mRNA_H-paniculata_contig10540.357.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10540.357.1 vs. uniprot
Match: A0A6H5JV72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV72_9PHAE) HSP 1 Score: 316 bits (810), Expect = 1.550e-99 Identity = 152/222 (68.47%), Postives = 181/222 (81.53%), Query Frame = 3 Query: 273 MRSGEGGSDKAGVIQSHPIDKLHADNGLTEQGVLEAQKAASVLRTLGIDNAFIWADISSRAQETARIVAAELDIRQERIVPEYAFLEPRGMGIFDGKEAAAILPE----VYKADAEDHQWRPPPNTDGTPNESATDVFVRVRQLMSKLETQYQGENIVIISPDSDCLSVLQAFILGEELGTHSRYYLSPGEGRQLRISQDTEYMFDTRRTMRASFASGEDVG 926 MRSG+GGSDK GV+QSHPIDKLH DN LT+QGV E Q+AA VLR LG+ +AFIWADIS +TARI+A EL IRQER++PEYAFLEPRGMGIFDGKE A +LPE VY+ DA WRPPPNTDGTPNES DVFVRVRQL+SKLETQYQGE+++I++PDSDCLSVLQ+F+LGE++G HS+YYL PGEGRQLR+S DTE ++ RR +A + +G Sbjct: 1 MRSGQGGSDKEGVVQSHPIDKLHVDNRLTDQGVEETQRAAGVLRALGVADAFIWADISRVDMDTARILAQELGIRQERVIPEYAFLEPRGMGIFDGKEVATVLPEAEGKVYEKDAVSLTWRPPPNTDGTPNESVDDVFVRVRQLLSKLETQYQGEDVIIVAPDSDCLSVLQSFVLGEDMGKHSKYYLRPGEGRQLRVSLDTEVGYNVRREAKAGSTTSASIG 222
BLAST of mRNA_H-paniculata_contig10540.357.1 vs. uniprot
Match: D7FMD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMD0_ECTSI) HSP 1 Score: 275 bits (704), Expect = 3.350e-83 Identity = 135/190 (71.05%), Postives = 154/190 (81.05%), Query Frame = 3 Query: 132 VSRREFLSSVVIAGV----VAIGAVFRGPEPAAANGMLEFPPLRVNNRYFLMRSGEGGSDKAGVIQSHPIDKLHADNGLTEQGVLEAQKAASVLRTLGIDNAFIWADISSRAQETARIVAAELDIRQERIVPEYAFLEPRGMGIFDGKEAAAILPEVYKADAEDHQWRPPPNTDGTPNESATDVFVRVRQ 689 VSR F +S+ A + A+G V PE A+ANGML+FPP R+NNRYFLMRSG+G SDK GV+QSHPIDKLH DN LT+QGV E Q+AA VLR LG+ +AFIWADISSRAQ+TARI+A ELDIRQER++PEYAFLEPRGMGIFDGKE A +LPEVY+ DA WRPPPNTDGTPNES DVFVRVRQ Sbjct: 82 VSRGGFFASIATAALGTSAAALGLVLASPESASANGMLDFPPARLNNRYFLMRSGQGASDKEGVVQSHPIDKLHVDNRLTDQGVEETQRAAGVLRALGVGDAFIWADISSRAQDTARILAQELDIRQERVIPEYAFLEPRGMGIFDGKEVATVLPEVYEKDAISLTWRPPPNTDGTPNESVDDVFVRVRQ 271
BLAST of mRNA_H-paniculata_contig10540.357.1 vs. uniprot
Match: A0A835Z0I4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0I4_9STRA) HSP 1 Score: 255 bits (652), Expect = 6.620e-75 Identity = 145/271 (53.51%), Postives = 188/271 (69.37%), Query Frame = 3 Query: 84 ARHVVALEMSASDGKPVSRREFLSSVVIAGVVAIGAVFRG-PEPAAANGMLEFPPLRVNNRYFLMRSGEGGSDKAGVIQSHPIDKLHADNGLTEQGVLEAQKAASVLRTLGI--DN--AFIWADISSRAQETARIVAAELDIRQERIVPEYAFLEPRGMGIFDGKEAAAILPEVYKADAEDHQWRPPPNTDGTPNESATDVFVRVRQLMSKLETQYQGENIVIISPDSDCLSVLQAFILGEEL-GTHSRYYLSPGEGRQLRISQDTEYMFD 878 AR VV M A+DG ++RRE L+ A VA+G PEPA A+ ++ PPLR+NNRYFLMRSG+ +D AG IQ+HPI KLH NGLTE G +A+KAA L LG DN I+ DIS+R ETA ++ ++I +ER+VPEYAFLEPRGMG+++ AILP +Y+ADA+D WRPPPN DGT +ES DV VR RQLMSKLETQ+ E+IV++SPDSD LS+LQAF+LGEE HS+++ GE R L +S+ T+ ++ Sbjct: 54 ARRVVC--MGAADGG-ITRREVLTG---AAAVAVGVSLASYPEPAEASLVMS-PPLRLNNRYFLMRSGQSFADAAGQIQTHPIYKLHMSNGLTELGRRQAEKAAESLSGLGAGQDNRGVIIYHDISARCLETANVLCDCMEIGRERVVPEYAFLEPRGMGLWESGNVTAILPALYRADAQDPTWRPPPNDDGTLSESVLDVLVRGRQLMSKLETQFSAEDIVLVSPDSDNLSILQAFVLGEEFFAKHSKFFFRAGEMRPLLLSEKTQTRYE 317
BLAST of mRNA_H-paniculata_contig10540.357.1 vs. uniprot
Match: UPI000D1C4CAB (uncharacterized protein LOC9662274 n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C4CAB) HSP 1 Score: 213 bits (541), Expect = 2.540e-59 Identity = 109/216 (50.46%), Postives = 151/216 (69.91%), Query Frame = 3 Query: 210 PAAANGMLEFPPLRVNNRYFLMRSGEGGSDKAGVIQSHPIDKLHADNGLTEQGVLEAQKAASVLRTLGI--DNAFIWADISSRAQETARIVAAELDIRQERIVPEYAFLEPRGMGIFDGKEAAAILPEVYKADAEDHQWRPPPNTDGTPNESATDVFVRVRQLMSKLETQYQGENIVIISPDSDCLSVLQAFILGEELGTHSRYYLSPGEGRQLRI 851 PA A+G+ + PP R+ NRYFL+R+GE + +G+I ++P+ K +NGL+E G +A +AA L+ LG D+ +IW I+ R+ + A ++A DI + RIVPEY+FL+ RG+G ++GK A+ EVY+ D Q RPPPNT+GTPNES DVFVRV QLMS LETQY G++IVI+SPDSD LSVLQA + G +L HS+ +PGE R++ I Sbjct: 70 PAFASGLFQMPPTRLKNRYFLVRAGESEYETSGIINTNPVSKTSLENGLSEAGKKQAVQAAVKLKNLGACKDSCWIWPSITQRSYQAAELIAYVNDISRSRIVPEYSFLDARGLGAYEGKTLDAVN-EVYETDVVSLQSRPPPNTNGTPNESVADVFVRVTQLMSILETQYAGDSIVIVSPDSDNLSVLQAGLYGLDLRRHSQLSFAPGEVREVDI 284
BLAST of mRNA_H-paniculata_contig10540.357.1 vs. uniprot
Match: K3XKJ8_SETIT (Uncharacterized protein n=12 Tax=Panicoideae TaxID=147369 RepID=K3XKJ8_SETIT) HSP 1 Score: 211 bits (536), Expect = 1.130e-58 Identity = 110/224 (49.11%), Postives = 148/224 (66.07%), Query Frame = 3 Query: 204 PEPAAANGMLEFPPLRVNNRYFLMRSGEGGSDKAGVIQSHPIDKLHADNGLTEQGVLEAQKAASVLRTLGI--DNAFIWADISSRAQETARIVAAELDIRQERIVPEYAFLEPRGMGIFDGKEAAAILPEVYKADAEDHQWRPPPNTDGTPNESATDVFVRVRQLMSKLETQYQGENIVIISPDSDCLSVLQAFILGEELGTHSRYYLSPGEGRQLRISQDTEY 869 P PAAA G+ PP + NRYFL+R+GE + G+++++P+ K DNGL+ G+ + +AA L+ LG D+ +IW I+ RA + A I+AA I + RIVPEY+FL+ RG+G F+GK + LPEVY +D +PPP +DGTPNES DVFVRV QLMS LETQY GE +VI+SPDSD LS+LQA ++G +L HS + PGE R + S EY Sbjct: 56 PAPAAARGLFRMPPAALANRYFLVRAGESVYEGQGLLRTNPVAKTSVDNGLSPVGLRQTARAALELQRLGACEDDCWIWPSITQRAYQAAEIIAAANGINRSRIVPEYSFLDARGLGAFEGK-SLDTLPEVYASDNISPDMKPPPISDGTPNESVADVFVRVTQLMSILETQYSGETVVIVSPDSDNLSILQAGLIGLDLLRHSSLFFKPGEVRPVDPSSIPEY 278
BLAST of mRNA_H-paniculata_contig10540.357.1 vs. uniprot
Match: I1NQD2_ORYGL (Uncharacterized protein n=12 Tax=Oryzeae TaxID=147380 RepID=I1NQD2_ORYGL) HSP 1 Score: 209 bits (531), Expect = 5.290e-58 Identity = 107/224 (47.77%), Postives = 150/224 (66.96%), Query Frame = 3 Query: 204 PEPAAANGMLEFPPLRVNNRYFLMRSGEGGSDKAGVIQSHPIDKLHADNGLTEQGVLEAQKAASVLRTLGI--DNAFIWADISSRAQETARIVAAELDIRQERIVPEYAFLEPRGMGIFDGKEAAAILPEVYKADAEDHQWRPPPNTDGTPNESATDVFVRVRQLMSKLETQYQGENIVIISPDSDCLSVLQAFILGEELGTHSRYYLSPGEGRQLRISQDTEY 869 P A+A G+ PP R+ NRYFL+R+GE + GV++++P+ K D+GL+ G+ +A +AA L+ LG D+ +IW I+ RA + A I+AA +I + IVPEY+FL+ RG+G F+GK + LPEVY +D+ +PPP +DGTPNES DVFVRV QLMS LETQY G+ +VI+SPDSD LS+LQA ++G +L HS + PGE R + + EY Sbjct: 53 PAAASARGLFRMPPPRLANRYFLVRAGESVYEGQGVVRTNPVSKTSVDSGLSPAGLRQAARAALELQRLGACEDDCWIWPSITQRAYQAAEIIAAANEINRSHIVPEYSFLDARGLGAFEGK-SLETLPEVYASDSISPDIKPPPISDGTPNESVADVFVRVTQLMSILETQYSGDTVVIVSPDSDNLSILQAGLIGLDLRRHSSLFFQPGEVRPVDPASIPEY 275
BLAST of mRNA_H-paniculata_contig10540.357.1 vs. uniprot
Match: A0A176VTR8_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VTR8_MARPO) HSP 1 Score: 209 bits (532), Expect = 1.060e-57 Identity = 103/217 (47.47%), Postives = 151/217 (69.59%), Query Frame = 3 Query: 210 PAAANGMLEFPPLRVNNRYFLMRSGEGGSDKAGVIQSHPIDKLHADNGLTEQGVLEAQKAASVLRTLGI--DNAFIWADISSRAQETARIVAAELDIRQERIVPEYAFLEPRGMGIFDGKEAAAILPEVYKADAEDHQWRPPPNTDGTPNESATDVFVRVRQLMSKLETQYQGENIVIISPDSDCLSVLQAFILGEELGTHSRYYLSPGEGRQLRIS 854 PA+ANG+L+ PP + NRYFL+RSG + G+I ++P+ K DNGL+ +G+ +A+KAA L+ +G D+ +IW I+ RA ++A ++A +I RIVPEY+FL+ RG+G ++G++ + + E+Y D+E +PPP TDGTPNES TDV VR+ QLMS LETQY G+ +VI+SPDSD LS+LQA + G++L HS +PGE R++ S Sbjct: 91 PASANGLLQMPPRELKNRYFLVRSGLSNYESMGLINTNPVSKTSVDNGLSPEGLRQAEKAAHQLKDIGACEDSCWIWPSITMRAYQSAELIAYINNITYSRIVPEYSFLDARGLGAYEGRKLSTV-DEIYAGDSESVMVKPPPFTDGTPNESVTDVLVRLTQLMSILETQYYGDAVVIVSPDSDNLSILQAALTGQDLRRHSSLAFAPGEVRRIDAS 306
BLAST of mRNA_H-paniculata_contig10540.357.1 vs. uniprot
Match: A0A804IM79_MUSAM (Uncharacterized protein n=2 Tax=Musaceae TaxID=4637 RepID=A0A804IM79_MUSAM) HSP 1 Score: 205 bits (522), Expect = 1.100e-56 Identity = 105/224 (46.88%), Postives = 150/224 (66.96%), Query Frame = 3 Query: 204 PEPAAANGMLEFPPLRVNNRYFLMRSGEGGSDKAGVIQSHPIDKLHADNGLTEQGVLEAQKAASVLRTLGI--DNAFIWADISSRAQETARIVAAELDIRQERIVPEYAFLEPRGMGIFDGKEAAAILPEVYKADAEDHQWRPPPNTDGTPNESATDVFVRVRQLMSKLETQYQGENIVIISPDSDCLSVLQAFILGEELGTHSRYYLSPGEGRQLRISQDTEY 869 P PA A G+ PP R+ NRYFL+R+GE + AGV++++P+ K D+GL+ +G +A +AA L+ +G D+ +IW I+ ++ + A I+A+ I + RIVPEY+FL+ RG+G F+G+ +I EVY++D+ +PPP DGTPNES DVFVRV QLMS LETQY G+ ++I+SPDSD LSVLQA ++G +L HS SPGE R + S +Y Sbjct: 56 PSPARARGLFRMPPARLANRYFLVRAGESVYETAGVLRTNPVAKTSVDSGLSPEGARQAARAALELKQMGACEDSCWIWPSITQQSYQAAEIIASVNSIDRSRIVPEYSFLDARGLGAFEGRNLGSIS-EVYESDSLSPDNKPPPVDDGTPNESVADVFVRVTQLMSILETQYSGDTVIIVSPDSDNLSVLQAGLVGLDLRRHSDLLFSPGEVRPVDPSSIPDY 278
BLAST of mRNA_H-paniculata_contig10540.357.1 vs. uniprot
Match: A0A833VDF0_9POAL (Histidine phosphatase superfamily (Branch 1) n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833VDF0_9POAL) HSP 1 Score: 204 bits (518), Expect = 2.300e-56 Identity = 105/223 (47.09%), Postives = 146/223 (65.47%), Query Frame = 3 Query: 207 EPAAANGMLEFPPLRVNNRYFLMRSGEGGSDKAGVIQSHPIDKLHADNGLTEQGVLEAQKAASVLRTLGI--DNAFIWADISSRAQETARIVAAELDIRQERIVPEYAFLEPRGMGIFDGKEAAAILPEVYKADAEDHQWRPPPNTDGTPNESATDVFVRVRQLMSKLETQYQGENIVIISPDSDCLSVLQAFILGEELGTHSRYYLSPGEGRQLRISQDTEY 869 P+ + G+ PP R+ NRYFL+RSGE + AGVI+++P+ K D+GL+ G+ + +AA L+ LG D+ +IW I+ RA + A I+A+ + RIVPEY+FL+ RG+G F+G+ L EVY +D+ +PPP TDGTPNES DVFVRV QLMS LETQY G+ ++I+SPDSD LS+LQA ++G +L HS SPGE R + + EY Sbjct: 38 SPSHSRGLFRMPPPRLANRYFLVRSGESTFETAGVIRTNPVSKTSVDSGLSADGLRQTARAALELKRLGACEDDCWIWPSITQRAYQAAEIIASVNGVNYSRIVPEYSFLDARGLGSFEGR-GLGTLSEVYASDSISADIKPPPITDGTPNESVADVFVRVTQLMSILETQYSGDTVIIVSPDSDNLSILQAGLIGLDLRRHSSLLFSPGEVRLVDPASIPEY 259
BLAST of mRNA_H-paniculata_contig10540.357.1 vs. uniprot
Match: I1HQ26_BRADI (Uncharacterized protein n=13 Tax=Pooideae TaxID=147368 RepID=I1HQ26_BRADI) HSP 1 Score: 204 bits (519), Expect = 2.310e-56 Identity = 104/224 (46.43%), Postives = 147/224 (65.62%), Query Frame = 3 Query: 204 PEPAAANGMLEFPPLRVNNRYFLMRSGEGGSDKAGVIQSHPIDKLHADNGLTEQGVLEAQKAASVLRTLGI--DNAFIWADISSRAQETARIVAAELDIRQERIVPEYAFLEPRGMGIFDGKEAAAILPEVYKADAEDHQWRPPPNTDGTPNESATDVFVRVRQLMSKLETQYQGENIVIISPDSDCLSVLQAFILGEELGTHSRYYLSPGEGRQLRISQDTEY 869 P A+A G+ PP + NRYFL+R+GE + G+++++P+ K D+GL+ G+ +A +AA LR LG D+ +IW I+ RA + A I+AA I + +IVPEY+FL+ RG+G ++GK +LPEVY +D +PPP DGTPNES DVFVRV QLMS LETQY G+ +VI+SPDSD LS+LQA ++G +L H+ + PGE R + + EY Sbjct: 48 PAAASARGLFRMPPPGLANRYFLVRAGESVYEGQGLLRTNPVAKTSVDSGLSPAGLRQAARAALELRRLGACEDDCWIWPSITQRAYQAAEIIAAANSINRSKIVPEYSFLDARGLGAYEGKRLE-VLPEVYASDNISSDIKPPPTNDGTPNESVADVFVRVTQLMSILETQYSGDTVVIVSPDSDNLSILQAGLIGLDLRRHNSLFFQPGEVRPVDPASIPEY 270 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10540.357.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10540.357.1 >prot_H-paniculata_contig10540.357.1 ID=prot_H-paniculata_contig10540.357.1|Name=mRNA_H-paniculata_contig10540.357.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=286bp MSASDGKPVSRREFLSSVVIAGVVAIGAVFRGPEPAAANGMLEFPPLRVNback to top mRNA from alignment at H-paniculata_contig10540:397..8343+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10540.357.1 ID=mRNA_H-paniculata_contig10540.357.1|Name=mRNA_H-paniculata_contig10540.357.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7947bp|location=Sequence derived from alignment at H-paniculata_contig10540:397..8343+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10540:397..8343+ >mRNA_H-paniculata_contig10540.357.1 ID=mRNA_H-paniculata_contig10540.357.1|Name=mRNA_H-paniculata_contig10540.357.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1716bp|location=Sequence derived from alignment at H-paniculata_contig10540:397..8343+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |