mRNA_H-paniculata_contig1060.392.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_H-paniculata_contig1060.392.1 vs. uniprot
Match: D7G4P3_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4P3_ECTSI) HSP 1 Score: 689 bits (1778), Expect = 8.070e-227 Identity = 353/660 (53.48%), Postives = 442/660 (66.97%), Query Frame = 2 Query: 272 HPLCYFDDRPTDFEEVLTFCPE--AQDGACCNDAEEAMVEAIFEAQLPL----SEECASYYKQVVCGVCHSYSAHLYEVLGRELGNDGMMMKNDFCTELVSACMGEINFPTYEDMDYCTKHTGGGKDMFWSYPYTEAAIFDSGLTEFF-DEGAGIPPD-ALALHMSPDESVWWVCGISGQIVEISADDRLTSKLVMDMSEHPD---LKLSKEEGLLNFAFGPSFHSN---SRFYVSFTV--TSATGDHNRLSRFDYDYDDAAATLASEEILLESTERTSTVHTAGWLGFKPSSYYSSDSSHDLYWGQGDSGNQEDPDNHGQNAMDMHGTMVRITVPTDGGGYSVPTGNYEGG-MPEVCAIGIRNPWKCSFDRETEELYCGDVGQTRVETIKIIECGKNYGWGQFEGNRCQEATE-YRFG-SCADADRSDITFPWYEYCHPDYYSDGADEADFVNGVDVCGSRAVTGFAVIGGYVYRGSYFADVLYGAYVFGDAQTANIYYVRKSSDGEMTVGSIISDKSVSPVSFGEDANGELYVIDREYKIYPLPCGDLCATTCLEQSDTKPTYEPEGCFTDPASDRPLSIDAPTCDEGKDGMSPDICASFCATQAGAVYFGVEYAKECFCGTAADDIAKHGELSASSCNMLCKGFPEATCGGKNAIEV 2194 HPLC+ DD+PTD+++VLT+C A GACC + EE +VEA F A + S CA+ YKQVVCGVCHSYSAHLYE L DG+ MK++FC ELV C I FPTY+ YC HTGGG D FWSYPY E IF+ GL E F D G G PD +++ +PD S WW+ GI+G+I + +D+ S+LV+D+S + EEGLL+ AFGP F + + FYVS+TV NRL+RF Y D T ASEE+LL + + +++H+AGWLGFKPS Y +S S DLYW GD G Q DP+NH Q+ M G M+RITVP+DG GY++P+GNY GG + E+CAIG RNPW+CSFDRE + LYCGDVG T VE I ++ECG NYGW +FEG+RCQEA E F +C RS TFP YEYCHPDY S G DE F G D+CG R + G AVIGGYVYRG+YF+D+L GAY+FGD+ NIYY+ + DG ++G+IISD SV +SF ED NGE+ ++D ++ IY +PCGDLCATTCL+Q++ +PTY+ GCF D DR L A C EG+ MSP ICAS+C TQ GA YFGVE++ ECFCG++ D KHG L S C LC P+ CGG AIEV Sbjct: 18 HPLCFIDDKPTDYDQVLTYCDNSIAMSGACCTNEEEDIVEANFNAAFGVGVVPSTACAALYKQVVCGVCHSYSAHLYEYLTDGGMLDGLTMKSEFCEELVDECAAYIEFPTYDGTSYCDHHTGGGNDFFWSYPYEEPEIFEPGLNEVFPDLGDGEQPDDTVSVRQTPDGSQWWLLGIAGEIYAVDSDNMDDSELVIDVSGSVTGGTFYVDYEEGLLDVAFGPMFSESGYPNYFYVSYTVDLNDDLMQRNRLARFTYIPGDPEGTKASEEVLLTTVPKYNSIHSAGWLGFKPSVYGNS-SPQDLYWTTGDGGPQTDPENHSQDTQTMLGAMMRITVPSDGDGYTIPSGNYGGGALDEICAIGFRNPWRCSFDRENDNLYCGDVGHTFVEEIDLVECGNNYGWSRFEGSRCQEAVEDNEFNPACDGISRSGFTFPLYEYCHPDYQSTGDDE--FTAGNDICGDRVLLGNAVIGGYVYRGNYFSDLLNGAYIFGDSTMKNIYYLVEE-DGGWSLGTIISDASVQIISFSEDINGEIVLLDLQHNIYHMPCGDLCATTCLDQTEDQPTYDSVGCFADEVDDRALPDQADNCGEGETAMSPSICASYCETQ-GATYFGVEFSYECFCGSSTADFDKHGSLPDSECEYLCDANPDQFCGGFGAIEV 672
BLAST of mRNA_H-paniculata_contig1060.392.1 vs. uniprot
Match: D7G6T7_ECTSI (WSC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6T7_ECTSI) HSP 1 Score: 647 bits (1670), Expect = 4.310e-211 Identity = 346/686 (50.44%), Postives = 438/686 (63.85%), Query Frame = 2 Query: 224 SLVLIGLSYLRQGAEGHPLCYFDDRPTDFEEVLTFCPEAQDGACCNDAEEAMVEAIFEAQLPLSEECASYYKQVVCGVCHSYSAHLYEVLGRELGN-DGMMMKNDFCTELVSACMGEINFPTYEDMDYCTKHTGGGKDMFWSYPYTEAAIFDSGLTEFFDEGAGIPPDALALHMSPDESVWWVCGISGQIVEISADDRLTSKLVMDMSE---HPDLKLSKEEGLLNFAFGPSFHSN---SRFYVSFTVTSATGDH--NRLSRFDYDYDDAAATLASEEILLESTERTSTVHTAGWLGFKPSSYYSSDSSHDLYWGQGDSGNQEDPDNHGQNAMDMHGTMVRITVPTDGGGYSVPTGNYEG-GMPEVCAIGIRNPWKCSFDRETEELYCGDVGQTRVETIKIIECGKNYGWGQFEGNRCQEATEYRFGSCADADRSDITFPWYEYCHPDYYSDGADEADFVNGVDVCGSRAVTGFAVIGGYVYRGSYFADVLYGAYVFGDAQTANIYYVRKSSDGEMTVGSIISDKSVSPVSFGEDANGELYVIDREYKIYPLPCGDLCATTCLEQSDTKPTYEPEGCFTDPASDRPLSIDAP--TCDEGKDGMSPDICASFCATQAGAVYFGVEYAKECFCGTAADDIAKHGELSASSCNMLCKGFPEATCGGKNAIEVFSLGDPDPTPSPVAIVA 2245 S+ ++ L L HPLCY DDRPTD +E+L FCPEAQ GACC DAEEA+V+ EA L+ +C YKQVVCGVC SYS HLYE LG ELG DGM MK+DFC EL +PD S++W+ G +G+I + DD T V+D+S +L + EEGLL AF P F ++ + FY+S+TV G++ NRLS+F Y D A TLASEE+LL S + ++H+AGW+GF+PS+Y + S HD+YW GD +Q DP+NHGQ+ ++ G+++RI+VP DG GY +PTGN +PE+CA G RNPW+CSFDRET+ELYCGDVG T VE I I+ECG NYGW +FEG+RCQEA E R G C D DRS TFP YEYCHPDY SD ADEADFV GVD+CG+R V+G AVIGGYVYRG+YFADVLYGAYVFGD + NIYY+ + + G +VG+IISD SVS + F ED NGEL VID++Y IY LPCGD+CA+TCL+QSD +PTYE GCF D DR L D C + MSP ICAS+C T GA Y GV+Y ECFCG +D ++HG ++++CNM C G+P +CGG +IEV+ LG+P+ + S ++A Sbjct: 9 SIAIMLLGALITLCASHPLCYVDDRPTDPDEILEFCPEAQSGACCTDAEEALVQLRHEAVGNLTGDCDDLYKQVVCGVCGSYSGHLYERLGAELGVLDGMTMKSDFCEEL----------------------------------------------------------------TPDSSMYWLVGQAGEIKMVDLDDLSTMTTVVDISSGLSSGELYVDYEEGLLGLAFSPLFSTDGYPAYFYLSYTVELDDGENQRNRLSKFQYFAGDPAFTLASEEVLLTSAPKIGSIHSAGWVGFQPSAYGTIASYHDIYWTTGDGASQTDPENHGQDTTNLLGSVMRISVPADGTGYEIPTGNLASPALPEICASGFRNPWRCSFDRETDELYCGDVGHTLVEEIDIVECGNNYGWSRFEGSRCQEAQESRDGPCLDTDRSAFTFPIYEYCHPDYSSDDADEADFVAGVDICGTRMVSGTAVIGGYVYRGTYFADVLYGAYVFGDNTSNNIYYIVQDN-GVWSVGTIISDSSVSVIGFAEDNNGELMVIDQDYNIYQLPCGDMCASTCLDQSDQQPTYESLGCFVDVLGDRALENDDAIRACLVDERVMSPAICASYCYT-LGATYAGVQYGFECFCGVDSD-YSRHG--TSTTCNMECTGYPSESCGGVFSIEVYELGEPEASDSSALLLA 625
BLAST of mRNA_H-paniculata_contig1060.392.1 vs. uniprot
Match: D7FJP1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJP1_ECTSI) HSP 1 Score: 619 bits (1597), Expect = 7.710e-196 Identity = 400/1062 (37.66%), Postives = 551/1062 (51.88%), Query Frame = 2 Query: 197 VTIMRAAAASLVLIGLSYLRQGAEGHPLC-YFDDRPTDFEEVLTFCPEA-QDGACCNDAEEAMVEAIFEA-QLPLSEECASYYKQVVCGVCHSYSAHLYEVLGRELGNDGMMMKNDFCTELVSACMGEINFPTYEDMDYCTKHTGGGKDM-----FWSYPYTEAAIF-DSGLTEFFDE--GAGIPPDALALHMSPDESVWWVCGISGQIVEISADDRLTSKLVMDMSEHPDLKLSKEEGLLNFAFGPSFHSNSRFYVSFTVTSATGDHN---RLSRFDYDYDDAAATLASEEILLESTERTSTVHTAGWLGFKPSSYYSSDSS-HDLYWGQGDSGNQEDPDNHGQNAMDMHGTMVRITVPTD--GGGYSVPTGN----YEGGMPEVCAIGIRNPWKCSFDRETEELYCGDVGQTRVETIKIIECGKNYGWGQFEGNRCQEATE-YRFGSCADADRSDITFPWYEYCHPDYYSDGADEADFVNGVDVCGSRAVTGFAVIGGYVYRGSYFADVLYGAYVFGDAQTANIYYVRKSSDGEMTVGSIISDKSVSPVS-FGEDANGELYVIDREYKIYPLPCGDLC---------ATTCLEQSDTKPTYEPEGCFTDPASDRPLSIDAPTCDEGKDGMSPDICASFCATQAGAVYFGVEYAKECFCGTAADDIAKHGE-LSASSCNMLCKGFPEATCGGKNAIEVFSL-GDPDPTP----SPVAIV------------------------APETETVVIAPEY---SYVGCFIDNL-DRVLKGTYFPELDEMTTMGCSILC--AGSTFFGTQNGDECLCGESDDDYDALGEGTCDTACAGDSSETCGGKFALDVYLYDDADPVPGPTPVKTPDDYEYSGCYIDDGLNRVHSGPFFKGI-PTMTPEDCNERCKGSPFFATQFGDQCFCGMPGDDYAALGEGICNFDCAGDETQVCGGRDAMSVYVMKEYEPDTYSFLGCYRD-DIPRVMSGTFKKNDPMMTLMSCAIFC-EDSSTYFGLEDADECWCGDATDIP---DVYGEATCDDPCSGDESETCGGRWALSVYQFD 3160 VT + + AAS + LS G E HPLC Y DR TFCP+ +G CC EEA++ + A + LS ECA YK+V+CGVC YSAHLY L E+G+DG+ M DFC V AC ++ D YC +H D +WSYP A F ++ +T F + +PP+ +A+ M+PD S WW+ G++G I ++ D + V+D+S+ D S E+GLL FAF PSF FYVS++V N RLS+F Y D AT SEEILL STE+ S+VH++GW+GF PSSY + + HD+YW GD G Q DPDN Q+ ++HG++VRI+VP+ G GY +P GN G PE+CA G+RNP +C+FD T+ELYCGDVGQ RVE + +IECGK+YGW FEG+RC + E Y G C+ DR+D FP +EYCH DY S + +F D CG R VTG +VIGG+VYRG+ + D+L G Y+F D +++++ ++ G T G+++S S+ + F E +GELY++ + IY LPCGDLC ++ CL QSDT PT+E GCF D AP CD M+ ++CASFCAT GA +FG++Y +EC+CG DD ++G+ L + C+M C GFP CGG++ + VF++ GD P+ +PV+ AP T T+ +Y+GC+ D+ DR L Y D M+ C C AG++ F + G +C CG + D++A G CDT CAG CGG A+ VY + +P TP P S Y DD S K + P P + P F+ P Y GG + Y+ S LGCY D R++ +++ M T C FC E S FGL+ ECWCGD + EA CD C+GD++ CGG + VY+ + Sbjct: 6 VTKIASVAASSAALILSLPSPG-EAHPLCLYGPDRAVSTTAEATFCPDVLAEGFCCEPNEEAVLSEKYAAIEGALSAECAPLYKEVLCGVCSPYSAHLYTRLA-EMGDDGLAMTRDFCDGFVMACGTDLAL----DATYCDEHVLDYSDENAAREYWSYPLDITAGFNEASVTAAFPDLPEEDLPPEPIAMQMTPDGSAWWIGGMTGYIKMAASQDPTDAIDVLDISDRADF--SYEQGLLGFAFSPSFTETGLFYVSYSVAGVMNPENGLNRLSKFVYYAGDVVATSGSEEILLTSTEKGSSVHSSGWVGFAPSSYADPEGAYHDIYWTVGDGGPQNDPDNKAQDMTNLHGSIVRISVPSTAMGTGYEIPAGNPFDGANGEKPEICAWGLRNPHRCAFDTATDELYCGDVGQDRVEEVNVIECGKDYGWRMFEGSRCNDGFEGYDGGECSGLDRADYAFPVFEYCHVDYDSS---QEEF----DACGDRTVTGLSVIGGHVYRGAKYDDILGGHYIFADHSVGSLHHLAPAAGGGWTAGTVLS--SIPKIGGFAEGNDGELYMVGYQGNIYDLPCGDLCESGEEQKEASSACLPQSDTTPTFEEIGCFLDGEPKTMTLSTAPGCDGT---MNAEMCASFCATVEGATHFGLQYQRECYCGGEGDDYVQYGDQLDDAECDMPCSGFPTQMCGGRSKMNVFAITGDGAPSEDAAATPVSTASXXXXXXXXXXXXXXXXXXXXXXXAPPTTTMTSEASSFPDTYMGCYGDDKGDRALTFAYTAS-DTMSFEECECFCSAAGASIFALEYGRQCFCGTDETDFEAYGPAVCDTPCAGSPDTVCGGYDAMSVY---NIEPEAATTPTAPPT--TASPIYSDDESEPSSSASSEKEVYPDYIPSSVSTE----PIFSEV--------RPSSAYYYFS----------------GGEPS--------YDATVGSHLGCYLDVRNDRLLRSDMTESEDM-TPAVCGAFCGEGGSEVFGLQYGTECWCGDLASFSGAVEADDEALCDYECAGDDTVRCGGYLYVDVYRIE 1004
BLAST of mRNA_H-paniculata_contig1060.392.1 vs. uniprot
Match: D7G961_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G961_ECTSI) HSP 1 Score: 594 bits (1531), Expect = 3.600e-187 Identity = 392/1128 (34.75%), Postives = 524/1128 (46.45%), Query Frame = 2 Query: 203 IMRAAAASLVLIGLSYLRQGAEGHPLCYFDDRPTDFEEVLTFCPE--AQDGACCNDAEEAMVEAIFEAQLP----LSEECASYYKQVVCGVCHSYSAHLYEVLGRELGN-DGMMMKNDFCTELVSACMGEINFPTYED--MDYCTKHTGGGKDMFWSYPYTEAAIFDSGLTEFF-DEGAGIPPD-ALALHMSPDESVWWVCGISGQIVEISADDRLTSKLVMDMSEHPDLKLSKEEGLLNFAFGPSFHSNSR---FYVSFTVTSATGDH--NRLSRFDYDYDDAAATLASEEILLESTERTSTVHTAGWLGFKPSSYYSSDSSHDLYWGQGDSGNQEDPDNHGQNAMDMHGTMVRITVPTDGGGYSVPTGNYEGGMPEVCAIGIRNPWKCSFDRETEELYCGDVGQTRVETIKIIECGKNYGWGQFEGNRCQEATE-YRFGS-CADADRSDITFPWYEYCHPDYYSDGADEADFVNGVDVCGSRAVTGFAVIGGYVYRGSYFADVLYGAYVFGDAQTANIYYVRKSSDGEMTVGSIISDKSVSPVSFGEDANGELYVIDREYKIYPLPCGDLCATTCLEQSDTKPTYEPEGCFTDPASDRPLSIDAPTCDEGKDGMSPDICASFCATQAGAVYFGVEYAKECFCGTAADDIAKHGELSASSCNMLCKGFPEATCGGKNAIEVFSLGDPDPTPSPV-------------AIVAPETETV---VIAPEYS-------------YVGCFID-NLDRVLKGTYFPELDEMTTMGCSILCAGSTFFGTQNGDECLCGESDDDYDALGEGTCDTACAGDSSETCGGKFALDVYLYDDADPVPGPTPVKTPDDYEYSGCYIDDGLNRVHSGPFFKGIPTMTPEDCNERCKGSPFFATQFGDQCFC-GMPGDDYAALGE--------------GICNFDCAGDETQVCGGRDAMSVYVMKEYEPDTYSFLGCYRDDIP-RVMSGTFKKNDPMMTLMSCAIFCEDSSTYFGLEDADECWCGDATDIPDVYGEATCDDPCSGDESETCGGRWALSVYQFDDAPVDPRPTPIIVPESRPRKVAAT---------YMGCWSDTSDDRMMEEALVTDELTLELCESTCEGHAFFGLQYGNE 3367 +MRA A L+G+ + HPLC+FDDRPTD+ EVLTFC A GACC D EE V F P L+ +C++ YK+VVCG CHS+SAHLYE L ELG DGM MK+DFC EL++AC G+INFPTY++ +DYCTKHTGGG D FWSYPY EA L E F D G PD +++ +PD S WW+ GISGQI GLL+ AFGP F +S FYVS+TV G++ NRL+RF Y D AT A+EE+LL + + ++VH+AGWLGFKPS Y G E+CAIG+RNPW+CSFDR ++LYCGDVGQ VE I IECG NYGW +FEG+RCQEA + F C DRSD T+P +EYCHPD+ S ADE +F G D CG+R V G VIGGYVYRG++F+D+L GAY+FGD+ NIY++++ DG VG+I+SD SV +SF ED NGE+ ++D + IY +PCGDLC TTCL+Q++ +P YE GCF D +DR L +A C G+ MSP ICAS+C T G+ +FGV+Y+ + +P+ CGG + +EVF++ DP PT +P A +P T TV ++ P + Y+GCF D RV T + MTT C+ LC+ ++ TQ G E VY +DP P PV D Y GC+ D +RV S G +MT C + C ++ TQ+G + + G+ + + + + P +LGC+ D RV S MT CA C + + Y G ++ +Y P P P + Y+GC+ D+ R+ + +T +C TC +A++G Q+G E Sbjct: 1 MMRAFACLAALVGIKVVTS----HPLCFFDDRPTDYNEVLTFCDTSIAAYGACCTDDEEVQVMKDFSGVTPEGVELTGDCSNLYKEVVCGRCHSFSAHLYENLAPELGLLDGMTMKSDFCNELLTACGGQINFPTYDNNTVDYCTKHTGGGDDFFWSYPYEEAISDPRFLNEVFPDLGDNQQPDDTVSMRQTPDGSQWWLLGISGQIYA---------------------------GLLDLAFGPMFGDDSYPQYFYVSYTVLLDDGENQRNRLARFTYVPGDPVATRATEEVLLTTVPKYNSVHSAGWLGFKPSVY---------------------------------------------------------GSAEICAIGLRNPWRCSFDRLNDDLYCGDVGQISVEEINFIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSDFTYPLFEYCHPDFDSTDADEQEFTGGADTCGNRFVVGNCVIGGYVYRGNFFSDLLDGAYIFGDSTMRNIYFLKEEEDG-WAVGTIVSDASVQIISFAEDVNGEIVLLDYNHDIYHMPCGDLCVTTCLDQAEDQPAYESLGCFADDVNDRALPTEADNCGVGETAMSPAICASYCET-LGSTFFGVQYSFQA--------------------------YPDEFCGGFSTMEVFTIEDPLPTEAPAPTPLMNHSTTAPGATPSPTTTTVGPVLVGPSTAPTTPAPLDAGVAGYLGCFADAEAPRVFPETGMTGSNTMTTATCAGLCSDYAYYATQYGRE-------------------------------------VYSTS-SDPTETPAPVA---DNAYLGCFADSTTDRVLSVVIDSG--SMTTAICADTCAEYAYYGTQYGREIYSTGLVVETPSPVPDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPTEPGYLGCFADSTTDRVFSVVTGSGS--MTTAICADTCAEYAYY--------------------------------------GTQYGREIYSTGLVVETPSPVPDVXXXXXXXXXXXXXXXVTTEPGYLGCFGDSQTGRVFSVVTGSGSMTTAICAGTCADYAYYGTQFGRE 929
BLAST of mRNA_H-paniculata_contig1060.392.1 vs. uniprot
Match: D7G957_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G957_ECTSI) HSP 1 Score: 577 bits (1487), Expect = 1.310e-182 Identity = 356/932 (38.20%), Postives = 455/932 (48.82%), Query Frame = 2 Query: 272 HPLCYFDDRPTDFEEVLTFCPE--AQDGACCNDAEEAMVEAIFEAQLPLSEE----CASYYKQVVCGVCHSYSAHLYEVLGRELGNDGMMMKNDFCTELVSACMGEINFPTYEDMDYCTKHTGGGKDMFWSYPYTEAAIFDSGLTEFFDEGAGI--PPDALALHMSPDESVWWVCGISGQIVEISADDRLTSKLVMDMS----EHPDLKLSKEEGLLNFAFGPSFHSNSR---FYVSFTVTSATGD--HNRLSRFDYDYDDAAATLASEEILLESTERTSTVHTAGWLGFKPSSYYSSDSSHDLYWGQGDSGNQEDPDNHGQNAMDMHGTMVRITVPTDGGGYSVPTGNYEGGMPEVCAIGIRNPWKCSFDRETEELYCGDVGQTRVETIKIIECGKNYGWGQFEGNRCQEATEYRFGSCADADRSDITFPWYEYCHPDYYSDGADEADFVNGVDVCGSRAVTGFAVIGGYVYRGSYFADVLYGAYVFGDAQTANIYYVRKSSDGEMTVGSIISDKSVSPVSFGEDANGELYVIDREYKIYPLPCGDLCATTCLEQSDTKPTYEPEGCFTDPASDRPLSIDAPTCDEGKDGMSPDICASFCATQAGAVYFGVEYAKECFCGTAADDIAKHGELSASSCNMLCKGFPEATCGGKNAIEVFSLGDPDPT--PSPVAIV-------------------------APETETVVIAPEYSYVGCFIDN-LDRVLKGTYFPELDEMTTMGCSILCAGSTFFGTQNGDECLCGESDDDYDALGEGTCDTACAGDSSETCGGKFALDVYLYDDADPVPGPTPVKT------------------------PDDYEYSGCYIDDGLNRVHSGPFFKGIPTMTPEDCNERCKGSPFFATQFGDQCFCGMPGDDYAALGEGICNFDCAGDETQVCGGRDAMSVY 2860 HPLC+ DD+PTD+++VLTFC A GACC D EEA V F A P+ EE C YKQVVC CHSYSAHLYE LG ELG +A IF+ GL E F + A P D +++ +PD S WW+ GISGQI + +D S+LV+D+S + EEGLL+ AFGP F NS FYVS+TV G+ NRL++F Y +D AT ASEE+LL + + +++H+AGWLGFKPS Y + S DLYW GD G Q DP NH Q+ M G M+RI+VP DG GY++P+GNY G EVCAIG+RNPW+C FDR ++LYCGDVG T VE I IE NIY++R+ DG VG+IISD SV VSF ED NGE+ ++D ++ +Y +PCGDLCATTCL+Q++ +PTYE GC+ D +DR L I P C EG+ MSP ICAS+C T G+ +FGV+++ +CFCG + D KHG LS+ +C LC P+ CGG + IEVF++GDP PT P+P +V AP T V A Y+GCF D+ DRV F MTT C+ CA ++GTQ G EC CG + D YD GE TCD C GDSS+ CGG A+ Y P P P + P + Y GC+ D +RV S G +MT C C ++ TQFG +C+CG Y GE C+ C GD ++ CGG +AMSVY Sbjct: 19 HPLCFIDDKPTDYDQVLTFCDNSIASSGACCTDDEEAQVVVDFNAVTPVGEELTGDCPDLYKQVVCARCHSYSAHLYEYLGAELG------------------------------------------------MLDAEIFEPGLNEVFPDLADDQQPGDTVSMRQTPDGSQWWLLGISGQIYAVDSDSMDESELVIDVSGPVPSGGNFYDDFEEGLLDVAFGPMFGDNSYPQYFYVSYTVLLDDGEMQRNRLAKFTYFPEDPVATRASEEVLLTTVPKYNSIHSAGWLGFKPSDYGNPGYS-DLYWTTGDGGPQTDPFNHSQDETTMLGAMMRISVPADGTGYTIPSGNYPGAKAEVCAIGLRNPWRCGFDRLNDDLYCGDVGHTLVEEINFIE----------------------------------------------------------------------------------------------------NIYFLREEEDG-WAVGTIISDASVQIVSFAEDVNGEIMLLDYQHNMYHMPCGDLCATTCLDQAEDQPTYESLGCYADDVNDRALPIQGPNCGEGETAMSPAICASYCET-LGSTFFGVQFSFQCFCGPSTADYDKHGSLSSDNCEYLCDANPDFFCGGFSTIEVFTIGDPTPTEAPAPTPLVNPSTQAPXXXXXXXXXXXXXXXXSTAPTTPAPVNAGAAGYLGCFGDSQTDRVFSVVVFSG--SMTTAICASTCADYAYYGTQFGGECWCGNNAD-YDVYGEATCDMGCTGDSSDICGGFNAMSFYSTGSVVETPSPVPDEVTXXXXXXXXXXXXXXXXXXXXXVVPTEPGYLGCFGDSQADRVFS--VVTGSGSMTTAICASTCADYAYYGTQFGGECWCGNNA-AYDVYGEATCDMGCTGDSSEKCGGFNAMSVY 793
BLAST of mRNA_H-paniculata_contig1060.392.1 vs. uniprot
Match: A0A6H5KT40_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT40_9PHAE) HSP 1 Score: 475 bits (1223), Expect = 2.780e-149 Identity = 256/504 (50.79%), Postives = 321/504 (63.69%), Query Frame = 2 Query: 443 VVCGVCHSYSAHLYEVLGRELGN-DGMMMKNDFCTELVSACMGEINFPTYED--MDYCTKHTGGGKDMFWSYPYTEAAIFDSGLTEFFDEGAGIPPDALALHMSPDESVWWVCGISGQIVEISADDRLTSKLVMDMS----EHPDLKLSKEEGLLNFAFGPSFHSNSR---FYVSFTVTSATGD--HNRLSRFDYDYDDAAATLASEEILLESTERTSTVHTAGWLGFKPSSYYSSDSSHDLYWGQGDSGNQEDPDNHGQNAMDMHGTMVRITVPTDGGGYSVPTGNYEGGMPEVCAIGIRNPWKCSFDRETEELYCGDVGQTRVETIKIIECGKNYGWGQFEGNRCQEATE-YRFGS-CADADRSDITFPWYEYCHPDYYSDGADEADFVNGVDVCGSRAVTGFAVIGGYVYRGSYFADVLYGAYVFGDAQTANIYYVRKSSDGEMTVGSIISDKSVSPVSFGEDANGELYVIDREYKIYPLPCGDLCATTCLEQSDTKPTYE 1912 VVC CHSYSAHLYE LG ELG DG+ M +DFC ELV+AC G+I FPTY+ +DYCTKHTGGG D FWSYPY E + LT F L L S WWV ++D +S+LV+D++ + EEGLL+ FGP F S FYVS+TV G+ NRL+RF Y D AT A+EE+LL + + +++H+AGWLGFKPS Y S+D P NH Q+ M G M+RI+VP+DG GY++P GNY G EVCAIG+RNPW+C FDR + LYCGDVG T VE I +IECG NYGW +FEG+RCQEA + F C DRS T+P +EYCHPDY S ADE +F G D CG R V G VIGGYVYRG++F+D+L GAY+FGD+ NIY++R+ G VG+IISD SV VSF ED NGE+ ++D ++++Y +PCGDLCATTCLEQ++ +PTYE Sbjct: 4 VVCARCHSYSAHLYEYLGAELGMLDGLTMTSDFCEELVTACDGQIEFPTYDSGSVDYCTKHTGGGDDFFWSYPYKERS-----LTGF-----------LFLW-----SRWWV----------NSDSMDSSELVIDVAGPVPSGGNFYDDFEEGLLDVVFGPMFSVPSYPSYFYVSYTVLLDDGEMQRNRLARFTYVPGDPVATRATEEVLLTTVPKYNSIHSAGWLGFKPSDYGSTD-----------------PGNHSQDETTMLGAMMRISVPSDGTGYTIPPGNYPGAKAEVCAIGLRNPWRCGFDRLNDNLYCGDVGHTLVEEINLIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGVDRSGFTYPLFEYCHPDYDSTDADEQEFTGGADTCGDRFVVGNCVIGGYVYRGNFFSDLLDGAYIFGDSTMRNIYFLREEEAG-WAVGTIISDASVQIVSFAEDVNGEIMMLDYQHRMYHMPCGDLCATTCLEQAEDQPTYE 458
BLAST of mRNA_H-paniculata_contig1060.392.1 vs. uniprot
Match: A0A6H5JZF5_9PHAE (GSDH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZF5_9PHAE) HSP 1 Score: 466 bits (1198), Expect = 2.360e-145 Identity = 247/468 (52.78%), Postives = 308/468 (65.81%), Query Frame = 2 Query: 440 QVVCGVCHSYSAHLYEVLGRELGNDGMMMKNDFCTELVSACMGEINFPTYEDMDYCTKHTGGGKDMFWSYPYTEAAIFDSGLTEFF-DEGAGIPP-DALALHMSPDESVWWVCGISGQIVEISADDRLTSKLVMDMS---EHPDLKLSKEEGLLNFAFGPSFHSN---SRFYVSFTVTSATGD--HNRLSRFDYDYDDAAATLASEEILLESTERTSTVHTAGWLGFKPSSYYSSDSSHDLYWGQGDSGNQEDPDNHGQNAMDMHGTMVRITVPTDGGGYSVPTGNYEGG-MPEVCAIGIRNPWKCSFDRETEELYCGDVGQTRVETIKIIECGKNYGWGQFEGNRCQEATEYRFGS--CADADRSDITFPWYEYCHPDYYSDGADEADFVNGVDVCGSRAVTGFAVIGGYVYRGSYFADVLYGAYVFGDAQTANIYYVRKSSDGEMTVGSIISDKSVSPVSFGEDAN 1804 QVVCGVCHSYSAHLYE L DG+ MKN+FC LV AC I+FPTY+ + YC HTGGG D FWSYPY E IF+ GL E F D G G P D +++ ++ +D+ S LV+D+S + EEGLL+ AFGP F + + FYVS+TV G+ NRL+RF Y D A T ASEE+LL S +++++H+AGWLGFKPS Y + S DLYW GD G Q D +NH Q+ M G M+RITVP+DG GY++P+GNY GG + E+CAIG RNPW+CSFDRET++LYCGDVG T VE I ++ECG NYGW +FEG+RCQEA E + C DRS TFP YEYCHPDY S G DE F GVD+CG R + G AVIGGYVYRG++F+D+LYG Y+FGD+ NI+Y+ K DG ++G+IISD SV +SF ED N Sbjct: 35 QVVCGVCHSYSAHLYEYLTDGGMLDGLTMKNEFCESLVDACAAYIDFPTYDGVSYCDHHTGGGADFFWSYPYEEPEIFEPGLNELFPDLGDGEQPSDTVSMR------------------QVDSDNMDDSSLVIDVSGSVTDGTFYVDYEEGLLDVAFGPMFSESDYPNYFYVSYTVDLNDGEVQRNRLARFTYIPGDPAGTKASEEVLLTSAPKSTSIHSAGWLGFKPS-VYGNASPQDLYWTTGDGGPQTDYNNHAQDTQSMLGAMMRITVPSDGSGYTIPSGNYGGGALDEICAIGFRNPWRCSFDRETDDLYCGDVGHTFVEEIDLVECGNNYGWSRFEGSRCQEAVENNEYNPPCDGVDRSGFTFPLYEYCHPDYSSVGDDE--FTAGVDICGDRVLLGNAVIGGYVYRGNFFSDLLYGHYIFGDSTMKNIFYLVKEGDG-WSLGTIISDASVQIISFAEDVN 480
BLAST of mRNA_H-paniculata_contig1060.392.1 vs. uniprot
Match: A0A6H5KS07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS07_9PHAE) HSP 1 Score: 449 bits (1155), Expect = 4.550e-133 Identity = 335/1066 (31.43%), Postives = 470/1066 (44.09%), Query Frame = 2 Query: 446 VCGVCHSYSAHLYEVLGRELGNDGMMMKNDFCTELVSACMGEINFPTYEDMDYCTKHTGGGKDMFWSYPYTEAAIFDS-GLTEFFDEGAG--IPPDALALHMSPDESVWWVCGISGQIVEISADDRLTSKLVMDMSEHPDLKLSKEEGLLNFAFGPSFHSNSRFYVSFTVTSATGDHNRLSRFDYDYDDAAATLASEEILLESTERTSTVHTAGWLGFKPSSY----YSSDSSHDLYWGQGDSGNQEDPDNHGQNAMDMHGTMVRITVPTDGGGYSVPTGNYEGGMPEVCAIGIRNPWKCSFDRETEELYCGDVGQTRVETIKIIECGKNYGWGQFEGNRCQEATEYRFG-SCADADRSDITFPWYEYCHPDYYSDGADEADF-VNGVDVCGSRAVTGFAVIGGYVYRGSYFADVLYGAYVFGDAQTANIYYVRKSSDGEMTVGSIISDKSVSPVSFGEDANGELYVIDREYKIYPLPCGDLCATTCLEQSDTKPTYE-PEGCFTDPASDRPLSIDAPTCDEGKDGMSPDICASFCATQAGAVYFGVEYAKECFCGTAADDIAKHGELSASSCNMLCKGFPEATCGGKNAIEVFSLGDPDPTPSPVAIVAPETETVVIAPEYSYVGCFIDNLDRVLKGTYFPELDEMTTMGCSILCAGSTFFGTQNGDECLCGESDDDYDALGEGTCDTACAGDSSETCGGKFALDVYLYDDADPVPGPTPVKTPDDYEYSGCYIDDGLNRVHSGPFF-KGIPTMTPED--------CNERCKGSPFFATQFGDQCFCGMPGDDYAALGEGICNFDCAGDETQVCG--------------------------GRDAMSVYVMKEYEPDTYSFLGCYRDD----IPRVMSGTFKKNDPMMTLMSCAIFCEDSST-YFGLEDADECWCGDATDIPDV-YGEATCDDPCSGDESETCGGRWALSVYQFDDAPVDPRPTPIIVPESRPRKVAATYMGCWSDTSDDRMMEEALVTDELTLELCESTCEGH--AFFGLQYGNECWCGDSDTDYMKYDAGVCTYECPGDQDELCGGRNSMHVY 3484 +CG CH +S HL+E L + M + +FC+E C ++ P DYC H G D +WSYP F + GL + F + + IP + + + M+PD S WW+ G+ GQIVE+ D +K V+DMS + + EEGLL+ AF P+FH+ FY S+ + G NRLSRF YD D AA TLASEEIL+ S+E+ S VH+AGW+GFKPSSY S+ + H+L+W GDSG Q D + GQ+ +HG+++RI V ++ G +G+ EG +RNP++CSFDR ++LYCGDVG VE+IK IECG NYGW QFEG+RC + E +F +C DRS TFP + YCHPD+Y D + V+ +CG R+V G AVI GYVYRG+ + D+L G +F D +Y++ + G G+I D + ED +GELYV+ + I+ +PCGDLC+ + P + P T P + P+ P GA V AT S DP PTP+P+ +AP V + + G F + F T A EG + G ++ + D P P P E G + V P +GIP+ + C + S G + C +P D A D T+ C G D + + + E +LGCY DD R++ + +D M T M C FC S FG+E +C+CGD+ D YG CD PC+GD+S TCGG A+ + P P + + Y+GC +D DR + E + + +CE C A +GLQYG+ECWCGD D D+ ++ AG+C Y C GD CGG +S +VY Sbjct: 1 MCGTCHPWSGHLFERL-----DTAMTLTQEFCSEFYGECATQLGLPA----DYCVVHAGPEGDQYWSYPLVIDDSFSTDGLVKAFPDLSDSLIPDEPVDMRMTPDGSKWWILGLKGQIVEVDVADATWAKTVLDMSSL--VLWTFEEGLLSMAFSPAFHTTGVFYASYVNGPSFGT-NRLSRFKYDPDSAANTLASEEILITSSEKKSNVHSAGWIGFKPSSYGNDAVSAGAVHELFWAMGDSGPQLDTSDRGQDPNILHGSIIRIEVSSEMG-----SGDKEG---------MRNPYRCSFDRLNDDLYCGDVGHLDVESIKKIECGNNYGWRQFEGDRCMQQIEDQFPETCEFLDRSPFTFPEFNYCHPDFYP--VDHPSYIVSDQSICGDRSVIGTAVIAGYVYRGAKYDDLLGGNLIFADFTLNRLYHLFPTKGGGWGSGTIKGDDFFAVSHIAEDNDGELYVVQYQGTIFEMPCGDLCSG-----DNVNPVFPTPSPTETPPPTKAPI---VPAXXXXXXXXXXXXXXXXXXXXTGAP---VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVPAT---------LSPVDP-PTPAPMVXXXXXPVLATVAP----VXXXXXXTEAMTPGPVFATMTP-----------APLFVRT----------------ATPEGMPEPQDPGTAAPEARLSDSYDFDRMPIRTVTEPPMPAAPPSTPE--GTASPEAARPVVPAPATCRGIPSRLGQFWPGGKEGCCTHAIEESGILCADTGGEPPCRIPPKDETAPPPSPVVPDAPDGRTEPCTEPLIPAEPLEQPPVSPEDAALCTADLGEDVVPMTGPENDEVSPPEYLGCYIDDNDKFSSRILQLAYTASDSM-TPMMCEDFCRSSGADIFGVEFGHQCFCGDSRDTDLARYGTTVCDHPCAGDDSVTCGGHLAVDAFFMGGGPKVP--------------INSDYLGCQADKQGDRALGEGFLWCSGRMTICEQFCRRRKAAVYGLQYGHECWCGD-DMDHDQHGAGMCNYRCSGDSHTTCGGYDSQNVY 968
BLAST of mRNA_H-paniculata_contig1060.392.1 vs. uniprot
Match: D7G960_ECTSI (Glucose sorbosone dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G960_ECTSI) HSP 1 Score: 407 bits (1047), Expect = 5.390e-123 Identity = 256/657 (38.96%), Postives = 329/657 (50.08%), Query Frame = 2 Query: 518 MMMKNDFCTELVSACMGEINFPTYED--MDYCTKHTGGGKDMFWSYPYTEAAIFDSGLTEFFDEGAGIPPDALALHMSPDESVWWVCGISGQIVEISADDRLTSKLVMDM--------SEHPDLKLSKEEGLLNFAFGPSFHSNSR---FYVSFTVTSATGDH--NRLSRFDYDYDDAAATLASEEILLESTERTSTVHTAGWLGFKPSSYYSSDSSHDLYWGQGDSGNQEDPDNHGQNAMDMHGTMVRITVPTDGGGYSVPTGNYEGGMPEVCAIGIRNPWKCSFDRETEELYCGDVGQTRVETIKIIECGKNYGWGQFEGNRCQEATE-YRFGS-CADADRSDITFPWYEYCHPDYYSDGADEADFVNGVDVCGSRAVTGFAVIGGYVYRGSYFADVLYGAYVFGDAQTANIYYVRKSSDGEMTVGSIISDKSVSPVSFGEDANGELYVIDREYKIYPLPCGDLCATTCLEQSDTKPTYEPEGCFTDPASDRPLSIDAPTCDEGKDGMSPDICASFCATQAGAVYFGVEYAKECFCGTAADDIAKHGELSASSCNMLCKGFPEATCGGKNAIEVFSLGDPDPTPSPVAIVAPETETVVIAPEYSYVGCFIDNLDRVLKGTYFPELDE-----MTTMGCSILCAGSTFFGTQNGDE 2422 M MK+ FC ELV+AC G+I+FPTY+ +DYCTKHTG G + P + G + +++ D S+LV+D+ S + D EEGLL+ AFGP F NS FYVS+TV G++ NRL+RF Y DAAAT ASEE+LL + + ++VH+AGWLGFKPS+Y S DLYW GD G Q DP NH Q DG GY++P GNY G E+CAIG+RNPW+CSFDR ++LYCGDVGQ VE I IECG NYGW +FEG+RCQEA + F C RS TFP +EYCHPD+ S ADE F G D CG+R V + DG VG+IISD S+ +SF EDA+GE+ ++D + IYP+PCG+LCAT CL+Q++ P YE ICAS C T G+ + GV+ + +CFCG + D AKHG LS+ +C LC PE CGG + +EVF + DP A Y+GCF D V + FPE + MTT C+ LC+ ++ TQ G E Sbjct: 1 MTMKSAFCDELVTACDGQIDFPTYDSGTVDYCTKHTGRGGGLILVVP-----------------------------------------LRGSMRQVNLDSMDESELVIDVAGPVPSGGSFYGDF----EEGLLDVAFGPMFGDNSYPQYFYVSYTVLLDDGENQRNRLARFTYVPGDAAATRASEEVLLTTVPKYNSVHSAGWLGFKPSAY-GSPGYQDLYWTTGDGGPQTDPFNHSQ----------------DGTGYTIPPGNYHGAKAEICAIGLRNPWRCSFDRLNDDLYCGDVGQISVEEINFIECGNNYGWSRFEGSRCQEAVQDNEFNPPCDGISRSGFTFPLFEYCHPDFDSTDADEQKFTGGADTCGNRFV--------------------------------------EKDDGGWAVGTIISDASIQIISFAEDADGEIMLLDYNHNIYPMPCGNLCATICLDQAEDLPAYE-------------------------------ICASHCKT-LGSTFSGVQNSFQCFCGPSTADYAKHGSLSSDNCEYLCHAHPEDFCGGFSTMEVFRI---DPA----------------AAAGGYLGCFAD----VEEPRVFPESGKTGSNAMTTATCAGLCSDYAYYATQYGRE 502
BLAST of mRNA_H-paniculata_contig1060.392.1 vs. uniprot
Match: D7FJN8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN8_ECTSI) HSP 1 Score: 422 bits (1084), Expect = 5.130e-122 Identity = 347/1188 (29.21%), Postives = 498/1188 (41.92%), Query Frame = 2 Query: 212 AAAASLVLIGLSYLRQGAEGHPLCYFDDRPTDFEEVLTFCP-EAQDGACCNDAEEAMVEAIFEAQLPLSEECASYYKQVVCGVCHSYSAHLYEVLGRELGNDGMMMKNDFCTELVSACMGEINFPTYEDMDYCTKHTGGGKDMFWSYPYTEAAIFDS-GLTEFFDE--GAGIPPDALALHMSPDESVWWVCGISGQIVEISADDRLTSKLVMDMSEHPDLKLSKEEGLLNFAFGPSFHSNSRFYVSFTVTSATGDHNRLSRFDYDYDDAAATLASEEILLESTERTSTVHTAGWLGFKPSSYYSSDSS--HDLYWGQGDSGNQEDPDNHGQNAMDMHGTMVRITVPTD-GGGYSVPTGNY---EGGMPEVCAIGIRNPWKCSFDRETEELYCGDVGQTRVETIKIIECGKNYGWGQFEGNRCQEATEYRFG-SCADADRSDITFPWYEYCHPDYYSDGADEADFVNGVDVCGSRAVTGFAVIGGYVYRGSYFADVLYGAYVFGDAQTANIYYVRKSSDGEMTVGSIISDKSVSPVSFGEDANGELYVIDREYKIYPLPCGDLCATTCLEQSDTKPTYE-PEGCFTDPASDRPLSIDAPT-------------------------------------------CDEGKDG-------------MSPDICASFCATQAGAVYFGVEYAKECFCGTAADDIAKHGELSASSC-------NMLCKGFPEATCGGKNAIEV-----FSLG-----------DPDPTPSPVAIVAPETETVVIAPEYSYVGCFIDNLDRVLKGTYFPELDEMTTMGCSILCAGSTFFGTQNGDECLCGESDDDYDALGEGTCDTACAGDSSETCGGKFALDVYLYDDADPVPGPTPVKTPDDYEYSGCYIDDGLNRVHSGPFFKGIPTMTPEDCNERCKGSPFFATQFGDQCFCGMPGDDYAALGEGICNFDCAGDETQVCGGRDAMSVYVMKEYEPDTYS---FLGCYRDD----IPRVMSGTFKKNDPMMTLMSCAIFCEDSST-YFGLEDADECWCGDATDIPDV-YGEATCDDPCSGDESETCGGRWALSVYQFDDAPVDPRPTPIIVPESRPRKVAATYMGCWSDTSDDRMMEEALV--TDELTLELCESTCEGH--AFFGLQYGNECWCGDSDTDYMKYDAGVCTYECPGDQDELCGG 3463 A AA++ +GL+ + A HP C D P+ F FCP + +DG CCN EE+ ++A++EA + CA Y +V+CG CH +S HL+E L + M + +FC++ C ++ P DYC H G D +WSYP F + GL + F + + IP + + + M+PD S WW+ G+ GQIVE+ D ++K V+DMS + + EEGLL+ AF P+FH+ FY S+ + G NRLSRF YD + A TL SEE+L+ S+E+ S VH+AGW+GFKPSSY + + H+L+W GDSG Q D + GQ+ +HG+++RI V ++ GYS+P+GN GG E+CA G+RNP++CSFDR ++LYCGDVG VE+IK IECG NYGW QFEG+RC + E +F +C DRS TFP + +Y++ ++ G G+I D + ED +GELYV+ + I+ +PCGDLC+ + P + P P ++ P+ + P+ ++G ++P V V T A G ++ + G PE G A E + G P P P P E V + PE GT PE ++ A +T G +G LG+ C +C E CGG D PG E SG D P P + SP PG + E + + ++ +C V M E D S +LGCY DD R++ + +D M T M C FC + FGLE +C+CGD+ D YG C PC+GD+S TCGG A+ + P P + + Y+GC +D DR + E + T +T+++CE C A +GLQYG+ECWCGD D D+ ++ AG+C Y C GD CGG Sbjct: 13 ALAAAVAAVGLA--ARLASAHPNCRGDFSPS-FTVDAQFCPNDHEDGFCCNAQEESGIQAVYEAA-GATGTCADLYLEVMCGTCHPWSGHLFERL-----DTAMTLTQEFCSQFYGECATQLGLPA----DYCEVHAGPEGDQYWSYPLVIDDSFSTDGLVKAFPDLSDSSIPDEPVDMRMTPDGSKWWILGLKGQIVEVDVADPTSAKTVLDMSSL--ILWTFEEGLLSMAFSPAFHTTGVFYASYVNGPSFGT-NRLSRFKYDPNSAENTLGSEEVLIISSEKQSNVHSAGWIGFKPSSYGNDAAGAVHELFWAMGDSGPQLDTFDRGQDPNILHGSIIRIGVSSEMESGYSIPSGNPFSGGGGRGEICAQGMRNPYRCSFDRLNDDLYCGDVGHLDVESIKKIECGNNYGWRQFEGDRCMQQIEDQFPETCEFLDRSPFTFPEFN------------------------------------------------------------RLYHLFPTTGGGWGSGTIKGDDFFAVSHIAEDNDGELYVVQYQGTIFEMPCGDLCSG-----DNVNPVFPTPSPSEAPPPTEAPVVLATPSPVXXXXXXXXXXXXXXXXXXXXXXXVTTAXXXXXXXXXFTPVPLEQGDXXXXXXXXXXXXPSPVAPPXXXXXXXXXXXXVLATVAXXXXXXXXTEA---MTPGPVATAMTPAPLFVRTAAPAGMPEPEDPGTAAPEARLDEDYDYGYDRMPIRTVTEPPMPAAPPSTTELPPVEAVPVTPE----------------GTPSPEA------AVPVVPAPATCLGIPSG--------------LGQFCCSLSCG----EGCGGVGCSDK---------PGGKEGCCTHAIEESGILCADTGGEP---------PCRIPPEDETAPPPSPVVPDAXXXXXGGTEPGTEPLIPAEPLEQPPVSPEDAALCTADLGEDVVPMTGPENDEVSPPEYLGCYIDDNDELSSRILQLAYTASDSM-TPMMCEDFCRSAGADIFGLEFGHQCFCGDSRDTDLARYGTTDCHQPCAGDDSVTCGGHLAVDAFFMGGGPKVP--------------MNSDYLGCQADKQGDRALGEGFLWCTGRMTVQICEQFCRRREAAVYGLQYGHECWCGD-DMDHDQHGAGMCNYRCSGDSHTTCGG 1042 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1060.392.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1060.392.1 >prot_H-paniculata_contig1060.392.1 ID=prot_H-paniculata_contig1060.392.1|Name=mRNA_H-paniculata_contig1060.392.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1096bp MRAAAASLVLIGLSYLRQGAEGHPLCYFDDRPTDFEEVLTFCPEAQDGACback to top mRNA from alignment at H-paniculata_contig1060:9785..23186+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1060.392.1 ID=mRNA_H-paniculata_contig1060.392.1|Name=mRNA_H-paniculata_contig1060.392.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13402bp|location=Sequence derived from alignment at H-paniculata_contig1060:9785..23186+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1060:9785..23186+ >mRNA_H-paniculata_contig1060.392.1 ID=mRNA_H-paniculata_contig1060.392.1|Name=mRNA_H-paniculata_contig1060.392.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6576bp|location=Sequence derived from alignment at H-paniculata_contig1060:9785..23186+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |