mRNA_H-paniculata_contig10607.395.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match: D7G288_ECTSI (D-lactate dehydrogenase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G288_ECTSI) HSP 1 Score: 159 bits (403), Expect = 2.350e-45 Identity = 76/90 (84.44%), Postives = 82/90 (91.11%), Query Frame = 1 Query: 1 ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMVHK 270
ELWR+RKEALWSL+GLYP+LEC+TTDVCVPVSRL+DLIG SK ELDAS LPAPIVAHAGDGNFHALIMFD+ NP V EA RLSSFMVHK
Sbjct: 276 ELWRQRKEALWSLMGLYPELECMTTDVCVPVSRLSDLIGQSKRELDASRLPAPIVAHAGDGNFHALIMFDRTNPADVAEADRLSSFMVHK 365
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match: A0A0K9R847_SPIOL (FAD-binding PCMH-type domain-containing protein (Fragment) n=5 Tax=Chenopodioideae TaxID=1307796 RepID=A0A0K9R847_SPIOL) HSP 1 Score: 119 bits (298), Expect = 1.040e-30 Identity = 55/88 (62.50%), Postives = 66/88 (75.00%), Query Frame = 1 Query: 1 ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMV 264
ELW+ RKEALW+ + P E +TTDVCVP+S+LA+LI SK LDASPL +VAHAGDGNFH LI+FD NN +H EA RL+ FMV
Sbjct: 180 ELWKMRKEALWACFAMEPSFEAMTTDVCVPLSQLAELISKSKEVLDASPLTCTVVAHAGDGNFHTLILFDPNNEEHRQEAERLNHFMV 267
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match: A0A540NII5_MALBA (FAD-oxidase_C domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540NII5_MALBA) HSP 1 Score: 114 bits (285), Expect = 1.310e-30 Identity = 51/89 (57.30%), Postives = 67/89 (75.28%), Query Frame = 1 Query: 1 ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMVH 267
ELW+ RKEALW+ + P+ E + +DVCVP+S LA+LI SK++LDAS L ++AHAGDGNFH +I+FD NN +H EA RL+ FMVH
Sbjct: 47 ELWKIRKEALWACFAMEPNFEAMISDVCVPLSCLAELISRSKVQLDASELVCTVIAHAGDGNFHTVILFDPNNEEHRREAERLNHFMVH 135
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match: UPI000B78B9A0 (D-lactate dehydrogenase [cytochrome], mitochondrial-like n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B78B9A0) HSP 1 Score: 116 bits (291), Expect = 1.820e-30 Identity = 53/89 (59.55%), Postives = 66/89 (74.16%), Query Frame = 1 Query: 1 ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMVH 267
ELW+ RKEALW+ + P+ E + +DVCVP+SRLA+LI SK ELDASPL ++AHAGDGNFH +I+FD N K EA RL+ FMVH
Sbjct: 93 ELWKIRKEALWACFAMEPNYEAMISDVCVPLSRLAELISKSKKELDASPLVCTVIAHAGDGNFHTVILFDPNQEKQRQEAERLNQFMVH 181
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match: S8EAM9_9LAMI (FAD-binding PCMH-type domain-containing protein n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8EAM9_9LAMI) HSP 1 Score: 121 bits (303), Expect = 3.240e-30 Identity = 55/89 (61.80%), Postives = 68/89 (76.40%), Query Frame = 1 Query: 1 ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMVH 267
ELW+ RKEALW+ L PD E + TDVCVP+SRLADL+ SK +LDASPL ++AHAGDGNFH +I+FD ++ K +EA RLS FMVH
Sbjct: 426 ELWKIRKEALWACFALKPDCEAMITDVCVPLSRLADLVSASKKQLDASPLVCTVIAHAGDGNFHTVILFDPSDVKQREEAERLSHFMVH 514
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match: UPI001CC3CF42 (D-lactate dehydrogenase [cytochrome], mitochondrial-like n=1 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC3CF42) HSP 1 Score: 120 bits (300), Expect = 8.230e-30 Identity = 56/89 (62.92%), Postives = 67/89 (75.28%), Query Frame = 1 Query: 1 ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMVH 267
ELW+ RKEALW+ + P E + +DVCVP+SRLA+LI SK ELDASPL +VAHAGDGNFH LI+FD NN +H EA RL+ FMVH
Sbjct: 421 ELWKIRKEALWACFAMEPGFEAMISDVCVPLSRLAELISRSKEELDASPLVCVVVAHAGDGNFHTLILFDPNNEEHKREAERLNHFMVH 509
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match: A0A6U4CM34_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CM34_9STRA) HSP 1 Score: 119 bits (298), Expect = 1.170e-29 Identity = 57/87 (65.52%), Postives = 62/87 (71.26%), Query Frame = 1 Query: 4 LWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMV 264
+WRERKEALW YP+ TDV PVSRLADLI V K ELDASPLPAPI AHAGDGNFH +IM D N + EA RLS+FMV
Sbjct: 360 IWRERKEALWHCFAAYPEKTAFITDVIAPVSRLADLISVCKPELDASPLPAPICAHAGDGNFHTVIMIDPGNEAELHEAERLSAFMV 446
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match: A0A4D9B6J5_SALSN (D-lactate dehydrogenase (Cytochrome) n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9B6J5_SALSN) HSP 1 Score: 114 bits (285), Expect = 3.140e-29 Identity = 52/89 (58.43%), Postives = 66/89 (74.16%), Query Frame = 1 Query: 1 ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMVH 267
ELW+ RKEALW+ + P+ E L TDVCVP+SRLA++I SK +LDASPL ++AHAGDGNFH +I+FD N + EA RL+ FMVH
Sbjct: 128 ELWKIRKEALWACFAMEPNSEALITDVCVPLSRLAEIISTSKKQLDASPLVCTVLAHAGDGNFHCVILFDPNKEEQRKEAERLNRFMVH 216
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match: A0A843UNM9_COLES (Uncharacterized protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843UNM9_COLES) HSP 1 Score: 115 bits (287), Expect = 3.190e-29 Identity = 53/89 (59.55%), Postives = 64/89 (71.91%), Query Frame = 1 Query: 1 ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMVH 267
ELWR RKEALW+ + P E + TDVCVP+S LA+ I +SK ELDASPL ++AHAGDGNFH +I+FD NN EA RL+ FMVH
Sbjct: 110 ELWRIRKEALWACFAMEPGFEAMITDVCVPLSHLAECISLSKKELDASPLVCMVIAHAGDGNFHTVILFDPNNEDQRHEAERLNHFMVH 198
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Match: UPI000B8C804E (D-lactate dehydrogenase [cytochrome], mitochondrial-like n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8C804E) HSP 1 Score: 112 bits (279), Expect = 3.520e-29 Identity = 50/88 (56.82%), Postives = 65/88 (73.86%), Query Frame = 1 Query: 1 ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLPAPIVAHAGDGNFHALIMFDKNNPKHVDEAHRLSSFMV 264
E+W+ RKEALW+ + P+ E + +DVCVP+S LA+LI SK ELDAS L ++AHAGDGNFH +I+FD NN +H EA RL+ FMV
Sbjct: 45 EIWKIRKEALWACFAMEPNFEAMISDVCVPLSHLAELISSSKQELDASSLVCTVIAHAGDGNFHTVILFDPNNEEHRKEAERLNQFMV 132 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10607.395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10607.395.1 >prot_H-paniculata_contig10607.395.1 ID=prot_H-paniculata_contig10607.395.1|Name=mRNA_H-paniculata_contig10607.395.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp ELWRERKEALWSLIGLYPDLECLTTDVCVPVSRLADLIGVSKIELDASPLback to top mRNA from alignment at H-paniculata_contig10607:4729..5844- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10607.395.1 ID=mRNA_H-paniculata_contig10607.395.1|Name=mRNA_H-paniculata_contig10607.395.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1116bp|location=Sequence derived from alignment at H-paniculata_contig10607:4729..5844- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10607:4729..5844- >mRNA_H-paniculata_contig10607.395.1 ID=mRNA_H-paniculata_contig10607.395.1|Name=mRNA_H-paniculata_contig10607.395.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=540bp|location=Sequence derived from alignment at H-paniculata_contig10607:4729..5844- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |