mRNA_H-paniculata_contig10634.414.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig10634.414.1
Unique NamemRNA_H-paniculata_contig10634.414.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A6H5JCV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCV2_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 8.500e-84
Identity = 186/385 (48.31%), Postives = 212/385 (55.06%), Query Frame = 1
Query:    1 AEAGAGTERSHIFFDGLDNKRVHPLHQPPLCTCTGILASHTDWVTGLAAAEGRILASSSNDGTLKLWDLAATAEQTGDDTSDAEDM----------------------------GIVGDRERHEAHAGDRGGVANGRDGTRMGGALENGGARGRASTSRRRNTSSSRGPLLPRPKPLATVAGHGDYVKCLTYAPEGGVLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMD-----------------VVEGVGXXXXXXR----GEREGY-------EENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRVVS 987
            A   AG+ R     D  +++  HP  QPP   CTG+ ASHTDWVTGLA AEGRI+AS+S DGTLKLWDLAA       D    E                              G+ G   + E  AG+  G+  G  G +   A        RA                 RP  LATVAGHGDYVKCLTYA + GVLVSGGLDKRILLWDLQRM+APLM LR      G GA                     ++   G      R    G+R+G        E    W HLRDP +V +R G AAAGPNEVLELCRQNKGSV+C+  + DASLVASGGTDRMIRLLDPRAG  +AAK+CKLDGH DNVRCV+IDEGGTRVVS
Sbjct:   75 ARGSAGSGRRDDADDADEHQLQHP--QPP---CTGVFASHTDWVTGLAVAEGRIMASASYDGTLKLWDLAAADRARNADKGGREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLGG---QGEEAAGEANGLRTGMHGVQDTAA--------RAXXXXXXXXXXXXXXXXXRPNALATVAGHGDYVKCLTYAEQRGVLVSGGLDKRILLWDLQRMSAPLMVLR-----GGSGAXXXXXXXXXXXXXXXXXXXXXMMNSAGYSPAAGRQQVGGQRQGAGAPWLSDEGEGGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGAQAAKICKLDGHGDNVRCVKIDEGGTRVVS 438          
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: D8LJZ3_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJZ3_ECTSI)

HSP 1 Score: 232 bits (592), Expect = 8.720e-67
Identity = 127/212 (59.91%), Postives = 137/212 (64.62%), Query Frame = 1
Query:  433 RPKPLATVAGHGDYVKCLTYAPEGGVLVSGGLDKRILLWDLQRMTAPLMTLR---------------------------IDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRVVS 987
            RP  LATVAGHGDYVKCLTYA + GVLVSGGLDKRILLWDLQRM+APLM LR                                           +G G       GE         W HLRDP +V +R G AAAGPNEVLELCRQNKGSV+C+  + DASLVASGGTDRMIRLLDPRAG G+AAKVCKLDGH DNVRCV+IDEGGTRVVS
Sbjct:   89 RPNALATVAGHGDYVKCLTYAEQRGVLVSGGLDKRILLWDLQRMSAPLMVLRGGSGXXXXXXXXXXXXXXXXXXXXXXXXGYSPXXXXXXXXXXXQGAGAPWLSDEGE-------GGWPHLRDPLRVALRAGQAAAGPNEVLELCRQNKGSVHCVAAAADASLVASGGTDRMIRLLDPRAGGGQAAKVCKLDGHGDNVRCVKIDEGGTRVVS 293          
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: UPI000C1D0EB0 (WD repeat-containing protein 48-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D0EB0)

HSP 1 Score: 77.8 bits (190), Expect = 1.090e-12
Identity = 56/178 (31.46%), Postives = 81/178 (45.51%), Query Frame = 1
Query:  451 TVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRV 981
            T+  H DYV CL  A     ++ SGGL   + +WDL+   AP+       EDDG  +     V G+G           G   N + LH            ++A G  E          SVY L T+   +++ SGGT++++R+ DPR G    +K  KL GH DN+R + +D  G  V
Sbjct:  121 TLRQHSDYVTCLAAAENNSNIVASGGLGGEVFIWDLEAAHAPVSKSNDAAEDDGAAS-----VNGLGSSLTNTSMRPIGSSNNIS-LHATQSQGYTP---ISAKGHKE----------SVYALATNNQGTILVSGGTEKVVRVWDPRTG----SKNMKLRGHTDNIRTLLLDSSGRLV 275          
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A7J7H059_CAMSI (Uncharacterized protein n=1 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7H059_CAMSI)

HSP 1 Score: 79.7 bits (195), Expect = 1.130e-12
Identity = 60/179 (33.52%), Postives = 81/179 (45.25%), Query Frame = 1
Query:  451 TVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRVV 984
            T+  H DYV  L  AP+   V+ SGGL   + +WDL+   AP        EDD       + V GVG         R     N+  LH+      V    +AA G  E          SVY L  +   +L+ SGGT++++R+ DPR G    +K  KL GH DNVR + +D  G  V 
Sbjct:  385 TLRQHSDYVTSLAAAPKNSNVVASGGLGGEVFIWDLEAAVAPTSKTSDATEDD-----CSNGVNGVGNSVPITSA-RTISSNNSISLHMTQSHGYVP---IAAKGHKE----------SVYALGMNDSGTLLVSGGTEKVVRVWDPRTG----SKTMKLRGHTDNVRALLLDSTGRLVA 540          
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A388M9C0_CHABU (Uncharacterized protein n=2 Tax=Chara braunii TaxID=69332 RepID=A0A388M9C0_CHABU)

HSP 1 Score: 79.3 bits (194), Expect = 1.400e-12
Identity = 56/177 (31.64%), Postives = 81/177 (45.76%), Query Frame = 1
Query:  451 TVAGHGDYVKCLTYAPEGGVLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLEL---CRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGG 972
            T+  H DYVK L  A +  ++ SGGL   + +WDL+  T P+   R    D            G G               ++A    +D      R G   AG + +       + +K SVY L  + D +++ASGGT++ IR+ DPR G    AK  KL GH DN+RC+ +D  G
Sbjct:  135 TLRQHSDYVKALAAARQTNLVASGGLRCEVFVWDLEGSTVPVA--RAPMNDGASPMHDSGAYAGAGGMGVLGMPAGNSVHSSSA----QD------RSGCMGAGYSAITRTPVAFKGHKESVYALAMNDDGTVLASGGTEKAIRIWDPRTG----AKQMKLKGHSDNIRCLLLDPAG 295          
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A7J9MVX9_GOSSC (Uncharacterized protein (Fragment) n=2 Tax=Gossypium TaxID=3633 RepID=A0A7J9MVX9_GOSSC)

HSP 1 Score: 75.1 bits (183), Expect = 2.340e-11
Identity = 58/184 (31.52%), Postives = 81/184 (44.02%), Query Frame = 1
Query:  451 TVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDD-----GGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRVV 984
            T+  H DYV CL  A     V+ SGGL   + +WD++    PL       EDD      G A ++ V              R     N+   H       V    +AA G  E          SVY L  + + SL+ SGGT++++R+ DPR G    +K  KL GH DNVR + +D  G ++V
Sbjct:  126 TLRQHSDYVTCLAAAERNANVVASGGLGGEVFVWDIEAAVTPLSKSSDVMEDDCSNGINGSANSLPVSS-----------LRPISSNNSITAHTTQCPGYVP---IAAKGHKE----------SVYALAMNDNGSLLVSGGTEKVVRVWDPRTG----SKTMKLRGHTDNVRALLLDSTGRKLV 281          
