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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Model size | 2356 |
| Cds size | 471 |
| Stop | 1 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10516.336.1 >prot_H-paniculata_contig10516.336.1 ID=prot_H-paniculata_contig10516.336.1|Name=mRNA_H-paniculata_contig10516.336.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=157bp
SSYTKYTNSSGSYSYDDYFTDDWTWDPNGNYTDSYLALDLTYTAPEADYL
YGSASWWYNHPNETVMTGAWEADEVRTSTVFRGYDGSWGEDFTLQSLSGH
YIGVDGGDTVGIHREHSGYGPSHRYRGGHNSSFPEGIDCMVAGFLTYHIP
AVEDAV* back to topmRNA from alignment at H-paniculata_contig10516:4..3446+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig10516.336.1 ID=mRNA_H-paniculata_contig10516.336.1|Name=mRNA_H-paniculata_contig10516.336.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3443bp|location=Sequence derived from alignment at H-paniculata_contig10516:4..3446+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCGTCGTACACCAAGTACACCAACTCTTCTGGATCGTACTCCTACGATGA
TTACTTCACGGACGACTGGACTTGGGACCCCAACGGGAACTACACGGATA
GCTACGTGAGTATCAAAGTGACTCCACCGGATGGCGCTGACAGTACTCGT
CAGAATGCTTGATATGGTCGTAGATCGGGACCCTGCCTCTCGATGATAGA
ATGAAATGATGTGCTGGTTATGCCCCACCTGCTGACCGGGCTGTGTTTAG
CAAGTTGCCGTAAGCAATGGAGACATGAACAATGTAGTTCGAATATCTAG
ATGTCCTCTGTCTAGACAGCAGATCACGAGACATGTAAGACAGCATATTT
CCTCTGCAATGTCAACGGTAGCATACGAATCCAGATGAACATGAGCGCAC
GAGAAGTCTTGGAGGTAAACACAATGACCACACCCCCTCTCTTGCAGTGC
CAAGTTGGTTCTCTGGACGTTGCTTTGCCGCACTTTTACACATGCGTACC
CACCTTACTTGTGTACCGATCTCGGCAGCTGGCATTGGACCTGACCTACA
CTGCGCCCGAGGCTGACTACTTGTACGGATCTGCTTCTTGGTGTGAGTGC
CCGTTCATTATTTTGATATTTATTATGGGCTCGTTTCGTATTAGTTGGCA
TAGGCACGTTGTTGGGCGCAGAAAACAAGTCGTTTATTAGGGCACGAATT
GTTGCGTGTGCTCATGGACACCACAGTATCCTTACTGATGTTTCCGTTTG
ACATTTCTCAACGTCAGGAAAGTAATCAAGCCAAACTGATTTTTTTTTTG
GTGGCCAAATTGTTTTGAAGCGTCGTGAGGTGTATCTATGCTTGCTTGAT
TGAAGAACAAATCTGGCCGTGATGGACCAGACAAACTAAAGTCCAGGGAA
TCTGGCTCTTATATTTCAACTTGCCAGGGTACAATCACCCGAACGAGACT
GTAATGACCGGGGCTTGGGAAGCTGACGAAGTGCGGACGTCAACGGTATT
CCGCGGCTACGACGGTAGCTGGGGAGAGGACTTTACCCTTCAGAGCTTGT
CTGGGTGAGTCCCCTTTTTCTTCCGTTAAACAAGTCTGGGCTTTTTTTGA
CCAACTTGTGGGAAATTGTAACATCCTTGCGCTCTCAACAATAGTTTGAT
GTAATCCAACAGTCTCCCCACCGCGGCGGCCGGGCACGGTCCAGCGTCAT
AGTCATGCTGAGCACGGGGCTGAGGGTGTTGTTGGGGCATCGCTCGTCTG
TTCTCTCGGAGGTATGTTCATGTGAGAGCGTCCTCTAATCTAGCTCGATA
ATTTTGAGCGTTGCTTCGGGCTTCCGTTCGTGAAACTTTATTCTTGATTC
ACAAGCGTGCATTTGTTTTTTGTTGCGGGGGGCAGGCACTACATCGGAGT
AGATGGGGGCGACACCGTCGGTATCCACAGGGAGCACTCTGGCTACGGAC
CTTCGCATCGCTACCGTGGTGGGCACAACAGCTCTTTCCCTGAGGGCATT
GACTGCATGGTTGCCGGTTTCCTGACCTACCATATCCCTGCCGTCGAAGA
CGCTGTCTAAATTGGGCGCTTTCTTCTGAATAGTGCACGGAGTTCTTATT
ATGCGAAATCGCTCATGTTTTAAAGACGGCGGAGGGGGGGAATCGACAGC
ACAACATCGGAAAAAACTATCGTGGCTAGGCGGGGTGGCGTGGGGTTGGG
AATATATTGGTTAGATTTTGACAGATGGTATCGGATTTATGCCTCTGTTT
TCCATCTCTTTCGTAGCGCAATGGGTATCGGTTGGATAATATTGTAGCCT
AATCGGTGTCATTTGCGCTAGTATTAGCCATCTGTTGGAAGTAACATATG
CCCCCAATTGTGGAAACTACAGCAAAGGAAATATGGGAACGCTGGGAACA
CTTTCCATTTCGTGATACCCTAGATGAAAATGGAGCACGCATTTTGTTTT
TTGCCGATCGTGAATAAAAATAGTTACGACCATTCTAAACGAATTTAAAC
AAATGTGCGTATCAAATGTTCCTTACTCTGGGAGGCCGGAATTTTTTCTG
GGAAATGTGATGCGTTTGGAGATCACGTACAGTATTATAGTCTCGGACAC
GTTGTCTCTTTTCCCCGTGACATCGGACACGGAGCGAAAGCAGAAAAAAT
ACCGACCAGTCTCGTGGTGCAAACGCCGGGAAGAGGAAGTATGACTTCTA
GTGTTGCAAGAATAACTAGTATGAGTACATATAGCCATAATTACACAAAC
ATAATCGTTGGGTAAAGTCACTACGTAACGTTGATCATAGCTGAAGGGGG
AAGAGTCGAAGAAAGGAACGAAAATTCTTTGGTACGCGAACGATGGAATC
CCTTTCGATAAAGTGGATAAACGATCAGAAGAGGCCAGATAACAGGTGGA
GTAGAAAACAGAATAGTAAATGGCCCACTCCTTCGACGTTTGATTACATA
ACTCTTTGTGCCAATTCCTAAGAAAAAAGGGAATGATCGGCGACGATCAG
ACGTTCCACATTTAAACCACGTTCCGAAGAAAGTAACGCCTGTATCATAT
ACCCAAGAGTTGATATTGCCTACATTGTACACAAAGTAGTGCCGTGTCAA
CGTACCAAACAGAATGTTCGTAAGATGGAGAATCTATTTTCAAGAAGAGA
ACGGGGCATATGATGAACTGCATAATAGTAGGAGCCGAACGATATTTTTG
TGAATGGTTTTCAAATGGCCGAACTTGGGAAGGCGGCACTCTCACTCATT
CGTGGATTGAAAGTGAGCGGTGAGCAAAAAACCTAGAGGTGATTGATCGA
TATTCTTGTGAAACCTCTTTTGTGTATGTATGTATTATGTACTACAGATA
CGGTCTCAAAATATCTCCCGTTCTCTTGAGAGTTTCTATCTCCCGTTACC
AAAAGATGGATGACACAGGTGTCGCATAACTCAGCCAACTATTTTCACCC
TGCCAGAAGAGAAGTATACATTTATATTTGTTTCTGTTTGTAGCACATCA
TTAGAAGAGCGCAGACCTACTGTGACCCACCTAACTATGGAATTTATGGA
GTAGGATGTTGCCGTTGGCGTCGTTCATATGTATATACCCTGAACAGATG
ATATCGGAGATTGGGAGTCAATTTTCATGTTAACTTTGAGGGATGTTGAA
TTTGAGTGATATATTTGGGAAACAATCCCGTCCGAATGTTTACCGCCTTT
ACGTGGCGGACGGGATTAACTCACCCCGGGGTAAACCCCAGGTTGATGGG
GGTGAGGCCAAGAGTAACCGCCGGATCATTCAAGACCACCAGCAAGCTTG
CAGTCATAGGTCTGGTAAGTTTTGGGGAACCAGTAGTCACTCAGGAAGAG
TAAGAAAACGACCGCGCCGTGAGGGTCTGAGTGAGACACTGTGGAGAAAG
ACTTCAAGGTCTGAGACGGGAGACAAGTGACTTCTTCCGGGTG back to topCoding sequence (CDS) from alignment at H-paniculata_contig10516:4..3446+ >mRNA_H-paniculata_contig10516.336.1 ID=mRNA_H-paniculata_contig10516.336.1|Name=mRNA_H-paniculata_contig10516.336.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=942bp|location=Sequence derived from alignment at H-paniculata_contig10516:4..3446+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCGTCGTACACCAAGTACACCAACTCTTCTGGATCGTACTCCTACGATGA
TTACTTCACGGACGACTGGACTTGGGACCCCAACGGGAACTACACGGATA
GCTACTCGTCGTACACCAAGTACACCAACTCTTCTGGATCGTACTCCTAC
GATGATTACTTCACGGACGACTGGACTTGGGACCCCAACGGGAACTACAC
GGATAGCTACCTGGCATTGGACCTGACCTACACTGCGCCCGAGGCTGACT
ACTTGTACGGATCTGCTTCTTGGTCTGGCATTGGACCTGACCTACACTGC
GCCCGAGGCTGACTACTTGTACGGATCTGCTTCTTGGTGGTACAATCACC
CGAACGAGACTGTAATGACCGGGGCTTGGGAAGCTGACGAAGTGCGGACG
TCAACGGTATTCCGCGGCTACGACGGTAGCTGGGGAGAGGACTTTACCCT
TCAGAGCTTGTCTGGGGTACAATCACCCGAACGAGACTGTAATGACCGGG
GCTTGGGAAGCTGACGAAGTGCGGACGTCAACGGTATTCCGCGGCTACGA
CGGTAGCTGGGGAGAGGACTTTACCCTTCAGAGCTTGTCTGGGCACTACA
TCGGAGTAGATGGGGGCGACACCGTCGGTATCCACAGGGAGCACTCTGGC
TACGGACCTTCGCATCGCTACCGTGGTGGGCACAACAGCTCTTTCCCTGA
GGGCATTGACTGCATGGTTGCCGGTTTCCTGACCTACCATATCCCTGCCG
TCGAAGACGCTGTCTAAGCACTACATCGGAGTAGATGGGGGCGACACCGT
CGGTATCCACAGGGAGCACTCTGGCTACGGACCTTCGCATCGCTACCGTG
GTGGGCACAACAGCTCTTTCCCTGAGGGCATTGACTGCATGGTTGCCGGT
TTCCTGACCTACCATATCCCTGCCGTCGAAGACGCTGTCTAA back to top
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