Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | chloroplast |
| Exons | 2 |
| Model size | 977 |
| Cds size | 579 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10599.389.1 >prot_H-paniculata_contig10599.389.1 ID=prot_H-paniculata_contig10599.389.1|Name=mRNA_H-paniculata_contig10599.389.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=193bp
MGQWHRSAGVLSVLLLEATVGWCTAATFSAATAKQRQQGRRASAAFAPVP
HPPSFRRVLIGGGGSASSSSSLRVARPVASTAAGRRATLDNSCSSSSSSS
SGSSAGFTRLVGQRRSARMITISPPTATNLGSSDGDVRNKHQSFRRGGGL
LLRRAAGALFRRNAHLVAAPADKETLIPRVRRQASPSSWSWSL back to topmRNA from alignment at H-paniculata_contig10599:1571..5074+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig10599.389.1 ID=mRNA_H-paniculata_contig10599.389.1|Name=mRNA_H-paniculata_contig10599.389.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3504bp|location=Sequence derived from alignment at H-paniculata_contig10599:1571..5074+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGAGGACTTGTTCCCAACTTAAATAAAATACATACCAAAAATCAAAACC
GCCTCCATACAAAATATGTTAGCTAGTTCAGGACACAGACTGACTGCCTC
CCTGTCCTGACTGTGCCAACCTCAGTGCCACCCTGTGCCTCAGCACAGAA
TCTGTATCTGAGTTCTGTTGTCAAGAGTCCTTGCGGAGGTCAATCGGGAA
AAACTCTATTTTTACCCCCATCATAATTACCCCATCTGTTGGCTGCTGCC
GTCGCCACCGACTTGCTGCGTTCAGGACACGGACAAGCGGTTTGAGAAAC
GGACGGCTAGATACTCTTGTCGAAAACATCTCGACCGAAGAGAGACAAAA
AGTACAGTCAGCCCAAGTCAGCGCATTGACAAGCGCAGGACGCTAGATGG
GACAATGGCATAGATCCGCTGGGGTGCTCAGTGTGCTACTACTTGAGGCG
ACTGTGGGATGGTGCACGGCAGGTAGACTTCACTAAAGAGTGCGTGGTAG
AAATGCAAAACTTGTCGCAGCAAGAGTTGTTTTTTGTGAAATGTGTCCAT
GACCTACGATGTTGAAAGAGTCAGTTGCCGAGCTTCAGCCCAAAGTTGAT
TTGCTGTGACTGTGCTTGCTGAGTGTCTCTCGTCTGTTCCATTCGACTGC
AAATTTGAAATTCCCGAAATCCCTTCTTCGGCTATTCATCGAGTCTCTCT
CCAGGCATACGCAGTGTGACGAACATAGTGGCGGCGATGCAATCATCTGC
TGAGATACTAGATAGCTGCGGTTGCTGCATGCGCTATCATTTCTGTTCGC
CATAGTTTGTTCGCCAGTGCTGTCTCACTACAAGGTCACATGATCCCGAC
GAATTGATCCGTGGCAGCCACGTATATTCATGTGTTAATTGGCATACAAT
AAGTCGAAGAAAAACATGAGAGAGGCACACGCGTCACTTGTCCCGTCGCC
TGCTTTTATACACACCCCAACTGACACCATATTCTCTAGGGAAAAGCAGA
CTATGGTACGCTGATGCGTGCCGGCCATGCGGAATGGGGACAAATGGCGA
ACTTGTTTCAGAAAAGACAAGCGTGTATAAGAATATCTACAAGCAAGATA
GCTGTAGGTGTGACAAAAGAGAACACGTAGCGCTTGTCTACGTGAGCTTC
AACTCCGAGGTTTGAAGAGTCATATATACATTGGTTCGTCTTCAAAAGCT
GAGTCCTGTGTAGTCCTGCGCACTTTATACATAGTTGAGCTATCATAGAC
TGGGAGACTGTTATGTACGTTTGCGGCCGACTTCGGCTGCTGTTGAGATA
GCGGGGGGAAACGTGCTTGTCTGCTCTAGCCTACAGATTTTGATATCAAC
CCAGCTTCGCAGTAGATTGAACTTATTTGGCATCAATTTCTGCTTGCTTT
TTGCGATTGAGCTGTCGACTGATTGACTATTTCAATCACGCCATTACTTA
TGCCATACTGACTCCGTCTTTACGTCTGTACATTAATTATGACTCCTCAG
TGCCCCGAAGTATTTTTAGGACCACTAGTTCCTTTAGTGTTGCTCTCAGG
GGAGAAGTAGTACGTATGATGTACACCATCACAGCCTCCTTTGACCCGTT
CTCCCATTTGATGACGTATCCCCTCCACGTAATAAGCACTACATATGATG
GTTTTCATATTTTTATTCATCAGGCACAGGAAAACGTGCGTCCGATCGCT
ACTTATATTTCAAAGCTTTGGAGTTTTTGATGGAACATGTGTAAATCCTT
CACTTGCGTGTGCCTGCTTTGCAACGCGTACAGAGCCCTATGCATGTACA
AGTATGGGCAGCAGATGGCGTTTCGTTAGTGTGCCTGCTTTGCAACGCGT
ACAGAGCCCTATGCATGTACAAGTATGGGCAGCAGATGGCGTTTCGTTAG
CACATCGCACGGTGCCTTGCCGCGGAAAGTCAGGCACACCAACCAACCGT
AAATATCGTGGTACAGCCAGTCAGTGCATACCCTGAATTTTACGGTGGGG
TGGTGACATGCCAGGAACGCTGGCGTTAAGTCGAGAAATGCCTTTGTTAC
GTCTTCTGTTATATTGAAAAATTCATGGGATTTTGGTTTTGGTGATGACA
TCCAAACAGAGACGATCAAACGCGATCAAACAAAAATGACACCGGGTCTC
CCCGTGAGACAGAGGAAGCACCGAATAACACTTATAAAAGCCTTGAGCAG
AAGTCAGCGTCTGACTAGTATTTTTTTTAGCTGGATATCCAAATATTTCA
CATCTGGCTATCCCGATTGACCATGTTTAAAAAGATCAAAAGTACCATTC
GGTTAACGTTTGATAAAACAGGATTATTATCAGAATTGCCAGTTAGTCTT
CAAGTATTATTGTCCATATGGATCCGACAAAAAATAAGTAACAAGTAAAT
AATAAGAAAAAGTAATTACAGTATGGGAGAAATGATTTGCTATGGGCATC
AGCTGTTTGTTGATTCATTTGTGTGTGACGTACCGTTGCTGAGTCGTTCA
TGAATATGGTGATGAACAGGATATGATTTTTATTGACGATGCAGAGTTCA
TTGCAATCAGTGAACTATGAGGGATACAAATTAAGTGCTATATTGACAGT
TTATGAAGCTACACCGATGTGGTCAAATACTACGATTTTGAGTGCAATGT
TAAATACATATGTTACAGGGAGGCTAGTGTGCAATACAGTGAAGATTATG
GTAATGCTGAGGATAAGTTGCCACTATTTATGTAATTGACGGTTGGTGGA
TAGTCTGCATATCGTTAACATGTTATATTTCTTGTGTGAACCCACCAAAT
TCACGTTGCAATGTGCAGCTTTCAGTGTACCTGCCTTGCTTATGTTGCAG
AATGCTGGTAAACATTCGGTTTTTTTAAATATTAACACTGCTAACAGACA
AGTGTGGCCTCCCCATCCCACCCCACCCTCCTGCTCTCTATACCTGCACG
GGTTGGCTCCGCCTATCGAATAAAAAAACATATTGGGCAAAAAAAAAAAA
GCCACATTCTCGGCGGCGACGGCGAAGCAAAGACAGCAAGGGCGACGAGC
ATCTGCTGCTTTCGCACCCGTCCCTCACCCGCCGTCGTTCCGACGGGTAC
TTATCGGCGGAGGCGGGTCTGCTTCCTCTTCCTCTTCACTGCGGGTGGCA
CGTCCAGTGGCCAGCACTGCTGCTGGCAGAAGAGCGACCCTTGATAATAG
TTGTAGTAGTAGTAGTAGTAGTAGTAGTGGCAGTAGTGCTGGTTTTACTC
GTCTTGTCGGGCAAAGGAGAAGCGCGCGAATGATCACTATTTCGCCGCCG
ACAGCGACGAATCTCGGCAGCAGCGATGGGGACGTACGCAACAAGCATCA
GAGTTTCCGCCGAGGAGGCGGTCTATTGCTACGACGCGCGGCGGGCGCGC
TGTTCCGCCGAAATGCTCATCTGGTCGCGGCACCGGCGGATAAAGAGACT
TTGATCCCTCGAGTCCGCCGGCAGGCATCACCCTCTTCATGGTCGTGGTC
ATTG back to topCoding sequence (CDS) from alignment at H-paniculata_contig10599:1571..5074+ >mRNA_H-paniculata_contig10599.389.1 ID=mRNA_H-paniculata_contig10599.389.1|Name=mRNA_H-paniculata_contig10599.389.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1158bp|location=Sequence derived from alignment at H-paniculata_contig10599:1571..5074+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGACAATGGCATAGATCCGCTGGGGTGCTCAGTGTGCTACTACTTGA
GGCGACTGTGGGATGGTGCACGGCAGATGGGACAATGGCATAGATCCGCT
GGGGTGCTCAGTGTGCTACTACTTGAGGCGACTGTGGGATGGTGCACGGC
AGCCACATTCTCGGCGGCGACGGCGAAGCAAAGACAGCAAGGGCGACGAG
CATCTGCTGCTTTCGCACCCGTCCCTCACCCGCCGTCGTTCCGACGGGTA
CTTATCGGCGGAGGCGGGTCTGCTTCCTCTTCCTCTTCACTGCGGGTGGC
ACGTCCAGTGGCCAGCACTGCTGCTGGCAGAAGAGCGACCCTTGATAATA
GTTGTAGTAGTAGTAGTAGTAGTAGTAGTGGCAGTAGTGCTGGTTTTACT
CGTCTTGTCGGGCAAAGGAGAAGCGCGCGAATGATCACTATTTCGCCGCC
GACAGCGACGAATCTCGGCAGCAGCGATGGGGACGTACGCAACAAGCATC
AGAGTTTCCGCCGAGGAGGCGGTCTATTGCTACGACGCGCGGCGGGCGCG
CTGTTCCGCCGAAATGCTCATCTGGTCGCGGCACCGGCGGATAAAGAGAC
TTTGATCCCTCGAGTCCGCCGGCAGGCATCACCCTCTTCATGGTCGTGGT
CATTGCCACATTCTCGGCGGCGACGGCGAAGCAAAGACAGCAAGGGCGAC
GAGCATCTGCTGCTTTCGCACCCGTCCCTCACCCGCCGTCGTTCCGACGG
GTACTTATCGGCGGAGGCGGGTCTGCTTCCTCTTCCTCTTCACTGCGGGT
GGCACGTCCAGTGGCCAGCACTGCTGCTGGCAGAAGAGCGACCCTTGATA
ATAGTTGTAGTAGTAGTAGTAGTAGTAGTAGTGGCAGTAGTGCTGGTTTT
ACTCGTCTTGTCGGGCAAAGGAGAAGCGCGCGAATGATCACTATTTCGCC
GCCGACAGCGACGAATCTCGGCAGCAGCGATGGGGACGTACGCAACAAGC
ATCAGAGTTTCCGCCGAGGAGGCGGTCTATTGCTACGACGCGCGGCGGGC
GCGCTGTTCCGCCGAAATGCTCATCTGGTCGCGGCACCGGCGGATAAAGA
GACTTTGATCCCTCGAGTCCGCCGGCAGGCATCACCCTCTTCATGGTCGT
GGTCATTG back to top
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