mRNA_H-paniculata_contig10536.350.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig10536.350.1
Unique NamemRNA_H-paniculata_contig10536.350.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig10536.350.1 vs. uniprot
Match: D8LL65_ECTSI (Phosphatidylinositol-3-phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL65_ECTSI)

HSP 1 Score: 391 bits (1004), Expect = 8.610e-125
Identity = 186/263 (70.72%), Postives = 217/263 (82.51%), Query Frame = 1 
Query:    1 RRTAVLRIMDARHMISAKGHLIMGKGHEVISRLGGRRQASLVFLEIPNIHAMQQGYSALVAACCAREDDQAWLLNLHNSRWLEYVGLILKGASDIAAYLEAGDPVLVHCSDGWDRTSQLVSLAQLMVDPFYRTIEGFEVLISKDWCSFGHRFATRSGYRVDPSGETAPIFLQFLDATQQLLRQFPEAFEFSEDLLLLLVHAYHSRWFNDFLHDNEYERVLAHVRCSAA----------GGTTASIWDHVRCRKERYRNVLWAG 759
            R +AVLRI+DAR MISAKGHLI+GKGHEVISRLGG R+ASL FLEIPN+HAMQQ ++ L++AC  REDD AWL+NLHNSRWL++VG +L GASD+A YLEAGDPVLVHCSDGWDRTSQL +LAQL++DP+YRTIEGF+VL+SKDWCSFGHRFA R G+    + E++PIF QFLDAT QLLRQFP +FEFSE+LLLLL+HAYHSRWFNDFL D+EYER LAH R S A          G  T S+W  VR R+E Y N+LWAG
Sbjct:  504 RASAVLRIVDARPMISAKGHLILGKGHEVISRLGGPRRASLTFLEIPNVHAMQQSFATLMSACSGREDDPAWLVNLHNSRWLDFVGALLSGASDVAEYLEAGDPVLVHCSDGWDRTSQLTALAQLLLDPYYRTIEGFQVLVSKDWCSFGHRFAVRGGHGRQGAAESSPIFPQFLDATYQLLRQFPASFEFSENLLLLLLHAYHSRWFNDFLQDSEYERALAHARSSRAAPIGNGNGNNGDRTVSVWSQVRIRRELYENLLWAG 766
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BLAST of mRNA_H-paniculata_contig10536.350.1 vs. uniprot
Match: F0Y8Q0_AURAN (Myotubularin phosphatase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8Q0_AURAN)

HSP 1 Score: 241 bits (616), Expect = 1.400e-72
Identity = 122/266 (45.86%), Postives = 166/266 (62.41%), Query Frame = 1 
Query:   13 VLRIMDARHMISAKGHLIMGKGHEVISRLGGRRQASLVFLEIPNIHAMQQGYSALVAACCAREDDQAWLLNLHNSRWLEYVGLILKGASDIAAYLEAGDPVLVHCSDGWDRTSQLVSLAQLMVDPFYRTIEGFEVLISKDWCSFGHRFATRSGYRVDPSGETAPIFLQFLDATQQLLRQFPEAFEFSEDLLLLLVHAYHSRWFNDFLHDNEYERVLAHVRCSAAGGTT---------------ASIWDHVRCRKERYRNVLWAGTG 765
            VLRI+D R +++AK +  MGKGHEV+SRLGG+  A+L FL+I NIH MQ+ +  L  A  A ++       +H+SRWL +V L+L+GA  +A +   GDPVLVHCSDGWDRT+Q+  LAQ ++DP+ RTI+GF VL+ KDWC+FGH F  R G+  DP  ET PIFLQFLDA  Q++ Q P A EF+E+ L +L  A  SRWF +FL D++ +R   +       G T                SIW     +++R+ N L+   G
Sbjct:  112 VLRIVDCRPVLNAKANAAMGKGHEVMSRLGGKESATLEFLDIANIHGMQESFRVLREALGAPDEGDGVYRAVHDSRWLNHVSLLLRGAVAVADHSAGGDPVLVHCSDGWDRTAQVCGLAQFLLDPYCRTIDGFGVLVEKDWCAFGHMFRERGGFGSDPQQETGPIFLQFLDAVSQIMWQCPTACEFTEEFLEVLADAERSRWFANFLRDSDRDRARENSGSPRGPGRTPRGAARPRPEENDEAVSIWRVFAFQRDRFSNALYDRDG 377
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BLAST of mRNA_H-paniculata_contig10536.350.1 vs. uniprot
Match: A0A812RUA9_SYMMI (MTMR4 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RUA9_SYMMI)

HSP 1 Score: 225 bits (573), Expect = 3.600e-64
Identity = 115/214 (53.74%), Postives = 150/214 (70.09%), Query Frame = 1 
Query:   16 LRIMDARHMISAKGHLIMGKGHEVISRLGGRRQASLVFLEIPNIHAMQQGYSALVAACCAREDDQAWLLNLHNSRWLEYVGLILKGASDIAAYLEAGDPVLVHCSDGWDRTSQLVSLAQLMVDPFYRTIEGFEVLISKDWCSFGHRFATRSGYRVDPSGETAPIFLQFLDATQQLLRQFPEAFEFSEDLLLLLVHAYHSRWFNDFLHDNEYERV 657
            LRI+DAR +I+AKG+ +MGKGHE+I RLGG    +L F  I NIH M++ Y AL   CC       W   L  ++WL ++  ++KG+  +A +LE GDPVLVHCSDGWDRT+Q+VSLAQLM+DP+YRTI GF  LISKD+ +FGH F  RSG  V P  E +PIFLQFLDA  Q+ RQ P  FEF++ LL L+ +A  +R+ +DF+ DNE  R+
Sbjct:   11 LRIVDARPIINAKGNALMGKGHEIIGRLGGEMCTTLSFAGIANIHVMRENYGALRQICCELTRSCNWFHMLQETKWLLHLSTLIKGSLVVALHLERGDPVLVHCSDGWDRTAQMVSLAQLMLDPYYRTIAGFRSLISKDFSTFGHMFHHRSGL-VSPE-EGSPIFLQFLDAVWQIWRQMPWEFEFTDSLLELIAYAVGTRFTDDFVFDNEKSRL 222
[Close]
BLAST of mRNA_H-paniculata_contig10536.350.1 vs. uniprot
Match: A0A1V9Y998_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y998_9STRA)

HSP 1 Score: 224 bits (570), Expect = 2.160e-63
Identity = 119/256 (46.48%), Postives = 161/256 (62.89%), Query Frame = 1 
Query:   10 AVLRIMDARHMISAKGHLIMGKGHEVISRLG--GRRQASLVFLEIPNIHAMQQGYSALVAACCAREDDQAWLLNLHNSRWLEYVGLILKGASDIAAYLEAGDPVLVHCSDGWDRTSQLVSLAQLMVDPFYRTIEGFEVLISKDWCSFGHRFATRSGYRVDPSGETAPIFLQFLDATQQLLRQFPEAFEFSEDLLLLLVHAYHSRWFNDFLHDNEYERVLAHVRCSAAGGTTASIWDHVRCRKERYRNVLWAGTGHE 771
            AV+ I+DAR  I+AK + + GKGHE        G   AS+ F+ I NIH ++  ++ L  A   + DD  +   L  SRWLE++  IL+GA+++A++LE GD VLVHCSDGWDRTSQL +LAQLM+DPFYRTIEGF +L+ KDWCSFGH FA R  +    S +T+P+FLQFLDA  QL  QFP  F+F+E  L  +  A ++ WF  F  ++E +R     +       T S+WD VR   E Y N L++   H+
Sbjct:   31 AVVHIVDARPEINAKSNALAGKGHESAKHYDRDGVPCASIAFMGIDNIHVVRTSFNVLSQALY-QVDDTTFFSTLQKSRWLEHITSILQGATEMASHLERGDAVLVHCSDGWDRTSQLSALAQLMLDPFYRTIEGFAILVEKDWCSFGHMFAKRCAFPT--SDDTSPVFLQFLDAVYQLTLQFPTHFQFNEMYLATVADAVYTSWFGTFQKNSEKDR-----KTFVESVATVSLWDTVRASTESYLNPLFSSDRHD 278
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BLAST of mRNA_H-paniculata_contig10536.350.1 vs. uniprot
Match: UPI000A2A85A7 (uncharacterized protein LOC110238220 isoform X1 n=2 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A85A7)

HSP 1 Score: 228 bits (581), Expect = 5.990e-63
Identity = 117/245 (47.76%), Postives = 163/245 (66.53%), Query Frame = 1 
Query:   22 IMDARHMISAKGHLIMGKGHE-VISRLGGRRQASLVFLEIPNIHAMQQGYSALVAACCAREDDQAWLLNLHNSRWLEYVGLILKGASDIAAYLEAGDPVLVHCSDGWDRTSQLVSLAQLMVDPFYRTIEGFEVLISKDWCSFGHRFATRSGYRVDPSGETAPIFLQFLDATQQLLRQFPEAFEFSEDLLLLLVHAYHSRWFNDFLHDNEYERVLAHVRCSAAGGTTASIWDHVRCRKERYRNVLW 753
            I DAR M++A G+++MGKG E  ++R  G    +LVFL+IPNIHA++     L A C      + WL +L +++WL Y+  ILKGA+ IA ++E G   LVHCSDGWDRTSQL SLAQL++DP+YRT +G +VLI K+W SFGHRF  R G+   P G+ +PIFLQF D   Q+ RQFP AFEF+ + LL +    +S+WF +FLH+N  ER LA +  S     T S+W ++   K+ ++N ++
Sbjct:  595 IFDARSMMAASGNMLMGKGTEDTLNRYQG---CNLVFLDIPNIHAVRDSLERLQAVC-ESSSQKKWLSHLESTQWLAYIAAILKGATTIARFIEKGVSTLVHCSDGWDRTSQLTSLAQLLLDPYYRTFKGLQVLIDKEWVSFGHRFKDRLGHPSCP-GQRSPIFLQFXDCVWQIHRQFPFAFEFTAEYLLRIADHVNSQWFGNFLHNNVRERQLAFISRS-----TVSLWSYLDAIKDEHKNTIY 829
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BLAST of mRNA_H-paniculata_contig10536.350.1 vs. uniprot
Match: A0A6P8IWY2_ACTTE (Phosphatidylinositol-3-phosphate phosphatase n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IWY2_ACTTE)

HSP 1 Score: 226 bits (577), Expect = 2.290e-62
Identity = 116/246 (47.15%), Postives = 161/246 (65.45%), Query Frame = 1 
Query:   22 IMDARHMISAKGHLIMGKGHE-VISRLGGRRQASLVFLEIPNIHAMQQGYSALVAACCAREDDQAWLLNLHNSRWLEYVGLILKGASDIAAYLEAGDPVLVHCSDGWDRTSQLVSLAQLMVDPFYRTIEGFEVLISKDWCSFGHRFATRSGYRVDPSGETAPIFLQFLDATQQLLRQFPEAFEFSEDLLLLLVHAYHSRWFNDFLHDNEYERVLAHVRCSAAGGTTASIWDHVRCRKERYRNVLWA 756
            I DAR +++A G+++MGKG E  ++R  G    +LV+L+IPNIHA++     L   C      + WL +L +++WL Y+  ILKGA+ IA ++E G   LVHCSDGWDRTSQL SLAQ+++DP+YRT  GF VLI K+W SFGHRF  R G+   PS + +PIFLQFLD   Q+ RQFP AFEF+ DL+L +    +S+WF +FLH+N  +R L  V  S     T S+W H+   +E  +N  ++
Sbjct:  600 IFDARSLMAASGNMLMGKGTEDTVNRYQG---CTLVYLDIPNIHAVRDSIERLQGVC-ESSSQKKWLSHLESTQWLAYIAAILKGATTIARFIEKGVSALVHCSDGWDRTSQLTSLAQILLDPYYRTFTGFLVLIEKEWISFGHRFRDRLGHPSCPS-QRSPIFLQFLDCVWQIYRQFPTAFEFTSDLILQIADHMNSQWFGNFLHNNVRDRHLTFVSRS-----TVSLWSHLYALQEEMKNTQYS 835
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BLAST of mRNA_H-paniculata_contig10536.350.1 vs. uniprot
Match: A7RIH6_NEMVE (Phosphatidylinositol-3-phosphatase (Fragment) n=3 Tax=Nematostella vectensis TaxID=45351 RepID=A7RIH6_NEMVE)

HSP 1 Score: 208 bits (529), Expect = 1.010e-61
Identity = 104/215 (48.37%), Postives = 141/215 (65.58%), Query Frame = 1 
Query:  118 SLVFLEIPNIHAMQQGYSALVAACCAREDDQAWLLNLHNSRWLEYVGLILKGASDIAAYLEAGDPVLVHCSDGWDRTSQLVSLAQLMVDPFYRTIEGFEVLISKDWCSFGHRFATRSGYRVDPSGETAPIFLQFLDATQQLLRQFPEAFEFSEDLLLLLVHAYHSRWFNDFLHDNEYERVLAHVRCSAAGGTTASIWDHVRCRKERYRNVLWAGT 762
            SLVFL+IPNIHA++     L A C      + WL +L +++WL Y+  ILKGA+ IA +++ G   LVHCSDGWDRTSQL  LAQL++DP+YRT  GF+VLI K+W SFGHRF  R G+   PS + +PIFLQFLD   Q+ +QFP AF+F+ + LL L    +S+WF +FL++N  ER  A +       TT S+W H+   K+ Y N ++  T
Sbjct:    5 SLVFLDIPNIHAVRDSLDRLQAVC-ESSSQKKWLSHLESTQWLAYIAAILKGATTIARFVDKGVSTLVHCSDGWDRTSQLTLLAQLLLDPYYRTFTGFQVLIEKEWISFGHRFRDRLGHPTCPS-QRSPIFLQFLDCVWQVHKQFPSAFQFTANYLLKLADHVNSQWFGNFLYNNVQERHHAFIT-----RTTVSLWSHLNAVKDNYTNSIYQPT 212
[Close]
BLAST of mRNA_H-paniculata_contig10536.350.1 vs. uniprot
Match: F0WE34_9STRA (Myotubularinlike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WE34_9STRA)

HSP 1 Score: 224 bits (571), Expect = 3.230e-61
Identity = 120/255 (47.06%), Postives = 167/255 (65.49%), Query Frame = 1 
Query:    1 RRTAVLRIMDARHMISAKGHLIMGKGHEVISRLG--GRRQASLVFLEIPNIHAMQQGYSALVAACCAREDDQAWLLNLHNSRWLEYVGLILKGASDIAAYLEAGDPVLVHCSDGWDRTSQLVSLAQLMVDPFYRTIEGFEVLISKDWCSFGHRFATRSGYRVDPSGETAPIFLQFLDATQQLLRQFPEAFEFSEDLLLLLVHAYHSRWFNDFLHDNEYER--VLAHVRCSAAGGTTASIWDHVRCRKERYRNVLW 753
            ++T +L+I+DAR  I+AK + + GKGHE + +    G   A + F+ I NIH ++  ++ L  A    ED   +   +  SRWLE+V  IL+GA ++A +LE G+PVLVHCSDGWDRTSQL SLAQ+M+DP+YRT+EGF +LI KDWCSFGH F  R G+    S +++PIFLQFLDA  QLL QFP  F+F+E  L ++  A +S WFN F  ++E ER  V+  V        + S+WD +R   ++YRN L+
Sbjct:  604 KKTFILQIVDARPEINAKSNALTGKGHESVKQYDRQGTPTACITFMGIDNIHVVRNSFTLLAQALYDVEDSN-FFNAIQKSRWLEHVCSILQGAIEVATHLERGEPVLVHCSDGWDRTSQLCSLAQVMLDPYYRTMEGFAILIEKDWCSFGHMFRKRCGHPT--SDQSSPIFLQFLDAMYQLLIQFPIHFQFNELFLSMIAEAVYSSWFNTFQMNSERERQVVIGLV-------PSLSVWDILRAATDKYRNPLY 848
[Close]
BLAST of mRNA_H-paniculata_contig10536.350.1 vs. uniprot
Match: T0QJT8_SAPDV (Protein-tyrosine-phosphatase n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QJT8_SAPDV)

HSP 1 Score: 223 bits (569), Expect = 3.770e-61
Identity = 118/257 (45.91%), Postives = 161/257 (62.65%), Query Frame = 1 
Query:    7 TAVLRIMDARHMISAKGHLIMGKGHEVISRLG--GRRQASLVFLEIPNIHAMQQGYSALVAACCAREDDQAWLLNLHNSRWLEYVGLILKGASDIAAYLEAGDPVLVHCSDGWDRTSQLVSLAQLMVDPFYRTIEGFEVLISKDWCSFGHRFATRSGYRVDPSGETAPIFLQFLDATQQLLRQFPEAFEFSEDLLLLLVHAYHSRWFNDFLHDNEYERVLAHVRCSAAGGTTASIWDHVRCRKERYRNVLWAGTGHE 771
            +AV+ I+DAR  I+AK + + GKGHE        G   AS+ F+ I NIH ++  ++ L  A   + DD  +   L  SRWLE++  IL+GA+++A++LE GD VLVHCSDGWDRTSQL +LAQ+M+DP+YRT+EGF +L+ KDWCSFGH FA R  +    S +T+P+FLQFLDA  QL  QFP  F+F+E  L  +  A ++ WF  F  ++E ER     R       T S+WD VR   E Y N L+    H+
Sbjct:  474 SAVVHIVDARPEINAKSNALAGKGHESAKHYDRDGVACASIAFMGIDNIHVVRTSFNVLSQALY-QVDDTTFFSTLQKSRWLEHITSILQGATEVASHLERGDAVLVHCSDGWDRTSQLSALAQIMLDPYYRTLEGFAILVEKDWCSFGHMFAKRCAFPT--SDDTSPVFLQFLDAVYQLTLQFPTHFQFNEMFLATVADAVYTSWFGTFQKNSEKER-----RAFLDTVATVSVWDAVRASTESYLNPLFNSERHD 722
[Close]
BLAST of mRNA_H-paniculata_contig10536.350.1 vs. uniprot
Match: A0A662X2G1_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X2G1_9STRA)

HSP 1 Score: 221 bits (564), Expect = 2.790e-60
Identity = 120/264 (45.45%), Postives = 170/264 (64.39%), Query Frame = 1 
Query:    1 RRTAVLRIMDARHMISAKGHLIMGKGHEVISRLG--GRRQASLVFLEIPNIHAMQQGYSALVAACCAREDDQAWLLNLHNSRWLEYVGLILKGASDIAAYLEAGDPVLVHCSDGWDRTSQLVSLAQLMVDPFYRTIEGFEVLISKDWCSFGHRFATRSGYRVDPSGETAPIFLQFLDATQQLLRQFPEAFEFSEDLLLLLVHAYHSRWFNDFLHDNEYERV--LAHVRCSAAGGTTASIWDHVRCRKERYRNVLWAG-TGHEEG 777
            ++ +++ I+DAR  ISAK + + GKGHE + +    G   A++ F+ I NIH ++   + L  A    ED   +   +  SRWLE+V  IL+GAS++A +LE GD VLVHCSDGWDRT+QL +LAQ+M+DP+YRT+EGF +LI K+WCSFGH F  R G+    S +T+PIFLQF+DA  QL  QFP  F+F+E LL  +  A +S W+  F  ++E ERV  L+ V       T+ S+WD +R   +++ N L+AG  G E G
Sbjct:  679 KKNSIVHIVDARPEISAKSNALAGKGHESVKQYDRDGVPTAAITFMGIDNIHVVRNSLAGLAQALYEVEDSN-FFGAVQKSRWLEHVCSILQGASEVATHLERGDAVLVHCSDGWDRTAQLAALAQIMLDPYYRTLEGFAILIEKEWCSFGHMFQKRCGHPT--SDQTSPIFLQFIDAVYQLTLQFPTHFQFNELLLASVAEAVYSSWYGTFQKNSECERVEFLSTV-------TSVSVWDVIRATTDQFLNPLFAGGEGQEMG 932
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10536.350.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL65_ECTSI8.610e-12570.72Phosphatidylinositol-3-phosphatase n=1 Tax=Ectocar... [more]
F0Y8Q0_AURAN1.400e-7245.86Myotubularin phosphatase domain-containing protein... [more]
A0A812RUA9_SYMMI3.600e-6453.74MTMR4 protein n=1 Tax=Symbiodinium microadriaticum... [more]
A0A1V9Y998_9STRA2.160e-6346.48Protein-tyrosine-phosphatase n=1 Tax=Achlya hypogy... [more]
UPI000A2A85A75.990e-6347.76uncharacterized protein LOC110238220 isoform X1 n=... [more]
A0A6P8IWY2_ACTTE2.290e-6247.15Phosphatidylinositol-3-phosphate phosphatase n=1 T... [more]
A7RIH6_NEMVE1.010e-6148.37Phosphatidylinositol-3-phosphatase (Fragment) n=3 ... [more]
F0WE34_9STRA3.230e-6147.06Myotubularinlike protein putative n=1 Tax=Albugo l... [more]
T0QJT8_SAPDV3.770e-6145.91Protein-tyrosine-phosphatase n=2 Tax=Saprolegnia T... [more]
A0A662X2G1_9STRA2.790e-6045.45Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10536contigH-paniculata_contig10536:3054..8476 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score385.6
Seed ortholog evalue2.9e-104
Seed eggNOG ortholog2880.D8LL65
KEGG koko:K01104,ko:K18081
KEGG Pathwayko00562,ko01100,ko04070,map00562,map01100,map04070
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity
EggNOG OGsKOG4471@1,KOG4471@2759
Ec32 ortholog descriptionProtein-tyrosine phosphatase-like
Ec32 orthologEc-24_002770.1
EC3.1.3.48,3.1.3.64,3.1.3.95
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009
Exons4
Model size1218
Cds size1194
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10536.350.1prot_H-paniculata_contig10536.350.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig10536 3054..8452 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928756.9403958-CDS-H-paniculata_contig10536:3053..36571622928756.9403958-CDS-H-paniculata_contig10536:3053..3657Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10536 3054..3657 -
1691480607.5229194-CDS-H-paniculata_contig10536:3053..36571691480607.5229194-CDS-H-paniculata_contig10536:3053..3657Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10536 3054..3657 -
1622928756.9525735-CDS-H-paniculata_contig10536:4465..46651622928756.9525735-CDS-H-paniculata_contig10536:4465..4665Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10536 4466..4665 -
1691480607.5340464-CDS-H-paniculata_contig10536:4465..46651691480607.5340464-CDS-H-paniculata_contig10536:4465..4665Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10536 4466..4665 -
1622928756.9644558-CDS-H-paniculata_contig10536:7030..72131622928756.9644558-CDS-H-paniculata_contig10536:7030..7213Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10536 7031..7213 -
1691480607.5414853-CDS-H-paniculata_contig10536:7030..72131691480607.5414853-CDS-H-paniculata_contig10536:7030..7213Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10536 7031..7213 -
1622928756.9741051-CDS-H-paniculata_contig10536:8245..84521622928756.9741051-CDS-H-paniculata_contig10536:8245..8452Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10536 8246..8452 -
1691480607.549229-CDS-H-paniculata_contig10536:8245..84521691480607.549229-CDS-H-paniculata_contig10536:8245..8452Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10536 8246..8452 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928756.9879353-UTR-H-paniculata_contig10536:8452..84761622928756.9879353-UTR-H-paniculata_contig10536:8452..8476Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10536 8453..8476 -
1691480607.5574815-UTR-H-paniculata_contig10536:8452..84761691480607.5574815-UTR-H-paniculata_contig10536:8452..8476Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10536 8453..8476 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig10536.350.1

>prot_H-paniculata_contig10536.350.1 ID=prot_H-paniculata_contig10536.350.1|Name=mRNA_H-paniculata_contig10536.350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=398bp
MDARHMISAKGHLIMGKGHEVISRLGGRRQASLVFLEIPNIHAMQQGYSA
LVAACCAREDDQAWLLNLHNSRWLEYVGLILKGASDIAAYLEAGDPVLVH
CSDGWDRTSQLVSLAQLMVDPFYRTIEGFEVLISKDWCSFGHRFATRSGY
RVDPSGETAPIFLQFLDATQQLLRQFPEAFEFSEDLLLLLVHAYHSRWFN
DFLHDNEYERVLAHVRCSAAGGTTASIWDHVRCRKERYRNVLWAGTGHEE
GPKQQEEEEDNRKEMRYLSSAPPAPLPSSTAEIFQNAAAAAAATSVTVAT
DVSPSSSGGQSTAEIRSSSGCDGRKPGGESGGERAGGNSMAGVATIRTAS
ASDLRPSRVFLSLPLWPACGVRSLVVWHRLYSSRGLEVSELVFFLVV*
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mRNA from alignment at H-paniculata_contig10536:3054..8476-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10536.350.1 ID=mRNA_H-paniculata_contig10536.350.1|Name=mRNA_H-paniculata_contig10536.350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5423bp|location=Sequence derived from alignment at H-paniculata_contig10536:3054..8476- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGTAGGACGGCTGTGCTAAGGATTATGGATGCTAGACACATGATATCTGC
TAAGGGCCATCTCATCATGGGGAAGGGACATGAGGTTATATCTCGACTGG
GTGGGCGCCGACAGGCATCTCTCGTCTTTCTGGAGATTCCAAATATCCAT
GCGATGCAGCAGGGGTACTCAGCACTAGTGGCGGCGTGCTGTGCTCGCGA
GGACGATCAGGCGTGGCTACTTAACCTGCACGTGAGTTTGGTTTGCGATG
AAAGTAGCCCAGGTTTCGGAAATTATACCCCACAAGGCTAAGGAAGGCGC
TCCTTTTCTTTGCGGGGGTACAACTGACTAACTAAAGCACTAACTAATTT
GCGCCGTTTTTTTTTTCTTTTTTTTTTTCTGCCATGTTAAGTCGTAAAAA
TATCATTGGCCCAAAAAGCATTATTTATTATTAGGCACGCAGTAGGTGGT
AGTATTTTTCTTTGGTATATTCATTGTTGGAGTGTTTTTTTGTTCTTGTC
TTTTTTCATTCAAATTTTTATGGTTGGTAAGTTTATCTTCAAAACCGGCC
TTGTAACTTATGATGATTTCGTCGCTATTTTAGTTTATTACTATATACTG
AGTAGCTTCACGACATCACTCTGGGGTTTGGGGTGTTTAAGTTCTTGTAT
CGAAATGGCGTTTTTACTCCTAGAATCAGCCTGTCCCACTTTGTAGGGGC
CGCCCACAGTAGGTCGATCCTCCACAGTCGACCATACATGTCTAAAATAG
GGGCTACGAGTCACCCCCCCCCCCCCTTCGTTTTTGGGCTAAGAACGGCT
TTGGGGGCATGGCTCCAGAATTGAGAGTTACCACGGGCCCCTTGAGGGAC
CGGTGGGAATTAAATGTGCAACACCGTTGCGCACAACAAATGTCTGTGCT
CTAGTCTTGCCATGATTACTGCGGTGCGCTTCTGTCATCTTGGCTGCCAC
AACCATTACCTCCACAAAAAGACTACGTACGGACTGCGCGTGGTGTTCTC
TCCCAAGATCGCCTCCGCTTCCTTCGCAACCATACTCGCCCACGGGAACT
GTCAACATGTTTTTGGTATTTACTCGCGATCAGGAGGGTTGATGGTCTAA
CAAGTAGCTATAACAGGCAAGCAAACCTTGAGTATGGCAGTCCTTCCCTC
CCTCCACGCCTCCCCACCCCCCTTAAACTCTCCTTTCCCCGAGCCGCCAC
AGCCAAGTGAATCCGCATTTTTTTTTTGTTTGAATGTTGAATGCTTTGAT
CACCTCTGCGTAGAACTCTCGTTGGCTGGAGTACGTCGGTCTGATTCTCA
AGGGCGCCTCGGATATCGCCGCTTATCTCGAGGCTGGGGATCCTGTGTTG
GTGCACTGCAGCGATGGATGGGATAGGACCTCTCAGCTCGTGTCTTTGGC
GCAGCTTATGGTGGATCCCTTCTACCGCACGATTGAGGGCTTTGAGGTAT
ATATTCACTTTTTATTTATTATTTATTTTAGTTTATTATTTTATTTATAT
TTCTTAAATACGCAATGAAAAAAAAAAAAACGCAAAAATTGAAAAGTTGA
CGTCTGGCTTCTTTTTTTTTTTTGGCGCAGTTGCATTGAAATATCAAGAT
TACTTTCTATTGTTACTATATTTTTCACGAAAAAAAAAAAATGTTTTTTT
TTTTTTGTGACTTTCGATTTTTGGTTCGATTTTGGCAAACAGTGAGCTTC
AAGTCCCCATCCTCAGTCCAGCTGCACCAACAGGGTGATTTGTTTAAGAC
GATTGTTTTGTTTCTTTTCGCGAGTTTTACGAACTCTGACGGTCTCCATT
GATCAGTTGTGTCGACCCTCAACGGATGTTGTTCTGGTTCGGTTGCAATA
CAGGCAGGTGCACGTCGACCTACCAGCTGTTCATATGACTCCTCATCTGT
CAACTACCATTTTTTTTTTTTTAAAGCTGTCCCTAAGCAGCCTTTCGGTT
TTGGCCTGGCTTCTATTTCTCAGCTTGTAGGATATTTCCAGCGCTAATTG
GTAAGTAGTATGCGTGAAAAGTCCTTGAAGGCGGTTTTGTGTCCGACAGG
AATATACTTGGATTTGCAGCCGGATTACCCTCGAAAAGTAGTATAAAATG
AATTTGTCTAAAAAATTCTCGAAGCGCTTTAAAAGAGAGTATGTTTCGTA
CGGTTTGTAGACCTTGACTGTATGGATTTGGTGGTATTAGTGTCATGGCA
TGAAACGTTGGCTGTGAAAATTTGAATGCACATCCAAAACGGTACTAACA
GCAAGGACGTTGTAAATTGTAAAAATGATTGTAAGTGGGCGCCGGCGTGA
CGCCACTTCAGCCGGGGATCTTGTATGCCTTTTATTCCTAACCGAATCAA
GTCCGATATTCCGTCCTGTTACTACCTCTTTAGTGTTGTTCTCATCAGCC
TGGCATTGGAATCTTGCCGTCGCGGATGCTGTATGTTGGGAGACATTTTT
TTTGTCGGTAGTGGAATTAAATCTGATAGTCGTTCTTGAATCAGTTTGGT
TGGCCGTATGCAGTGTGTATTCATTTTCCTTTTTTAACCCCCGAAAGGCT
GAGGCGAAAACCTTTATCCGATGCTTCCATACGGAAGTATTTTACCAAAG
TATGCCTACATTTCCTTTAACAGAAGAGAGTTATTTGTTCCTCTGCGGGG
TAGGCGCCACCCCGGTTCGGCTGAACCAGGTAGGCAGTGTGGGGGTTGCA
CCCATCTAAAGACCTCTGACTAGACTTCCGGTCATGCTCAGTTCACGAGC
TGCCCTACCCTTTCGGGCGTAGGTCCGTGCAGTGTGTATTCATGTACTGT
ACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTGT
ACTGTACTGTACTGTACTGTACTGTACTGTACTGTCCCCCCTCGTCTCTT
GAGAAAGGCCAGCCAACACACACGGAAAAAACGCTGATTGACGAAAACTG
GTTCATTTTTTTAACGTAGGGTGAATTTGGACGGGATTTTTTATTTCGTG
GATTCAAGTCACCGTCGGCCTTTTGTCATGTATGTATGCGTCAAATCGTT
TTTGGTGCCCTTCGAAAAAATTTGAACGTTCACACAAAAAAGTTTACATA
TTTTGCTAGTAGTACAGAAAGAGCCCACGCCTTAAAAATCAAATTTCGGA
CGACGATGAGAAACAGCCTTAGTATTATTGAAATAACTGGCCATGCCGCC
CGATTTCGATTGATGGAGGCATGTTTTCTTGAATGTATTTGTTGTACATG
TTTCAAGCCGTACATTCCCTCCCTTTAATTGGTTCAGTCTGTGTATAATA
ACCAAGTATTCCAGTAGCTTGAAGATGCTGACCATGCCTCCAAAGTATTT
TTAGGGGTATTGTCATGTTTACTACACCCTTCCACCGATAACCCTCGATG
ATCAAAACCCTTCGATTATCATAAGAGCCGGGTGTATCGCACCAGGGTAA
GAACGTTTGTCAAACGCGATTGACTATCCCCGAGAACCGAGACTTCACGC
CGCCCGAGAAACGTCAATCGATAAGACAGATCTCCGCAACATCTTTCCAA
TAGCACACTTATTCATCGTTAGCACCTTGTAAGACCGTAGCTGTTGAGAT
AGCCAACCATGGTATTTTTGAAAAACGTTGGCACCCGGTGATGTCGATAC
CTCGCTGGGGGTTTTACGGTAGCCGTCGGAGATCGTTATGACAAGCAGAA
AAGTTCCGTCCTCTCCAAGATGCGTGGTCAATAAATAATCTAAGGACTAC
GGTGTGTAAACTGCGACTATCCCTCCCCCGCGCACCCGACTCATTCTCCG
GCGTGTACCAGGTGCTCATTTCGAAAGATTGGTGTAGTTTTGGTCATCGA
TTTGCCACGCGCAGCGGGTACCGGGTGGACCCTAGCGGAGAGACGGCACC
CATATTCTTGCAGTTTTTGGACGCAACGCAGCAACTTTTGAGGCAGTTTC
CAGAAGCGTTTGAGTTCTCCGAAGATCTCCTTCTTTTGTTGGTACATGCC
TACCACTCCAGGTGGGTCCTGTTGTGGATAATGACCTGTTCACTTGTCGT
TGTTGTTGTTGTTGGTTGGCCCATCAAATTTTTTAATAGTGCTCTCACCA
ATTCGAAACCGTATCCTGTCTGGGGGCACTTGAACATTTTGACATGTTGA
TGCTACTCGATCGGTCGACACTTTCCTCGGTAAGAGATTAGCTTACTCCC
GCAAGAAAATCAGCTTGCTTCTACTTTTGAGTCGGGTCCCCGTAGCGGGG
AGTGGGCGAAGGAGTGATTTGAACCAACTTGTCTTACGGTTTGAGCCGAT
TTGCGAAGCGGTTACACGCTCGTCGCAGCAAGACCTTTCAGATTTCGTCG
TCCCGTGTTTTTTTAAGACCACACCATGCATGTGTGACTCCAAGATTGTT
GAGAACACATATTTAACCATTTCGTTACTCTTACGGAGACTAACACCGGG
CTGACACGAGAAAAATGTTGGAATATCATTCAATATACTCTCCAAAAGTC
CCTACAGAGACGAGCCACATTTGGCAATAACATAGGAAAGAGCTATTGGC
CACCGGAAATCGCTCTGATAGAAACAAAGCTCCGTCTTGCCCAGGACGCG
TAGTCAACCGTTTAACATCTGCAGCATGCAAACTATGACTACCACCCCCC
CAAATTGTTTTTTGTCCACGTTCCGTTTTTTTTTTTTTATTTGACTTTTC
CTGCCGTGGCCAAGCAAAACACGACAAACCAGAACAAAGCCGATTTTCTC
CAACCAACGTATGTCTCTTGCGTGTCCTTGTGTGTATTGAAATGAAATGT
GGCGACTAAAACAAGTAAGGTGGTTCAACGACTTCCTGCACGATAACGAG
TACGAGCGGGTACTTGCGCATGTGCGGTGTTCCGCAGCTGGCGGAACAAC
GGCATCGATTTGGGATCACGTCCGCTGCCGCAAAGAACGTTACCGGAACG
TTCTTTGGGCTGGAACGGGGCACGAAGAAGGACCAAAGCAACAAGAAGAG
GAAGAAGATAACAGAAAAGAAATGCGCTACTTGTCATCAGCACCTCCAGC
ACCACTGCCATCGTCAACTGCGGAAATATTTCAGAATGCTGCTGCTGCTG
CCGCCGCTACTTCTGTCACTGTTGCTACGGACGTTAGCCCTTCTTCGTCG
GGCGGTCAATCGACAGCAGAAATTAGGTCATCCTCCGGTTGTGATGGGAG
AAAGCCGGGCGGTGAGAGCGGAGGGGAGAGGGCGGGGGGGAACTCCATGG
CAGGAGTTGCAACGATACGTACTGCCAGTGCGAGCGATTTGCGGCCATCT
CGTGTTTTTCTATCCCTGCCGCTGTGGCCTGCGTGTGGCGTGCGGTCGCT
TGTTGTGTGGCATCGCTTGTATTCCAGTAGAGGGTTGGAGGTGAGTGAGC
TCGTTTTTTTTTTGGTTGTGTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig10536:3054..8476-

>mRNA_H-paniculata_contig10536.350.1 ID=mRNA_H-paniculata_contig10536.350.1|Name=mRNA_H-paniculata_contig10536.350.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2388bp|location=Sequence derived from alignment at H-paniculata_contig10536:3054..8476- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGATGCTAGACACATGATATCTGCTAAGGGCCATCTCATCATGGGGAA
GGGACATGAGGTTATATCTCGACTGGGTGGGCGCCGACAGGCATCTCTCG
TCTTTCTGGAGATTCCAAATATCCATGCGATGCAGCAGGGGTACTCAGCA
CTAGTGGCGGCGTGCTGTGCTCGCGAGGACGATCAGGCGTGGCTACTTAA
CCTGCACATGGATGCTAGACACATGATATCTGCTAAGGGCCATCTCATCA
TGGGGAAGGGACATGAGGTTATATCTCGACTGGGTGGGCGCCGACAGGCA
TCTCTCGTCTTTCTGGAGATTCCAAATATCCATGCGATGCAGCAGGGGTA
CTCAGCACTAGTGGCGGCGTGCTGTGCTCGCGAGGACGATCAGGCGTGGC
TACTTAACCTGCACAACTCTCGTTGGCTGGAGTACGTCGGTCTGATTCTC
AAGGGCGCCTCGGATATCGCCGCTTATCTCGAGGCTGGGGATCCTGTGTT
GGTGCACTGCAGCGATGGATGGGATAGGACCTCTCAGCTCGTGTCTTTGG
CGCAGCTTATGGTGGATCCCTTCTACCGCACGATTGAGGGCTTTGAGAAC
TCTCGTTGGCTGGAGTACGTCGGTCTGATTCTCAAGGGCGCCTCGGATAT
CGCCGCTTATCTCGAGGCTGGGGATCCTGTGTTGGTGCACTGCAGCGATG
GATGGGATAGGACCTCTCAGCTCGTGTCTTTGGCGCAGCTTATGGTGGAT
CCCTTCTACCGCACGATTGAGGGCTTTGAGGTGCTCATTTCGAAAGATTG
GTGTAGTTTTGGTCATCGATTTGCCACGCGCAGCGGGTACCGGGTGGACC
CTAGCGGAGAGACGGCACCCATATTCTTGCAGTTTTTGGACGCAACGCAG
CAACTTTTGAGGCAGTTTCCAGAAGCGTTTGAGTTCTCCGAAGATCTCCT
TCTTTTGTTGGTACATGCCTACCACTCCAGGTGCTCATTTCGAAAGATTG
GTGTAGTTTTGGTCATCGATTTGCCACGCGCAGCGGGTACCGGGTGGACC
CTAGCGGAGAGACGGCACCCATATTCTTGCAGTTTTTGGACGCAACGCAG
CAACTTTTGAGGCAGTTTCCAGAAGCGTTTGAGTTCTCCGAAGATCTCCT
TCTTTTGTTGGTACATGCCTACCACTCCAGGTGGTTCAACGACTTCCTGC
ACGATAACGAGTACGAGCGGGTACTTGCGCATGTGCGGTGTTCCGCAGCT
GGCGGAACAACGGCATCGATTTGGGATCACGTCCGCTGCCGCAAAGAACG
TTACCGGAACGTTCTTTGGGCTGGAACGGGGCACGAAGAAGGACCAAAGC
AACAAGAAGAGGAAGAAGATAACAGAAAAGAAATGCGCTACTTGTCATCA
GCACCTCCAGCACCACTGCCATCGTCAACTGCGGAAATATTTCAGAATGC
TGCTGCTGCTGCCGCCGCTACTTCTGTCACTGTTGCTACGGACGTTAGCC
CTTCTTCGTCGGGCGGTCAATCGACAGCAGAAATTAGGTCATCCTCCGGT
TGTGATGGGAGAAAGCCGGGCGGTGAGAGCGGAGGGGAGAGGGCGGGGGG
GAACTCCATGGCAGGAGTTGCAACGATACGTACTGCCAGTGCGAGCGATT
TGCGGCCATCTCGTGTTTTTCTATCCCTGCCGCTGTGGCCTGCGTGTGGC
GTGCGGTCGCTTGTTGTGTGGCATCGCTTGTATTCCAGTAGAGGGTTGGA
GGTGAGTGAGCTCGTTTTTTTTTTGGTTGTGTAGGTGGTTCAACGACTTC
CTGCACGATAACGAGTACGAGCGGGTACTTGCGCATGTGCGGTGTTCCGC
AGCTGGCGGAACAACGGCATCGATTTGGGATCACGTCCGCTGCCGCAAAG
AACGTTACCGGAACGTTCTTTGGGCTGGAACGGGGCACGAAGAAGGACCA
AAGCAACAAGAAGAGGAAGAAGATAACAGAAAAGAAATGCGCTACTTGTC
ATCAGCACCTCCAGCACCACTGCCATCGTCAACTGCGGAAATATTTCAGA
ATGCTGCTGCTGCTGCCGCCGCTACTTCTGTCACTGTTGCTACGGACGTT
AGCCCTTCTTCGTCGGGCGGTCAATCGACAGCAGAAATTAGGTCATCCTC
CGGTTGTGATGGGAGAAAGCCGGGCGGTGAGAGCGGAGGGGAGAGGGCGG
GGGGGAACTCCATGGCAGGAGTTGCAACGATACGTACTGCCAGTGCGAGC
GATTTGCGGCCATCTCGTGTTTTTCTATCCCTGCCGCTGTGGCCTGCGTG
TGGCGTGCGGTCGCTTGTTGTGTGGCATCGCTTGTATTCCAGTAGAGGGT
TGGAGGTGAGTGAGCTCGTTTTTTTTTTGGTTGTGTAG
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