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A2G9H468_9LAMI (Uncharacterized protein n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9H468_9LAMI)

HSP 1 Score: 73.6 bits (179), Expect = 2.950e-11
Identity = 53/181 (29.28%), Postives = 81/181 (44.75%), Query Frame = 1
Query:  445 LATVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAA-GPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRV 981
            + T   H DYV CL  A +    L SGGL   + +WDL+    PL      + +D  G        G+G               N +   +   + + + P  +   GP       + +K SVY L T+   +L+ SGGT++++R+ DPR G    +K  KL GH DN+R + +D  G  V
Sbjct:  119 IRTFRQHSDYVTCLAAADKNSNFLASGGLGGEVFIWDLEAALTPL-----SKSNDANGDDCSTSTNGLGSSLP-----------NTSLRPISSSNNISVHPTQSQGYGPIAA----KGHKESVYALATNDRGTLLVSGGTEKVVRVWDPRTG----SKTMKLRGHTDNIRALLLDSTGRFV 275          
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A7J9AWI9_9ROSI (Uncharacterized protein (Fragment) n=1 Tax=Gossypium laxum TaxID=34288 RepID=A0A7J9AWI9_9ROSI)

HSP 1 Score: 72.0 bits (175), Expect = 3.290e-11
Identity = 54/175 (30.86%), Postives = 75/175 (42.86%), Query Frame = 1
Query:  451 TVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGG 972
            T+  H DYV CL  A     V+ SGGL   + +WD++    PL       EDD           G+            G   +     LR  S            P  V    + +K SVY L  + + SL+ SGGT++++R+ DPR G    +K  KL GH DNVR + +D  G
Sbjct:   13 TLRQHSDYVTCLAAAERNANVVASGGLGGEVFVWDIEAAVTPLSKSSDVMEDD--------CSNGI-----------NGSANSLPISSLRPISSNNSITAHTTQCPGYVPIAAKGHKESVYALAMNDNGSLLVSGGTEKVVRVWDPRTG----SKTMKLRGHTDNVRALLLDSTG 164          
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: A0A453K871_AEGTS (Uncharacterized protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453K871_AEGTS)

HSP 1 Score: 73.6 bits (179), Expect = 6.200e-11
Identity = 55/183 (30.05%), Postives = 80/183 (43.72%), Query Frame = 1
Query:  451 TVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPL---MTLRIDQEDDGGGARAMDVVEGVGXXXXXX--RGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRV 981
            T+  H DYV CL  A +   ++ SGGL   + +WDL    AP+   +  + D+  +G    A+  +  V          G+  GY   AA  H                            K SVY LD +   +L+ SGGT++++R+ DPR G    +K  KL GH DN+R + ID  G  V
Sbjct:  232 TLRQHSDYVICLAAAEKNSNIVASGGLGGEVFIWDLDAAIAPIAKSVDAKEDEVPNGNSGPALSTLCNVNSSGNIVSTNGKSHGYSPIAAKGH----------------------------KDSVYALDMNDTGTLLVSGGTEKVVRVWDPRTG----SKNMKLRGHTDNIRALLIDSTGRFV 382          
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Match: UPI000F60783A (WD repeat-containing protein 48 homolog n=1 Tax=Coffea eugenioides TaxID=49369 RepID=UPI000F60783A)

HSP 1 Score: 72.4 bits (176), Expect = 7.000e-11
Identity = 57/181 (31.49%), Postives = 81/181 (44.75%), Query Frame = 1
Query:  445 LATVAGHGDYVKCLTYAPEGG-VLVSGGLDKRILLWDLQRMTAPLMTLRIDQEDDGGGARAMDVVEGVGXXXXXXRGEREGYEENAAWLHLRDPSKVVMRPGVAAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVGRAAKVCKLDGHRDNVRCVRIDEGGTRVV 984
            + T+  H DYV CL  A +   ++ SGGL   + +WDL+   AP        EDD       + V G G         R     N+  LH       V    +AA G  E          SVY L  +   +L+ SGGT++++R+ DPR G    +K  KL GH DN+R + +D  G  V+
Sbjct:  123 VRTLRQHTDYVTCLAAAEKNSNIVASGGLGGEVFIWDLETALAPHSKSSDATEDD-----CSNGVCGSGSSLPVSL--RPINSSNSISLHTTQSQGYVP---IAAKGHKE----------SVYALAMNESGTLLVSGGTEKVVRVWDPRTG----SKTMKLRGHTDNIRTLLLDSTGRFVL 279          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10634.414.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCV2_9PHAE8.500e-8448.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJZ3_ECTSI8.720e-6759.91Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
UPI000C1D0EB01.090e-1231.46WD repeat-containing protein 48-like n=1 Tax=Olea ... [more]
A0A7J7H059_CAMSI1.130e-1233.52Uncharacterized protein n=1 Tax=Camellia sinensis ... [more]
A0A388M9C0_CHABU1.400e-1231.64Uncharacterized protein n=2 Tax=Chara braunii TaxI... [more]
A0A7J9MVX9_GOSSC2.340e-1131.52Uncharacterized protein (Fragment) n=2 Tax=Gossypi... [more]
A0A2G9H468_9LAMI2.950e-1129.28Uncharacterized protein n=1 Tax=Handroanthus impet... [more]
A0A7J9AWI9_9ROSI3.290e-1130.86Uncharacterized protein (Fragment) n=1 Tax=Gossypi... [more]
A0A453K871_AEGTS6.200e-1130.05Uncharacterized protein n=1 Tax=Aegilops tauschii ... [more]
UPI000F60783A7.000e-1131.49WD repeat-containing protein 48 homolog n=1 Tax=Co... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10634contigH-paniculata_contig10634:5305..8310 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score233.4
Seed ortholog evalue1.5e-58
Seed eggNOG ortholog2880.D8LJZ3
Preferred nameWDR48
KEGG koko:K15361
KEGG Pathwayko03460,map03460
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000724,GO:0000725,GO:0001501,GO:0003006,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006464,GO:0006508,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007275,GO:0007276,GO:0007283,GO:0007338,GO:0007548,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0008284,GO:0008406,GO:0008584,GO:0009566,GO:0009653,GO:0009790,GO:0009887,GO:0009893,GO:0009987,GO:0010468,GO:0010604,GO:0010628,GO:0016579,GO:0016787,GO:0019222,GO:0019538,GO:0019783,GO:0019953,GO:0022414,GO:0030162,GO:0030428,GO:0031323,GO:0031325,GO:0031396,GO:0031399,GO:0031401,GO:0031974,GO:0031981,GO:0032182,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032879,GO:0032880,GO:0032991,GO:0033554,GO:0034641,GO:0035264,GO:0035295,GO:0036211,GO:0036459,GO:0040007,GO:0040012,GO:0040017,GO:0042127,GO:0042592,GO:0042769,GO:0043130,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043588,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044703,GO:0045137,GO:0045862,GO:0046483,GO:0046546,GO:0046661,GO:0048232,GO:0048513,GO:0048518,GO:0048520,GO:0048522,GO:0048568,GO:0048589,GO:0048608,GO:0048609,GO:0048705,GO:0048731,GO:0048856,GO:0048872,GO:0050678,GO:0050679,GO:0050789,GO:0050794,GO:0050795,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051286,GO:0051606,GO:0051704,GO:0051716,GO:0060255,GO:0060341,GO:0061458,GO:0065007,GO:0065008,GO:0070011,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0072520,GO:0080090,GO:0090085,GO:0090304,GO:0090325,GO:0090326,GO:0101005,GO:0140096,GO:1901360,GO:1901564,GO:1902525,GO:1903003,GO:1903320,GO:1903322,GO:1903827,GO:1903829,GO:2000008,GO:2000010
EggNOG free text desc.regulation of protein monoubiquitination
EggNOG OGsKOG0308@1,KOG0308@2759
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03400
Exons3
Model size990
Cds size990
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10634.414.1prot_H-paniculata_contig10634.414.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig10634 5305..8310 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928768.252521-CDS-H-paniculata_contig10634:5304..56871622928768.252521-CDS-H-paniculata_contig10634:5304..5687Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10634 5305..5687 +
1691480611.9024322-CDS-H-paniculata_contig10634:5304..56871691480611.9024322-CDS-H-paniculata_contig10634:5304..5687Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10634 5305..5687 +
1622928768.265291-CDS-H-paniculata_contig10634:7130..75181622928768.265291-CDS-H-paniculata_contig10634:7130..7518Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10634 7131..7518 +
1691480611.9142854-CDS-H-paniculata_contig10634:7130..75181691480611.9142854-CDS-H-paniculata_contig10634:7130..7518Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10634 7131..7518 +
1622928768.2868705-CDS-H-paniculata_contig10634:8091..83101622928768.2868705-CDS-H-paniculata_contig10634:8091..8310Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10634 8092..8310 +
1691480611.9270203-CDS-H-paniculata_contig10634:8091..83101691480611.9270203-CDS-H-paniculata_contig10634:8091..8310Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10634 8092..8310 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig10634.414.1

>prot_H-paniculata_contig10634.414.1 ID=prot_H-paniculata_contig10634.414.1|Name=mRNA_H-paniculata_contig10634.414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=330bp
AEAGAGTERSHIFFDGLDNKRVHPLHQPPLCTCTGILASHTDWVTGLAAA
EGRILASSSNDGTLKLWDLAATAEQTGDDTSDAEDMGIVGDRERHEAHAG
DRGGVANGRDGTRMGGALENGGARGRASTSRRRNTSSSRGPLLPRPKPLA
TVAGHGDYVKCLTYAPEGGVLVSGGLDKRILLWDLQRMTAPLMTLRIDQE
DDGGGARAMDVVEGVGGGGGGGRGEREGYEENAAWLHLRDPSKVVMRPGV
AAAGPNEVLELCRQNKGSVYCLDTSVDASLVASGGTDRMIRLLDPRAGVG
RAAKVCKLDGHRDNVRCVRIDEGGTRVVS*
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mRNA from alignment at H-paniculata_contig10634:5305..8310+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10634.414.1 ID=mRNA_H-paniculata_contig10634.414.1|Name=mRNA_H-paniculata_contig10634.414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3006bp|location=Sequence derived from alignment at H-paniculata_contig10634:5305..8310+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCAGAAGCAGGAGCAGGAACAGAAAGATCCCACATTTTTTTCGACGGCTT GGACAATAAACGAGTCCATCCTCTTCATCAACCGCCGTTATGTACATGCA CCGGAATCCTGGCGTCTCACACGGACTGGGTCACCGGGCTCGCAGCCGCG GAGGGTCGCATTCTGGCATCGTCGTCTAACGACGGGACGCTCAAGCTCTG GGATCTCGCTGCGACGGCGGAGCAGACCGGAGATGACACCAGTGATGCGG AAGATATGGGGATAGTTGGGGACAGGGAAAGGCACGAAGCACACGCAGGC GATAGGGGGGGGGTTGCGAACGGAAGAGATGGCACGCGGATGGGGGGGGC ACTGGAGAATGGAGGTGCGCGCGGACGGGCTAGGTAATGGGTGTTAGGTG TTCGGTCGGGAGTGAGGAGTCAGTTGGACTAAAACTTCGAAGTTCTTTTT GTACCTCTATTGTACTCATGTTGAGGTTATGTAGCTTACTTTAATCTGCA CTTGCATACACTTTATCACCAATATTAGATTATGACCAATAAGGGGCTTG TTCATGTCTTGCATGTCGTAGTTGTTCCACCATTGAACACACGTCCTCGA GAGGGTGAAGCTTTGTTTCTATCGGAGCAAATTTCCGATGGTCAATGGCT TGTTCCTACGTTGTCAAATTAGGTTTGGGGGGCGTTGTTATGTTTGCATG CCATTGTTGTTGGACCAATGACCACGCATTCTCGAGGGTTAGGGCAGCCG GGGGGCTGTTTTGTGGGAACCAAGCGAATTCTAGACGTCTGAAGCGATTG CGAGGGAAGACGGGCAGTAGGGAACATAAGAAAGGAGCGTTGGTGTTGAA TTGTTTCGTGCTTTTGTGAGTCGGCTCGGAGAAGGCAGACGTTGGCTTCA AATTTCAGTCGTGTGCACTTATCAACGAAATGAAATAAATCAGAGGCAGG TGATGATTTTGTATATTAGTAATCGTGTTTTGCTCTGTTATATTGCGATT GCAGTTGGTAGGGAGTTGCGTTTTTTGCTTGATTTTTGGTCGATATGCAT GTGTGTGTAGTATTATTATTATCTACACGTTAGCCCGATCCTTCAGACCC CAGGGGCGGAGGGTAAATGGCGATCCGGTGGAACTGCATTAGTATCCGCT AACAAATGAGCAGTGAAAACGAATAGAGCCTTCAAAAACAGGAAAAAATC GCAGAGAGGTAAATTAACACACGTAACAAAAACAGTAAACAAAGTTAAGC AAAAGCAGAAAACACACGCGCCCAGGCCACACCGTTTATCAGGGTCGCCC GTCTTCAAAGACGAGGCAACAGGGTAAAATACTCTTGCGCGTGCCGGGCG TGGGTCTTCGCTACCCCGGCTGCGTTCCATGCACGCATATAACCAGCCGC TACTTTCTCCATGATAGCGTCCCAGTAGGCGGCATCGACTATTGCATGTG CCTCACAGATTGTGGTCGGGATGCCAAAGTCGTTGACGTCTTCGACGATA CATTGTGGCCGTTGCTTCGCGAGCGGGCTCCTGCCCCATAATTTTGTGTG TAATTTTTTTTTCCTATCTTGAAAAAGGTATATTTCATTTCGTTTTTTCG CACGCACGAATTTCGTGCTGTGTCATGTTTATGTTACCCTCCCCCTGCCA CAATCATCAGTTTCTATTCCTTTTGCCCATTCTATTGCTCCAGTTTTCCC TTTCTCTTCCTAATACACGCACTCACACCAGTACCTACGGACCTCACCCA CCCCTCTAACCCTCCTGCCCCCCACCAATTCCCCTGCCCCAACGAAAGGT CTAGCCAATAACAACAATACTAACAGCACCTCGCGGCGACGAAACACGTC ATCAAGTCGCGGTCCTCTTCTGCCCCGCCCGAAGCCCCTGGCAACAGTTG CCGGACATGGCGACTACGTCAAGTGCCTGACATACGCCCCCGAGGGGGGG GTGCTTGTTTCGGGCGGGTTGGACAAACGTATTCTCTTGTGGGATTTGCA GAGAATGACTGCCCCCCTGATGACCCTTCGCATAGACCAGGAAGACGACG GTGGAGGTGCCAGGGCGATGGATGTAGTGGAGGGTGTCGGCGGCGGCGGC GGCGGCGGGAGGGGGGAGAGAGAGGGCTACGAAGAAAACGCGGCGTGGCT TCACTTGAGGGATCCCTCGAAAGTGGTTATGAGGCCGGGGGTAGCGGCCG CTGGACCCAACGAGGTTGGTGCTTGTTGGGTGGAATATGTGCAAGCGTAA GAGCCCGCGGGGGGACAGGAGAGAGGGGCTTGGGGGGGGCGACAGTGGAA ATCACTTGACCATTAAAAGCTTGAGGTGTTATCGATAAGATAGGTGATGA TGTAGTGTTATTGTTCAGCGCTCGATATCGGGACGTCACCTATCAAACAC GTGAAGGGGATGGGGCGCACCGGTCAATCCGCTTGCTTTATTCTGACTGT TATGTGTTTTTTGTACTTATGCTTAAGTCTATAATACAGTCCACACAAAA CCATGACTGCGTACACCTACACTTGATGACTCAGAATACTCAAACCCACA TTGCAGAATGTGGTCGACGTAGCAACGCAAGGAAGATGACTACTTAGTGG CTAGTAGCACCCTTGCGAAATGCAGCCTGGCCGGCGAAAATCTGGCAGTC CTGGTCGAGACACAGCCATACAAAACATGAGTATACCCTCCCCCTCACTC CCCCCCCCCCCCCACACACACACCCTTCTACCTACCCAACCCGCCGTCGT CCCTCTCGCATCGATCCTGAAACGGTCATGTATGTAGGTGTTGGAGCTGT GTCGGCAAAATAAAGGGTCTGTGTACTGCCTGGATACCTCGGTGGACGCG TCTTTGGTGGCTAGCGGCGGAACGGACCGGATGATCCGACTGCTGGATCC CAGGGCCGGAGTCGGAAGGGCGGCCAAGGTGTGCAAACTTGATGGCCACC GGGACAACGTGCGCTGCGTGAGGATCGACGAAGGGGGCACCCGTGTGGTG AGCTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig10634:5305..8310+

>mRNA_H-paniculata_contig10634.414.1 ID=mRNA_H-paniculata_contig10634.414.1|Name=mRNA_H-paniculata_contig10634.414.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1980bp|location=Sequence derived from alignment at H-paniculata_contig10634:5305..8310+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCAGAAGCAGGAGCAGGAACAGAAAGATCCCACATTTTTTTCGACGGCTT
GGACAATAAACGAGTCCATCCTCTTCATCAACCGCCGTTATGTACATGCA
CCGGAATCCTGGCGTCTCACACGGACTGGGTCACCGGGCTCGCAGCCGCG
GAGGGTCGCATTCTGGCATCGTCGTCTAACGACGGGACGCTCAAGCTCTG
GGATCTCGCTGCGACGGCGGAGCAGACCGGAGATGACACCAGTGATGCGG
AAGATATGGGGATAGTTGGGGACAGGGAAAGGCACGAAGCACACGCAGGC
GATAGGGGGGGGGTTGCGAACGGAAGAGATGGCACGCGGATGGGGGGGGC
ACTGGAGAATGGAGGTGCGCGCGGACGGGCTAGGCAGAAGCAGGAGCAGG
AACAGAAAGATCCCACATTTTTTTCGACGGCTTGGACAATAAACGAGTCC
ATCCTCTTCATCAACCGCCGTTATGTACATGCACCGGAATCCTGGCGTCT
CACACGGACTGGGTCACCGGGCTCGCAGCCGCGGAGGGTCGCATTCTGGC
ATCGTCGTCTAACGACGGGACGCTCAAGCTCTGGGATCTCGCTGCGACGG
CGGAGCAGACCGGAGATGACACCAGTGATGCGGAAGATATGGGGATAGTT
GGGGACAGGGAAAGGCACGAAGCACACGCAGGCGATAGGGGGGGGGTTGC
GAACGGAAGAGATGGCACGCGGATGGGGGGGGCACTGGAGAATGGAGGTG
CGCGCGGACGGGCTAGCACCTCGCGGCGACGAAACACGTCATCAAGTCGC
GGTCCTCTTCTGCCCCGCCCGAAGCCCCTGGCAACAGTTGCCGGACATGG
CGACTACGTCAAGTGCCTGACATACGCCCCCGAGGGGGGGGTGCTTGTTT
CGGGCGGGTTGGACAAACGTATTCTCTTGTGGGATTTGCAGAGAATGACT
GCCCCCCTGATGACCCTTCGCATAGACCAGGAAGACGACGGTGGAGGTGC
CAGGGCGATGGATGTAGTGGAGGGTGTCGGCGGCGGCGGCGGCGGCGGGA
GGGGGGAGAGAGAGGGCTACGAAGAAAACGCGGCGTGGCTTCACTTGAGG
GATCCCTCGAAAGTGGTTATGAGGCCGGGGGTAGCGGCCGCTGGACCCAA
CGAGCACCTCGCGGCGACGAAACACGTCATCAAGTCGCGGTCCTCTTCTG
CCCCGCCCGAAGCCCCTGGCAACAGTTGCCGGACATGGCGACTACGTCAA
GTGCCTGACATACGCCCCCGAGGGGGGGGTGCTTGTTTCGGGCGGGTTGG
ACAAACGTATTCTCTTGTGGGATTTGCAGAGAATGACTGCCCCCCTGATG
ACCCTTCGCATAGACCAGGAAGACGACGGTGGAGGTGCCAGGGCGATGGA
TGTAGTGGAGGGTGTCGGCGGCGGCGGCGGCGGCGGGAGGGGGGAGAGAG
AGGGCTACGAAGAAAACGCGGCGTGGCTTCACTTGAGGGATCCCTCGAAA
GTGGTTATGAGGCCGGGGGTAGCGGCCGCTGGACCCAACGAGGTGTTGGA
GCTGTGTCGGCAAAATAAAGGGTCTGTGTACTGCCTGGATACCTCGGTGG
ACGCGTCTTTGGTGGCTAGCGGCGGAACGGACCGGATGATCCGACTGCTG
GATCCCAGGGCCGGAGTCGGAAGGGCGGCCAAGGTGTGCAAACTTGATGG
CCACCGGGACAACGTGCGCTGCGTGAGGATCGACGAAGGGGGCACCCGTG
TGGTGAGCTGAGTGTTGGAGCTGTGTCGGCAAAATAAAGGGTCTGTGTAC
TGCCTGGATACCTCGGTGGACGCGTCTTTGGTGGCTAGCGGCGGAACGGA
CCGGATGATCCGACTGCTGGATCCCAGGGCCGGAGTCGGAAGGGCGGCCA
AGGTGTGCAAACTTGATGGCCACCGGGACAACGTGCGCTGCGTGAGGATC
GACGAAGGGGGCACCCGTGTGGTGAGCTGA
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