mRNA_H-paniculata_contig10591.387.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_H-paniculata_contig10591.387.1 vs. uniprot
Match: D7FUH7_ECTSI (VWFA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH7_ECTSI) HSP 1 Score: 361 bits (926), Expect = 1.360e-122 Identity = 180/244 (73.77%), Postives = 203/244 (83.20%), Query Frame = 1 Query: 97 CTSEDISEVCGTADCGMIRDYRNPTVRLPESVAVGENLNPTDGNAIETICYSVLLNGPLRDLYARASAVGSNAVYFGAWTGVFRYFPGFAQDECGSYDPRIRPWYVAASSGPKDVVIVVDVSGSMGQHNRLELAKDAAVTVINTLGSDSYVNVVVFSEEARVLSPNSTALVNADAEHVSELVNLVNDLEIDLANVATNFGSAFETTFNLLDASRATTGLSSGCQTAIVFLTDGQRTVGATADEV 828
CT +I E+C DCGMIRDY NPTVRLPESVA GENLNPTD + IET+CYSVLLN PLRDLY AS VGSNAVYFGAWTGVFRYFPG AQ+ CG+YDPRIRPWYVAASSGPKDVVIV+DVSGSM Q+ RL+LAK+AA TVINTLG+DS+VNVV FSE ARVL NST LV A +++ ELV+LV +LE DLANV TNFG+AFETTF++L+ASR + SS CQTAIVFLTDG VG + DEV
Sbjct: 2 CTQYEILEICAEEDCGMIRDYDNPTVRLPESVADGENLNPTDEDVIETMCYSVLLNTPLRDLYEEASQVGSNAVYFGAWTGVFRYFPGIAQESCGTYDPRIRPWYVAASSGPKDVVIVLDVSGSMSQYGRLDLAKEAAETVINTLGADSFVNVVTFSETARVLLTNSTTLVRATEDNLGELVSLVQNLEFDLANVGTNFGAAFETTFDILEASRTSEETSSNCQTAIVFLTDGNTNVGLSTDEV 245
BLAST of mRNA_H-paniculata_contig10591.387.1 vs. uniprot
Match: A0A7S2LVH6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LVH6_9STRA) HSP 1 Score: 197 bits (500), Expect = 1.050e-55 Identity = 117/289 (40.48%), Postives = 165/289 (57.09%), Query Frame = 1 Query: 1 VLDAYNQRCLV-TQGECANLHLDACRSRLPSGECTSED--ISEVCGTAD---CGMIRDYRNPTVRLPESVAVGENLNPTDGNAIETICYSVLLNGPLRDLYARASA------VGSNAVYFGAWTGVFRYFPGFAQDECGSYDPRIRPWYVAASSGPKDVVIVVDVSGSMGQHNRLELAKDAAVTVINTLGSDSYVNVVVFSEEARVLSPNSTALVNADAEHVSELVNLVNDLEIDLANVATNFGSAFETTFNLLDASRATTGLSSGCQTAIVFLTDGQRTVGATADEVM 831
V +AY QRC + T +C+ + C S P+ +C + D + E CG C + D V +P ++A G++ NPTD IET CY++L +R Y V + YFGA G+FR PG +ECG+YDPR+RPW+VAASSGPKDVV+V+DVSGSM + R++LAK+AA+TVI TL V V+ FS+ A + P LV A E+ + L++ + L ATNF + F+ F+ L+ + +SGC AI+F+TDG RT G DEV+
Sbjct: 105 VENAYTQRCSIETLSQCSRGSFNGCSSVFPNQQCMAADELVVEACGGGSGGGCNALWDKTTSIVSIPSALAQGKDDNPTDPELIETACYTLLAEDYMRTKYENDEIFWDSYNVQPSWTYFGAHNGLFRKLPGTVDEECGNYDPRLRPWFVAASSGPKDVVLVLDVSGSMSDYGRMDLAKEAAITVIKTLTISDRVAVIAFSDYAYQVLPEDL-LVRATNENKNRLIDSIQQLT---DGGATNFHAGFQQAFDALERT-IEQEYTSGCNVAILFMTDGVRTAGPETDEVL 388
BLAST of mRNA_H-paniculata_contig10591.387.1 vs. uniprot
Match: K0TQX2_THAOC (VWFA domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TQX2_THAOC) HSP 1 Score: 180 bits (456), Expect = 2.140e-48 Identity = 115/286 (40.21%), Postives = 159/286 (55.59%), Query Frame = 1 Query: 10 AYNQRC-LVTQGECANLHLDACRSRLPSGECTSEDISEV--CGT-ADCGMIRDYRNPTVRLPESVAVGENLNPTDGNAIETICYSVLLNGPLRDLYARASA----VGSNAV--YFGAWTGVFRYFPGFAQDECGSYDPRIRPWYVAASSGPKDVVIVVDVSGSMGQHNRLELAKDAAVTVINTLGSDSYVNVVVFSEEARVLSPNSTALVNADAEHVSELVNLVNDLEIDLANVATNFGSAFETTFNLLDASRATTGLSSGCQTAIVFLTDGQRTVGATADEVMYV 837
AY++RC T C+ L +C S +G+CT+E+ + C A C + D ++ V LP + D IETICYS+L + + + R + GS YFGA G+FR P Q+ CG YDPR RPWYVAASSGPKDV++V+DVSGSMG H RL LAK+AA TVI TL ++ FS EAR + S L+ A ++ LV+ + +L A +TNFG F+ L+ + ++SGC AI+FLTDG+ T G DEV+++
Sbjct: 50 AYSRRCETATLHGCSRASLSSCSSSFSNGQCTTEEELSIPACDEGAYCSSLWDAQSSAVSLPSFL-------DQDPEVIETICYSLLAEPFMVESFERDTEWHARYGSYPSWRYFGAHDGIFRKIPAHHQEVCGEYDPRKRPWYVAASSGPKDVILVIDVSGSMGNHGRLSLAKEAATTVIETLTVADRFAIIPFSHEARFIGGPSETLLRATKDNKDRLVSEIENL---YAEGSTNFGDGLFRAFSALE-NTIQQEVTSGCNAAILFLTDGESTSGMVDDEVIHM 324
BLAST of mRNA_H-paniculata_contig10591.387.1 vs. uniprot
Match: A0A7S4NES1_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NES1_9STRA) HSP 1 Score: 164 bits (416), Expect = 8.410e-43 Identity = 105/280 (37.50%), Postives = 149/280 (53.21%), Query Frame = 1 Query: 46 CANLHLDACRSRLPSGECTSEDISEVCGTAD-----CGMIRDYRNPTVRLPESVAVGENLNPTDGNAIETICYSVLLNGPLRD----------LYARASAVGSNAVYFGAWTGVFRYFPGFAQDECGSYDPRIRPWYVAASSGPKDVVIVVDVSGSMG--QHNRLELAKDAAVTVINTLGSDSYVNVVVFSEEARVLSPNSTALVNADAEHVSELVNLVNDLEIDLANVATNFGSAFETTFNLLDASRATTGLSSGCQTAIVFLTDGQRT--VGATADEV 828
C D C S P C +++ + A+ CG + DY TVR+P+ +A G N NPTD +ET+CYS PL D Y V +YFG+ G FR FPG ECG+YDPR+RPWY+A SSGPK+VV+VVD SGSMG +++L ++AA ++ TL +++V F+ +A N + A E+ +L++ + LE AN TNF AF+ F+ LD + ++ C +AI+FLTDG T +G T D V
Sbjct: 67 CKAASYDMCSSEYPFQTCRADEQLTIPACAEGSAGKCGGLFDYTTSTVRIPKDLADGMNGNPTDKTVVETVCYS----RPLTDWMVGKYETDKTYWERLGVKEPQMYFGSHDGAFRIFPGRHSPECGTYDPRLRPWYIAGSSGPKNVVLVVDTSGSMGGGTGRKIKLLREAATLIVKTLTVADRISIVEFNTDAHSFPQNGMYV--ATEENKQKLIDGIGKLE---ANGQTNFYEAFDKAFDSLDQTARNEQVNR-CNSAILFLTDGLMTPHLGGTEDNV 336
BLAST of mRNA_H-paniculata_contig10591.387.1 vs. uniprot
Match: A0A7R9U062_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9U062_9VIRI) HSP 1 Score: 160 bits (404), Expect = 4.180e-41 Identity = 103/276 (37.32%), Postives = 156/276 (56.52%), Query Frame = 1 Query: 13 YNQRCLVTQGECANLHLDAC-RSRLPSGECTSEDIS-EVCGTADCGMIRDYRNPTVRLPES-VAVGENLNPTDGNAIETICYSVLLNGPLRDLYARASAVGSNAV-------YFGAWTGVFRYFPGFAQDECGSYDPRIRPWYVAASSGPKDVVIVVDVSGSMGQHNRLELAKDAAVTVINTLGSDSYVNVVVFSEEARVLSPNS--TALVNADAEHVSELVNLVNDLEIDLANVATNFGSAFETTFNLLDASRATTGLSSGCQTAIVFLTDGQRT 804
Y +RC ++ C + C S EC+++ I CG+ CG + D+ VR+P++ ++ G +P + ET+CY+ N + +A V + +V YFGA G+FR++P CG YDPR+RPW+ AASSGPKDVV+V+D+SGSM NR LAK AA+ V+N+L + VV+FS +A++LS +S + + A E+V N ++ LE +TNF +AF F++LD S +S C TA++FLTDG+ T
Sbjct: 32 YARRCALSANSCKEAAYEGCVTSYTDQAECSADYIKIGECGS--CGAVFDFTTSNVRIPKAYMSNGPGSSPDTPSLKETVCYT---NAITDFMVRQAEEVKAGSVFQEIPQTYFGAHNGLFRFYPARQTGVCGGYDPRVRPWFTAASSGPKDVVLVLDISGSMHFQNRWSLAKQAAIAVLNSLSIADHFGVVLFSTDAKMLSGSSRRSRMQLATEENVK---NAIDALERVTVGGSTNFLAAFRLAFDVLDHSVEQES-TSRCHTAVLFLTDGEMT 298
BLAST of mRNA_H-paniculata_contig10591.387.1 vs. uniprot
Match: A0A1Z5KJR5_FISSO (Voltage-dependent calcium channel alpha-2/delta-4 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KJR5_FISSO) HSP 1 Score: 157 bits (396), Expect = 1.850e-40 Identity = 106/274 (38.69%), Postives = 150/274 (54.74%), Query Frame = 1 Query: 43 ECANLHLDACRSRLPSGECTSEDISEV--CGTAD-CGMIRDYRNPTVRLPESVAVGENLNPTDGNAIETICYSVLLNGPLRDLYARASA------VGSNAVYFGAWTGVFRYFPGFAQDECGSYDPRIRPWYVAASSGPKDVVIVVDVSGSMGQHNRLELAKDAAVTVINTLGSDSYVNVVVFSEEARVLSPNSTALVNADAEHVSELVNLVNDLEIDLANVATNFGSAFETTFNLLDASRATTGLSSGCQTAIVFLTDGQRT--VGATADEVM 831
EC + + D C + LPS C S + CG+ + C D+ + A TD ETIC++ +N L R A + A+YFG+ TGVFRY+PG +CG+YDPR RPW VA SSGPK++V+V+D SGSM + NR+ L K AA+ VI TL + +VVF E ARV++ L A+ E + L++ + +LE A TNF AFE F++LD S+ L+ C +A++FLTDG+ T VG T + V+
Sbjct: 10 ECQSSNYDECFAALPSPTCPSGPEFNIPSCGSGEGCPGYVDFTTSVYSIAPGTA------ETDPLVYETICWTRHMNEWLIQRNERDRAFWEDLGINPGAMYFGSTTGVFRYYPGRRTKDCGTYDPRPRPWNVAPSSGPKNIVLVLDKSGSM-KENRMTLMKKAAIRVIETLTMSDRIAIVVFDETARVIADEGMYLYPANNESKAILIDAIANLE---AKGETNFYDAFEKAFDVLDISKGEE-LTVNCNSALLFLTDGEMTHPVGITPETVI 272
BLAST of mRNA_H-paniculata_contig10591.387.1 vs. uniprot
Match: B7G9V1_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G9V1_PHATC) HSP 1 Score: 150 bits (380), Expect = 3.890e-38 Identity = 101/274 (36.86%), Postives = 146/274 (53.28%), Query Frame = 1 Query: 13 YNQRCL-VTQGECANLHLDACRSRLPSGECTS-EDISEV-CGTA-DCGMIRDYRNPTVRLPESVAVGENLNPTDGNAIETICYSVLLNGPL------RDLYARASAVGSNAVYFGAWTGVFRYFPGFAQDECGSYDPRIRPWYVAASSGPKDVVIVVDVSGSMGQHNRLELAKDAAVTVINTLGSDSYVNVVVFSEEARVLSPNSTALVNADAEHVSELVNLVNDLEIDLANVATNFGSAFETTFNLLDASRATTGLSSGCQTAIVFLTDGQRT 804
Y +RC ++ +CA + C S P+ C ED++ CG C + DY RL +++ + NP+D N IETIC++ L+ + Y + + + +YFG+ G FR +P + CG YDPR+RPWY+AASSGPK+VV+V+D SGSM NRL L K AA VI TL V +V FS +A++ + ++ L A ++ L ++ A ATNF AF F +L+ S GC TAI+FLTDG+ T
Sbjct: 49 YQKRCNEISLRQCARGSYNECTSLYPNQTCPGGEDLNVAQCGDGVSCSGLWDYSISNTRLHQNLVDSADGNPSDPNVIETICFTQQLDEFFVQKRAEQKPYWDSLGLRTPQMYFGSQNGAFRIYPARQSETCGVYDPRLRPWYIAASSGPKNVVLVLDTSGSMTDGNRLSLLKQAAKQVIETLTVGDRVAIVEFSSQAKLFAQDNKFLFTATQKNKELLATHIDSFT---AAGATNFLDAFTAAFAVLNDS-IDQEYHVGCTTAILFLTDGEMT 318
BLAST of mRNA_H-paniculata_contig10591.387.1 vs. uniprot
Match: A0A1Z5KTH0_FISSO (VWFA domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KTH0_FISSO) HSP 1 Score: 144 bits (362), Expect = 1.810e-36 Identity = 96/263 (36.50%), Postives = 139/263 (52.85%), Query Frame = 1 Query: 43 ECANLHLDACRSRLPSGECTSEDISEV--CGTAD-CGMIRDYRNPTVRLPESVAVGENLNPTDGNAIETICYSVLLNGPLRDLYARASA------VGSNAVYFGAWTGVFRYFPGFAQDECGSYDPRIRPWYVAASSGPKDVVIVVDVSGSMGQHNRLELAKDAAVTVINTLGSDSYVNVVVFSEEARVLSPNSTALVNADAEHVSELVNLVNDLEIDLANVATNFGSAFETTFNLLDASRATTGLSSGCQTAIVFLTDGQRT 804
EC + D C + LP+ C S + CG+ + C D+ + A + L ETIC++ ++ L R A + A+YFG+ TGVFRY+PG CG+YDPR RPW VA SSGPK+++++ D SGSM + NR+ L K AA+ VI TL + +VV+ E A V++ L A+ E + L++ + +LE A TNF AFE F++LD S L+ C +AI+FLTDG+ T
Sbjct: 56 ECQFANFDECFAALPNPTCPSGPEFNIPSCGSGEGCPGYVDFTTSVYSIAPGTAESDPL------VYETICWTRHMDEWLIQRNERDRAFWEELGINPGAIYFGSTTGVFRYYPGRRTKNCGAYDPRPRPWGVAPSSGPKNILLLFDKSGSM-EGNRMNLMKKAAIRVIETLTMSDRIAIVVYDETASVIAKEGMYLYPANNESKAVLIDAITNLE---AQGETNFYDAFEKAFDVLDKSHGEE-LTVNCNSAILFLTDGEMT 307
BLAST of mRNA_H-paniculata_contig10591.387.1 vs. uniprot
Match: A0A6S8CFS5_9STRA (Hypothetical protein n=2 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A6S8CFS5_9STRA) HSP 1 Score: 144 bits (364), Expect = 5.770e-36 Identity = 103/282 (36.52%), Postives = 149/282 (52.84%), Query Frame = 1 Query: 4 LDAYNQRCLVTQGECANLHLDACRSRLPSGECTSEDISEVCGTADCGMIRDYRNPTVRLPESVAVGENLNPTDGNAI--ETICYSVLLNGPLRDLYARASAVGSNAV----YFGAWTGVFRYFPGFAQDECGSYDPRIRPWYVAASSGPKDVVIVVDVSGSMGQHNRLELAKDAAVTVINTLGSDSYVNVVVFSEEARVLSPNSTALVNADAEHVSELVNLVNDLEIDLANVATNFGSAFETTFNLLDASRATTGLSSGCQTAIVFLTDGQRTVGATADEVM 831
L Y RC +T C + C S+L S + D C T+D G + + +VA G P GN + E + L D + AS SNA+ Y G G+FR +PG + CG+YDPR+RPWY+AA+SGPKDVV+V+DVSGSM + RL L K+AA +V+++L V +V FSE+A + + + A+ + L + + L +A ATNF +A +TTF++ S S+ C AI+FLTDGQ T GAT + ++
Sbjct: 4 LQKYKARCSLT---CPKCFMIGCESKLTS---SVSDDKTTC-TSDYGGESSCKRQSDSRKLNVAQGAIRTPP-GNTLSDERAAHDACWTNDLDDAFISAS---SNALLRWRYIGLVDGLFRSYPGVPDESCGTYDPRLRPWYIAATSGPKDVVLVLDVSGSMTSNQRLMLVKEAAKSVLDSLSVFDRVGIVKFSEDATRIGDINQRFLVANTANKEYLKSQIEGL---VAGGATNFQAALQTTFDMFQDS-VDNEQSTNCHRAILFLTDGQPTQGATGNTLL 270
BLAST of mRNA_H-paniculata_contig10591.387.1 vs. uniprot
Match: A0A6B2L926_9EUKA (VWFA domain-containing protein (Fragment) n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L926_9EUKA) HSP 1 Score: 138 bits (347), Expect = 3.600e-35 Identity = 76/171 (44.44%), Postives = 102/171 (59.65%), Query Frame = 1 Query: 319 YFGAWTGVFRYFPGFAQDECGSYDPRIRPWYVAASSGPKDVVIVVDVSGSMGQHNRLELAKDAAVTVINTLGSDSYVNVVVFSEEARVLSPNSTALVNADAEHVSELVNLVNDLEIDLANVATNFGSAFETTFNLLDASRATTGLSSGCQTAIVFLTDGQRTVGATADEVM 831
Y G G FR +PG + C YDPR RPWY+AASSGPKDVV++VDVSGSM NRL LAK AA TV+ TL + YV +V FS V+ L+ A ++ L V+ L I+ TNF AF + F +L S+A ++SGC++ I+FLTDG+ G + ++
Sbjct: 37 YLGTPQGFFRSYPGSDRPSCTDYDPRTRPWYIAASSGPKDVVLIVDVSGSMADFNRLSLAKSAATTVLRTLTINDYVGIVKFSTGPGVVGSPRGLLLPATQANIDSLSGAVDGLSIE---GGTNFEDAFRSAFGMLSGSKAQE-MTSGCESLILFLTDGEANAGLVGEALL 203 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10591.387.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10591.387.1 >prot_H-paniculata_contig10591.387.1 ID=prot_H-paniculata_contig10591.387.1|Name=mRNA_H-paniculata_contig10591.387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=280bp VLDAYNQRCLVTQGECANLHLDACRSRLPSGECTSEDISEVCGTADCGMIback to top mRNA from alignment at H-paniculata_contig10591:763..8248- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10591.387.1 ID=mRNA_H-paniculata_contig10591.387.1|Name=mRNA_H-paniculata_contig10591.387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7486bp|location=Sequence derived from alignment at H-paniculata_contig10591:763..8248- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10591:763..8248- >mRNA_H-paniculata_contig10591.387.1 ID=mRNA_H-paniculata_contig10591.387.1|Name=mRNA_H-paniculata_contig10591.387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1680bp|location=Sequence derived from alignment at H-paniculata_contig10591:763..8248- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |