mRNA_H-paniculata_contig10684.438.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig10684.438.1
Unique NamemRNA_H-paniculata_contig10684.438.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig10684.438.1 vs. uniprot
Match: D7FM38_ECTSI (SGNH_hydro domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM38_ECTSI)

HSP 1 Score: 328 bits (842), Expect = 1.420e-107
Identity = 152/249 (61.04%), Postives = 190/249 (76.31%), Query Frame = 1
Query:    1 EQEAARPRIVCFGDSLTQFGFDPERAGWLALLAHWWERRFDVINRGFSGYNTRWLLPLTSRLFVEGTTAAPIKLVIVFLGANDCVLPGNGQHVPVEEYKSNLKEIVAHVRKVHPRSKLLLIAPPPIHEAKWANNRGLQQRDMDRKLEVTLSYSKACEEVGVDVSVPVLNTFSVMGEGDQGLAEKYLHDGVHFTADGNRALFRAVQDVIIQEFPELDPNTGAAGYI---QAPYWRDVDPINPVESVLRDI 738
            ++EA RP+++CFGDSLTQFGFD ER GWL+LLAHWWERRFDV+NRGFSGYNTRWL+PL  RLFV G    P+KLV +FLGANDCVLPGN Q+VP++EYK NLK + AHVR VH  ++L+LI PPPIHE KW  +R  Q RDMDRK E T+SY+ AC EVG ++   V++ + +MG G +  A++YLHDGVHFTA+GNR LF  V+  I   FPEL P+T   G +   QAP++ +VDP NP +SVLR +
Sbjct:   43 QREAVRPKVICFGDSLTQFGFDAERLGWLSLLAHWWERRFDVVNRGFSGYNTRWLMPLMDRLFVPGGNT-PVKLVTIFLGANDCVLPGNAQYVPLQEYKENLKLMAAHVRTVHKEARLMLITPPPIHERKWMEHRQFQARDMDRKQEATMSYAVACAEVGKEIGAKVVDAYRLMGSGAEDAADEYLHDGVHFTAEGNRRLFEGVKAEIRASFPELVPDTEEEGGVVSMQAPHFSEVDPTNPRDSVLRGL 290          
BLAST of mRNA_H-paniculata_contig10684.438.1 vs. uniprot
Match: A0A836CKV6_9STRA (SGNH hydrolase-type esterase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKV6_9STRA)

HSP 1 Score: 199 bits (505), Expect = 3.950e-57
Identity = 110/261 (42.15%), Postives = 152/261 (58.24%), Query Frame = 1
Query:    7 EAARPRIVCFGDSLTQFGFDPERAGWLALLAHWWERRFDVINRGFSGYNTRWLLPLTSRLFVEGTTAAPIKLVIVFLGANDCVLPGNGQHVPVEEYKSNLKEIVAHVRKVHPRS-----------------KLLLIAPPPIHEAKWANNRGLQQRDMDRKLEVTLSYSKACEEVGVDVSVPVLNTFSVMGEGDQGLAEKYLHDGVHFTADGNRALFRAVQDVIIQEFPELDPNTGAAGYIQAPYWRDVDPINPVESVLRDI 738
            E+A PR++ FGDS+TQ+GFD E+ GWLA + +    R  VI              +  RLF  G  A P  LV VFLG ND VLPG  QHVP+ EY++N+  IV H+R  +P +                 +L+LIAP P+H  KW  +R  Q R +DR  E TL Y++AC  +  D+ VP ++  + +G GDQ LA+KYLHDG+H +A+GN  LF  +Q  I+  +P LDP+T     +QAP+   VD  +P ES+LRD+
Sbjct:   41 ESAPPRMIAFGDSVTQYGFDAEKMGWLAQVCNV-HLRLHVI--------------MLDRLFKAGA-AQPTALVTVFLGINDAVLPGEKQHVPLPEYRANMNAIVNHLRTAYPDAAKRLMVPSQCPSAPFCVQLVLIAPAPVHLGKWEAHRAKQGRPLDRSQEHTLQYARACLALARDMGVPAVDLHTALGSGDQELADKYLHDGLHLSAEGNAVLFTELQRTILAAYPHLDPDTMK---MQAPWHGHVDEDSPEESILRDL 282          
BLAST of mRNA_H-paniculata_contig10684.438.1 vs. uniprot
Match: A0A397VC46_9GLOM (SGNH hydrolase n=2 Tax=Gigaspora TaxID=4873 RepID=A0A397VC46_9GLOM)

HSP 1 Score: 178 bits (452), Expect = 1.190e-49
Identity = 95/245 (38.78%), Postives = 147/245 (60.00%), Query Frame = 1
Query:   22 RIVCFGDSLTQFGFDPERAGWLALLAHWWERRFDVINRGFSGYNTRWLLPLTSRLFVEGTTAA---PIKLVIVFLGANDCVLPGNGQHVPVEEYKSNLKEIVAHVRK-----VHPRSKLLLIAPPPIHEAKWANNRGLQQRDMDRKLEVTLSYSKACEEVGVDVSVPVLNTFSVMGEGDQGLAEKYLHDGVHFTADGNRALFRAVQDVIIQEFPELDPNTGAAGYIQAPYWRDVDPINPVESVLR 732
            +IV FGDS+TQ+G DPE  GW+A L   + R+ +V+NRGFSGYNT W   L  +L  +  + +    I L+I+F GAND V+  + QHV +++YK NL  +V  ++       +P +K+LLI PPP+ E  W      +  +M+RK ++T  Y++ C E  ++++VPV+N + ++   D    + YL DG+H  + GN+ LF +V DVI   +P++DP      +   P WRDVDP   +ES L+
Sbjct:    7 QIVLFGDSITQYGHDPETNGWVAALQSSYVRKLEVLNRGFSGYNTEWAKILLPQLLPKNYSPSNFPKIILLIIFFGANDAVIESSIQHVNIDKYKENLIYMVNLIKNPTSPYYNPETKILLITPPPMDENSWEETCASKGDEMNRKADITKKYAEVCVETALELNVPVVNLWKIIN--DHVTVKDYLSDGLHLNSLGNKTLFISVMDVIKSSWPDIDPENVQDLF---PNWRDVDP-KILESSLK 245          
BLAST of mRNA_H-paniculata_contig10684.438.1 vs. uniprot
Match: A0A167JE47_PHYB8 (SGNH_hydro domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167JE47_PHYB8)

HSP 1 Score: 176 bits (447), Expect = 7.110e-49
Identity = 98/250 (39.20%), Postives = 155/250 (62.00%), Query Frame = 1
Query:   22 RIVCFGDSLTQFGFDPERAGWLALLAHWWERRFDVINRGFSGYNTRWLLPLTSRLFV---EGTTAAPIKLVIVFLGANDCVLPGNGQHVPVEEYKSNLKEIVAHVRK-----VHPRSKLLLIAPPPIHEAKW---ANNRGLQQRDMDRKLEVTLSYSKACEEVGVDVSVPVLNTFSVM----GEGDQGLAEKYLHDGVHFTADGNRALFRAVQDVIIQEFPELDPNTGAAGYIQAPYWRDVDPINPVESV 726
            +IV FGDS+TQF FDP   G+ A +A+ ++R+ DV+NRGFSGYNT W +P+  +L     +    A I+L+ +F GAND  LP + QHVP+E+YK NL+E+++ VR       +P  +L+LI PPPI+E +W       G+Q   +DRK E T  Y++    VG +  +PV+N +  +     E ++ L++ +L DG+H ++ GN+  +    +VI   FPEL P+   A  ++ PY+RD+DP N ++++
Sbjct:    7 KIVLFGDSITQFSFDPLFQGFGASIANAYQRKIDVMNRGFSGYNTTWAIPILRQLLPTVEQQKQPAKIQLLTIFFGANDGALPISFQHVPLEKYKKNLEELISMVRSPSSPYYNPSLRLVLITPPPINEVQWKVVCEENGIQ---LDRKFETTRLYAECARNVGKEHKIPVINLWDEILDRAKEQNRDLSQ-FLSDGLHLSSLGNQTAYELFMEVINTHFPELHPD---ALEMELPYFRDIDPKNYLDAL 249          
BLAST of mRNA_H-paniculata_contig10684.438.1 vs. uniprot
Match: A0A0L0HIV6_SPIPD (SGNH_hydro domain-containing protein n=1 Tax=Spizellomyces punctatus (strain DAOM BR117) TaxID=645134 RepID=A0A0L0HIV6_SPIPD)

HSP 1 Score: 176 bits (447), Expect = 7.320e-49
Identity = 98/219 (44.75%), Postives = 134/219 (61.19%), Query Frame = 1
Query:   22 RIVCFGDSLTQFGFDPERAGWLALLAHWWERRFDVINRGFSGYNTRWLLPLTSRLF--VEGTTAAPIKLVIVFLGANDCVLP-GNGQHVPVEEYKSNLKEIVAHVRKVHPRSKLLLIAPPPIHEAKWANNRGLQQRDMDRKLEVTLSYSKACEEVGVDVSVPVLNTFSV-MGEG---DQGLAEKYLHDGVHFTADGNRALFRAVQDVIIQEFPELDPNT 657
            +I+ FGDSLTQ+ F+PE  GW A L++ + R+ DV+NRGFSGYNT W   + + +   V  +  A I+LV VFLGAND  LP    QHVP+  Y+ NL  I+A +R     +++LLI PPPIHE KW  + G + R ++  +  TL Y  AC EV  +  VP+L+T+ V  GEG   ++  A+  L DGVH    GNR L  AV   I+ E+P+L P T
Sbjct:   18 QILLFGDSLTQWSFNPEIEGWGAFLSNSYVRKLDVVNRGFSGYNTEWCKHIIAPILRTVLPSPGAQIRLVTVFLGANDATLPFWPQQHVPLSAYRDNLHSIIASIRNFSSNTRILLITPPPIHEGKWQKHCGQKGRSINLSVSNTLQYRNACIEVAREAKVPLLDTWEVYFGEGATYNEEKADAVLSDGVHLANLGNRLLGHAVLAKILTEWPDLAPET 236          
BLAST of mRNA_H-paniculata_contig10684.438.1 vs. uniprot
Match: A0A8H7SZK1_9FUNG (SGNH_hydro domain-containing protein n=1 Tax=Thamnidium elegans TaxID=101142 RepID=A0A8H7SZK1_9FUNG)

HSP 1 Score: 176 bits (445), Expect = 1.760e-48
Identity = 96/250 (38.40%), Postives = 149/250 (59.60%), Query Frame = 1
Query:   22 RIVCFGDSLTQFGFDPERAGWLALLAHWWERRFDVINRGFSGYNTRWLLPLTSRLFV----EGTTAAPIKLVIVFLGANDCVLPGNGQHVPVEEYKSNLKEIVAHVRK-----VHPRSKLLLIAPPPIHEAKWANNRGLQQRDMDRKLEVTLSYSKACEEVGVDVSVPVLNTFSVM----GEGDQGLAEKYLHDGVHFTADGNRALFRAVQDVIIQEFPELDPNTGAAGYIQAPYWRDVDPINPVESVLR 732
            +I+ FGDS+TQF FDPE  G+ ALLA+ + R+ DV+NRGFSGYNT W LP+  +L      +  TA  I L+ +F GAND  LP + QHVP++ +KSN K ++  V+       +P+ +L+LI PPPI+E +W          ++R  E   +Y++  +EVG +   PV + +S +    G  D+ L+E +L DG+H  A+G + L+  +   I + +PE+ P+  A GY + PYWRD+  ++     L+
Sbjct:    9 QIILFGDSITQFSFDPELCGFGALLANIYVRKLDVLNRGFSGYNTDWALPILKQLLPSIKEQKETANSIPLMTIFFGANDGALPFSPQHVPLDRFKSNTKAMIDLVKNPESPLYNPKMRLILITPPPINEVQWRKQCENNGEKLNRTNEAARAYAECIKEVGRETGTPVADIWSKIMDKIGRDDRDLSE-FLLDGLHLNANGYKELYNLLLSTITERYPEIHPD--AVGY-ELPYWRDLLAVDNTLEALQ 254          
BLAST of mRNA_H-paniculata_contig10684.438.1 vs. uniprot
Match: A0A7S3FS29_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FS29_9CHLO)

HSP 1 Score: 174 bits (441), Expect = 4.310e-48
Identity = 97/247 (39.27%), Postives = 142/247 (57.49%), Query Frame = 1
Query:   16 RPRIVCFGDSLTQFGFDPERAGWLALLAHWWERRFDVINRGFSGYNTRWLLPLTSRL---FVEGTTAAPIKLVIVFLGANDCVLPGN---GQHVPVEEYKSNLKEIVAHVRKVHPRS--KLLLIAPPPIHEAKWANNRGLQQRDMDRKLEVTLSYSKACEEVGVDVSVPVLNTFSVMGEGDQGLAEKYLHDGVHFTADGNRALFRAVQDVIIQEFPELDPNTGAAGYIQAPYWRDVDPINPVESVLR 732
            R +IV FGDS+TQ  F  + +GW A +   ++R+ D++NRG+SGYNTRW   L   +   F  G+ A    ++ +F GAND  L       QHVP+ EYK+NL +++  VR  H     +++LI PPP+HE  WA   G  +   +R LE +  Y+ AC+EV  +  +PV++++S +    QG  E    DG+H +A GN  LF A+  VI+ + P L P+   A  + AP WRD+DP N  ES  R
Sbjct:    5 RTKIVLFGDSITQQAFSTKHSGWAAAVNDAYQRKVDIVNRGYSGYNTRWASQLVHEVSSHFASGSPANGRDILTIFFGANDASLADGTAAAQHVPIAEYKANLGKLIDFVRSDHGSRAPQIVLITPPPVHERSWAKFCG--EETSNRSLEESKRYAAACKEVAAEKGLPVVDSWSALHSKAQGDLEGLFWDGLHLSARGNTLLFEALMGVILGKLPGLAPD---ALPLDAPLWRDIDPKN-YESSFR 245          
BLAST of mRNA_H-paniculata_contig10684.438.1 vs. uniprot
Match: A0A433PGK1_9FUNG (SGNH hydrolase-type esterase domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PGK1_9FUNG)

HSP 1 Score: 175 bits (444), Expect = 7.530e-48
Identity = 111/303 (36.63%), Postives = 160/303 (52.81%), Query Frame = 1
Query:   22 RIVCFGDSLTQ-------------------FGFDPERAGWLALLAHWWERRFDVINRGFSGYNTRWLLPLTSRLFVEGTTAAP--IKLVIVFLGANDCVLPGNGQHVPVEEYKSNLKEIVAHVRK-----VHPRSKLLLIAPPPIHEAKWANNRGLQQRDMDRKLEVTLSYSKACEEVGVDVSVPVLNTFS-----------------VMG-----------------EGDQGLAEKYLHDGVHFTADGNRALFRAVQDVIIQEFPELDPNTGAAGYIQAPYWRDVDPINPVESV-LRDIKNG 747
            +IV FGDS+TQ                   FGFDP   GW A LA+ ++RR DV+NRG+SGYNT W LP+  +L     + +P  I L+++F GAND  LP + QHVP+  Y+SNL+ ++A           P ++LLLI PPP++E  WA    L+ ++ DRK EVT  Y++   EVG +V VPV++ ++                 VM                  E ++GL+E +L+DG+H T +GNR L +AV   I   +PELDP T     +  P+WR++D  N   S+    +K G
Sbjct:    7 QIVLFGDSITQCARANDSQSADYLADCFSQFGFDPN-GGWGAALANDYQRRVDVMNRGYSGYNTDWALPILQQLLPLAASRSPATILLLVIFFGANDAALPPSPQHVPLARYRSNLRALLALTSDPASPYYSPETRLLLITPPPLNEQAWAEKCRLEGKETDRKREVTEGYARVVREVGAEVGVPVVDAWAEILREAGERVETERKTTVMEKNSGLDVEIFKNRKCKVENERGLSE-FLNDGLHLTPEGNRVLHKAVLAQIRVHYPELDPATMP---MALPWWREIDYTNYKHSLQFSPLKRG 304          
BLAST of mRNA_H-paniculata_contig10684.438.1 vs. uniprot
Match: A0A068RYD1_9FUNG (Sgnh hydrolase n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RYD1_9FUNG)

HSP 1 Score: 175 bits (444), Expect = 9.090e-48
Identity = 94/237 (39.66%), Postives = 150/237 (63.29%), Query Frame = 1
Query:   22 RIVCFGDSLTQFGFDPERAGWLALLAHWWERRFDVINRGFSGYNTRWLLPLTSRLFV----EGTTAAPIKLVIVFLGANDCVLPGNGQHVPVEEYKSNLKEIVAHVRK-----VHPRSKLLLIAPPPIHEAKWANNRGLQQRDMDRKLEVTLSYSKACEEVGVDVSVPVLNTFSVMGE--GDQGLAEKYLHDGVHFTADGNRALFRAVQDVIIQEFPELDPNTGAAGYIQAPYWRDV 699
            RIV FGDS+TQF FDPE +G+ A LAH ++RR DV+NRGFSGYNT+W LP+  +L      +   A+ ++L+ +F GAND  LP + QHVP+E+YK NL+++++ V+       +P ++L+LI PPP+ EA+W  N       ++R  E    Y+ A  EV  + +V V + ++++ E  GD    E YL+DG+H +A GNRA+ + +  +I + F ++ P+      ++ P+WR++
Sbjct:   68 RIVLFGDSITQFSFDPELSGFGAGLAHSYQRRMDVMNRGFSGYNTKWALPILRQLLPTTEQQKQHASQVQLMTIFFGANDAALPFSDQHVPLEQYKDNLRKMISMVKSPDSPFYNPTTRLVLITPPPLDEAQWEKN---CDGPLNRTFESAKQYAAAVREVAKECNVVVADLWTMLVEESGDTHFGE-YLNDGLHLSAKGNRAVHQLLMKLIKEHFNDIHPDNLP---MEIPWWRNL 297          
BLAST of mRNA_H-paniculata_contig10684.438.1 vs. uniprot
Match: S2J3N8_MUCC1 (SGNH_hydro domain-containing protein n=3 Tax=Mucor TaxID=4830 RepID=S2J3N8_MUCC1)

HSP 1 Score: 171 bits (434), Expect = 7.110e-47
Identity = 95/253 (37.55%), Postives = 148/253 (58.50%), Query Frame = 1
Query:   22 RIVCFGDSLTQFGFDPERAGWLALLAHWWERRFDVINRGFSGYNTRWLLPLTSRLFV----EGTTAAPIKLVIVFLGANDCVLPGNGQHVPVEEYKSNLKEIVAHV-----RKVHPRSKLLLIAPPPIHEAKWANNRGLQQRDMDRKLEVTLSYSKACEEVGVDVSVPVLNTFSVMGEG---DQGLAEKYLHDGVHFTADGNRALFRAVQDVIIQEFPELDPNTGAAGYIQAPYWRDVDPINPVESVLRDIKN 744
            +IV FGDS+TQF FDPE  G+ ALLA+ + R+ DVINRGFSGYNT W LP+  +L      +   A  I L+ +F GAND  LPG+ QHVP++ +K N KE++  V     R  +P+ +L+LI PPPI+E +W          ++R  E   SY++   ++G + + PV + +S + +    +Q     +L DG+H  A+G R L+  +  +I +++ E+ P+    GY  A YW+D+   +P++     +KN
Sbjct:    9 QIVLFGDSITQFSFDPELKGFGALLANIYVRKLDVINRGFSGYNTDWALPILRQLLPTHKEQQDQACSIPLMTIFFGANDAALPGSPQHVPLDRFKQNTKEMIDLVKNPQSRYYNPKLRLILITPPPINEVQWGKRCEQDGGKLNRTNEAARSYAECISDIGRETNTPVADIWSRLMDKVHQEQRNLSDFLLDGLHLNANGYRELYDVLLQIISEKYNEIHPDN--LGYELA-YWKDLLTQDPIDLQFPLLKN 258          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10684.438.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FM38_ECTSI1.420e-10761.04SGNH_hydro domain-containing protein n=1 Tax=Ectoc... [more]
A0A836CKV6_9STRA3.950e-5742.15SGNH hydrolase-type esterase domain-containing pro... [more]
A0A397VC46_9GLOM1.190e-4938.78SGNH hydrolase n=2 Tax=Gigaspora TaxID=4873 RepID=... [more]
A0A167JE47_PHYB87.110e-4939.20SGNH_hydro domain-containing protein n=1 Tax=Phyco... [more]
A0A0L0HIV6_SPIPD7.320e-4944.75SGNH_hydro domain-containing protein n=1 Tax=Spize... [more]
A0A8H7SZK1_9FUNG1.760e-4838.40SGNH_hydro domain-containing protein n=1 Tax=Thamn... [more]
A0A7S3FS29_9CHLO4.310e-4839.27Hypothetical protein n=1 Tax=Chloropicon roscoffen... [more]
A0A433PGK1_9FUNG7.530e-4836.63SGNH hydrolase-type esterase domain-containing pro... [more]
A0A068RYD1_9FUNG9.090e-4839.66Sgnh hydrolase n=2 Tax=Lichtheimia TaxID=688353 Re... [more]
S2J3N8_MUCC17.110e-4737.55SGNH_hydro domain-containing protein n=3 Tax=Mucor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10684contigH-paniculata_contig10684:1111..6481 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score111.3
Seed ortholog evalue2.9e-22
Seed eggNOG ortholog2880.D7FM38
Hectar predicted targeting categoryother localisation
EggNOG free text desc.lipid catabolic process
EggNOG OGsCOG0214@1,KOG3035@2759
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1322
Cds size330
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928771.6572797-UTR-H-paniculata_contig10684:1110..16791622928771.6572797-UTR-H-paniculata_contig10684:1110..1679Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10684 1111..1679 -
1691480613.5250304-UTR-H-paniculata_contig10684:1110..16791691480613.5250304-UTR-H-paniculata_contig10684:1110..1679Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10684 1111..1679 -
1622928772.015968-UTR-H-paniculata_contig10684:2580..26191622928772.015968-UTR-H-paniculata_contig10684:2580..2619Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10684 2581..2619 -
1691480613.5578482-UTR-H-paniculata_contig10684:2580..26191691480613.5578482-UTR-H-paniculata_contig10684:2580..2619Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10684 2581..2619 -
1622928772.0337574-UTR-H-paniculata_contig10684:3385..34921622928772.0337574-UTR-H-paniculata_contig10684:3385..3492Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10684 3386..3492 -
1691480613.566307-UTR-H-paniculata_contig10684:3385..34921691480613.566307-UTR-H-paniculata_contig10684:3385..3492Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10684 3386..3492 -
1622928772.0519447-UTR-H-paniculata_contig10684:4118..43361622928772.0519447-UTR-H-paniculata_contig10684:4118..4336Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10684 4119..4336 -
1691480613.5749474-UTR-H-paniculata_contig10684:4118..43361691480613.5749474-UTR-H-paniculata_contig10684:4118..4336Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10684 4119..4336 -
1622928772.0664866-UTR-H-paniculata_contig10684:6422..64811622928772.0664866-UTR-H-paniculata_contig10684:6422..6481Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10684 6423..6481 -
1691480613.5845115-UTR-H-paniculata_contig10684:6422..64811691480613.5845115-UTR-H-paniculata_contig10684:6422..6481Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10684 6423..6481 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928771.6777122-CDS-H-paniculata_contig10684:1679..19581622928771.6777122-CDS-H-paniculata_contig10684:1679..1958Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10684 1680..1958 -
1691480613.540375-CDS-H-paniculata_contig10684:1679..19581691480613.540375-CDS-H-paniculata_contig10684:1679..1958Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10684 1680..1958 -
1622928771.908138-CDS-H-paniculata_contig10684:2529..25801622928771.908138-CDS-H-paniculata_contig10684:2529..2580Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10684 2530..2580 -
1691480613.5488775-CDS-H-paniculata_contig10684:2529..25801691480613.5488775-CDS-H-paniculata_contig10684:2529..2580Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10684 2530..2580 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10684.438.1prot_H-paniculata_contig10684.438.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig10684 1680..2580 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig10684.438.1

>prot_H-paniculata_contig10684.438.1 ID=prot_H-paniculata_contig10684.438.1|Name=mRNA_H-paniculata_contig10684.438.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp
MDRKLEVTLSYSKACEEVGVDVSVPVLNTFSVMGEGDQGLAEKYLHDGVH
FTADGNRALFRAVQDVIIQEFPELDPNTGAAGYIQAPYWRDVDPINPVES
VLRDIKNGS*
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mRNA from alignment at H-paniculata_contig10684:1111..6481-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10684.438.1 ID=mRNA_H-paniculata_contig10684.438.1|Name=mRNA_H-paniculata_contig10684.438.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5371bp|location=Sequence derived from alignment at H-paniculata_contig10684:1111..6481- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGCAGGAGGCCGCTCGTCCAAGGATCGTCTGCTTCGGCGATAGCCTCAC TCAGTTCGGGTAAGCAAGATCTTGACCTGCGTTTATTTTGTCTTGCCGTT GCAGGTGAAAAAGGTGCGAAGGTCAACGATGAAGTGCAATAAAATTTCTG GTTCAGGGCCCCTCGCTGACAGTAGTAAATACAGCCAGTAGGGTGCGCAC ACAAATTGGCAGGAAAGGCAAGTCCCTCTATCTAATGCAGCTTAGGTTGT TGTATACCCTTTCAGTGACAAACCAGAGGCGCCAGCTGGAAGTCGGTCAA ATTGGAGCGCTGGTAACCATGGCAACGTTCCTTGTCACTGGTTAATTTGG TCTATCGTTGTTGTACATGGCTACAGTTTTCCCGTGAAGTTACAGTAGAT CAAGATATCGAGGTCATGAAATGTGGATACTTCTACATTACAGTGCATCA GCCCCAATCCCCTCTGCCGCGTAAAATACCTTGAGGAGGACATTTGGCCT CTGTATTGTGGCTGCGGTCATCTGGAGTGTGTATTGTGCCGTTGGCGGAG CATGTGCTATTCAGTTTGGCATTGTGGTGTTGATTTTCGGCACCTCTTGG TTTTGAGGTCTTTGATGGTCTCGTCCCGTTCGTGATTTTTTTTTTTTATC CCCCAGGAGACCACAGCAAAACCTTTCTTTTGATACTCGCACTGGGATAG TTATGTAGGTCCGTCCACCTTTCGTACGGGAGTTCTATTATGATGTTTCC ATCATTTTTTTACCTGCCCAAGGTATCCGTGATCCCGCAGGCAGGTGGAC CACTCACAGCTTAGGCGCTGATGTGCCGCTGTCAAACACACAGGCAATAT ATTTAGGACTAAGACCAATTCTTATGGCAGGACTATTTTTGGGCGATTGT TTTTTTTTTCTGACTAGTTTCGCCCCGAAAAAAAAAATGATACAAGGTAT GGATATATATATATTTTTTTTCGAGAGAGTGACCCCCGTTTTCTTCAGAC CCCCTCAAACGACCCAAGTAGGTTAAAATTCCCCTCACTTATACGTGGTT CAGAGGAATAAATAACTCTGTTCTGTTAAAGGAAATGTAGACGTACTTCG GTAGAAATACCTAAGTATGGAAGCATCGGATAAAGGTTTTTGCCTTAGCC TTCCGGGGGTTAAAAAAAAATAAAATTGTACCTGGTTTCGGGTAGGGGGA CAATATTCCCGAACCAGTATATTTATTTGCGGGGTTTGCCGCACGCATTT GGAGGGTTCCATGATCATGATGGTAGCCAATTACAACACACCCATGCAGC ACGTACCTGTAACACCTTGCACATCTCTCTCACACAAGAATTGATACTGA CTGTTTGTCACATGGGTCACACGTCACACGTTGACACCGACATAGTCAAG CTAGATATATGGTGTCGAGGCGATAGCCGCGGGAGTGTAGCCTTGCAGGA GCACCTAAAGCCTCCATTGCTGGGTAACTCTGGCGACCTTCAGCTACTGC TATAATGCTGTCAAATGCTGCCGCTGTTGTCGTGGATGACGATGGCTACA ACGACGGCAATCCTAAATTTCATCCCGCCTGCACCTTAAATCACCCTTTG TGAAACCGACCGATGACACACAGCATGAATACGTAAACTACGCAGTATGT GTACATCGTGTTCGATCTGGAAGACAACAAAACCCAGGCCAAAGTCCACC CGCAACACGAGTAAAGAACAGTCAACGTACGTGGATACCTCATCGCGATG GAATATAGATGACAGTTAAGTGTGTATCTTTCCATGCTCCACTGTCGATT TATTTCTGACTGCTATTTTTTCACCAGGCTCGGTCACGACTCGCACATTT TTTTTTTTTTTGCGAGTGTATTTTTCCCCGGCCTAAAGTGACGGCCAAGA AAAACAATATCTCGAAAAACTCGTGACATTAGAAGTTTTCCTTAGGGCAA AAATGTGACCCGCACCCACTGAAACCCTTGAAATGCCTCCTAAATTTCCC CAGTACTCGGGCTACCCTATCCATTCGAGCTTTGGTCCGTAGTGTTCCGT TCGTGATACGAGCTGAAATCGTCAGGGAAAAAAAAGAAACAAATTTGATT ACTCCAAACTTGAATGTACATAATTTGCGTATTGCAAATTCACAGCTTCG ACCCTGAGAGGGCGGGATGGCTGGCGCTACTGGCTCACTGGTGGGAAAGG CGATTTGACGTCATCAATCGAGGCTTCAGCGGTTACAACACCAGGTGGCT CTTGCCGTTGACCAGTAGACTCTTCGTCGAGGGCACGACAGCCGCGCCGA TCAAGCTCGTCATTGTTTTCCTGGGCGCCAACGATTGCGTCCTGCCCGGC AATGGCCAACACGGTCAGTAGGCACTGCCCGTGTTCTGTTGAAAATGATC TAATCGATAGCAGCAAGGTCAAGCTGGTTACGTTCACTTGTAAAAACTCA AATCACAAGCAACACCCCCGGGCAGAATACATGCGCGCGGCCCCAGAGCG GGGGATGGTAAGCGGGTTAAAGTTTGGAGTCTCGCAGTTGTCGGGGCTTA CGGTCTGATTTCGCTTTGTCCTGGAGACGAGGTAGAGGATGACACCGATT CCGAACTCAATCACACATTCCGTAGAGGTTCAACCTCAACCTCCTGTTCA ATCATTTTTTTCTTTTCTTTTCTGAATCACGTCGTTAAGTTCATTAGTCG GTTTTGCTCGGTCGATTCAGTCATTGGGTTATTTTTGGTTTTGAAGCCAG TAACGGCTCTTCCCTGCGCGGCGACGCGCAAAGGATGGGTCGACACCGCC GACGTTCGAGCGGCTATCGCAAGCATCCGGTGACAGAGTTGTGGGGTTGA TAATTTGGTTCATAAGCTTACTGCGAAATGTCGGGACAAGCTTGGCTGAA AAATATATATATTCTACTACCGTGGTGCTTCCCATTTCGTGTGTTTGTTT TGTGTTTGCTTCTAATGATGATGTGGACGCACTGTGAAGTGCCCGTTGAA GAGTACAAGAGCAACCTGAAAGAGATTGTGGCCCACGTGCGTAAAGTGCA CCCGAGGTCAAAGCTTCTGCTCATAGCGCCGCCACCCATCCACGAGGTAA GTAATCGAGTATGTATGTAACGAAGGTAGGGCTAATCGTAGAACATGACG ACCGTGCGCCGATATGACAGCGATGCCGTCCTCCTGATCTGGTTAGGTCG TTTCATCTGTCCTGGTAGCAGTCATTGGCGACCACTTCGCATTTCTCTTG TTTCGATTGTTTCTTGCTTTGTGTTTGCTACTTGGCTCTCTAGTTGATAT GCGAAAATGGACACCGGTGAGCGGTAATCCGCCGTCCCTCCATCTACAAC AGTTCAGACAATTGTCGCTGAGTAGCCACATTTGGGAGGATAGCGAAGGG TCTAAACATGCCGAAGGAGCCTTATGAAGGAGGCAGACAGAAATATAAGA CGGAAAGGCACACAAAAATAATTTGTGACATTCGACGCCTGCCCCCGCCC CACTATTCCCTTGCCTGTCCGTGTCACGACGTATTACGGACGAACATAAA AATCAGGAGCATTTTTTTTGTTTTGTCGGAAACTGAATTTTGTTTTTCCC CGTTGGTCTACAGATTTTCGCTTCTAGCTGAAAACAAAAACACACTCTAA AAACACTTGCACAGGTATGCAGCAACCGATTGGTGCATATCGTATTGCAT GAGTTACATCTCAAAATGTCAATTTTCTAATTTGCTCCTGATTATTATGT TCCTCCGTAATAGTTATTTTTGTCGCTCTCGTGACTTTGTCCATGACTCT GTCAGTTTGATTCATTTTTGATCTCCTTCGATGTGTGTGTATGCGCGTGT ATTTCTGGGCAGGCAAAGTGGGCGAACAATAGAGGCTTACAACAGCGGGA CATGGACCGCAAGTTAGAGGTCACCCTTTCATATTCCAAAGCTTGCGAAG AGGTAGGAGCCAAGTAGACCGAATTATTGCCGTTGAGCTTGGTGTTGCGA GGGCCCGACACTTCGGTGTCAATGGTAAAGTTTCATGCGATATCCTGACC CCCAGGTTGCCGGGCACACGAGATACTTGGGACTACCCGTGCTTTTGTAT GTACTTGGCACCAGCCACCCTCACTTCTACACTTCATCTGTACCCTGTTC TTATCGATAAGCTTCGTAGCACAGGACGTCAAATCGTAGCGAGGTCAGAC ATTTTTGCGTGCTCGTTATTTAAAAAAAACCACACGAGCCTCTCTCTCGC AGCGCACCTACTCGCTCGTCACGTTTTTTTTTTCATCTTTTTTCACGTGA ATGGAAAACTGCCATGATTCACCGAAACGTCCGACACACAGAGGATTTGC AACATATCCTGACAACGAGTGTATTTACTCATTTTTTCTATATAGTATAC TAGGATTTCGTAGGTTACGAAATTGGTGTTAGCTGGTCGTACGTGCAATA AACACAGCGTTGAACTACTCCACTATTCCAACCTCCTTTTGCCCCAAAAC TTGACACAAACGTATTCAATCAGGTGGGCGTGGACGTGTCGGTGCCTGTG CTGAATACCTTCAGCGTCATGGGCGAGGGTGACCAGGGCCTAGCAGAAAA GTACTTGCACGATGGCGTACATTTCACGGCCGACGGCAACCGGGCGTTGT TTCGCGCAGTACAGGACGTTATTATCCAGGAATTTCCGGAATTGGACCCT AACACGGGCGCGGCGGGGTACATCCAAGCGCCTTACTGGCGCGATGTAGA TCCGATTAACCCTGTTGAGAGCGTGCTTCGTGATATTAAGAACGGGTCGT GACAATGTGTATGCGGTAGTGGTGTCTACACGGTTGCTCTGGGTATTTGT TAGTCGCTGGGGCGGCGCCCATGAATTGCAGCTGCCGACTGACCGTTTGA CCAATTGTTGCGTCGGGGTAGCTTTGATGAAGCAACAGGTGATGCTGGGG GCATGTTCGACTGTCTCTGTCGGTTACTGCGGGTGCTGCGACGCAGCAAC GTTGTAATGTATCAACTCTGTGTTTTAGTTGCTGCGGCTGGTGCGCTTTA ATGGGCAAATTTGTTTGTGTGTGTGCATGCATTTTCTGGTTTAGTTTTTT TATTGATTTTGCATTTGTTGTTGGGATTATCTCTGTCTTACTGCCATTGT AAAAAAATGTGCCGTTCAAGTTCGGTGTGTGGTTTGCTGTAAGTGTAGGC AAACGAGGCGGCTGCCTATTCGCATATTTGTGTGGTTTTTTACACGCAAT GCCAAACAGAGTTTGGCGAAGTTTAATTTATGCCACGGTTACTGCTGGCA GGTACCGGGTTTGGTTATATTACGCGAAGAAAGGTAAAACCTAAATTCCA TTGTATCATCCAGGTTCTTAC
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Coding sequence (CDS) from alignment at H-paniculata_contig10684:1111..6481-

>mRNA_H-paniculata_contig10684.438.1 ID=mRNA_H-paniculata_contig10684.438.1|Name=mRNA_H-paniculata_contig10684.438.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=660bp|location=Sequence derived from alignment at H-paniculata_contig10684:1111..6481- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACCGCAAGTTAGAGGTCACCCTTTCATATTCCAAAGCTTGCGAAGA
GATGGACCGCAAGTTAGAGGTCACCCTTTCATATTCCAAAGCTTGCGAAG
AGGTGGGCGTGGACGTGTCGGTGCCTGTGCTGAATACCTTCAGCGTCATG
GGCGAGGGTGACCAGGGCCTAGCAGAAAAGTACTTGCACGATGGCGTACA
TTTCACGGCCGACGGCAACCGGGCGTTGTTTCGCGCAGTACAGGACGTTA
TTATCCAGGAATTTCCGGAATTGGACCCTAACACGGGCGCGGCGGGGTAC
ATCCAAGCGCCTTACTGGCGCGATGTAGATCCGATTAACCCTGTTGAGAG
CGTGCTTCGTGATATTAAGAACGGGTCGTGAGTGGGCGTGGACGTGTCGG
TGCCTGTGCTGAATACCTTCAGCGTCATGGGCGAGGGTGACCAGGGCCTA
GCAGAAAAGTACTTGCACGATGGCGTACATTTCACGGCCGACGGCAACCG
GGCGTTGTTTCGCGCAGTACAGGACGTTATTATCCAGGAATTTCCGGAAT
TGGACCCTAACACGGGCGCGGCGGGGTACATCCAAGCGCCTTACTGGCGC
GATGTAGATCCGATTAACCCTGTTGAGAGCGTGCTTCGTGATATTAAGAA
CGGGTCGTGA
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