mRNA_H-paniculata_contig10634.414.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A6H5JCV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV2_9PHAE) HSP 1 Score: 284 bits (726), Expect = 8.500e-84 Identity = 186/385 (48.31%), Postives = 212/385 (55.06%), Query Frame = 1 Query: 1 AEAGAGTERSHIFFDGLDNKRVHPLHQPPLCTCTGILASHTDWVTGLAAAEGRILASSSNDGTLKLWDLAATAEQTGDDTSDAEDM----------------------------GIVGDRERHEAHAGDRGGVANGRDGTRMGGALENGGARGRASTSRRRNTSSSRGPLLPRPKPLATVAGHGDYVKCLTYAPEGGVLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMD-----------------VVEGVGXXXXXXR----GEREGY-------EENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRVVS 987 A AG+ R D +++ HP QPP CTG+ ASHTDWVTGLA AEGRI+AS+S DGTLKLWDLAA D E G+ G + E AG+ G+ G G + A RA RP LATVAGHGDYVKCLTYA + GVLVSGGLDKRILLWDLQRM+APLM LR G GA ++ G R G+R+G E W HLRDP +V +R G AAAGPNEVLELCRQNKGSV+C+ + DASLVASGGTDRMIRLLDPRAG +AAK+CKLDGH DNVRCV+IDEGGTRVVS Sbjct: 75 ARGSAGSGRRDDADDADEHQLQHP--QPP---CTGVFASHTDWVTGLAVAEGRIMASASYDGTLKLWDLAAADRARNADKGGREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLGG---QGEEAAGEANGLRTGMHGVQDTAA--------RAXXXXXXXXXXXXXXXXXRPNALATVAGHGDYVKCLTYAEQRGVLVSGGLDKRILLWDLQRMSAPLMVLR-----GGSGAXXXXXXXXXXXXXXXXXXXXXMMNSAGYSPAAGRQQVGGQRQGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGAQAAKICKLDGHGDNVRCVKIDEGGTRVVS 438
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: D8LJZ3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ3_ECTSI) HSP 1 Score: 232 bits (592), Expect = 8.720e-67 Identity = 127/212 (59.91%), Postives = 137/212 (64.62%), Query Frame = 1 Query: 433 RPKPLATVAGHGDYVKCLTYAPEGGVLVSGGLDKRILLWDLQRMTAPLMTLR---------------------------IDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRVVS 987 RP LATVAGHGDYVKCLTYA + GVLVSGGLDKRILLWDLQRM+APLM LR +G G GE W HLRDP +V +R G AAAGPNEVLELCRQNKGSV+C+ + DASLVASGGTDRMIRLLDPRAG G+AAKVCKLDGH DNVRCV+IDEGGTRVVS Sbjct: 89 RPNALATVAGHGDYVKCLTYAEQRGVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGXXXXXXXXXXXXXXXXXXXXXXXXGYSPXXXXXXXXXXXQGAGAPWLSDEGE-------GGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVS 293
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: UPI000C1D0EB0 (WD repeat-containing protein 48-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D0EB0) HSP 1 Score: 77.8 bits (190), Expect = 1.090e-12 Identity = 56/178 (31.46%), Postives = 81/178 (45.51%), Query Frame = 1 Query: 451 TVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRV 981 T+ H DYV CL A ++ SGGL + +WDL+ AP+ EDDG + V G+G G N + LH ++A G E SVY L T+ +++ SGGT++++R+ DPR G +K KL GH DN+R + +D G V Sbjct: 121 TLRQHSDYVTCLAAAENNSNIVASGGLGGEVFIWDLEAAHAPVSKSNDAAEDDGAAS-----VNGLGSSLTNTSMRPIGSSNNIS-LHATQSQGYTP---ISAKGHKE----------SVYALATNNQGTILVSGGTEKVVRVWDPRTG----SKNMKLRGHTDNIRTLLLDSSGRLV 275
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A7J7H059_CAMSI (Uncharacterized protein n=1 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7H059_CAMSI) HSP 1 Score: 79.7 bits (195), Expect = 1.130e-12 Identity = 60/179 (33.52%), Postives = 81/179 (45.25%), Query Frame = 1 Query: 451 TVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRVV 984 T+ H DYV L AP+ V+ SGGL + +WDL+ AP EDD + V GVG R N+ LH+ V +AA G E SVY L + +L+ SGGT++++R+ DPR G +K KL GH DNVR + +D G V Sbjct: 385 TLRQHSDYVTSLAAAPKNSNVVASGGLGGEVFIWDLEAAVAPTSKTSDATEDD-----CSNGVNGVGNSVPITSA-RTISSNNSISLHMTQSHGYVP---IAAKGHKE----------SVYALGMNDSGTLLVSGGTEKVVRVWDPRTG----SKTMKLRGHTDNVRALLLDSTGRLVA 540
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A388M9C0_CHABU (Uncharacterized protein n=2 Tax=Chara braunii TaxID=69332 RepID=A0A388M9C0_CHABU) HSP 1 Score: 79.3 bits (194), Expect = 1.400e-12 Identity = 56/177 (31.64%), Postives = 81/177 (45.76%), Query Frame = 1 Query: 451 TVAGHGDYVKCLTYAPEGGVLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLEL---CRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGG 972 T+ H DYVK L A + ++ SGGL + +WDL+ T P+ R D G G ++A +D R G AG + + + +K SVY L + D +++ASGGT++ IR+ DPR G AK KL GH DN+RC+ +D G Sbjct: 135 TLRQHSDYVKALAAARQTNLVASGGLRCEVFVWDLEGSTVPVA--RAPMNDGASPMHDSGAYAGAGGMGVLGMPAGNSVHSSSA----QD------RSGCMGAGYSAITRTPVAFKGHKESVYALAMNDDGTVLASGGTEKAIRIWDPRTG----AKQMKLKGHSDNIRCLLLDPAG 295
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A7J9MVX9_GOSSC (Uncharacterized protein (Fragment) n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J9MVX9_GOSSC) HSP 1 Score: 75.1 bits (183), Expect = 2.340e-11 Identity = 58/184 (31.52%), Postives = 81/184 (44.02%), Query Frame = 1 Query: 451 TVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDD-----GGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRVV 984 T+ H DYV CL A V+ SGGL + +WD++ PL EDD G A ++ V R N+ H V +AA G E SVY L + + SL+ SGGT++++R+ DPR G +K KL GH DNVR + +D G ++V Sbjct: 126 TLRQHSDYVTCLAAAERNANVVASGGLGGEVFVWDIEAAVTPLSKSSDVMEDDCSNGINGSANSLPVSS-----------LRPISSNNSITAHTTQCPGYVP---IAAKGHKE----------SVYALAMNDNGSLLVSGGTEKVVRVWDPRTG----SKTMKLRGHTDNVRALLLDSTGRKLV 281
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A2G9H468_9LAMI (Uncharacterized protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9H468_9LAMI) HSP 1 Score: 73.6 bits (179), Expect = 2.950e-11 Identity = 53/181 (29.28%), Postives = 81/181 (44.75%), Query Frame = 1 Query: 445 LATVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAA-GPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRV 981 + T H DYV CL A + L SGGL + +WDL+ PL + +D G G+G N + + + + + P + GP + +K SVY L T+ +L+ SGGT++++R+ DPR G +K KL GH DN+R + +D G V Sbjct: 119 IRTFRQHSDYVTCLAAADKNSNFLASGGLGGEVFIWDLEAALTPL-----SKSNDANGDDCSTSTNGLGSSLP-----------NTSLRPISSSNNISVHPTQSQGYGPIAA----KGHKESVYALATNDRGTLLVSGGTEKVVRVWDPRTG----SKTMKLRGHTDNIRALLLDSTGRFV 275
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A7J9AWI9_9ROSI (Uncharacterized protein (Fragment) n=1 Tax=Gossypium laxum TaxID=34288 RepID=A0A7J9AWI9_9ROSI) HSP 1 Score: 72.0 bits (175), Expect = 3.290e-11 Identity = 54/175 (30.86%), Postives = 75/175 (42.86%), Query Frame = 1 Query: 451 TVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGG 972 T+ H DYV CL A V+ SGGL + +WD++ PL EDD G+ G + LR S P V + +K SVY L + + SL+ SGGT++++R+ DPR G +K KL GH DNVR + +D G Sbjct: 13 TLRQHSDYVTCLAAAERNANVVASGGLGGEVFVWDIEAAVTPLSKSSDVMEDD--------CSNGI-----------NGSANSLPISSLRPISSNNSITAHTTQCPGYVPIAAKGHKESVYALAMNDNGSLLVSGGTEKVVRVWDPRTG----SKTMKLRGHTDNVRALLLDSTG 164
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A453K871_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453K871_AEGTS) HSP 1 Score: 73.6 bits (179), Expect = 6.200e-11 Identity = 55/183 (30.05%), Postives = 80/183 (43.72%), Query Frame = 1 Query: 451 TVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPL---MTLRIDQEDDGGGARAMDVVEGVGXXXXXX--RGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRV 981 T+ H DYV CL A + ++ SGGL + +WDL AP+ + + D+ +G A+ + V G+ GY AA H K SVY LD + +L+ SGGT++++R+ DPR G +K KL GH DN+R + ID G V Sbjct: 232 TLRQHSDYVICLAAAEKNSNIVASGGLGGEVFIWDLDAAIAPIAKSVDAKEDEVPNGNSGPALSTLCNVNSSGNIVSTNGKSHGYSPIAAKGH----------------------------KDSVYALDMNDTGTLLVSGGTEKVVRVWDPRTG----SKNMKLRGHTDNIRALLIDSTGRFV 382
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: UPI000F60783A (WD repeat-containing protein 48 homolog n=1 Tax=Coffea eugenioides TaxID=49369 RepID=UPI000F60783A) HSP 1 Score: 72.4 bits (176), Expect = 7.000e-11 Identity = 57/181 (31.49%), Postives = 81/181 (44.75%), Query Frame = 1 Query: 445 LATVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRVV 984 + T+ H DYV CL A + ++ SGGL + +WDL+ AP EDD + V G G R N+ LH V +AA G E SVY L + +L+ SGGT++++R+ DPR G +K KL GH DN+R + +D G V+ Sbjct: 123 VRTLRQHTDYVTCLAAAEKNSNIVASGGLGGEVFIWDLETALAPHSKSSDATEDD-----CSNGVCGSGSSLPVSL--RPINSSNSISLHTTQSQGYVP---IAAKGHKE----------SVYALAMNESGTLLVSGGTEKVVRVWDPRTG----SKTMKLRGHTDNIRTLLLDSTGRFVL 279 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10634.414.1 >prot_H-paniculata_contig10634.414.1 ID=prot_H-paniculata_contig10634.414.1|Name=mRNA_H-paniculata_contig10634.414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=330bp AEAGAGTERSHIFFDGLDNKRVHPLHQPPLCTCTGILASHTDWVTGLAAAback to top mRNA from alignment at H-paniculata_contig10634:5305..8310+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10634.414.1 ID=mRNA_H-paniculata_contig10634.414.1|Name=mRNA_H-paniculata_contig10634.414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3006bp|location=Sequence derived from alignment at H-paniculata_contig10634:5305..8310+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10634:5305..8310+ >mRNA_H-paniculata_contig10634.414.1 ID=mRNA_H-paniculata_contig10634.414.1|Name=mRNA_H-paniculata_contig10634.414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1980bp|location=Sequence derived from alignment at H-paniculata_contig10634:5305..8310+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |