mRNA_H-paniculata_contig10627.406.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig10627.406.1 vs. uniprot
Match: D7FX38_ECTSI (Similar to Probable phospholipid-transporting ATPase ID (ATPase class I type 8B member 2) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX38_ECTSI) HSP 1 Score: 234 bits (598), Expect = 9.490e-70 Identity = 122/191 (63.87%), Postives = 147/191 (76.96%), Query Frame = 1 Query: 10 KYTALNFVFKNLWKQFHRPANVYFLSISILQCIEAISITGGTSTTLVPLTAVILATAVKDGFEDYHRHKADAVENYRMCTQIVLGDGKRDK---RKSSLSQCTKPRASGAVAVCGLE----AGSETISWLEVQVGDVLEVRNRETIPADLVLLSCSDPQGTCFVMTSNLDGETNLKSRVVSPDLRAATAAA 561 +YTALNFVFKNLW+QFHRPANVYFL ISILQCI+ ISITGGT TTL PLTAV++AT+ KDG ED+ RH+ADA EN R T++V+ +R+ K K R + ++ G + A +E + W++VQVGDVLE+RNRE IPADLV+LSCSDP+GTCFV+TSNLDGETNLK RVVSPDLRA AAA Sbjct: 17 EYTALNFVFKNLWEQFHRPANVYFLGISILQCIKPISITGGTPTTLAPLTAVLIATSTKDGIEDFTRHQADAQENSRTVTRLVVPGQRRNSVAGGKGXXXXXXKERKNSGGSIRGSKPRPPAATEEVPWMDVQVGDVLEIRNRENIPADLVMLSCSDPKGTCFVLTSNLDGETNLKPRVVSPDLRAVIAAA 207
BLAST of mRNA_H-paniculata_contig10627.406.1 vs. uniprot
Match: A0A6H5J7R3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7R3_9PHAE) HSP 1 Score: 213 bits (542), Expect = 1.250e-60 Identity = 115/193 (59.59%), Postives = 135/193 (69.95%), Query Frame = 1 Query: 10 KYTALNFVFKNLWKQFHRPANVYFLSISILQCIEAISITGGTSTTLVPLTAVILATAVKDGFEDYHRHKADAVENYRMCTQIVLGDGKRDKRKSSLSQ-----CTKPRASGAVAVCGLE----AGSETISWLEVQVGDVLEVRNRETIPADLVLLSCSDPQGTCFVMTSNLDGETNLKSRVVSPDLRAATAAA 561 KYTALNFVFKNLW+QFHRPANVYFL ISILQCI+ ISITGG + AT+ KDG ED+ RH+ADA EN R T++V+ +R C K R + ++ G + A +E + W+ VQVGDVLE+RNRE IPADLV+LSCSDP+GTCFVMTSNLDGETNLK RVVSPDLRA AAA Sbjct: 9 KYTALNFVFKNLWEQFHRPANVYFLGISILQCIKPISITGGHPKLTRTNVTMTQATSTKDGIEDFTRHQADAQENSRTVTRLVVPGQRRSSXXXXXXXXXXXXCGKERKNSGGSIRGSKPRPPAATEEVPWMNVQVGDVLEIRNRENIPADLVMLSCSDPKGTCFVMTSNLDGETNLKPRVVSPDLRAVIAAA 201
BLAST of mRNA_H-paniculata_contig10627.406.1 vs. uniprot
Match: A0A7S2WGS7_9STRA (Phospholipid-transporting ATPase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGS7_9STRA) HSP 1 Score: 154 bits (390), Expect = 3.960e-40 Identity = 91/180 (50.56%), Postives = 110/180 (61.11%), Query Frame = 1 Query: 13 YTALNFVFKNLWKQFHRPANVYFLSISILQCIEAISITGGTSTTLVPLTAVILATAVKDGFEDYHRHKADAVENYRMCTQIVLGDGKRDKRKSSLSQCTKPRASGAVAVCGLEAGSETISWLEVQVGDVLEVRNRETIPADLVLLSCSDPQGTCFVMTSNLDGETNLKSRVVSPDLRAAT 552 YT NF+ NLWKQF R NVYFL ISILQ I+ ISIT G T L L ++L TAVKDG ED+HRH+AD EN R C ++ KS ++ T SW +V+VGDV+E+RNRE IPAD+VLL SD G CFVMT+NLDGETNLK R VS ++ +T Sbjct: 63 YTWWNFIPLNLWKQFQRRQNVYFLFISILQTIDKISITLGVPTVLPILLLLLLITAVKDGIEDFHRHQADREENGR-CAHVI-------NLKSDIAADT--------------------SWRDVKVGDVIEIRNRELIPADVVLLQSSDENGLCFVMTANLDGETNLKLRKVSANMHGST 214
BLAST of mRNA_H-paniculata_contig10627.406.1 vs. uniprot
Match: A0A086LBM0_TOXGO (Phospholipid-translocating P-type ATPase, flippase subfamily protein n=1 Tax=Toxoplasma gondii FOU TaxID=943167 RepID=A0A086LBM0_TOXGO) HSP 1 Score: 132 bits (331), Expect = 1.130e-33 Identity = 79/195 (40.51%), Postives = 103/195 (52.82%), Query Frame = 1 Query: 10 KYTALNFVFKNLWKQFHRPANVYFLSISILQCIEAISITGGTSTTLVPLTAVILATAVKDGFEDYHRHKADAVENY-----------RMCTQIVLGDGK-------RDKRKSSLS--------QCTKPRASGAVAVCGLEAGSETISWLEVQVGDVLEVRNRETIPADLVLLSCSDPQGTCFVMTSNLDGETNLK 516 KYT NFV KNLW+QFH+ +NVYF+ I LQ I IS T G T +PL+ V++ A KD FED+ RH++D +EN R + L D K R R S LS +C G + + G W +VQVGDV+ + PAD+VLL+ SD +G FV T++LDGETNLK Sbjct: 35 KYTVWNFVVKNLWEQFHKVSNVYFVVICCLQMIPQISTTNGVPTLALPLSIVLVVNAAKDAFEDWQRHRSDRIENGQVTHCIAMAPDRAACSLRLRDAKDVAVEVRRTSRSSGLSAEDLVATAECAAAAQLGLTSAQARDLGITPKQWKDVQVGDVILCLKNDCFPADMVLLATSDTRGGAFVETASLDGETNLK 229
BLAST of mRNA_H-paniculata_contig10627.406.1 vs. uniprot
Match: A0A397AJS6_9STRA (PhoLip_ATPase_N domain-containing protein (Fragment) n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AJS6_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.340e-33 Identity = 74/180 (41.11%), Postives = 102/180 (56.67%), Query Frame = 1 Query: 13 YTALNFVFKNLWKQFHRPANVYFLSISILQCIEAISITGGTSTTLVPLTAVILATAVKDGFEDYHRHKADAVENYRMCTQIVLGDGKRDKRKSSLSQCTKPRASGAVAVCGLEAGSETISWLEVQVGDVLEVRNRETIPADLVLLSCSDPQGTCFVMTSNLDGETNLK-----SRVVSPD 537 YT NF+FKNL+KQF R +N+YFL I++LQ I ++++GG TT+VPL V+ A+KD ED HRH AD V+N Q+ GD K +W ++ VG +++V E IPAD+++L+ S P G CF MT+NLDGETNLK S++ SPD Sbjct: 62 YTPYNFLFKNLFKQFARLSNMYFLFITVLQVIPQVTLSGGYPTTIVPLVFVLFVNAIKDLIEDIHRHNADTVQNSSKTLQMQDGDAK--------------------------PAFVATTWADLHVGSIVKVHQNEIIPADMIILASSSPIGQCFTMTANLDGETNLKIRWVPSQLASPD 215
BLAST of mRNA_H-paniculata_contig10627.406.1 vs. uniprot
Match: A0A4D9DI51_9STRA (Phospholipid-transporting ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DI51_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.500e-33 Identity = 78/162 (48.15%), Postives = 102/162 (62.96%), Query Frame = 1 Query: 58 HRPANVYFLSISILQCIEAISITGGTSTTLVPLTAVILATAVKDGFEDYHRHKADAVENYRMCTQIVLGDGKRDKRKSSLSQCTKPRASGAVAVCGLEAGSETISWLEVQVGDVLEVRNRETIPADLVLLSCSDPQGTCFVMTSNLDGETNLKSRVVSPDLR 543 HR ANVYFL ISILQ I+A+SIT G TT +PL+ V+ TAVKD ED++RH+ADAVEN R T +L +R L PR W +++VGDV+ ++NR+ IPAD++LLS ++P G FVMT+NLDGETNLK++ V D R Sbjct: 2 HRAANVYFLFISILQTIKAVSITSGVPTTALPLSFVLFVTAVKDAIEDFNRHRADAVENNR--TSYLL----TQERGWDLHHA-HPR-----------------KWQDIKVGDVVVIKNRDPIPADIILLSSAEPSGLAFVMTANLDGETNLKAKEVHKDFR 139
BLAST of mRNA_H-paniculata_contig10627.406.1 vs. uniprot
Match: W4FF65_9STRA (Phospholipid-transporting ATPase n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FF65_9STRA) HSP 1 Score: 135 bits (341), Expect = 1.500e-33 Identity = 74/180 (41.11%), Postives = 102/180 (56.67%), Query Frame = 1 Query: 13 YTALNFVFKNLWKQFHRPANVYFLSISILQCIEAISITGGTSTTLVPLTAVILATAVKDGFEDYHRHKADAVENYRMCTQIVLGDGKRDKRKSSLSQCTKPRASGAVAVCGLEAGSETISWLEVQVGDVLEVRNRETIPADLVLLSCSDPQGTCFVMTSNLDGETNLK-----SRVVSPD 537 YT NF+FKNL+KQF R +N+YFL I++LQ I ++++GG TT+VPL V+ A+KD ED HRH AD V+N Q+ GD K +W ++ VG +++V E IPAD+++L+ S P G CF MT+NLDGETNLK S++ SPD Sbjct: 62 YTPYNFLFKNLFKQFARLSNMYFLFITVLQVIPQVTLSGGYPTTIVPLVFVLFVNAIKDLIEDIHRHNADTVQNSSKTLQMQDGDAK--------------------------PAFVATTWADLHVGSIVKVHQNEIIPADMIILASSSPIGQCFTMTANLDGETNLKIRWVPSQLASPD 215
BLAST of mRNA_H-paniculata_contig10627.406.1 vs. uniprot
Match: A0A485KW91_9STRA (Phospholipid-transporting ATPase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KW91_9STRA) HSP 1 Score: 134 bits (337), Expect = 5.180e-33 Identity = 75/173 (43.35%), Postives = 105/173 (60.69%), Query Frame = 1 Query: 13 YTALNFVFKNLWKQFHRPANVYFLSISILQCIEAISITGGTSTTLVPLTAVILATAVKDGFEDYHRHKADAVENYRMCTQI-VLGDGKRDKRKSSLSQCTKPRASGAVAVCGLEAGSETISWLEVQVGDVLEVRNRETIPADLVLLSCSDPQGTCFVMTSNLDGETNLKSRVV 528 YT NF+FKNL+KQF R +N+YFL I++LQ I ++++GG TT+VPL V++ A+KD ED HRH AD V+N +I VLGD KP+ E +W +++VG +++V + IP+DL++L+ S P G CF MT+NLDGETNLK R V Sbjct: 75 YTPYNFLFKNLFKQFARLSNMYFLFITVLQVIPQVTLSGGYPTTIVPLLFVLVVNAIKDIIEDVHRHNADNVQNATKSLEIAVLGD--------------KPQF-------------EPTTWSDLRVGSIVKVLQNQVIPSDLIILASSSPIGQCFTMTANLDGETNLKIRWV 220
BLAST of mRNA_H-paniculata_contig10627.406.1 vs. uniprot
Match: T0QDY3_SAPDV (Phospholipid-transporting ATPase n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QDY3_SAPDV) HSP 1 Score: 133 bits (334), Expect = 1.310e-32 Identity = 71/177 (40.11%), Postives = 99/177 (55.93%), Query Frame = 1 Query: 13 YTALNFVFKNLWKQFHRPANVYFLSISILQCIEAISITGGTSTTLVPLTAVILATAVKDGFEDYHRHKADAVENYRMCTQIVLGDGKRDKRKSSLSQCTKPRASGAVAVCGLEAGSETISWLEVQVGDVLEVRNRETIPADLVLLSCSDPQGTCFVMTSNLDGETNLKSRVVSPDLR 543 YT NFV KNL+KQF R AN+YFL I+ILQ + ++++ G TT+VPL V++ A+KD ED HRH AD ++N M ++ + + E + W ++VG ++ V E IP+D++LL S P G CF MT+NLDGETNLK R V P+ R Sbjct: 56 YTPYNFVVKNLFKQFSRFANLYFLFITILQIVPQVTLSSGIPTTIVPLLFVLIINAIKDLIEDVHRHNADRIQNSSMTHELNV----------------------------VSMTFEAVKWEAIRVGSIVRVTQGEVIPSDMILLGTSSPIGQCFTMTANLDGETNLKIRWVPPEFR 204
BLAST of mRNA_H-paniculata_contig10627.406.1 vs. uniprot
Match: U6MJ79_9EIME (Phospholipid-translocating P-type ATPase, flippase family protein, expressed, related (Fragment) n=1 Tax=Eimeria necatrix TaxID=51315 RepID=U6MJ79_9EIME) HSP 1 Score: 126 bits (316), Expect = 1.690e-32 Identity = 72/189 (38.10%), Postives = 102/189 (53.97%), Query Frame = 1 Query: 10 KYTALNFVFKNLWKQFHRPANVYFLSISILQCIEAISITGGTSTTLVPLTAVILATAVKDGFEDYHRHKADAVENYRMCTQIVLGDGKRDKRKSSLSQCTKPRASGAVAVCG-----------LEAGSETISWLEVQVGDVLEVRNRETIPADLVLLSCSDPQGTCFVMTSNLDGETNLKSRVVSPDLR 543 KYT NFV KNLW+QF + +NVYF+ I LQCI AIS T GT T +PL V+ A KD +ED RH++D +EN+++ + D + +L + + L+ G W +V++GD+L E ADL+LL +DP+G F+ TS+LDGETNLK + P L+ Sbjct: 37 KYTLWNFVPKNLWEQFQKTSNVYFIVICALQCIPAISTTNGTPTLALPLAIVVTVNACKDAYEDIQRHQSDRLENHQVTYSLPRSAA--DSAEFALREARQXXXXXXXXXXXXXXXXXXXXXLLKLGLIARKWRDVKLGDLLVCFKNEAFAADLLLLGSADPRGLAFIETSSLDGETNLKLKQTLPSLK 223 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10627.406.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10627.406.1 >prot_H-paniculata_contig10627.406.1 ID=prot_H-paniculata_contig10627.406.1|Name=mRNA_H-paniculata_contig10627.406.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=187bp MVVKYTALNFVFKNLWKQFHRPANVYFLSISILQCIEAISITGGTSTTLVback to top mRNA from alignment at H-paniculata_contig10627:7341..8343+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10627.406.1 ID=mRNA_H-paniculata_contig10627.406.1|Name=mRNA_H-paniculata_contig10627.406.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1003bp|location=Sequence derived from alignment at H-paniculata_contig10627:7341..8343+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10627:7341..8343+ >mRNA_H-paniculata_contig10627.406.1 ID=mRNA_H-paniculata_contig10627.406.1|Name=mRNA_H-paniculata_contig10627.406.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1122bp|location=Sequence derived from alignment at H-paniculata_contig10627:7341..8343+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |