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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-20_000930.1 |
| Exons | 5 |
| Model size | 315 |
| Cds size | 312 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10633.413.1 >prot_H-paniculata_contig10633.413.1 ID=prot_H-paniculata_contig10633.413.1|Name=mRNA_H-paniculata_contig10633.413.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=104bp
LSVRLEGERARCVKARREVAVLSRELLACRQQRDLASPAGVTLPTENVRE
NGTNETNQRSTSGRGSGFGDEERLRQQVVLLRNKLHTAQEELNKSHRILM
KEVG back to topmRNA from alignment at H-paniculata_contig10633:2836..5442- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig10633.413.1 ID=mRNA_H-paniculata_contig10633.413.1|Name=mRNA_H-paniculata_contig10633.413.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2607bp|location=Sequence derived from alignment at H-paniculata_contig10633:2836..5442- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGTCGGTGAGGCTGGAAGGAGAAAGGGCACGGTGAGTAGTTGACAATGT
CGTTGTCGGTACAGGGATGCGCTGTCGTGTGGGATGGTGATCGATCGCGG
AGCACAATTTGCCGTTGATCGATTCTTCCGATGGTCAATCAATGGCTCGT
CTACAGCAACAAAATCATCGATGGACGCACATCTTCTTCTCGGCCAACAT
TTACCATGCTCTTATGGTCGCCACGTAGGGAAGATATGCCGTTGCTCGAC
ATACGGTACACGTGACCAAGGACTTACCAATTCTATGTAGGAGGTGGAGA
CCCTGTGGACCTGGGGAGGGTGCCAGTTTCACAAAAATAGTGGTAGGCTA
CGTATACAGTGGTACTCGATCCCTGGTAGTGTGGCGTGTGGGATTCCAGA
AGGAAAAAAACAACAACAGAAGCTTCCGCACGATTTGGCAGCGTCACGAG
ACAAGTTCCGGCTGGAGTCGGCCTGCCCTAGATTTGATCAATCAGAACTC
GAAGAGACCAGATATCCAACCAGTTGGACAAGAGGAAGCTCGGCCTCAAA
AGCAACGGTACCGCGTCCTTACGAAGTAAAAAAATGTGGTGACACTATTT
GAGTCACTCTTCTAAAAGTTACTGTGCATGATATGATTTCTAAAGAAGAT
ACTATCAATAGCAGTCGGTCGACCTCAAAAAGTGAATAATTAAAAAGTTA
AGCCTAACCCCAAGTAGTGTCTATTGCAGGTTATCAAAATTACCTATTGT
CGCTCTCGCCCACCTACTCTTCTTTTTCTATGCGTACCTGCTGTACGTAT
TTGATCTTAACCACTTCAATGTTATTTCCAACTCATCGCTCTCTACTGAT
CCCGCGCGGACGACATATTGCAAAAAGATGCGTCAAAGCGCGGCGAGAGG
TGGCTGTCCTGAGCAGGGAATTGCTGGCATGCCGTCAACAACGTGACCTT
GCATCACCGGCCGGGGTAACATTGCCCACCGAGAACGTGCGTGAAAATGT
GAGTAAGACCGTGTTGAATAACTGCTAGTATTTTATCGTTTGTCGATTTG
ACGCAGTCTCGGGAAGATCAGCCTGTCAAGATGAATCTAGCCAAAGCCCA
ATTACTTCTAACACCGCCGCGTTTATTCATACGCTACCCCGTGAGGTGTA
CGAGCGGAATCCTGTCCAACGTATCTTGTACCTTGTACGGTGAAACATGG
TGTCCTTGGTGCTCTGCCTAAGTGTGCGGCACAGCAAAATTTCAGTGGAA
ATATGGCGCTGGCCTATCTTGCGGCGCCTACCGATTATCACCTTCACCAT
TGCTCGTAAAAAAACGCCCTCTCAAACCGAGCGGGACTTCGTAGAGCTGC
AACTGTCCGTCATCATGACTCGCTCTAAGCCGATGGCAGGACAAGGATCG
GATGGTGAGGGTTCAGGCTTCCATGAGAGATGTAGGCTCATTCAATGCGT
GCATCGCTTGTTGCCTGTCGTTTTCGAGAGCAACATCTCTGAAATGATCG
TATGAGTCCACTTCTATTCCCGGACATGCTTTTATAGGTCGATTGAACGC
AATATTCATCTCCTTGTTCTATCATATATTTGGTGCAGGGAACGAACGAG
ACAAATCAGCGATCTACTTCTGGTAGAGGCTCGGGCTTTGGTGACGAAGA
ACGCTTGCGTCAACAGGTGATTCGCATACATATCTACGCTTTAATTTGCC
TGTAAGATGTATGTCTTTTTACCGTGCAGGATACTATTACCTTGTGATAG
TCCCCAATTTAGCCCGGAAGAGGATGCCGCTCGTTGCCAAGCCGTGGATG
CATCAATGTATCCCATTTTTCGCGGTTCAACCTACCCAAACAGATGGCTC
TGTAAGATGTCATAACACTTAGGCAATAGACATATAATATTGGCCTGGGA
ATAGATACCTTGTCGAAAGGAGGCTCCTACACAAGATCATATTATGAATG
AAGTAGTACCAGTTTTCCGCGGCATGCGAGCGGTGTTTTCGCAACAGATA
CGGGGCCAGAACGCGATACCTAACTCGTCCTGACTCAGTATCGCTGTATC
GCCTAGTGTCCCACAAATAGAAGCGGCATTATGTGGTGCATTCGCTTCTC
ATGGTCATGTTCGTAGTATTGCCGTTCATTTTCTTTTTGGGGTTCAGGTG
GTACTGCTACGAAACAAGCTGCACACTGCTCAGGAGGAACTCAACAAATC
TCACAGGTGAACGAGGGTTTCGCTTCCTTCTGAAACAGCATATTCATCGT
GAGACCCCCCGAAAAAAACGAACACTGAATTGATGCTAGCCTCCCGGCCT
AATGACTGTAATTTTCTTGTTTTACCAAAACGAGCTATTCATTGTTGTGC
ATTTATTTCACCGTTGTCACACTCGGGGGTGGGTAAGCCCAGTGTACGTG
TCATGATCCACAGGCTGTAAGCACCCATTTGACTCGATGCGCATCCGAGT
GAAAACAAGCAAGTCATGTGTTGTTCTCTAGCGAAACCATTTTTTTACTA
ATATACGTAGGTGAGAAAAAATAAAGAAGAGGTTTCTGGTATGGACATGG
GAAAAAAAACTGGATTTCACTTGGCTGACGCAGGATATTGATGAAAGAGG
TAGGGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig10633:2836..5442- >mRNA_H-paniculata_contig10633.413.1 ID=mRNA_H-paniculata_contig10633.413.1|Name=mRNA_H-paniculata_contig10633.413.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=624bp|location=Sequence derived from alignment at H-paniculata_contig10633:2836..5442- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGTCGGTGAGGCTGGAAGGAGAAAGGGCACGCTGTCGGTGAGGCTGGAA
GGAGAAAGGGCACGATGCGTCAAAGCGCGGCGAGAGGTGGCTGTCCTGAG
CAGGGAATTGCTGGCATGCCGTCAACAACGTGACCTTGCATCACCGGCCG
GGGTAACATTGCCCACCGAGAACGTGCGTGAAAATATGCGTCAAAGCGCG
GCGAGAGGTGGCTGTCCTGAGCAGGGAATTGCTGGCATGCCGTCAACAAC
GTGACCTTGCATCACCGGCCGGGGTAACATTGCCCACCGAGAACGTGCGT
GAAAATGGAACGAACGAGACAAATCAGCGATCTACTTCTGGTAGAGGCTC
GGGCTTTGGTGACGAAGAACGCTTGCGTCAACAGGGAACGAACGAGACAA
ATCAGCGATCTACTTCTGGTAGAGGCTCGGGCTTTGGTGACGAAGAACGC
TTGCGTCAACAGGTGGTACTGCTACGAAACAAGCTGCACACTGCTCAGGA
GGAACTCAACAAATCTCACAGGTGGTACTGCTACGAAACAAGCTGCACAC
TGCTCAGGAGGAACTCAACAAATCTCACAGGATATTGATGAAAGAGGTAG
GGGATATTGATGAAAGAGGTAGGG back to top
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