Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 469 |
| Cds size | 372 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10600.393.1 >prot_H-paniculata_contig10600.393.1 ID=prot_H-paniculata_contig10600.393.1|Name=mRNA_H-paniculata_contig10600.393.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=124bp
MVDVIQSTLQRVRYSFRQSILRNRGCLPCCGSRRHHSISDSRSSDDGDDG
DEDYHNPYPLPCSPSHCCRSSPCCGADNGADNGGAGGGDDGCCYGWLSYM
TSCWDWLPLGGGFNPRGNMTADDA back to topmRNA from alignment at H-paniculata_contig10600:2352..8350+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig10600.393.1 ID=mRNA_H-paniculata_contig10600.393.1|Name=mRNA_H-paniculata_contig10600.393.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5999bp|location=Sequence derived from alignment at H-paniculata_contig10600:2352..8350+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAAGCGAAACTGCCGCAGGTGCTCCGTTTTTTTTCCTTGCTGCAGCGGGG
GCGAAGAGACGCAGTCACGTCGACGGGAAAGTGTGAAAGAAGGCCATGGT
CGATGTGATTCAATCGACTTTGCAGCGGGTGCGGTACAGCTTTCGCCAGT
CAAGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGGAGATGTGATTTTCGGTGTTAAGGTTTCAG
TTGCCACATGACTAAATAGTTGGTTCTAGCTGCAAGGCTGACCCAGACGG
TTTTCCTCTCATGTATAGATTTTATTTGTAGTCTTTCTGGACACAGTTGC
CAACGGCTCCCGGATCTTGGATCTTGGATCTTGGATCTTGGACAGCCAGT
AGTAGCGGAATCCAAAGTAGGATTTCGATATAGGAGGCAGGGGTTTAGGG
ATCCCTGTAACCGCCAGAAAACGTGCTCTCCACTAACCCTCTAGGAACCG
TTTACCTCGTGACGACCAAAATGTATATTTTCTCACGATCAGTCTTGGAT
CATGACTATATATCGTCGAACTGGTTACAGCCGTTTTTCCATGTGGGCGG
TTTTAACCGATTTATTTTTTGGCAGTAATAGTAAGAAATAAACAGTTCCA
GCGCCGTCCGATCTTCTACGATGTCACCGTTAAAATTGATGTAAGATCGT
TTTTTCATTCTTTTTAAAGTGCCTCGATAAGACATGGCCTAACCAGCTCT
AGACTGCTGATCAAAATATCTCAAGACCCGAAAGCCTGTCCTTCGTTTTT
TGTTGCCGACTGTGGCCTTACGCTCTTAGATTATTGAGTGGAAAGACAGA
ACGGGCAAGTGCCAGGCGTCTTTAGGATCGGGCTACTGTAGGGGGGGGGG
GGGTCGCTGAGTCGCTTTTTTCCCGTTTCGAGCCACTTTTGGGAGCTGCT
CGGCAAAACGTCTTCTCTCTCTTGAACAGTACGGTCGTTCCGAATTGTGG
ATTGTGTGCCTCTAGAGATGCGTGAACGCGCGCCGTTGAGCAGGTTTGAA
ATTGGTTTGTTTGGTTTTGATGTCAGTTTTTTAGAGCCGCTTTTCGAAGT
GGTCCTTCGTCAAAGAGGTGGCTTGAAAGCCCTCCCTCCCCCAATACCGC
AGCCCGAGTCTCGTTTCACTGTTACCCCCCCAGAGCATACATGAATACTT
GATAATTATTTCCACAAAAAAGTTTTTTTTCTACGTTTCCGAATGAGCTC
GTGTATTCTATGTTCCCCGGGCCATTATTCACGACTGCTAATAATGCTCG
TACATGGAATGGACAGGAGTGGGTACTTTATCCCATGTGTCCGCTCGTTC
TGAAACTCGAGCGAATATTTTTTTATATTCGTGGCGAATACACAAAATTA
TTCGTATTTTTCCGGGGGGTGCACTGTTATTCGGAAGAATCGTAAGAAGG
TGGCCCGGGGGCATATGAAATAGGTGATGCTTATATCTGAATCTTTAGGC
GAATACTCTTCAACATTTGTCATGAATGCTCCGATCCAAGTACCCGTTTG
TATTCGTCCTCGGGCGCAAGTTTATCGTGACGGCGTATATGTTATGTTCC
AATGTTTTGTTTTTGTTTTGCGTTTGCAGCCCTTGGTGTGTGCACATCAT
GACTTGGTGTTTTTTTTTTCATTGCGTTATCTAGAGTAACGCTCACGGAT
AGGCGGGTCTGTACTATATTTTGGTCATATTCTAGGGCTTTGGGATGTCA
GTTTATATACACGTGAGAACGTGATTCTTGCAGGAGAGTAGTCTGACCTT
CGCGAGAGCAACGCCCGCTCTGTAGATCAGGTCTAAGGGTCATCTCTAGC
GACCGCGTTTTCGGCGGAAATTTACGAAATGTAGACATAACGAAATAAGG
AAAATTTGGCTGAACGTCAAGGCAGTCAAAATCCCCACAATTCAAAATTC
CTAACGGGTCCGAGCGAAAAAATTGGGCGATATCAATACAATCAACCCCC
CGTTTGGAATCTTGTGAAGTCTGGAAATGAATTTTTGAAGTCAAAACGCC
GTCATAGAGCCTTCATATCGTTACTCAGTCTTCGTACTTACTCAACACGT
ACAATTTTTGTGGAGAGGTAGGTGCACTCATGGTCTTGATTCGAACACTC
CACGAAGGGGTGAAAAGAACCTGCTGGCAAATAATGACGTTTTTCGAGAG
GGTTTCGGAAAATGCCACGAGTTGTCGTACCGTCACGAACTGTAAATTTC
TGAAAGTCGCGATGACCGCCTCATTGACCTTCGGCAATCTGCCCTCATTC
AGGTGTGTGGAATGAAATATCAATTCTCGGGCAGGAGCATCCGATCCGAT
GGCATCAGCAGGATTTACCAGTAGAAATGAAATCGATGAAGTAGGGAGAA
AAACTAACCCTTAAGGCTGTGTCTTATCGGTGCAGTTTGAAAGCGATTTT
GAATCGCTGTTTCCCACGACTAATAAATTCGAATTTTTTTGTTTTGTGTA
TTTTTTTCGCGCCGGATGACGACAAAACTACCCAAGTAGAAGAAAGTGAG
CCTCAATCACGTTTTTTTTTTTTTTTCTAATTAATAAGAAATCCAGCCTA
AGAGATGGGGTTCAAGTTTGGGCCTTGTACTGAGTCCTATTAAAAAAAAA
AAGAAGGGTATACTTAGTGCGTACGATTGTTGCCAAAAAAAGATTTGGAG
CTTCACTGAAAATAAGGAAGGTCTAGAAGTATTAGTATACAGAGGAAGAC
AGAGTATAAGGATAGGTTGAAGGGATACCTTACATATGGGTCATTGGACA
CAGGCATATTGTCAAATTTGGACGGGGGGATCTTGATTTCAAGGAACTTT
TGTAGAAAACGAGTCGGTAAGCATTTAATGCCTACTAACTAGTCCATGGT
ATAATCATTTTCGAGCCTAATGGAGTATGACCTTATAATTCGCTGTGCGG
GGGTTGTTTATTCCTTTGGCCGTTACGAAACGGCCAGGTGTTTGTCCATT
CTCGCTTCATGAGTATCGCCACGGTAGAGGGGGGGTATAATATTCACTGA
GAGTCGATCCTCAATTTGTCTAACAAAGGAAGCTTAAATCAAAACCTAAG
TCAATGGCCTGCTTTTATGCATCACCAAGGGTCACAAGGCACGATTTTGA
ATGGTCGTTGTGTTGAAGGGGAATATATATTTATATATTGTCTGCAGTGC
CGCTTTGTTAATCGACTCCAAACCGGAGACAAGTCGACTCGAGTACATCC
CCCCCTTGTGCCGTAGCTCGACAAGGCACACAGTTGAACGTTCAAGGGAG
AACGCGGGGTGTTGACCTGAAGCAACGCAAAAGCGATTCAGCGCAGTAGA
CGTAGATCAATTATATACTCAAGCGTGACTGCGGTATGCGTGCGGAGACT
GAATTCATGTTGTGGGAGAATGCCTCCTGTATAAAGAAAAGGGAGGAGCT
TGTATGTAAGTGACTTACTTGGGAGGCCTTTAAACCCTGGAATTAGAATA
AGGTGGCAGTAACGATTCTAGCAGATAGAAATTGGCCTTGAGCAGGCGAC
GGTTGGAGTAGATAGGGTATGTACTCCGGAGTAGTAGTACAGTGTAAAAC
ATGTTGGAGCCAGTGTGTGTTGGCAAAGCAGCAAAGAGCGATTGGCCATC
GGAAGTCCCTTCAAAGCCCCGTCCCCGTCCCCTCCCGACGATTACACGCG
TGTTCATTGGTCTAACAACTTCGGCATGCGAAACGTGAGTACCCCCCCCC
CCCGTCGGAACCTCCGTCTTCCCGAGGACACGTGGTCAATGGTTTACCAT
AAAAACTACGGTACCTAAAACATGCGAGTAGTTCCCCCCCTCCGCCCTTG
TTGGTTTGGTTTTATGGTAATAAGTGTACACAAGTCCCGATTGAAGACAC
ACAGAAATATTCCGAAGAGTGGAAGTAGCGGAAAGGGTTTTTTGCCTGAA
CTTCCGGGGGTTAAAAAAAAGAAGAAAAAGTCCAGATTGAAGTCAAGTGC
ATAATCCGAGGCAGCAATTCGGGCATAGTCATGTCGTTTGTGCCCTTATC
CCGTCGTAATTTCTCTCTCGTTCTTTCTTCCAGTATTGCGGAACAGGGGC
TGTTTACCTTGTTGCGGTTCTCGAAGACACCACAGCATCTCCGACAGCAG
GTCTTCGGACGACGGTGATGATGGCGACGAGGATTACCACAACCCGTACC
CGCTTCCTTGTTCGCCGTCCCATTGCTGTCGTTCTTCGCCGTGTTGTGGT
GCTGATAATGGTGCTGATAATGGTGGTGCTGGTGGAGGTGACGATGGGTG
CTGCTACGGTTGGTTGTCTTACATGACGTCTTGCTGGGATTGGCTCCCGC
TAGGTGCGAGCGGAGTGGAGCTATCATACTATTGTAAATGTACAGATTTG
CTGTTAGTTAGCCCTTTGGGGTAGGTAGAGCGTATGAATCCCCTCCTCGT
CCACCCCCTAAATCTGCTGTGCCGGGCGGGTTTATTTTCTTGGCGGTTAT
GAAACGGTGGTCGTTACGAAATGTTTGCTGTTACGAAACTTTGACCGGTA
CCAAGCTTTGGCCGTTACAAAACAAGGCTGGTGTTCGTGGTTGCCTGTTC
TCACTCTACACTAAAGACAAGATAAAAGGTCGCTCTAAATGGTAAATCCC
CTCCCCCCCCCCCCCCCCCCCCGCTACAAGGTATCGTACTATAAACCAGC
TGTGCAGGGAAGTTCTCGCGAAAACGAAGGGTTACGTTCTCCCTTCAAAA
AGTCTCGATAAGTTATACATGGTACGAAGTGTTTTTTTGTTGGAGAAGAA
TACACAGGAACACAACATTTTACTCCACGAAAGGAAGTCGTGTATTTTTT
TTTTTTTTTTTTTTCTCTCTGTCGTAAAGTTTTTAGGGGGCCACCGCAAG
CTACGTCAGTGGCGATTGGTTCGACCGAACCGGGGTGGCGCCTACCTAAC
AGAGGAATAAATAACTCTGTTCTGTTAAAGGAAATGTAGAAATACTTTAG
TAAAATACTTAAGTATGGAAGCATTGGTAAAGGTTTTTGCCTCAGCCTTC
CGGGGATTAAAAAAAATATGTTAGTGGCGAATGACACTGGGCAAAAATCA
CTCAGACAGAGAATAGAAAATGTTCTAAGAGTAACGTCAATACCATCACT
ACCGTATTAACCATCCAGGAACCGGACTTCGTAACGGCCATTAGATAGAT
TTGCTAACGACTAGTTTTGTAAATAATGAACGAATACGTGAAGGATACTG
TTTACAGCCCATCTCTGGTTGTAGTCGTAGGTAGCTGGTTAGTTTAGTAA
TATCTCAGGTGGAAAACGGGGGTCGTGTGTTTGATTATCATTCGAGGGCT
TTTATATCTAGGATTTTGTCACGTGTAGGGTGCTTGTTGCTTCTTGGGTC
GTTACGAAAAGAAGCCAGTGTTTGCCCCGTTCTCGCTCCATGTTAAATCC
AAGATCAAGCCCCTTCAAGCAGCAAATAAACGACCCCGTTATGCACTGGA
GATGCCCTAAACCATTATCTAGAGCTGGCCAGGATGGTGTCTAGGTATTC
GTCATTATTCACGACTGGTCGTTGGTAAGGTACTTCCATCTTTTGGACGT
TGCGAAGTCTGGTTCCTAAAGTAGAGATAATGCTTACCCAACTAGTAAGA
GCTGGCTGGATAGTTTAGTAATATCTCAGGTGCGACAGGGGGGTCGTGTG
GTCTATTTTTCCGTTTGCGTGCCTTTTTTTATTTTTGGATTTATCCAAGT
GCAGAGTTTGTTTGAACGGTCATAACACATTTTTTTTTTTTTTTAATCCT
TGTAAGCGATCCAACGATAAAACCAGCAGATCGTTGCTCCAGGGCTCTGA
AGATAGAGCTAATAGGTTAAAATTTATTGAAAATTATTACTTGAAAATAA
ATTGTAATGATTCTCGTGTTCTCCTTGCCGTGATCGGTTTTTCATTTTCA
TGCAGGCGGTGGATTTAACCCCCGCGGTAACATGACGGCCGACGACGCT back to topCoding sequence (CDS) from alignment at H-paniculata_contig10600:2352..8350+ >mRNA_H-paniculata_contig10600.393.1 ID=mRNA_H-paniculata_contig10600.393.1|Name=mRNA_H-paniculata_contig10600.393.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=744bp|location=Sequence derived from alignment at H-paniculata_contig10600:2352..8350+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTCGATGTGATTCAATCGACTTTGCAGCGGGTGCGGTACAGCTTTCG
CCAGTCAAATGGTCGATGTGATTCAATCGACTTTGCAGCGGGTGCGGTAC
AGCTTTCGCCAGTCAATATTGCGGAACAGGGGCTGTTTACCTTGTTGCGG
TTCTCGAAGACACCACAGCATCTCCGACAGCAGGTCTTCGGACGACGGTG
ATGATGGCGACGAGGATTACCACAACCCGTACCCGCTTCCTTGTTCGCCG
TCCCATTGCTGTCGTTCTTCGCCGTGTTGTGGTGCTGATAATGGTGCTGA
TAATGGTGGTGCTGGTGGAGGTGACGATGGGTGCTGCTACGGTTGGTTGT
CTTACATGACGTCTTGCTGGGATTGGCTCCCGCTAGTATTGCGGAACAGG
GGCTGTTTACCTTGTTGCGGTTCTCGAAGACACCACAGCATCTCCGACAG
CAGGTCTTCGGACGACGGTGATGATGGCGACGAGGATTACCACAACCCGT
ACCCGCTTCCTTGTTCGCCGTCCCATTGCTGTCGTTCTTCGCCGTGTTGT
GGTGCTGATAATGGTGCTGATAATGGTGGTGCTGGTGGAGGTGACGATGG
GTGCTGCTACGGTTGGTTGTCTTACATGACGTCTTGCTGGGATTGGCTCC
CGCTAGGCGGTGGATTTAACCCCCGCGGTAACATGACGGCCGACGACGCT
GCGGTGGATTTAACCCCCGCGGTAACATGACGGCCGACGACGCT back to top
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