mRNA_H-paniculata_contig10631.411.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig10631.411.1 vs. uniprot
Match: D7FUH1_ECTSI (Putative methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH1_ECTSI) HSP 1 Score: 216 bits (549), Expect = 3.450e-62 Identity = 102/144 (70.83%), Postives = 121/144 (84.03%), Query Frame = 1 Query: 7 PQVHVLPRTSAGKEFHELLASADVILHPFPFGGSKTAADGLSLGLPVVTMAGDMLPGRMAYSLYKSMGLDRGGNNGCCVVADRDSYVALAVRLGKDEQYRRWAGKLIDERSHVLWERQEVVNEWAKFLARAARRLLPTAGEVSV 438 PQV +LPR SAGKEF LASADVILHPFPFGGSKTAADGL+LG+PVV M GD LPGRMA+SLYK+MGL+R G+ GCC+ RDSYV LAVRLG+D +YRRWAG LI +RS LWER++V+ EWA+FL+RAA R+ PTA EV++ Sbjct: 682 PQVKILPRMSAGKEFRTFLASADVILHPFPFGGSKTAADGLALGVPVVAMEGDALPGRMAFSLYKTMGLERPGDGGCCIAKSRDSYVELAVRLGRDAEYRRWAGNLIGQRSSALWERRDVLLEWARFLSRAAGRISPTAEEVNL 825
BLAST of mRNA_H-paniculata_contig10631.411.1 vs. uniprot
Match: A0A3R7Y9X5_9STRA (Glyco_transf_41 domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7Y9X5_9STRA) HSP 1 Score: 128 bits (321), Expect = 8.390e-34 Identity = 68/133 (51.13%), Postives = 82/133 (61.65%), Query Frame = 1 Query: 10 QVHVLPRTSAGKEFHELLASADVILHPFPFGGSKTAADGLSLGLPVVTMAGDMLPGRMAYSLYKSMG-LDRGGNNGCCVVADRDSYVALAVRLGKDEQYRRWAGKLIDERSHVLWERQEVVNEWAKFLARAAR 405 +VH PR F +LL+ ADV+LHPFPFGGSKT+AD L LGLP+V M +L RMAYS Y M LD CV + D Y+A+A+RLG D YR + I ER H+LWE EVV EW +FL A R Sbjct: 133 RVHFRPRVGGSDAFLKLLSVADVVLHPFPFGGSKTSADALLLGLPLVAMKTPLLRSRMAYSFYLHMDMLD-------CVASTEDEYIAIALRLGTDAVYRSDTARRIRERQHLLWENDEVVAEWERFLYNAVR 258
BLAST of mRNA_H-paniculata_contig10631.411.1 vs. uniprot
Match: W4H2F0_9STRA (Glyco_transf_41 domain-containing protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H2F0_9STRA) HSP 1 Score: 128 bits (321), Expect = 1.590e-31 Identity = 68/133 (51.13%), Postives = 82/133 (61.65%), Query Frame = 1 Query: 10 QVHVLPRTSAGKEFHELLASADVILHPFPFGGSKTAADGLSLGLPVVTMAGDMLPGRMAYSLYKSMG-LDRGGNNGCCVVADRDSYVALAVRLGKDEQYRRWAGKLIDERSHVLWERQEVVNEWAKFLARAAR 405 +VH PR F +LL+ ADV+LHPFPFGGSKT+AD L LGLP+V M +L RMAYS Y M LD CV + D Y+A+A+RLG D YR + I ER H+LWE EVV EW +FL A R Sbjct: 673 RVHFRPRVGGSDAFLKLLSVADVVLHPFPFGGSKTSADALLLGLPLVAMKTPLLRSRMAYSFYLHMDMLD-------CVASTEDEYIAIALRLGTDAVYRSDTARRIRERQHLLWENDEVVAEWERFLYNAVR 798
BLAST of mRNA_H-paniculata_contig10631.411.1 vs. uniprot
Match: A0A397DKH7_9STRA (Glyco_transf_41 domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DKH7_9STRA) HSP 1 Score: 127 bits (318), Expect = 2.910e-31 Identity = 68/133 (51.13%), Postives = 81/133 (60.90%), Query Frame = 1 Query: 10 QVHVLPRTSAGKEFHELLASADVILHPFPFGGSKTAADGLSLGLPVVTMAGDMLPGRMAYSLYKSMG-LDRGGNNGCCVVADRDSYVALAVRLGKDEQYRRWAGKLIDERSHVLWERQEVVNEWAKFLARAAR 405 +VH PR F +LL+ ADV+LHPFPFGGSKT+AD L LGLP+V M L RMAYS Y M LD CV + D Y+A+A+RLG D YR + I ER H+LWE EVV EW +FL A R Sbjct: 494 RVHFRPRVGGSDAFLKLLSVADVVLHPFPFGGSKTSADALLLGLPLVAMKTPFLRSRMAYSFYLHMDMLD-------CVASTEDEYIAIALRLGTDAVYRSDIARRIRERQHLLWENDEVVAEWERFLYNAVR 619
BLAST of mRNA_H-paniculata_contig10631.411.1 vs. uniprot
Match: A0A835YUZ8_9STRA (Glyco_transf_41 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUZ8_9STRA) HSP 1 Score: 126 bits (317), Expect = 5.860e-31 Identity = 65/134 (48.51%), Postives = 87/134 (64.93%), Query Frame = 1 Query: 10 QVHVLPRTSAGKEFHELLASADVILHPFPFGGSKTAADGLSLGLPVVTMAGDMLPGRMAYSLYKSMGLDRGGNNGCCVVADR--DSYVALAVRLGKDEQYRRWAGKLIDERSHVLWERQEVVNEWAKFLARAAR 405 +VH++ RT++G ++ L+A ADV+LHPFPFGGS+T+ DG +G PVVTMA D L GRMA + Y +MGLD V R Y+ LA +LG+D+ YR I H++WERQ+VV+EW FL RA R Sbjct: 717 RVHLVTRTNSGSDYLRLIAGADVLLHPFPFGGSRTSTDGFQVGTPVVTMATDQLRGRMAAAFYTTMGLDTEMVCPYDTVHKRHIQCYLDLATKLGQDQSYRAAMTHRIRRNIHLIWERQDVVDEWTSFLRRAHR 850
BLAST of mRNA_H-paniculata_contig10631.411.1 vs. uniprot
Match: A0A024UQX4_9STRA (Protein O-GlcNAc transferase n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UQX4_9STRA) HSP 1 Score: 124 bits (311), Expect = 3.550e-30 Identity = 64/134 (47.76%), Postives = 83/134 (61.94%), Query Frame = 1 Query: 10 QVHVLPRTSAGKEFHELLASADVILHPFPFGGSKTAADGLSLGLPVVTMAGDMLPGRMAYSLYKSMGLDRGGNNGCCVVADRDSYVALAVRLGKDEQYRRWAGKLIDERSHVLWERQEVVNEWAKFLARAARRL 411 +VH LPR F +LL+ ADV+LHPFPFGGSKT+AD L LGLP+V M L RMAYS YK MGL V + YVA+A++LG D +R + I ++ H++WE +EVV EW +FL + R L Sbjct: 673 RVHFLPRVGGSAPFLKLLSVADVVLHPFPFGGSKTSADALLLGLPLVAMKTPFLRCRMAYSFYKHMGLLE------LVATTVEEYVAIALKLGTDAAHRNEMARRIQQKQHLIWENREVVAEWERFLYNSVRSL 800
BLAST of mRNA_H-paniculata_contig10631.411.1 vs. uniprot
Match: A0A6S8RMR4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8RMR4_9STRA) HSP 1 Score: 123 bits (309), Expect = 6.870e-30 Identity = 62/127 (48.82%), Postives = 83/127 (65.35%), Query Frame = 1 Query: 22 LPRTSAGKEFHELLASADVILHPFPFGGSKTAADGLSLGLPVVTMAGDMLPGRMAYSLYKSMGLDRGGNNGCCVVADRDSYVALAVRLGKDEQYRRWAGKLIDERSHVLWERQEVVNEWAKFLARAA 402 +PR G ++++LLA ADV+LHPFPFGGS+T+ADGL+LG+PVV L RMAYS Y SMGL + N V + + YV+ A RL D ++RR + R HV+WE + VV WA+FLAR + Sbjct: 755 VPRQMPGADYYKLLAVADVLLHPFPFGGSRTSADGLALGVPVVVRPTTQLRCRMAYSFYASMGLTQ--KNWTLVASTTNDYVSFAARLANDVEHRRTVAAAVAARQHVIWEDRSVVLGWARFLARVS 879
BLAST of mRNA_H-paniculata_contig10631.411.1 vs. uniprot
Match: A0A7S3ZLD0_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZLD0_9STRA) HSP 1 Score: 123 bits (309), Expect = 7.010e-30 Identity = 62/127 (48.82%), Postives = 83/127 (65.35%), Query Frame = 1 Query: 22 LPRTSAGKEFHELLASADVILHPFPFGGSKTAADGLSLGLPVVTMAGDMLPGRMAYSLYKSMGLDRGGNNGCCVVADRDSYVALAVRLGKDEQYRRWAGKLIDERSHVLWERQEVVNEWAKFLARAA 402 +PR G ++++LLA ADV+LHPFPFGGS+T+ADGL+LG+PVV L RMAYS Y SMGL + N V + + YV+ A RL D ++RR + R HV+WE + VV WA+FLAR + Sbjct: 755 VPRQMPGADYYKLLAVADVLLHPFPFGGSRTSADGLALGVPVVVRPTTQLRCRMAYSFYASMGLTQ--KNWTLVASTTNDYVSFAARLANDVEHRRTVAAAVAARQHVIWEDRSVVLGWARFLARVS 879
BLAST of mRNA_H-paniculata_contig10631.411.1 vs. uniprot
Match: A0A1W0AC99_9STRA (TPR repeat-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AC99_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.270e-27 Identity = 56/134 (41.79%), Postives = 84/134 (62.69%), Query Frame = 1 Query: 10 QVHVLPRTSAGKEFHELLASADVILHPFPFGGSKTAADGLSLGLPVVTMAGDMLPGRMAYSLYKSMGLDRGGNNGCCVVADRDSYVALAVRLGKDEQYRRWAGKLIDERSHVLWERQEVVNEWAKFLARAARRL 411 ++H LPR + + + LL+ A ++LHPFPFGGSKT+A+ L+LG+PVV M L RMA + Y MG+ C+ + ++ Y+ LA+RLG ++ YR I R+ +LW+ Q+VV+EW +FL A R L Sbjct: 623 RIHFLPRVAGHEPYMRLLSMATIVLHPFPFGGSKTSAEALALGIPVVVMQTPYLRCRMAAAYYIHMGMSD------CIASTQEDYINLAIRLGTNQTYRAMISSKIQARAPMLWQNQQVVDEWERFLINAVRLL 750
BLAST of mRNA_H-paniculata_contig10631.411.1 vs. uniprot
Match: A0A7S3K5W7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K5W7_9STRA) HSP 1 Score: 117 bits (292), Expect = 1.360e-27 Identity = 65/138 (47.10%), Postives = 83/138 (60.14%), Query Frame = 1 Query: 22 LPRTSAGKEFHELLASADVILHPFPFGGSKTAADGLSLGLPVVTMAGDMLPGRMAYSLYKSMGLDRGGNNGCCVVADR-DSYVALAVRLGKDEQYRRWAGKLIDERSHVLWERQEVVNEWAKFLARAARRLLPTAGEV 432 LPR G F L+A ADV+LHPFPFGGS+T++DGL++G+PVVT L GRMA S Y +M + N C+VA+ + YV RL D ++R I ERS +WE + V EWA+ LAR A R PT EV Sbjct: 713 LPRQPPGSAFMRLVALADVMLHPFPFGGSRTSSDGLAVGVPVVTRPTTNLRGRMAASFYLTMEMT---NPEWCLVAENSEQYVQFVARLANDHEHRARVAAAIRERSPRIWEHHQYVYEWARLLARVAGRPAPTPEEV 847 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10631.411.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10631.411.1 >prot_H-paniculata_contig10631.411.1 ID=prot_H-paniculata_contig10631.411.1|Name=mRNA_H-paniculata_contig10631.411.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=146bp VPPQVHVLPRTSAGKEFHELLASADVILHPFPFGGSKTAADGLSLGLPVVback to top mRNA from alignment at H-paniculata_contig10631:1662..3661+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10631.411.1 ID=mRNA_H-paniculata_contig10631.411.1|Name=mRNA_H-paniculata_contig10631.411.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2000bp|location=Sequence derived from alignment at H-paniculata_contig10631:1662..3661+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10631:1662..3661+ >mRNA_H-paniculata_contig10631.411.1 ID=mRNA_H-paniculata_contig10631.411.1|Name=mRNA_H-paniculata_contig10631.411.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=876bp|location=Sequence derived from alignment at H-paniculata_contig10631:1662..3661+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |