mRNA_H-paniculata_contig1057.373.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1057.373.1
Unique NamemRNA_H-paniculata_contig1057.373.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: D7FHF8_ECTSI (Ribonuclease HI n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHF8_ECTSI)

HSP 1 Score: 164 bits (416), Expect = 1.300e-42
Identity = 127/319 (39.81%), Postives = 161/319 (50.47%), Query Frame = 3 
Query:   48 MASELTRTAIHAMRVKELRSELEIRDLDCTGLRPVLQARLLED--------LANRSSRR-RPTTLSEQHANGTKDDTLDKNRPSQQQRESHTLGAAVELAERPLTLRFLPEDAETGDEGGSTARSSGIDGGSLASPARQNAGLPFASLQPLRPFPGELLKDRFVLQFDGGSKGNPGNSGAGAVIYRLD-GGERKEVFCGFYWVGPEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQ------------------VKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELANKAMTSRQTS 920
            M + ++RTAI  MRV ELR EL  R LD TG+RPVLQ RL+E         + +RS +R R  T     A GT   T     P++ Q        A   A R  + R   +  + G    ST                                PG       +LQFDGGS+GNPG SG GAV+YRLD  GER+EV+    W+G + TNNEAEY  LIEGL AA++LGI+ + VEGDS LVI+QMLG Y+                  V SPKM P + EA  + +AFD+   + HI R  N RAD+LAN AM +  +S
Sbjct:   64 MGAAISRTAIAKMRVAELREELASRGLDNTGIRPVLQGRLIEAKETEWAQAVIDRSRQRERSNTTEPPRAAGT---TAPPG-PARSQ-------VATSQAARTPSPRIRQQQQQRGISTSSTK-------------------------------PGRQRSTTHLLQFDGGSRGNPGPSGCGAVLYRLDESGEREEVWSSSVWIGEKRTNNEAEYRGLIEGLIAAEKLGIKRLSVEGDSKLVIQQMLGNYKGKQGKTERGGVGGGRGGGVTSPKMQPLFREATTISKAFDA-LELGHIMRAHNERADDLANIAMDTETSS 339
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BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: A0A7S2KCF7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF7_9STRA)

HSP 1 Score: 139 bits (350), Expect = 1.810e-35
Identity = 70/143 (48.95%), Postives = 103/143 (72.03%), Query Frame = 3 
Query:  507 FVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVGPEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELANKAMTSRQTSRYAVS 935
            +VLQFDGGS+GNPG +GAG V+Y   G    EV+ G +++G  +TNNEAEY  L+ GL+ A+ +G+ NI+V+GDS L+++Q+ G+Y+ KS K+ P +   ++L++ F+S F +RHIPRE N RADELAN+AM  R+     V+
Sbjct:   11 YVLQFDGGSRGNPGTAGAGMVLYDEVG---HEVWHGRHYLGEHSTNNEAEYTGLLAGLKCARAIGVSNIVVQGDSELIVKQLQGKYKCKSSKLIPYFTSVKSLIKGFNS-FEVRHIPREQNFRADELANEAMDWRENDYLGVN 149
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BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: A0A6T8JIG0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A6T8JIG0_9STRA)

HSP 1 Score: 135 bits (339), Expect = 1.990e-33
Identity = 75/134 (55.97%), Postives = 96/134 (71.64%), Query Frame = 3 
Query:  507 FVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVGPEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELANKAMTS 908
            + LQFDGGS+GNPG SGAG VIY     + +EV+ G Y +  EATNNEAEY AL++GL+ A+ LGIR++ V+GDSNL++ Q+ G Y+VKS  + P   +A  L  AF S+F + HIPRE N RADELAN AM S
Sbjct:   37 YNLQFDGGSRGNPGLSGAGMVIYN---DKSQEVWNGSYLLPKEATNNEAEYTALVKGLQHARRLGIRHLAVQGDSNLIVMQITGRYKVKSQHLKPFHRDAVELRSAF-STFEISHIPREENGRADELANIAMDS 166
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BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: A0A6C0FCH9_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0FCH9_9ZZZZ)

HSP 1 Score: 123 bits (309), Expect = 7.080e-30
Identity = 68/136 (50.00%), Postives = 90/136 (66.18%), Query Frame = 3 
Query:  495 LKDRFVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVGPEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELANKAM 902
            +   ++L FDG SKGNPG SGAGAVI+R D    KE++   ++VG   TNN AEY  LI GL  A +  +  ++V+GDSNLVIRQM GE+QVKSPK+ P + EA+ L +    +    H+ R+ N RADELAN A+
Sbjct:    1 MTSNYILFFDGCSKGNPGESGAGAVIFRDD----KEIYTESFFVGDRETNNVAEYTGLIMGLSYAVDNNMDTLVVKGDSNLVIRQMKGEFQVKSPKLMPYYQEARKLSDKI-KNIRYEHVYRDNNKRADELANNAL 131
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BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: A0A7S2I3Y3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2I3Y3_9STRA)

HSP 1 Score: 125 bits (315), Expect = 8.410e-30
Identity = 68/138 (49.28%), Postives = 96/138 (69.57%), Query Frame = 3 
Query:  507 FVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVGPEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELANKAMTSRQTS 920
            FVL+FDGGS+GNPG +G+G V+Y  D  E  EV+ G  ++G ++TNN AEY  L+ G++ A  LG R+I+ +GDS LV+ Q+ GE++VK+  + P + E   L   F+S F + HIPRE NSRAD LANKAM  R+++
Sbjct:   72 FVLRFDGGSRGNPGVAGSGMVLY--DAEEGAEVWSGQKYLGEDSTNNVAEYTGLLTGMKCAYALGARHIVAQGDSLLVVNQLNGEWKVKNQGLKPIFQEVMKLRGQFES-FQINHIPREENSRADRLANKAMDDRKST 206
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BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: A0A4D9D4W7_9STRA (RNase H type-1 domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D4W7_9STRA)

HSP 1 Score: 127 bits (320), Expect = 3.290e-28
Identity = 75/161 (46.58%), Postives = 102/161 (63.35%), Query Frame = 3 
Query:  426 PARQNAGLPFASLQPLRPFPGELLKDRFVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVG--PEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELANKAM 902
            PAR +       ++P+ P      +  ++L+FDGGS+GNPG  GAG VIY        +V     W+G  P  TNNEAEY  L+ GLRAAK+LGIR I VEGDS LV+RQ+LG Y+V++ ++   + EA AL E F + F++RH+ R  NS AD LAN+A+
Sbjct:  312 PARSHVSKVGTGMRPMSPIINPTAQ--YLLRFDGGSRGNPGPGGAGIVIYEQ--ASLVQVRGLSLWLGSDPPLTNNEAEYHGLVAGLRAAKKLGIRRICVEGDSQLVVRQILGVYKVRNERLRVLYSEAMALKENF-AEFSIRHVERSQNSDADALANRAL 467
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BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: A0A6C0DKZ1_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DKZ1_9ZZZZ)

HSP 1 Score: 119 bits (297), Expect = 6.410e-28
Identity = 66/129 (51.16%), Postives = 88/129 (68.22%), Query Frame = 3 
Query:  507 FVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVGPEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELAN 893
            + L+FDG SKGNPG +GAGAVIY+ D    +E++    +VG + TNN AEY  LI GL  A ELGI+ ++V GDS L+I+QM GEY+VKS  +   +L+A+ L   FD+     HI R+ N+RADELAN
Sbjct:   28 YCLKFDGCSKGNPGPAGAGAVIYKND----QEIWANSKYVGDKETNNVAEYHGLIMGLSRANELGIKELLVMGDSELIIKQMKGEYKVKSVNIIEHYLKAKTLSRLFDN-IKYEHIYRKDNTRADELAN 151
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BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: A0A6C0DSN1_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0DSN1_9ZZZZ)

HSP 1 Score: 119 bits (297), Expect = 6.600e-28
Identity = 68/138 (49.28%), Postives = 92/138 (66.67%), Query Frame = 3 
Query:  507 FVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVGPEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELANKAMTSRQTS 920
            + L+FDG SKGNPG +GAGAVIY+ D    +E++    +VG + TNN AEY  LI GL  A ELGI+ ++V GDS L+I+QM GEY+VKS  +   +L+A+ L   F S     HI R+ N+RADELAN  + S+ +S
Sbjct:   27 YCLKFDGCSKGNPGPAGAGAVIYKND----EEIWANSVYVGDKETNNVAEYNGLIMGLTKANELGIKELLVMGDSELIIKQMKGEYKVKSVNIIEYYLKAKTL-SRFLSEVHYEHIYRKDNTRADELANFGLQSKLSS 159
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BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: A0A6C0ESY5_9ZZZZ (RNase H type-1 domain-containing protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0ESY5_9ZZZZ)

HSP 1 Score: 114 bits (284), Expect = 4.360e-26
Identity = 70/136 (51.47%), Postives = 84/136 (61.76%), Query Frame = 3 
Query:  495 LKDRFVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVGPEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELANKAM 902
            +   F LQFDG SKGNPG SGAGAVIY  D    +E++    +VG   TNN AEY  LI GL+ A EL I+ I+VEGDS LVI+QM G+Y+V S  +     EA  L E FDS     HI R  N RAD L+N A+
Sbjct:   25 ISSGFRLQFDGCSKGNPGISGAGAVIYNFD----EEIWWDSLFVGENTTNNYAEYSGLILGLKKAIELDIKEIIVEGDSTLVIKQMKGDYKVYSENLQDLHREALKLCENFDS-IQFTHIYRINNKRADYLSNLAI 155
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BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Match: A0A7S2ULA3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULA3_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.030e-25
Identity = 63/142 (44.37%), Postives = 94/142 (66.20%), Query Frame = 3 
Query:  507 FVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVGPEATNNEAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKWLEAQALVEAFDSSFAMRHIPREMNSRADELANKAMTSRQTSRYAV 932
            +V++FDGGS+GNPG +G G V+Y  D G   EV+ G  ++   ATNNEAEY+ L+ GL+ A+ +G+ NI+V+GDS L++ Q+ G+Y+VKS  + P +     L   F S F + HI R+ N RADELAN+AM  + +  + +
Sbjct:   78 YVMRFDGGSRGNPGIAGCGMVLYDADTG--MEVWTGRQYLET-ATNNEAEYKGLLLGLQCARSMGVENIVVQGDSQLIVYQIEGKYKVKSKNLIPLFRAVMDLKRQF-SFFEIGHIYRDKNGRADELANEAMDHKTSMGFEI 215
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1057.373.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHF8_ECTSI1.300e-4239.81Ribonuclease HI n=2 Tax=Ectocarpus TaxID=2879 RepI... [more]
A0A7S2KCF7_9STRA1.810e-3548.95Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A6T8JIG0_9STRA1.990e-3355.97Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
A0A6C0FCH9_9ZZZZ7.080e-3050.00RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A7S2I3Y3_9STRA8.410e-3049.28Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A4D9D4W7_9STRA3.290e-2846.58RNase H type-1 domain-containing protein n=3 Tax=M... [more]
A0A6C0DKZ1_9ZZZZ6.410e-2851.16RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A6C0DSN1_9ZZZZ6.600e-2849.28RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A6C0ESY5_9ZZZZ4.360e-2651.47RNase H type-1 domain-containing protein n=1 Tax=v... [more]
A0A7S2ULA3_9STRA1.030e-2544.37Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1057contigH-paniculata_contig1057:22405..27310 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score168.3
Seed ortholog evalue5.4e-39
Seed eggNOG ortholog2880.D7FHF8
Hectar predicted targeting categoryother localisation
EggNOG free text desc.RNase H
EggNOG OGs2S89Z@2759,COG0328@1
Ec32 ortholog descriptionRibonuclease H-like domain
Ec32 orthologEc-25_002560.1
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1530
Cds size891
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928759.794746-UTR-H-paniculata_contig1057:22404..229961622928759.794746-UTR-H-paniculata_contig1057:22404..22996Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1057 22405..22996 -
1691480608.9022849-UTR-H-paniculata_contig1057:22404..229961691480608.9022849-UTR-H-paniculata_contig1057:22404..22996Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1057 22405..22996 -
1622928759.8908193-UTR-H-paniculata_contig1057:27263..273101622928759.8908193-UTR-H-paniculata_contig1057:27263..27310Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1057 27264..27310 -
1691480608.9604375-UTR-H-paniculata_contig1057:27263..273101691480608.9604375-UTR-H-paniculata_contig1057:27263..27310Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1057 27264..27310 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928759.814986-CDS-H-paniculata_contig1057:22996..231671622928759.814986-CDS-H-paniculata_contig1057:22996..23167Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1057 22997..23167 -
1691480608.91331-CDS-H-paniculata_contig1057:22996..231671691480608.91331-CDS-H-paniculata_contig1057:22996..23167Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1057 22997..23167 -
1622928759.8295376-CDS-H-paniculata_contig1057:24175..242351622928759.8295376-CDS-H-paniculata_contig1057:24175..24235Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1057 24176..24235 -
1691480608.9235678-CDS-H-paniculata_contig1057:24175..242351691480608.9235678-CDS-H-paniculata_contig1057:24175..24235Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1057 24176..24235 -
1622928759.8466177-CDS-H-paniculata_contig1057:24905..250351622928759.8466177-CDS-H-paniculata_contig1057:24905..25035Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1057 24906..25035 -
1691480608.9360974-CDS-H-paniculata_contig1057:24905..250351691480608.9360974-CDS-H-paniculata_contig1057:24905..25035Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1057 24906..25035 -
1622928759.8616467-CDS-H-paniculata_contig1057:25734..261371622928759.8616467-CDS-H-paniculata_contig1057:25734..26137Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1057 25735..26137 -
1691480608.944362-CDS-H-paniculata_contig1057:25734..261371691480608.944362-CDS-H-paniculata_contig1057:25734..26137Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1057 25735..26137 -
1622928759.8782194-CDS-H-paniculata_contig1057:27136..272631622928759.8782194-CDS-H-paniculata_contig1057:27136..27263Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1057 27137..27263 -
1691480608.9524894-CDS-H-paniculata_contig1057:27136..272631691480608.9524894-CDS-H-paniculata_contig1057:27136..27263Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1057 27137..27263 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1057.373.1prot_H-paniculata_contig1057.373.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1057 22997..27263 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1057.373.1

>prot_H-paniculata_contig1057.373.1 ID=prot_H-paniculata_contig1057.373.1|Name=mRNA_H-paniculata_contig1057.373.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=297bp
MASELTRTAIHAMRVKELRSELEIRDLDCTGLRPVLQARLLEDLANRSSR
RRPTTLSEQHANGTKDDTLDKNRPSQQQRESHTLGAAVELAERPLTLRFL
PEDAETGDEGGSTARSSGIDGGSLASPARQNAGLPFASLQPLRPFPGELL
KDRFVLQFDGGSKGNPGNSGAGAVIYRLDGGERKEVFCGFYWVGPEATNN
EAEYEALIEGLRAAKELGIRNIMVEGDSNLVIRQMLGEYQVKSPKMGPKW
LEAQALVEAFDSSFAMRHIPREMNSRADELANKAMTSRQTSRYAVS*
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mRNA from alignment at H-paniculata_contig1057:22405..27310-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1057.373.1 ID=mRNA_H-paniculata_contig1057.373.1|Name=mRNA_H-paniculata_contig1057.373.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4906bp|location=Sequence derived from alignment at H-paniculata_contig1057:22405..27310- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGTCGCGGGGCGCGCGTAGGGCACTGTCGCCACAGGGTAGTCTTTGCATG
GCGTCGGAGCTCACGAGAACGGCGATACACGCCATGCGCGTCAAGGAATT
GAGGAGCGAGTTGGAGATACGAGACCTTGATTGTACAGGACTACGGCCTG
TATTGCAGGCGAGGTTATTAGAGGGTGAGTTACCAACGTCATCGGTGGTC
TTCTAGTGTTGGGGTGGGGGCTAATGGCGGGGCGTGAGGGTTCCTAAAAG
TCAGATGCCTCCCTTTTAGGTCCTACTTCATCGCTACATCGTTCAGGGTG
GAGTTGAAGCACGCATGCGTAGTATTGTTCTCGGTAATACCAGGCACACC
ATGAAGTTGAATATTTCATGAAAATATCGGAAATACAAGTTAGCGTGCAA
GTATTCAATCACCTCCGAGCCGGTTCTACAAGTTGCGAAATTAGTCAGTG
TGCCATTGTTCGCTGATACGACTTCCCCTGTTTGACCGTTGAGGTACCTT
CTAAGGTCTCGGGTATATGCAAACAAAAAAATATACGATTTTTTCATTTT
TTTATAGAAATCGTTTAACACCTGTACACCAGCCCACGCGGCTGTGTTTC
TCTTACTGCAGTTATTCAGGGAGGTTTTTTTTTTCTTGGTCTGTTATGGA
CGTGAGCACGCGGGGCTCAACCTCCTCTACTGACGGACGTCTGCATCAAT
TGTAATACGAGAAGACCTCGGTGTCATTCTCCTTTCAAATGAAATTCGTA
CCCAGTTACGCCGCCTATTGTGCTACCCCTTGTCCTATCTATTATAGTAC
AATTCTACATGTGCTTTGTACTTATCGGCGCAACAAGCCTGGAGGGCATC
AAACACGAACGTAAACCTGTGGGTCATGTATTTCCGTTGGTGACTACCTT
GCCGGTGGTAGTGGGCTGAATTTATCGATATCAGAGGGAGTCATAAATCA
AAAGTGCTTATTCTGGAGTGATTTATCTCTGGCGCCGGCAGACGCCACGC
TCTTGGAGCACCGTTTCCTTATCTCTCTAGCAGCAGCAGCAGCAGCAGCA
GCGAATAAACACCCATAAGTAAGCAGCAGGCCCCGTTTCGTTTCATTGTG
TAGTTCTCTTTCCCTTTTTGAAAAGCCTTGCCCGTATGGAAACGGTGTCC
ACCTGCACCTTTGATGCACGTAGATCTAGCGAACAGAAGTTCGCGACGTC
GACCAACGACCCTCAGCGAACAACACGCCAACGGCACAAAGGACGATACG
CTCGACAAGAATAGACCATCCCAGCAGCAGAGAGAGTCTCATACGCTGGG
AGCGGCTGTCGAGCTCGCCGAGCGACCGTTAACCTTGCGTTTTCTCCCTG
AAGATGCCGAAACTGGAGATGAGGGAGGAAGCACCGCGCGATCAAGTGGG
ATTGACGGAGGCTCACTCGCGTCTCCTGCTAGACAGAATGCGGGCTTGCC
CTTTGCATCGCTTCAGCCTCTCCGACCGTTTCCTGGCGAATTGTTGAAGG
ATAGGTTCGTTTTGCAGTTCGACGGCGGTTCTAAAGGCAACCCTGGGAAC
AGCGGTGCCGGCGCTGTGATATACAGGTGTGATTTTTTTCTTGAAAATCT
TGTGATCGGTCTCGTTTATTCTGTTATCGTGCAAATGCCTGCACACATGT
TGAATGAAAAGGCAAAAATCGTGCGTGTCTCACGGTTTCACCCTATCGTC
AAAGTGTTGCGTTGTTCTCCTTCGTGATGATGATTTTAAAGCTTTATCAC
CTCACGCACAGTGAGTACGTTACGTTACCGTCGGTCACTGCATGATATCC
CCCCCCATCATGCACCCAATGTGCGGTGCGTATTGTTTGATTTTTGCTGC
GGAATCGGAGAATGTAGGAGAGCTCACGACTTAACGGGGCACCAATGTGC
TTCACACATTGACGGCCGCCGGTTGCATCCGATCTCCAGAGGCATTTGCG
CGGCACTGGGCGAGATTTCCCTTGCTGCTGAACAAAGTGCTGCACGCTTT
TTCCATCACCCGTCACTGTGTTATATTCAGAAGGGCCAGTAGAGAGTGAG
CGATGTATTCGTCATGATCCATCCATCCTTTGGAATTGTTCTGTCTCTGA
TTGATGCGCGTATATGCGACAAGATCCGCAGTGAAAGCTATACCCCAAAT
ATGTCACGCCTGAAAGGAGTCAATGTTCTGCAGAGTTTGTGAGTTATGAC
ACGAGTGTGCAATATACGCCTAATTGCTATGTGTCCGGAGCGATTAGCCG
TTCGTTCGTTTTCTTTTTGGCGTAGGCTGGACGGCGGAGAGCGGAAAGAG
GTCTTCTGCGGATTTTATTGGGTGGGACCCGAAGCCACCAACAACGAAGC
GGAATACGAGGCTTTGATCGAGGGATTGCGCGCCGCCAAGGAGCTCGGAA
TTAGGGTGAACACTATAGTGACCACTATACACCCGTGCAGTTCGTGTTTC
GTTGCCATGCCCGTTCATTGACAACACTTCTTGACTTAGGCACAACCACT
CGCTGCGTTCGCAGTGGGGTGTTTTATCCATGCAAAGCATATAATTATAC
TTCGAATTTAGTCAAATAGCTTTGCACTGACGGTAAAAAGTTCTCCGAGG
TGATCATTACCGTCGCCTTGTGGCATAACAGGTAATAAGTGATGGGAATT
GCAGGCCGCTCGGATGGGAATATCGCACCATGTCTATTCAGTTGCTAGCT
ATTGTACTGTCTGAGGTCAGGTGTTGGGTCATGCTTGGAATAATCTCTGA
GTATTTAACCCAGGAATCTACCGATGTGATCGGATTTGAAGACCGTCACT
TTGAGCGCGGGGTACACTTGCAGTCGATGTGTGCAAACGCCCAACTCTTC
CATCATTCGCCATCGGTGGATTTTATCCAAATCATGGTTATGTTCCTGAA
GGGTTAAGCATTGTTTCTCTCCCCTTGTCTCTTTCGGTCAATTGTTTTGT
CTGTCTTGGTCATCATGTACTATTTGTCTACCCGTGTTCCTTTTGTTGTC
TATTCAGCGATCACTGTCGCGGCTCTGTTGCTGATGTGAATCCACCGTTG
GCTTCGTTGTGTGTTCAAATGGCAGAATATCATGGTGGAGGGAGACTCGA
ATCTCGTGATCCGGCAAATGCTTGGGGAGTATCAGGTGAACCGAGGGTGA
CGTTCGCACTGGCTGTAATTTTCGGATGCAGATACAAAGATGGAATTCGC
CTGCGTGTGCGCAAGAGGATTGCATTCCTGTACACCAGTACTTGACAAGC
TACTCAAGCTCTTTTGATGCGCATAGATGTACACATACTCCCTCATCCCT
GTCCCCTACGGCGACAGCTTACCCGAGGTTTTTGTTCGTTCGAAGGCTTG
GAAAACATTTCCGCAGATTCAACTCCAACATCTTGTGTGAGTATATCGTC
TGATTTCGAACCTTTTTCTCAAAAGCACAAGTTGTCAAGAGTCCCTGCGG
GAAATTGTGCACTATTCGACTCCATGGTTGCAAAAAGCAAGAAACGTTCT
AGTCCAAGGTTTATCCTACAATGGTGATACCCTCATCGATCGATCTCAAT
GCGGAACTTGCGGACGCTCACACGCCCATGTAGCCTGCCAGTTTCTCCTA
GAAATTAGCCACGCGTTTTTTTTTCATTCAGGTCTCATGTTCGCCTGCCG
ATAGACTATCGCGGAAGTATTGAAGTACCGTAAAGGGTTATGCAAAGGCC
CAGGGGGTGATCACTTTTTTTTCAGATCGGATTTTCTCGGGAAAACTACG
ATGCTAGCTATTGAAACTGAAAGGTATGTCATTGGAAAGATCTATCTCAT
TGAGATAAAATCTGTTATTGGATAAACCTGCTCTTTCAAACGCACATGGG
CTTCGATTTTCTAGAAATTGAGCCTAAAAAACAATCGCCCTCGAGGCACT
TTGACAGCGCTTGACGGTAGGTATACTTGAATATATGACGTTAACACCAT
CGAATCTCCAAGTATCATGCATGGTTCAGCCACGATTCTAGTTATATCCA
CAGAATGCCTGCACATTGTAGCCCCAAAAGGGTAGAATCTGCAGTACCCA
CACGTTTGGGAGCACGATCTTGAAAGGTACGCATGCCTCTTGACGCTGTC
GTACATGACACGCATACTCACACTCCATTGTTGTTGTGCGCAGGTTAAAA
GCCCAAAAATGGGTCCGAAGTGGCTGGAAGCACAAGCGTTGGTTGAGGCG
TTCGATTCCTCCTTCGCAATGCGCCACATTCCGCGAGAGATGAATAGCCG
AGCGGATGAATTGGCAAACAAAGCCATGACGTCAAGGCAGACCAGCCGTT
ACGCAGTAAGCTAAGAACCGTCAGGTTTTTCCATTTTAACAGTAACGGTT
ATTCGCAAGTATGGTGAAACGAGTCTGGAAAACGATCGGACTTAATGAAG
GCCAAGATCATGTGGTTCTAGCGTTTTGTACAAGTTGTATCAACGGTGGC
TTTCGTGTACCAATATTGTTTGTCGTAGAATTTCTGTCTTGCGAACGTAG
TACACAACAGTCTACGATTGTTGCTAATTATGTCGTACTAGAGGAATTTA
CGGTTCTTTTGTATGTCAGTATGTCACGATCGCGTTCCTAATTTGTCGTT
GAATGTACGAGAAAGTTCTTGATGTCACATGATTTATGGTTTTATTGTAC
TTTCTTGTCTGCCATTCATCTCCACATGGAACTTTTTAATATTATTCTAC
ATGATATTGACCCTCTTTTATCTTTTTACTTGCAGTGAGAAATGATCGTT
GTTTTCATTCAATATTCATGTTTTATTTCCCACTTCTGTGTGTTGTACGT
GGTGTATGTTAACGAGCAAGTTTTCTTTCGGTTTCATGCTTCCTTCCTGT
TAGTGTCTTCATTTATTGTTTATATTTGTTTCAACATTTTCTTCTTATAT
GTTCAC
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Coding sequence (CDS) from alignment at H-paniculata_contig1057:22405..27310-

>mRNA_H-paniculata_contig1057.373.1 ID=mRNA_H-paniculata_contig1057.373.1|Name=mRNA_H-paniculata_contig1057.373.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1782bp|location=Sequence derived from alignment at H-paniculata_contig1057:22405..27310- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGTCGGAGCTCACGAGAACGGCGATACACGCCATGCGCGTCAAGGA
ATTGAGGAGCGAGTTGGAGATACGAGACCTTGATTGTACAGGACTACGGC
CTGTATTGCAGGCGAGGTTATTAGAGGATGGCGTCGGAGCTCACGAGAAC
GGCGATACACGCCATGCGCGTCAAGGAATTGAGGAGCGAGTTGGAGATAC
GAGACCTTGATTGTACAGGACTACGGCCTGTATTGCAGGCGAGGTTATTA
GAGGATCTAGCGAACAGAAGTTCGCGACGTCGACCAACGACCCTCAGCGA
ACAACACGCCAACGGCACAAAGGACGATACGCTCGACAAGAATAGACCAT
CCCAGCAGCAGAGAGAGTCTCATACGCTGGGAGCGGCTGTCGAGCTCGCC
GAGCGACCGTTAACCTTGCGTTTTCTCCCTGAAGATGCCGAAACTGGAGA
TGAGGGAGGAAGCACCGCGCGATCAAGTGGGATTGACGGAGGCTCACTCG
CGTCTCCTGCTAGACAGAATGCGGGCTTGCCCTTTGCATCGCTTCAGCCT
CTCCGACCGTTTCCTGGCGAATTGTTGAAGGATAGGTTCGTTTTGCAGTT
CGACGGCGGTTCTAAAGGCAACCCTGGGAACAGCGGTGCCGGCGCTGTGA
TATACAGATCTAGCGAACAGAAGTTCGCGACGTCGACCAACGACCCTCAG
CGAACAACACGCCAACGGCACAAAGGACGATACGCTCGACAAGAATAGAC
CATCCCAGCAGCAGAGAGAGTCTCATACGCTGGGAGCGGCTGTCGAGCTC
GCCGAGCGACCGTTAACCTTGCGTTTTCTCCCTGAAGATGCCGAAACTGG
AGATGAGGGAGGAAGCACCGCGCGATCAAGTGGGATTGACGGAGGCTCAC
TCGCGTCTCCTGCTAGACAGAATGCGGGCTTGCCCTTTGCATCGCTTCAG
CCTCTCCGACCGTTTCCTGGCGAATTGTTGAAGGATAGGTTCGTTTTGCA
GTTCGACGGCGGTTCTAAAGGCAACCCTGGGAACAGCGGTGCCGGCGCTG
TGATATACAGGCTGGACGGCGGAGAGCGGAAAGAGGTCTTCTGCGGATTT
TATTGGGTGGGACCCGAAGCCACCAACAACGAAGCGGAATACGAGGCTTT
GATCGAGGGATTGCGCGCCGCCAAGGAGCTCGGAATTAGGGCTGGACGGC
GGAGAGCGGAAAGAGGTCTTCTGCGGATTTTATTGGGTGGGACCCGAAGC
CACCAACAACGAAGCGGAATACGAGGCTTTGATCGAGGGATTGCGCGCCG
CCAAGGAGCTCGGAATTAGGAATATCATGGTGGAGGGAGACTCGAATCTC
GTGATCCGGCAAATGCTTGGGGAGTATCAGAATATCATGGTGGAGGGAGA
CTCGAATCTCGTGATCCGGCAAATGCTTGGGGAGTATCAGGTTAAAAGCC
CAAAAATGGGTCCGAAGTGGCTGGAAGCACAAGCGTTGGTTGAGGCGTTC
GATTCCTCCTTCGCAATGCGCCACATTCCGCGAGAGATGAATAGCCGAGC
GGATGAATTGGCAAACAAAGCCATGACGTCAAGGCAGACCAGCCGTTACG
CAGTAAGCTAAGTTAAAAGCCCAAAAATGGGTCCGAAGTGGCTGGAAGCA
CAAGCGTTGGTTGAGGCGTTCGATTCCTCCTTCGCAATGCGCCACATTCC
GCGAGAGATGAATAGCCGAGCGGATGAATTGGCAAACAAAGCCATGACGT
CAAGGCAGACCAGCCGTTACGCAGTAAGCTAA
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