mRNA_H-paniculata_contig10585.382.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10585.382.1 vs. uniprot
Match: D7FVK8_ECTSI (Asparagine synthetase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVK8_ECTSI) HSP 1 Score: 410 bits (1055), Expect = 2.090e-136 Identity = 222/310 (71.61%), Postives = 245/310 (79.03%), Query Frame = 3 Query: 390 MRNVMNALRARVSSVGVPLDVGGKNIIAFSGGVDSSLVACLVHQVFPQNSLACIGVSAALPAAQLKLARDVANHIGIPLTEVVTGEGSDPGYIANEGQSCFHCKSHLYSSLEAVAEQAGAESR---------GEEDTSXXXXXXXXXXXXXXXXXXXKVVLFNGINKDDKRDPTRVGLKAAADFQVASPIDILTKAEVRAVSRELRLPNWNHAASPCLRSRLAFGVQATPERLAIVEKAEEVARHLLDLGVSHNLRVRAMHGEKALLEVDDGETLEKAMRALPDIRRLILPLGFGEVNVRAFRSGALSGG 1292 M+N + LRARV S+G GKNI+AFSGGVDSSLVA LVH FP++S AC+GVS+ALPAAQL LAR VAN IGIPLTE+ T EGSDP YIANEGQSCFHCK+HLYS+LEAVA QAG ESR GE TS +VVLFNG NKDDKRD TRVGLKAAADFQVASPID+LTKAEVRAV+REL LPNWNHAASPCLRSRLAFGVQATPE+L +VEKAE+ AR LDLGVSHNLRVRAMHG KALLEVD GE LE+A+R++ DIR LILPLGFGEV+VR FRSGA+SGG Sbjct: 1 MQNTIRTLRARVLSLGTSA-ADGKNIVAFSGGVDSSLVAALVHHAFPRSSQACVGVSSALPAAQLDLARSVANRIGIPLTEISTTEGSDPDYIANEGQSCFHCKTHLYSALEAVAVQAGVESRRSSAAAVGDGEPSTSALEGGGADGAGGIVEGGR-RVVLFNGTNKDDKRDTTRVGLKAAADFQVASPIDMLTKAEVRAVARELGLPNWNHAASPCLRSRLAFGVQATPEKLVLVEKAEDAARKRLDLGVSHNLRVRAMHGNKALLEVDAGEILEEALRSIEDIRSLILPLGFGEVDVRPFRSGAVSGG 308
BLAST of mRNA_H-paniculata_contig10585.382.1 vs. uniprot
Match: A0A836CNR6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNR6_9STRA) HSP 1 Score: 290 bits (741), Expect = 1.010e-89 Identity = 168/302 (55.63%), Postives = 202/302 (66.89%), Query Frame = 3 Query: 390 MRNVMNALRARVSSVGVPLDVGGKNIIAFSGGVDSSLVACLVHQVFPQNSLACIGVSAALPAAQLKLARDVANHIGIPLTEVVTGEGSDPGYIANEGQSCFHCKSHLYSSLEAVAEQAGA--ESRGEEDTSXXXXXXXXXXXXXXXXXXXKVVLFNGINKDDKRDPTRVGLKAAADFQVASPIDILTKAEVRAVSRELRLPNWNHAASPCLRSRLAFGVQATPERLAIVEKAEEVARHLLDLGVSHNLRVRAMHGEKALLEVDDGETLEKAMRALPDIRRLILPLGFGEVNVRAFRSGALSG 1289 MR+++ L+ R+ + G + G N++AFSGGVDSS+VA LVH+VFP NSLAC+GVS +LPAAQ +LA +A+ IGI L EVVT EGSDP YIAN GQSC+HCKSHLYS+LEA+A A A SR D + VLFNG N++D+ D TRVGLKAAA++ V+SPID LTKA+VRAV+R L LPNW+HAASPCLRSRLAFGV ATP LA VE+AE AR LL LG NLRVRAM E+AL+EVD L +VRAFRSGA+SG Sbjct: 1 MRSLIRTLQRRIEAEGT---LRGHNLVAFSGGVDSSVVAALVHEVFPSNSLACLGVSPSLPAAQRELAHTIADRIGIGLREVVTQEGSDPEYIANRGQSCYHCKSHLYSALEAIAADATAAVHSRNGGDGDS------------------RNVLFNGTNQEDRSDTTRVGLKAAAEYSVSSPIDTLTKAQVRAVARALALPNWDHAASPCLRSRLAFGVAATPASLARVERAEAAARALLALGPRDNLRVRAMAAERALVEVDAAR-LXXXXXXXXXXXXXXXXXXXXXXDVRAFRSGAVSG 280
BLAST of mRNA_H-paniculata_contig10585.382.1 vs. uniprot
Match: A0A6V1PUF6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PUF6_HETAK) HSP 1 Score: 280 bits (716), Expect = 2.130e-86 Identity = 162/297 (54.55%), Postives = 195/297 (65.66%), Query Frame = 3 Query: 399 VMNALRARVSSVGVPLDVGGKNIIAFSGGVDSSLVACLVHQVFPQNSLACIGVSAALPAAQLKLARDVANHIGIPLTEVVTGEGSDPGYIANEGQSCFHCKSHLYSSLEAVAEQAGAESRGEEDTSXXXXXXXXXXXXXXXXXXXKVVLFNGINKDDKRDPTRVGLKAAADFQVASPIDILTKAEVRAVSRELRLPNWNHAASPCLRSRLAFGVQATPERLAIVEKAEEVARHLLDLGVSHNLRVRAMHGEKALLEVDDGETLEKAMRALPDIRRLILPLGFGEVNVRAFRSGALSG 1289 +++ L ARVS++G G NIIAFSGGVDSSL A LVH+VFPQNS ACIG+SAALP QL LAR+VA+ IGI L EV T EG D YIAN+G++C+HCK+HLYSSL AVAE A A+ KV+LFNG NKDD RD TR+GLKAA +F+VASP+ +TK EVR ++ L LPNW HAASPCLRSRLAFGV AT E L ++KAE + R L LG NLRVRA + +A + VD LE P I IL LGF V+ RA+R+G +SG Sbjct: 7 IIDLLLARVSNLGTRR---GSNIIAFSGGVDSSLSAALVHKVFPQNSSACIGISAALPQDQLILAREVASSIGIHLQEVRTNEGYDADYIANKGKACYHCKTHLYSSLMAVAELAAAKGN-----------------IIGTDGKEKVILFNGTNKDDLRDDTRIGLKAAENFKVASPLAEITKDEVRLAAKALGLPNWQHAASPCLRSRLAFGVAATKENLERIDKAEAIVRRHLGLGPEVNLRVRAANPTRAAVAVDQS-LLEAVATHFPRIEEKILALGFKNVSFRAYRTGMMSG 282
BLAST of mRNA_H-paniculata_contig10585.382.1 vs. uniprot
Match: A0A024U4X0_9STRA (NAD_synthase domain-containing protein n=6 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U4X0_9STRA) HSP 1 Score: 264 bits (675), Expect = 1.660e-80 Identity = 149/297 (50.17%), Postives = 190/297 (63.97%), Query Frame = 3 Query: 399 VMNALRARVSSVGVPLDVGGKNIIAFSGGVDSSLVACLVHQVFPQNSLACIGVSAALPAAQLKLARDVANHIGIPLTEVVTGEGSDPGYIANEGQSCFHCKSHLYSSLEAVAEQAGAESRGEEDTSXXXXXXXXXXXXXXXXXXXKVVLFNGINKDDKRDPTRVGLKAAADFQVASPIDILTKAEVRAVSRELRLPNWNHAASPCLRSRLAFGVQATPERLAIVEKAEEVARHLLDLGVSHNLRVRAMHGEKALLEVDDGETLEKAMRALPDIRRLILPLGFGEVNVRAFRSGALSG 1289 ++ L ARV G V N++A+SGGVDSSLVA LVH+VFP+NS+AC+GVSAAL QL LARDVA IGIPL E T EG DP Y+ N+GQSC++CK++LY++L VAE+ A+S G VLFNG N DDK DPTR+GL AA +FQV SP++ LTKA VR +S+++ LPNWN+AASPCLRSRLAFGV A P+ LA +EKAE R + L NLRVR + +A +E+D R + I+ + LGF + VR F+SG+LSG Sbjct: 2 LLENLLARVRHAGSSKHV---NVVAYSGGVDSSLVAALVHRVFPENSIACLGVSAALSQDQLTLARDVATAIGIPLWETRTSEGEDPRYVENKGQSCYYCKTNLYTTLSQVAERVKAQSPG-----------------------VAPVLFNGTNADDKFDPTRLGLVAATEFQVVSPLENLTKASVRQISKQIGLPNWNYAASPCLRSRLAFGVAANPDHLARIEKAEHAVRSTVALTPVDNLRVRFLAHNRAAVELDAATVRALLPRQVDAIQVICKELGFDDAIVRPFKSGSLSG 272
BLAST of mRNA_H-paniculata_contig10585.382.1 vs. uniprot
Match: A0A7S2W2V8_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W2V8_9STRA) HSP 1 Score: 265 bits (677), Expect = 2.270e-80 Identity = 149/270 (55.19%), Postives = 177/270 (65.56%), Query Frame = 3 Query: 456 GKNIIAFSGGVDSSLVACLVHQVFPQNSLACIGVSAALPAAQLKLARDVANHIGIPLTEVVTGEGSDPGYIANEGQSCFHCKSHLYSSLEAVAEQAGAESRGEEDTSXXXXXXXXXXXXXXXXXXXKVVLFNGINKDDKRDPTRVGLKAAADFQVASPIDILTKAEVRAVSRELRLPNWNHAASPCLRSRLAFGVQATPERLAIVEKAEEVARHLLDLGVSHNLRVRAMHGEKALLEVDDGETLEKAMRALPDIRRL-ILPLGFGEVNVR 1262 GKNI+AFSGGVDSSLVA LVH+V P +SLAC G+SA+LP AQL LAR VA HIGI + EV T EGS P Y+ANEG +C+HCKS LY++L AVA A G T VVL+NG N DD+RDPTRVGL+AA FQVASP+ L+K EVR ++ L LPNWNHAASPCLRSRLA GV AT E L +E AE R ++ V HNLRVR + +KA++EVD E LE D +R +L LGF +V VR Sbjct: 21 GKNIVAFSGGVDSSLVAALVHRVAPASSLACTGISASLPEAQLDLARHVAEHIGIQMREVPTSEGSHPEYLANEGMACYHCKSELYTALGAVARFASGVGTGGPATP--------------------VVLYNGTNADDQRDPTRVGLRAAEHFQVASPVSHLSKDEVRQAAKHLGLPNWNHAASPCLRSRLALGVSATDETLRRIESAERFVRSIVPFDVHHNLRVRLLAKQKAVVEVDS-EKLELTEGLFDDTKRTELLSLGFAKVEVR 269
BLAST of mRNA_H-paniculata_contig10585.382.1 vs. uniprot
Match: A0A485LSD2_9STRA (Aste57867_23475 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSD2_9STRA) HSP 1 Score: 262 bits (670), Expect = 9.150e-80 Identity = 144/280 (51.43%), Postives = 184/280 (65.71%), Query Frame = 3 Query: 462 NIIAFSGGVDSSLVACLVHQVFPQNSLACIGVSAALPAAQLKLARDVANHIGIPLTEVVTGEGSDPGYIANEGQSCFHCKSHLYSSLEAVAEQAGAESRGEEDTSXXXXXXXXXXXXXXXXXXXKVVLFNGINKDDKRDPTRVGLKAAADFQVASPIDILTKAEVRAVSRELRLPNWNHAASPCLRSRLAFGVQATPERLAIVEKAEEVARHLLDLGVSHNLRVRAMHGEKALLEVDDGETLEKAMRALP----DIRRLILPLGFGEVNVRAFRSGALSG 1289 N++A+SGGVDSSLVA +VH+VFP NS+AC+GVSAALPA QL +AR VA HIGIPL E T EG+DP Y+ N+G+SC++CK++LY++L V + E K +LFNG N DDK DPTR+GL AA++F V SP++ L K VR +S+EL LPNWN+AASPCLRSRLAFGV AT + LA +EKAEE R L L + NLRVR + G +A +EVD L+K LP ++ GF V+VRAF+SG+LSG Sbjct: 19 NVVAYSGGVDSSLVAAIVHRVFPDNSIACLGVSAALPAEQLLVARGVAQHIGIPLWETPTTEGNDPRYVENKGKSCYYCKTNLYTTLNQVVSHIKTQMPAE----------------------AKPILFNGTNADDKLDPTRLGLVAASEFHVVSPLEALAKTSVRELSKELGLPNWNYAASPCLRSRLAFGVAATRDHLARIEKAEETVRSHLALTRADNLRVRFLAGNRAAIEVD----LKKLESLLPTDIHSVQEACEKFGFAAVDVRAFKSGSLSG 272
BLAST of mRNA_H-paniculata_contig10585.382.1 vs. uniprot
Match: A0A4D9D8U2_9STRA (Asparagine synthetase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D8U2_9STRA) HSP 1 Score: 262 bits (669), Expect = 2.100e-78 Identity = 154/300 (51.33%), Postives = 185/300 (61.67%), Query Frame = 3 Query: 456 GKNIIAFSGGVDSSLVACLVHQVFPQNSLACIGVSAALPAAQLKLARDVANHIGIPLTEVVTGEGSDPGYIANEGQSCFHCKSHLYSSLEAVAEQAGAESRGEEDTSXXXXXXXXXXXXXXXXXXXK--------VVLFNGINKDDKRDPTRVGLKAAADFQVASPIDILTKAEVRAVSRELRLPNWNHAASPCLRSRLAFGVQATPERLAIVEKAEEVARHLLD--------------LGVSHNLRVRAMHGEKALLEVDDGETLEKAMRALPDIR-RLILPLGFGEVNVRAFRSGALS 1286 G N+IA+SGGVDSSLVA LV QVFP NS+ACIG+SA+LP QL LAR VA HIGIPL E+ T EG+ P Y+AN G SCFHCK+HLY++L+AVA G G ++ V LFNG N DD+RDPTRVGLKAA F+V SPID LTK EVR +++ + LPNW HAASPCLRSRLAFGV A L VE AE + + L LGV HN+RVR M KA++E+D E LE A L R LGF EV++RAF+SG++S Sbjct: 35 GTNLIAYSGGVDSSLVAALVRQVFPSNSVACIGLSASLPDNQLTLARQVAAHIGIPLREIPTYEGAAPEYVANRGMSCFHCKTHLYTALQAVAAVVGTHMNGPLSSNFLHSTQGGSTETLQHVKMNGADASAPSVVALFNGTNADDRRDPTRVGLKAATKFKVRSPIDHLTKEEVRLLAKAMNLPNWQHAASPCLRSRLAFGVPALEAHLRRVETAERIVKATLGGKFDDKEGEGGLSKLGVHHNVRVRLMARGKAMIELDV-ELLESAASYLSTFEGRFKKELGFTEVSLRAFKSGSVS 333
BLAST of mRNA_H-paniculata_contig10585.382.1 vs. uniprot
Match: A0A6G0W843_9STRA (Asparagine synthetase domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W843_9STRA) HSP 1 Score: 251 bits (641), Expect = 2.050e-75 Identity = 135/276 (48.91%), Postives = 181/276 (65.58%), Query Frame = 3 Query: 462 NIIAFSGGVDSSLVACLVHQVFPQNSLACIGVSAALPAAQLKLARDVANHIGIPLTEVVTGEGSDPGYIANEGQSCFHCKSHLYSSLEAVAEQAGAESRGEEDTSXXXXXXXXXXXXXXXXXXXKVVLFNGINKDDKRDPTRVGLKAAADFQVASPIDILTKAEVRAVSRELRLPNWNHAASPCLRSRLAFGVQATPERLAIVEKAEEVARHLLDLGVSHNLRVRAMHGEKALLEVDDGETLEKAMRALPDIRRLILPLGFGEVNVRAFRSGALSG 1289 N++AFSGGVDSSLVA +VH+ FP+NS+AC+GVSAA+PA QL LAR++A +IGIPL E T EG DP Y+ N GQSC++CK++LY++L VA +S E T +L+NG N DDK DPTR+GL AA +F+V SP++ LTKAEVR S+EL LPNWN+AASPCLRSRLAFGV AT E L+ +E+AE R ++ L S N+RVR + +A +E+D + + + +GF + VR F+SG++SG Sbjct: 19 NVVAFSGGVDSSLVAAVVHKTFPENSIACLGVSAAVPADQLDLAREIARYIGIPLWETPTSEGQDPRYVENIGQSCYYCKTNLYTTLNQVASHV--KSNIPEGTVP--------------------ILYNGTNSDDKLDPTRLGLIAANEFRVVSPLEDLTKAEVRQASKELGLPNWNYAASPCLRSRLAFGVSATKEHLSRIERAERAIRSMMALKPSDNMRVRFLAQNRAAVELDASRQQSLLPEEVQAAQEICKQIGFVDAIVRPFKSGSVSG 272
BLAST of mRNA_H-paniculata_contig10585.382.1 vs. uniprot
Match: A0A225W4A0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W4A0_9STRA) HSP 1 Score: 250 bits (639), Expect = 9.800e-75 Identity = 145/277 (52.35%), Postives = 181/277 (65.34%), Query Frame = 3 Query: 462 NIIAFSGGVDSSLVACLVHQVFPQNSLACIGVSAALPAAQLKLARDVANHIGIPLTEVVTGEGSDPGYIANEGQSCFHCKSHLYSSLEAVAEQAGAE-SRGEEDTSXXXXXXXXXXXXXXXXXXXKVVLFNGINKDDKRDPTRVGLKAAADFQVASPIDILTKAEVRAVSRELRLPNWNHAASPCLRSRLAFGVQATPERLAIVEKAEEVARHLLDLGVSHNLRVRAMHGEKALLEVDDGETLEKAMRALPDIRRLILPLGFGEVNVRAFRSGALSG 1289 N++AFSGGVDSSL A LV QVFP S ACIG SAAL + QL+ ARDVA HIG+PL E T E GY++N+G+SC++CK+ LYS+L VAE A E + + DT K VL+NG N DD+ DPTRVGL AA++F V SP+ LTK EVR V++ L LPNWN AASPCLRSRL FGV+AT + L VEKAE R L+ L ++RVR + G KA +E+D + LEKA+ I + LGF V++RAFRSG+LSG Sbjct: 32 NVVAFSGGVDSSLAAALVFQVFPHTSAACIGRSAALSSVQLQQARDVATHIGVPLWECRTEEAKLEGYVSNKGKSCYYCKTTLYSTLNQVAEFAWNELQQVQGDTDKM-----------------KPVLYNGTNADDQLDPTRVGLVAASEFDVVSPLSGLTKQEVRDVAKYLGLPNWNAAASPCLRSRLQFGVEATQQHLHRVEKAEAFVRELIRLEPQMSMRVRFLAGNKAAVELDK-DALEKALHQFDIINEELRRLGFNAVDIRAFRSGSLSG 290
BLAST of mRNA_H-paniculata_contig10585.382.1 vs. uniprot
Match: D0NJX4_PHYIT (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=D0NJX4_PHYIT) HSP 1 Score: 249 bits (636), Expect = 2.400e-74 Identity = 146/278 (52.52%), Postives = 182/278 (65.47%), Query Frame = 3 Query: 462 NIIAFSGGVDSSLVACLVHQVFPQNSLACIGVSAALPAAQLKLARDVANHIGIPLTEVVTGEGSDPGYIANEGQSCFHCKSHLYSSLEAVAEQAGAESR--GEEDTSXXXXXXXXXXXXXXXXXXXKVVLFNGINKDDKRDPTRVGLKAAADFQVASPIDILTKAEVRAVSRELRLPNWNHAASPCLRSRLAFGVQATPERLAIVEKAEEVARHLLDLGVSHNLRVRAMHGEKALLEVDDGETLEKAMRALPDIRRLILPLGFGEVNVRAFRSGALSG 1289 N++AFSGGVDSSL A LV QVFP ACIG SAAL + QL+ AR+VA+HIG+PL E T E GY+AN+G+SC++CK+ LYS+L VAE A E + GEE K VL+NG N DD+ D TRVGL AA +F+V SP+ LTK EVR V++ L LPNWN AASPCLRSRL FGV+AT + L VEKAEE R L+ L ++RVR + G KA +E+D E LEKA+ I + LGF +V++RAFRSG+LSG Sbjct: 32 NVVAFSGGVDSSLAAALVFQVFPDTGAACIGRSAALSSVQLRQAREVASHIGVPLWECHTDEAKLEGYVANQGKSCYYCKTTLYSTLNQVAEFAWQEMQQHGEE---------------------IKPVLYNGTNADDQLDLTRVGLVAATEFEVVSPLSGLTKQEVRDVAKYLGLPNWNAAASPCLRSRLQFGVEATQQHLHRVEKAEEFVRELVHLEPQMSMRVRFLAGNKAAVELDT-EGLEKAIPHFDVIDAELRRLGFNDVDIRAFRSGSLSG 287 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10585.382.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10585.382.1 >prot_H-paniculata_contig10585.382.1 ID=prot_H-paniculata_contig10585.382.1|Name=mRNA_H-paniculata_contig10585.382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=332bp MRNVMNALRARVSSVGVPLDVGGKNIIAFSGGVDSSLVACLVHQVFPQNSback to top mRNA from alignment at H-paniculata_contig10585:253..5939- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10585.382.1 ID=mRNA_H-paniculata_contig10585.382.1|Name=mRNA_H-paniculata_contig10585.382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5687bp|location=Sequence derived from alignment at H-paniculata_contig10585:253..5939- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10585:253..5939- >mRNA_H-paniculata_contig10585.382.1 ID=mRNA_H-paniculata_contig10585.382.1|Name=mRNA_H-paniculata_contig10585.382.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1992bp|location=Sequence derived from alignment at H-paniculata_contig10585:253..5939- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |