGLERDCLLHVREMSRTF-TPRARDAVSTKDVVRVRVTFVNADECKVGLSLIEEGPRE-----GDLPPAPPRPSISILDVSPGQQLWGHVERATNFGAYVDVGTEVPGFLHLKEIPGRPKGVDAPEVLPRNRRLRVYAKEIDLEAKRIKLTCKRPKSKPRCGPKSAL 1512 V G V ++ YGA+VDIG E D LLH+ +++R F R ++ D V VR+ ++ + K+ L++++ E D + + +LWG ++R T+FGAYV+VG EV GFLH + P G E + R +R+RV+ ++D+E RI++T RP++ P GPK L Sbjct: 177 VTGTVISLIPYGAYVDIGTECDGLLHISQITRKFFVEHPRQVLTPGDEVTVRIHKISPELKKMQLTMLDVADVEVSLVGSDNDDDDSEEKTPLTEFELDDELWGELKRVTDFGAYVEVGAEVDGFLHFMDHPLWEDGAQPFEFMERGQRVRVWVADLDMEKNRIRVTATRPQNLP--GPKFEL 357 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10685.439.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10685.439.1 >prot_H-paniculata_contig10685.439.1 ID=prot_H-paniculata_contig10685.439.1|Name=mRNA_H-paniculata_contig10685.439.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=576bp MTRRRSTIASIIFATASCSCNRDGGASRASGFLAAPQPEASTLRGRQKSGback to top mRNA from alignment at H-paniculata_contig10685:442..7728- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10685.439.1 ID=mRNA_H-paniculata_contig10685.439.1|Name=mRNA_H-paniculata_contig10685.439.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7287bp|location=Sequence derived from alignment at H-paniculata_contig10685:442..7728- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10685:442..7728- >mRNA_H-paniculata_contig10685.439.1 ID=mRNA_H-paniculata_contig10685.439.1|Name=mRNA_H-paniculata_contig10685.439.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3456bp|location=Sequence derived from alignment at H-paniculata_contig10685:442..7728- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |