mRNA_H-paniculata_contig10649.424.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig10649.424.1
Unique NamemRNA_H-paniculata_contig10649.424.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: D8LR81_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR81_ECTSI)

HSP 1 Score: 352 bits (904), Expect = 1.370e-117
Identity = 178/283 (62.90%), Postives = 211/283 (74.56%), Query Frame = 1
Query:   10 SYTLHETIASWPDVPNSSYWVLLSFPFLTLVACVIWLRVLWPCP--DASPKRFEPVSMKIADK------TEATSLSSGTSNGAYSSIEAGIANST--------TATVSDSSSGSSGSGR-VLEAGEVAGDYSRDWKGTFDMTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807
            S  L +T   WP+VP+ +YW L+S PFLTLVAC +WLRV+WPCP  D + K F P ++ + D       TE ++L    SNG Y S+E G  NS          +  S +S+GS+G+ + V+EAGEVAGDYS DWKGTFDMTL+   + WL VNI LT  ++P LF N EFW+LQ+PKL CMIAVSILAG LCR+FCPAD+ GYIMTSKNSWFKVNYTRKVQHFAAYLVPLLF PS +C C GTLELSWGVW T+IGFLVMIKP+RE +PLFMLQFNGLDRPE
Sbjct:    5 SEILEQTTHEWPNVPDETYWALVSLPFLTLVACCVWLRVVWPCPTRDNNLKDFTPATL-LGDAGGGGSVTERSALQDA-SNGGYYSVENGRGNSPGNGAGKGLPSGNSYTSTGSTGTNKSVIEAGEVAGDYSLDWKGTFDMTLVQVTVAWLAVNIGLTLWIQPTLFQNAEFWVLQVPKLACMIAVSILAGSLCRYFCPADDTGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFRPSPDCHCTGTLELSWGVWVTLIGFLVMIKPIREAVPLFMLQFNGLDRPE 285          
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: A0A6H5J7Y0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7Y0_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 4.210e-67
Identity = 109/191 (57.07%), Postives = 122/191 (63.87%), Query Frame = 1
Query:  379 MTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVN------------------------------------------------YTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807
            MTL++  + WL VNI LT  + P LF N +FW+LQ+PKL CMI VS+LAG LCR+FCPAD+ GYIMTSKNSWFKVN                                                YTRKVQHFAAYLVPLLF PS +C C GTLELSWGVW T+IGFLVMIKP+RE IPLFMLQFNGLDRPE
Sbjct:    1 MTLVLVTVAWLAVNIGLTLWIHPTLFQNAQFWVLQVPKLACMIVVSVLAGSLCRYFCPADDTGYIMTSKNSWFKVNGQTTAILRLFPYFVPVLDAPPSLVVLHFSLFSRLVIYFFLYFCWFQVNYTRKVQHFAAYLVPLLFRPSPDCYCTGTLELSWGVWVTLIGFLVMIKPIREAIPLFMLQFNGLDRPE 191          
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: A0A485K4N3_9STRA (Aste57867_62 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485K4N3_9STRA)

HSP 1 Score: 212 bits (540), Expect = 3.180e-63
Identity = 109/247 (44.13%), Postives = 144/247 (58.30%), Query Frame = 1
Query:   73 LLSFPFLTLVACVIWLRVLWPCPD--ASPKRFEPVSMKIADKTEATSLSSGTSNGAYSSIEAGIANSTTATVSDSSSGSSGSGRVLEAGEVAGDYSRDWKGTFDMTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807
            ++  P +TL+   + LR +WP P   A PK   P      DK +  ++                        ++ SS       + E GEVAGDY   W  TFDM  L+  + +LGV + LT+   P+ F++  FW++Q+PKLGCM+ VS+L GL+CR FC  DE GYI+T+KNS FKVNYTRK+QHFAAY+VPL+    V  D  G L L WG W TM+GF ++IKP+RE    FMLQFN LDRPE
Sbjct:   36 IILLPIVTLLLIYVLLRCVWPIPQSQALPKFAGPKYGATDDKDKLNTIKK----------------------TEKSS-------LCEEGEVAGDYEESWTSTFDMVFLIFMLAYLGVMLVLTYFYSPQYFSDINFWLMQLPKLGCMMLVSLLGGLVCRCFCNVDEKGYIITNKNSAFKVNYTRKLQHFAAYMVPLV----VKSDYHGPLALGWGDWFTMLGFFILIKPLRENFSFFMLQFNSLDRPE 249          
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: A0A6A4XMZ5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A6A4XMZ5_9STRA)

HSP 1 Score: 208 bits (529), Expect = 7.610e-62
Identity = 110/262 (41.98%), Postives = 146/262 (55.73%), Query Frame = 1
Query:   25 ETIASWPD-VPNSSYWVLLSFPFLTLVACVIWLRVLWPCPDASPKRFEPVSMKIADKTEATSLSSGTSNGAYSSIEAGIANSTTATVSDSSSGSSGSGRVLEAGEVAGDYSRDWKGTFDMTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807
            +TI  W   +       L+  P L+LV   + LR +W    +SP    P++  +      T  +S                                G +   GE AGDY  DW  TFD   L+  + +L V + LT+    +LF N EFW+ Q+PK+ CM+ VS+L GL+CRHFC  D+ GYIMT+KNS FKVNYTRK+QHFAAY+VPL+    ++   KG L L+WG + TMIGFLV+IKPVRE++  FMLQFN LDRPE
Sbjct:   17 DTIVHWAQHLTTVQTATLVGLPILSLVLIYVLLRWIWKPTSSSPTYSLPLAQSVPHYGATTQNASP------------------------------QGDICHEGEAAGDYDDDWTHTFDYVFLLGMVGYLVVMLVLTYFFHADLFTNPEFWLSQLPKVACMMLVSLLGGLICRHFCRVDQKGYIMTNKNSAFKVNYTRKLQHFAAYMVPLV----LHTSFKGPLALAWGDFFTMIGFLVLIKPVRESLSFFMLQFNSLDRPE 244          
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: A0A6G0WU79_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WU79_9STRA)

HSP 1 Score: 207 bits (528), Expect = 1.230e-61
Identity = 110/261 (42.15%), Postives = 152/261 (58.24%), Query Frame = 1
Query:   28 TIASWP-DVPNSSYWVLLSFPFLTLVACVIWLRVLWPCPDASPKRFEPVSMKIADKTEATSLSSGTSNGAYSSIEAGIANSTTATVSDSSSGSSGSGRVLEAGEVAGDYSRDWKGTFDMTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807
            T A+WP ++     W L+  P L+LV   + LR +W       K    V +    KT+            Y S +A                 +  G + E G+VAGDY   W  TFD+T L+  +V+L V + LT+    + F NT FW+ Q+PKL CM+ VS++ GL+CR FC  D+ GYI+T+KNS FKVNYTRK+QHFAAY+VPL+    ++ +  G + L+WG + TMIGFLV+IKP+RE++  FMLQFN LDRPE
Sbjct:    9 TTAAWPANMTKFELWTLVGLPILSLVLIYVLLRWIW-------KVVAHVPLPTTTKTQ------------YGSTDAD---------------KNAQGVLCEEGDVAGDYEESWTKTFDLTFLIGMVVYLVVMVVLTYIYHIDYFTNTSFWLSQLPKLVCMMVVSLIGGLICRCFCTVDDKGYIITNKNSAFKVNYTRKLQHFAAYMVPLV----LHTNFSGPIALAWGDFFTMIGFLVLIKPIRESLSFFMLQFNSLDRPE 231          
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: A0A8K1FL63_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FL63_PYTOL)

HSP 1 Score: 207 bits (527), Expect = 2.320e-61
Identity = 109/261 (41.76%), Postives = 150/261 (57.47%), Query Frame = 1
Query:   28 TIASWP-DVPNSSYWVLLSFPFLTLVACVIWLRVLWPCPDASPKRFEPVSMKIADKTEATSLSSGTSNGAYSSIEAGIANSTTATVSDSSSGSSGSGRVLEAGEVAGDYSRDWKGTFDMTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807
            T+  WP ++  +  WVL   P ++LV   + LRV+W  P   P+     S       E T+L+  T                                ++E GEVAGDY   W  TFD   L+  I++  V + LT    PEL ++ +FW++Q+PKLG M+ VS+L GL+CR+FC  DE GYI+T+K+S FKVNYTRK+QHFAAY+VPL+    +  +  G L L+WG + +M+GFLV+IKP+RE   LFMLQFN LDRPE
Sbjct:   13 TLPVWPHNMTTTEGWVLALIPAVSLVLIYVLLRVVWKVPTPLPRYTSAPSYGTTPADETTALNQITKPKTS---------------------------LVEEGEVAGDYQESWLRTFDFVFLIGMILYFIVMLILTDIYAPELLSSLDFWLMQLPKLGVMMFVSLLGGLVCRYFCDVDEKGYIITNKSSKFKVNYTRKLQHFAAYMVPLV----IKSEGHGPLGLAWGDFFSMLGFLVLIKPIRENSKLFMLQFNSLDRPE 242          
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: A0A1V9ZIB7_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZIB7_9STRA)

HSP 1 Score: 207 bits (526), Expect = 8.850e-61
Identity = 106/260 (40.77%), Postives = 147/260 (56.54%), Query Frame = 1
Query:   37 SWPD-VPNSSYWVLLSFPFLTLVACVIWLRVLWPCPDAS--PKRFEPVSMKIADKTEATSLSSGTSNGAYSSIEAGIANSTTATVSDSSSGSSGSGRVLEAGEVAGDYSRDWKGTFDMTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807
            SW D +  +    ++  PF+ L+   ++LR +W  P+ +  PK   P      DK         +                                + E G+VAGDY   W  TFDM  LV  +++L V + LTH   PE F  T+FW++Q+PKLGCM+AVS++ G++CR FC  D  GYI+T+K+S FKVNYTRK+QHFAAY+VPL+    ++ +  G L L+WG   TM+GFLV+IKP+RE+   FMLQFN LDRPE
Sbjct:   57 SWADNITFAEQATIVGLPFVALILIYVFLRCIWKVPEGTSLPKFAGPKYGSTDDKDHKIKKEKSS--------------------------------LCEEGDVAGDYEASWTKTFDMVFLVGMVIYLIVLLVLTHFYAPEYFTTTDFWLMQLPKLGCMMAVSLIGGIICRCFCDVDSKGYIITNKSSVFKVNYTRKLQHFAAYMVPLV----IHSNYHGPLALAWGDLFTMLGFLVLIKPIRESATFFMLQFNSLDRPE 280          
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: A0A6G0X3C0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X3C0_9STRA)

HSP 1 Score: 206 bits (524), Expect = 1.010e-60
Identity = 109/263 (41.44%), Postives = 149/263 (56.65%), Query Frame = 1
Query:   28 TIASWPD-VPNSSYWVLLSFPFLTLVACVIWLRVLWPCPDAS--PKRFEPVSMKIADKTEATSLSSGTSNGAYSSIEAGIANSTTATVSDSSSGSSGSGRVLEAGEVAGDYSRDWKGTFDMTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807
            T ASW + +     W ++  P +TL    I LR +WP P     PK   P      DK +  ++                      T  + SS       + E GEVAGDY   W  TFDM  L+  + +L + + LT    P+ F++T FW++Q+PKLGCM+ VS+L G++CR FC  D+ GYI+T+KNS FKVNYTRK+QHFAAY+VPL+    +  +  G L L+WG + TMIGF ++IKP+RE+    MLQFN LDRPE
Sbjct:   30 THASWAEHITAVELWTIILLPVVTLFLIYILLRCIWPIPQNQGLPKFAGPKYGSTDDKPQLNTI----------------------TKKEKSS-------LCEEGEVAGDYEESWTKTFDMVFLIFMLTYLIILLVLTALYSPQYFSDTTFWLMQLPKLGCMMLVSLLGGIICRCFCSVDDKGYIITNKNSAFKVNYTRKLQHFAAYMVPLV----IKSNYHGPLALAWGDFFTMIGFFILIKPLRESSSFLMLQFNSLDRPE 259          
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: A0A024TYM2_9STRA (Uncharacterized protein n=8 Tax=Aphanomyces TaxID=100860 RepID=A0A024TYM2_9STRA)

HSP 1 Score: 205 bits (522), Expect = 1.170e-60
Identity = 107/260 (41.15%), Postives = 145/260 (55.77%), Query Frame = 1
Query:   37 SWPD-VPNSSYWVLLSFPFLTLVACVIWLRVLWPCPD--ASPKRFEPVSMKIADKTEATSLSSGTSNGAYSSIEAGIANSTTATVSDSSSGSSGSGRVLEAGEVAGDYSRDWKGTFDMTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807
            SW D +  +    ++  P +TL    + LR +WP P   A PK   P      +K   TS+    S+                              + E GEVAGDY   W  TFDM  L+  +++L V + LT+   PE F +  FW++Q+PKLGCM+ VS++ G++CR FC  D+ GYI+T+KNS FKVNYTRK+QHFAAY+VPL+    +  +  G L L WG + TM+GF V+IKP RE +  FMLQFN LDRPE
Sbjct:   13 SWADDISLAQRLTIILLPVVTLFLIFVLLRWIWPVPQGQALPKFAGPKYGATDEKLSLTSIKKEKSS------------------------------LCEEGEVAGDYEDSWVNTFDMVFLIFMLLYLAVMVVLTYYFSPEYFTDPTFWLMQLPKLGCMMLVSLIGGIICRCFCTVDDKGYIITNKNSAFKVNYTRKLQHFAAYMVPLV----IKSNYHGPLALGWGDFFTMLGFFVLIKPFRENMSFFMLQFNSLDRPE 238          
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Match: T0QRL0_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QRL0_SAPDV)

HSP 1 Score: 205 bits (522), Expect = 2.590e-60
Identity = 108/261 (41.38%), Postives = 150/261 (57.47%), Query Frame = 1
Query:   34 ASWPD-VPNSSYWVLLSFPFLTLVACVIWLRVLWPCPDAS--PKRFEPVSMKIADKTEATSLSSGTSNGAYSSIEAGIANSTTATVSDSSSGSSGSGRVLEAGEVAGDYSRDWKGTFDMTLLVTQIVWLGVNIFLTHKLKPELFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFKVNYTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKPVRETIPLFMLQFNGLDRPE 807
            +SW D +  +    ++  P + L+   I+LR +W  P+ +  PK   P      DK     +    S+                              + E G+VAGDY   W  TFDM  L+  I++L V + LT+   PE F++ +FW++Q+PKLGCM+AVS+L GL+CR FC  D  GYIMT+K+S FKVNYTRK+QHFAAY+VPL+    ++ +  G L L WG + TM+GFLV+IKP+RE+   FMLQFN LDRPE
Sbjct:   42 SSWADHITLTQQVTIIGLPIVALILIYIFLRCIWKVPEGNSLPKFAGPKYGSTDDKDALNKIKKEKSS------------------------------LCEEGDVAGDYDAPWTQTFDMIFLLGMILYLVVLLVLTYLYAPEYFSSIDFWLIQLPKLGCMMAVSLLGGLVCRCFCEVDGKGYIMTNKSSVFKVNYTRKLQHFAAYMVPLV----IHSNYHGPLALGWGDFFTMLGFLVLIKPIRESATFFMLQFNSLDRPE 268          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10649.424.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR81_ECTSI1.370e-11762.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J7Y0_9PHAE4.210e-6757.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A485K4N3_9STRA3.180e-6344.13Aste57867_62 protein n=1 Tax=Aphanomyces stellatus... [more]
A0A6A4XMZ5_9STRA7.610e-6241.98Uncharacterized protein (Fragment) n=1 Tax=Aphanom... [more]
A0A6G0WU79_9STRA1.230e-6142.15Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
A0A8K1FL63_PYTOL2.320e-6141.76Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9ZIB7_9STRA8.850e-6140.77Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A6G0X3C0_9STRA1.010e-6041.44Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024TYM2_9STRA1.170e-6041.15Uncharacterized protein n=8 Tax=Aphanomyces TaxID=... [more]
T0QRL0_SAPDV2.590e-6041.38Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10649contigH-paniculata_contig10649:350..5412 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score352.1
Seed ortholog evalue2.4e-94
Seed eggNOG ortholog2880.D8LR81
Hectar predicted targeting categorysignal anchor
EggNOG OGs2CMNQ@1,2QR22@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size807
Cds size807
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10649.424.1prot_H-paniculata_contig10649.424.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig10649 350..5412 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928769.6376295-CDS-H-paniculata_contig10649:349..4601622928769.6376295-CDS-H-paniculata_contig10649:349..460Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10649 350..460 -
1691480612.5027645-CDS-H-paniculata_contig10649:349..4601691480612.5027645-CDS-H-paniculata_contig10649:349..460Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10649 350..460 -
1622928769.652692-CDS-H-paniculata_contig10649:852..9481622928769.652692-CDS-H-paniculata_contig10649:852..948Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10649 853..948 -
1691480612.5146437-CDS-H-paniculata_contig10649:852..9481691480612.5146437-CDS-H-paniculata_contig10649:852..948Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10649 853..948 -
1622928769.6721728-CDS-H-paniculata_contig10649:1451..15681622928769.6721728-CDS-H-paniculata_contig10649:1451..1568Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10649 1452..1568 -
1691480612.5280983-CDS-H-paniculata_contig10649:1451..15681691480612.5280983-CDS-H-paniculata_contig10649:1451..1568Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10649 1452..1568 -
1622928769.6871643-CDS-H-paniculata_contig10649:2401..25171622928769.6871643-CDS-H-paniculata_contig10649:2401..2517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10649 2402..2517 -
1691480612.5382257-CDS-H-paniculata_contig10649:2401..25171691480612.5382257-CDS-H-paniculata_contig10649:2401..2517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10649 2402..2517 -
1622928769.700822-CDS-H-paniculata_contig10649:3238..33751622928769.700822-CDS-H-paniculata_contig10649:3238..3375Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10649 3239..3375 -
1691480612.5476892-CDS-H-paniculata_contig10649:3238..33751691480612.5476892-CDS-H-paniculata_contig10649:3238..3375Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10649 3239..3375 -
1622928769.715081-CDS-H-paniculata_contig10649:5182..54121622928769.715081-CDS-H-paniculata_contig10649:5182..5412Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10649 5183..5412 -
1691480612.5592427-CDS-H-paniculata_contig10649:5182..54121691480612.5592427-CDS-H-paniculata_contig10649:5182..5412Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10649 5183..5412 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig10649.424.1

>prot_H-paniculata_contig10649.424.1 ID=prot_H-paniculata_contig10649.424.1|Name=mRNA_H-paniculata_contig10649.424.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=269bp
MGLSYTLHETIASWPDVPNSSYWVLLSFPFLTLVACVIWLRVLWPCPDAS
PKRFEPVSMKIADKTEATSLSSGTSNGAYSSIEAGIANSTTATVSDSSSG
SSGSGRVLEAGEVAGDYSRDWKGTFDMTLLVTQIVWLGVNIFLTHKLKPE
LFANTEFWMLQIPKLGCMIAVSILAGLLCRHFCPADENGYIMTSKNSWFK
VNYTRKVQHFAAYLVPLLFTPSVNCDCKGTLELSWGVWATMIGFLVMIKP
VRETIPLFMLQFNGLDRPE
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mRNA from alignment at H-paniculata_contig10649:350..5412-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10649.424.1 ID=mRNA_H-paniculata_contig10649.424.1|Name=mRNA_H-paniculata_contig10649.424.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5063bp|location=Sequence derived from alignment at H-paniculata_contig10649:350..5412- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGACTTTCGTACACACTGCACGAAACGATCGCGAGCTGGCCGGACGT GCCGAACTCAAGCTATTGGGTGCTTCTATCGTTTCCCTTCCTTACGTTAG TGGCCTGCGTGATCTGGCTTCGAGTGCTATGGCCATGTCCGGACGCTTCA CCAAAGCGATTCGAGCCGGTGTCGATGAAAATTGCAGACAAAACGGAGGC GACTTCTCTATCTTCTGGAACATCCAACGGGTATGTTGTTTGCTTTGTCT CTAACCAGGTGTACCCCATGTCTTGGTACGGAGTGGTGTTGGCCTTGGGC CATAGCTGTTCTTTGGTGGCGGAGTTCATGTTCGCATGTAGACGAAACAT AAAGTTGCAGGTAAAATTATGCGAAGAAACATGTTGTCCCTCCACCAGAT CAGACAGCGCGTCATAGCCACTGCCACTGGAGATTGCGAACCCTCTGTAG CTGCCTGGTGAGCACTTCGTTGTTGTGGAATGTAAGTCACCCCTTGTAAG GATTTCCTTTCAAACGGATGTAAACGCAGGTACAACAGGAGTAGTCGACC ACCATAGTTTGCGAGTAGGCTGCTTTTCCCAACTCATGAAAAGCTACTCA CTGACTGTATCGTCTGTGCTCCCTCATCGTACACGTACTGGTACTGGGGT ATCACTGCACCACCTTTGACCCAACTTTGATAACGTCTGCAGCAAGAGAG TGGTGTAACTGTTATTTAGGCTGATTGCGCGGGCGATTGGATCCATCGCC CGCTCTACCCTACGTAAATGCACCCTGTCTGAAGTTACAACAATGAGCAA TACATGAATATCTGCAAGATACGGAAACCGGCTCGAACGGCACTTTGTGT ACTTCGCATATTAGCAAGGAGTACAGAGTGCGCTCAAGTTTTCCGTCACC ATACCAGACCTAAATACAACCACAGTATGCTTCGCTGATGCCGTCACAAT GAATTGCGCATTACCTGCACATATGGTTTGGCCTCTCGCAGTACGAGCAG TTAGGCGCGTGTAAGCATCGTTCGCAACACTCGTTGAAGTTTATCATGAT TCTCTGCGAAATTGCATTTGCGAACCACGTAACAACTTCGTGCAACCATT GACTGGTCGCCAGCAGTTCCGAATCATGAAACATGAAGTCCACGAGATGC ACTACTGCACAGCATTCAGTGCAGTGTTGCAGATTTGCCGAAGTTTCCTT GATCTAGATGAATGCATTCGGTTTACGCTACCATAACTTGGTCTCTAAAT GCAGCCCAGCCGCAGCCACGTTCGTGTTCGCTGGAAACGCCGTTTTCCGG TGTTGTTGTAGGGCAATTCGCTCTTTGTATCATGAACCTGGAGTTCAATT GTGTGACGTTTGTTACCTCGTTGTCCTTTCCAGAGAACACGAACGTGGCT GTGGCTGGGCTGCATTTAAAGACCAAGTTATCTACTCTAACCTACTGAAG GTGGACAACGGCCTGAAATTCGCCCTGTACGGTGGGTTCTTTTGTATATC CTATCCAGAGAACCAAAAACGCCCGGTTACAAACACAGCATTCCATTGGC CTGCACGCACATGCATCCACATGCACCCTGCCAACGACCCTTAGCTCAGA TGTATGCTCTGTCAACGGACACAAATGTCGCATTTCAACGCAGTCAAGTC TGCCAAGGCACACACAAAATGCTCTGCCAACGCAGACTAGAATCAACAGT TTGGAGTTTTACAAACCTTAGTTTTTTAGTGTCAGCCTAACAGAACTAAT TCATTAATTATCATCACAGAACAGCTTAGTTGGGTGCAGTGTGATAGGCT GACGAAAAGCAAAACAAACACTTGTGGGTAGTGACTTGACACCTCGAGAA TCGCGATACGGAAATTAATTATGCGCCCTATTCATGGCAGTTGCGTTTCT GATGAAAGATATTTGCTTTTAACCCTCTCTTGTGATGAAATTAACTTGCA GTTGATTGTGTCGTTCAGATGTCGAGTGATGAGCGGTGGTGTTACATCTT ATTTCTGTAAATATTATCCGTTAAACAAATTCCGCAGAGCCTACTCGTCG ATAGAAGCGGGAATCGCAAACAGTACAACTGCAACCGTCAGCGATTCGTC GAGCGGGAGCAGCGGGAGCGGAAGAGTGCTGGAAGCGGGTGAAGTGGCAG GAGACTACTCCAGAGATTGGAAAGGTAAACCGCGCCTCTTCTTCTCTTTC AATATTTTCCTATCACAATTATCTTGATCGATTTGTAGTCTGTCGCCTGT CTCAACCAAAAACTTAAACAACAAGCCAACCCTACTGAACCCAACTCATT ATCCTCTCCAACAAAATCGATACATATTTTCCTCTATAATCCACCTGTGT GCATTGTTCCCATTCAACAAAGCACAAGGTACGATCTCCCCTATACCCGA AAGCCAGCAATTGAAAGAACATGATTTTTTGTTGGAAGTGGACAGGTGCA AGGATCATGGTGGTTTAATTCAGGACATCTTATCTGGAATAGACGTTCAC TCTCATGCTCATGTATACATTCACATGGTTGGACTGAAAGGCGGTTGTAA TAATATATGAGCCGACGATTGATGATTGCTCCATCCAGCATTGAATGGAG ATGTGAATATGATATATCGTTGTTAGCGGAGTTCCAGCCGGAGTCATGCG AAATTGCGTCCCCGGTTGTCATACCAAAAAGTGTTTGCTGCTGGTGAAAG AAATGATCTTCACCAGTGGCAATGATGGATGTGTTGTTATTAATATCATC ACGATCAATTAACTTGATATCCAGAGTAATTTCTTCACGTTATTTTCTTC TTTTTGTATCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGGCTTGGT TGCTCGCTCGCTCACTCTCGCTTTGCCGAAAATGAACGAACACAGGGACG TTCGACATGACGCTGCTCGTCACCCAGATCGTGTGGCTTGGTGTCAACAT CTTCCTTACACACAAGCTCAAGCCGGAGCTCTTTGCAAACACCGAGTTCT GGATGTTGCAGGTGCGACGATGTTTCAATTTATTTGTTCCACGGAACAGT TTCATCCCCCCGGACAGATACAAATACAAATGAACAGTTTCATCCCCCCG GACAGATACAAATACTTGCAAATGATTTTCACAAAAAAAAAAAAAAAAAC TCGTTTGAGTTTCAGAATGAGAGGACAAATACAATAAAGTACCACCCCGG TCCATTCGATATACGAGTATTATGAGCAATCGTGGATGGTCCGGGGCACA TATAATACACGAGATCATTCTAAAATTCAGGTGAATACGTTCAGTTTTTG TCAAAACCATTTGCAAATATTCGTATTTGTCCAGCGGGTGCACAGTTTCG TTGTTCAGGGTTTATGGAATACATGTCCGCTTTTCTGCTGCCACTGACGT CGCCCGATGCACAGGGGATGAAAGTAGCGAATACAATGGTTTCGTTTTGT TTGGGTGATTACGTTTGTCAAAGTCTAATTAATACATAAACACGTTTCGA ACGTTTGGTGCGATATTGGATCTATACGATATTTATTATTATATCAGCCA CGACTAAGACGGTTATTTCAGATGGAATTCTAGTCAAAATTCCTGTCGAT ATGCTTGATATTTCAACATTGTTTTGGCGTAATTTTCGATAAGTTGATAG CATTTATATTAACTTCCCAACAGCTCTCGTTAAGCTCCTACGGTACTGTG TTACCGGGCTATAGACAACAGTGCCTTCCTTTGTGTAGTTTCACCCAGCG GTCGAGTTCCATCCAGGAGGATGACGTGAATTAACCCTTCTTCTGACGAT GAATCATCCGGCATCACACGCACACATTTTACTCTTTCGCACAGATCCCT AAGCTAGGGTGCATGATCGCTGTCTCCATCCTGGCCGGATTGTTGTGCCG ACACTTCTGTCCGGCGGATGAGAATGGATACATCATGACGTCCAAGAACT CCTGGTTTAAGGTGGGTAATGACTAATGCTAAATAGCAGGTTTTATATTA TGCACTAAACATGAACTTCTGGTTTTGTGGTAGAGTATGACAATTACAGC GATTAGTTACATGATGTAGCCTCACCAATCGTTTTCATGTGTTTTGCCGC ACGATTCAAATTGCGAACATGAGGGAAATTTTCATGTGAATCAAACAATA TCAACTAGTTAAAAAGTAAGACCTACCAGCGCAGATAGAGCATCGCGCTA GCTAACTATGGTAGAGCTAGATGGCCCACTTAAGGACGTAATGCCTGGGT GCACTATGCACTCAACTCTCGCTCGTTGAGTGGGACGGGTCATAATGACA AGACCCATGTGTGTCATTATCTAAATACCAAATGCAGTAAGATCCTAAAT ATGTTTTCTTGTTGTTCGAAGACTTGAAATGTTTTGTGCAATCCAACTAA CTCGGCCTTCGATTTTTTCAGTTTTCATGATACGTTATTGCGTTATTGCG ATCTGTATTCACAGGTGAATTACACGAGGAAGGTACAGCACTTTGCCGCT TACCTGGTGCCGTTGCTTTTCACTCCTTCCGTGAACTGCGATTGCAAGGG CACTCTCGAGGTAGGTTCCACTAGTAGAGCTTTTGTGTCTTCATGATTCC CTCTGGATCTTAATTGACGGTACCAGCCATTTTTGTGGGAAAATTTGAGA AGAAAATGGTGAGCACAAGGAATTGAGGCCATATCTTACTGGTGGGATGG ATTTTGCAAACCATCCTTTACACCACGGGGCGCTCAGGCTCATGGTCTAT CCTAACATTGGAAAATGACATGTTGGCTAAATATAAGACTTGAAAAACTC TCTCGCAATTCGGCACCACGGAGTCGGACACTCACTGTTCGTAGCATGCT TGACCTTGTGCTGGAATGATTCATACTATAATATACACAATCTGAACGCT CTCGTTGACGATGTCTTGGTTTATCTTGTCGTCTTGTATTTGCCGTTCGC AGCTGAGCTGGGGCGTGTGGGCTACCATGATCGGGTTCTTGGTTATGATC AAGCCTGTGCGCGAGACCATCCCCCTCTTCATGCTGCAGTTCAACGGCCT AGATCGCCCCGAG
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Coding sequence (CDS) from alignment at H-paniculata_contig10649:350..5412-

>mRNA_H-paniculata_contig10649.424.1 ID=mRNA_H-paniculata_contig10649.424.1|Name=mRNA_H-paniculata_contig10649.424.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1614bp|location=Sequence derived from alignment at H-paniculata_contig10649:350..5412- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGACTTTCGTACACACTGCACGAAACGATCGCGAGCTGGCCGGACGT
GCCGAACTCAAGCTATTGGGTGCTTCTATCGTTTCCCTTCCTTACGTTAG
TGGCCTGCGTGATCTGGCTTCGAGTGCTATGGCCATGTCCGGACGCTTCA
CCAAAGCGATTCGAGCCGGTGTCGATGAAAATTGCAGACAAAACGGAGGC
GACTTCTCTATCTTCTGGAACATCCAACGGATGGGACTTTCGTACACACT
GCACGAAACGATCGCGAGCTGGCCGGACGTGCCGAACTCAAGCTATTGGG
TGCTTCTATCGTTTCCCTTCCTTACGTTAGTGGCCTGCGTGATCTGGCTT
CGAGTGCTATGGCCATGTCCGGACGCTTCACCAAAGCGATTCGAGCCGGT
GTCGATGAAAATTGCAGACAAAACGGAGGCGACTTCTCTATCTTCTGGAA
CATCCAACGGAGCCTACTCGTCGATAGAAGCGGGAATCGCAAACAGTACA
ACTGCAACCGTCAGCGATTCGTCGAGCGGGAGCAGCGGGAGCGGAAGAGT
GCTGGAAGCGGGTGAAGTGGCAGGAGACTACTCCAGAGATTGGAAAGAGC
CTACTCGTCGATAGAAGCGGGAATCGCAAACAGTACAACTGCAACCGTCA
GCGATTCGTCGAGCGGGAGCAGCGGGAGCGGAAGAGTGCTGGAAGCGGGT
GAAGTGGCAGGAGACTACTCCAGAGATTGGAAAGGGACGTTCGACATGAC
GCTGCTCGTCACCCAGATCGTGTGGCTTGGTGTCAACATCTTCCTTACAC
ACAAGCTCAAGCCGGAGCTCTTTGCAAACACCGAGTTCTGGATGTTGCAG
GGACGTTCGACATGACGCTGCTCGTCACCCAGATCGTGTGGCTTGGTGTC
AACATCTTCCTTACACACAAGCTCAAGCCGGAGCTCTTTGCAAACACCGA
GTTCTGGATGTTGCAGATCCCTAAGCTAGGGTGCATGATCGCTGTCTCCA
TCCTGGCCGGATTGTTGTGCCGACACTTCTGTCCGGCGGATGAGAATGGA
TACATCATGACGTCCAAGAACTCCTGGTTTAAGATCCCTAAGCTAGGGTG
CATGATCGCTGTCTCCATCCTGGCCGGATTGTTGTGCCGACACTTCTGTC
CGGCGGATGAGAATGGATACATCATGACGTCCAAGAACTCCTGGTTTAAG
GTGAATTACACGAGGAAGGTACAGCACTTTGCCGCTTACCTGGTGCCGTT
GCTTTTCACTCCTTCCGTGAACTGCGATTGCAAGGGCACTCTCGAGGTGA
ATTACACGAGGAAGGTACAGCACTTTGCCGCTTACCTGGTGCCGTTGCTT
TTCACTCCTTCCGTGAACTGCGATTGCAAGGGCACTCTCGAGCTGAGCTG
GGGCGTGTGGGCTACCATGATCGGGTTCTTGGTTATGATCAAGCCTGTGC
GCGAGACCATCCCCCTCTTCATGCTGCAGTTCAACGGCCTAGATCGCCCC
GAGCTGAGCTGGGGCGTGTGGGCTACCATGATCGGGTTCTTGGTTATGAT
CAAGCCTGTGCGCGAGACCATCCCCCTCTTCATGCTGCAGTTCAACGGCC
TAGATCGCCCCGAG
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