mRNA_H-paniculata_contig10335.221.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10335.221.1 vs. uniprot
Match: A0A4Y9ZY34_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZY34_9AGAM) HSP 1 Score: 123 bits (308), Expect = 3.500e-30 Identity = 60/117 (51.28%), Postives = 77/117 (65.81%), Query Frame = 1 Query: 4 LNGGARSWCSRKQQFVACSSTEAEYVAAGETGKETVHLRDLLGSIGFGCRRSKTLFEDNKRAINLSKGSGAHCRTKHIRVRWHGIREWVQEGILALKYVQTGDQLADILTKGLSRVK 354 L GGA SW S+KQ A SSTEAEY+AA KE LR LG IG C+ + L DN+ A+ +++ H RTKHI VR+H +RE V+ G + L+YV TGDQ+AD+LTKGL + K Sbjct: 1008 LAGGAVSWSSKKQNTTALSSTEAEYIAAAHAAKEATWLRTFLGEIGRPCKTATLLLMDNQSAMAIARNPAFHARTKHIDVRYHFLREKVEAGAINLQYVPTGDQVADVLTKGLVKAK 1124
BLAST of mRNA_H-paniculata_contig10335.221.1 vs. uniprot
Match: A0A427XXX1_9TREE (Uncharacterized protein n=2 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427XXX1_9TREE) HSP 1 Score: 110 bits (275), Expect = 3.030e-28 Identity = 54/113 (47.79%), Postives = 71/113 (62.83%), Query Frame = 1 Query: 4 LNGGARSWCSRKQQFVACSSTEAEYVAAGETGKETVHLRDLLGSIGFGCRRSKTLFEDNKRAINLSKGSGAHCRTKHIRVRWHGIREWVQEGILALKYVQTGDQLADILTKGL 342 L G A W SR+Q VA S+ EAEYVA E +E V L+ LL +G + L+ DN+ AI L++ G H RTKHI +RWH IRE +++G++ L YV T Q+ADI TK L Sbjct: 39 LGGSAIVWTSRRQATVASSTVEAEYVAVSEAAREAVWLKGLLDELGVTPKEPTPLWCDNQGAIRLARNPGTHRRTKHIAIRWHLIRELIEDGVVRLGYVPTASQVADIFTKAL 151
BLAST of mRNA_H-paniculata_contig10335.221.1 vs. uniprot
Match: H3G6B1_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G6B1_PHYRM) HSP 1 Score: 108 bits (270), Expect = 4.450e-28 Identity = 55/119 (46.22%), Postives = 79/119 (66.39%), Query Frame = 1 Query: 4 LNGGARSWCSRKQQFVACSSTEAEYVAAGETGKETVHLRDLLGSIG-FGCRRSKTLFEDNKRAINLSKGSGAHCRTKHIRVRWHGIREWVQEGILALKYVQTGDQLADILTKGLSRVKF 357 +NGG SW S+KQ+ VA SSTEAEY+A E KE V L+ L +G + ++EDN+ +I L+K H RTKHI +R+H +RE V++G + L+YV T D LAD++TK ++ V+F Sbjct: 2 MNGGCISWRSKKQRTVALSSTEAEYMALSEATKEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAITAVQF 120
BLAST of mRNA_H-paniculata_contig10335.221.1 vs. uniprot
Match: A0A4Z0A7X3_9AGAM (Uncharacterized protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0A7X3_9AGAM) HSP 1 Score: 111 bits (277), Expect = 6.160e-28 Identity = 56/117 (47.86%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 4 LNGGARSWCSRKQQFVACSSTEAEYVAAGETGKETVHLRDLLGSIGFGCRRSKTLFEDNKRAINLSKGSGAHCRTKHIRVRWHGIREWVQEGILALKYVQTGDQLADILTKGLSRVK 354 L GGA SW S+KQ A SSTEAEY+AA KE L L IG C+ + L DN+ A+ ++ H +TKHI VR+H +RE V+ G + L+YV GDQ+AD+LTKGL + K Sbjct: 104 LAGGAISWSSKKQNMTALSSTEAEYIAAAHAAKEATWLCTFLSEIGRPCKAATLLLMDNQSAMAIAWNPVFHVQTKHIDVRYHFLREKVEAGAINLQYVPMGDQVADVLTKGLVKAK 220
BLAST of mRNA_H-paniculata_contig10335.221.1 vs. uniprot
Match: A0A427YPN6_9TREE (Uncharacterized protein n=1 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427YPN6_9TREE) HSP 1 Score: 110 bits (275), Expect = 6.900e-28 Identity = 54/113 (47.79%), Postives = 71/113 (62.83%), Query Frame = 1 Query: 4 LNGGARSWCSRKQQFVACSSTEAEYVAAGETGKETVHLRDLLGSIGFGCRRSKTLFEDNKRAINLSKGSGAHCRTKHIRVRWHGIREWVQEGILALKYVQTGDQLADILTKGL 342 L G A W SR+Q VA S+ EAEYVA E +E V L+ LL +G + L+ DN+ AI L++ G H RTKHI +RWH IRE +++G++ L YV T Q+ADI TK L Sbjct: 2 LGGSAIVWTSRRQATVASSTVEAEYVAVSEAAREAVWLKGLLDELGVTPKEPTPLWCDNQGAIRLARNPGTHRRTKHIAIRWHLIRELIEDGVVRLGYVPTASQVADIFTKAL 114
BLAST of mRNA_H-paniculata_contig10335.221.1 vs. uniprot
Match: A0A4Y9ZSL8_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZSL8_9AGAM) HSP 1 Score: 113 bits (282), Expect = 8.140e-28 Identity = 56/117 (47.86%), Postives = 73/117 (62.39%), Query Frame = 1 Query: 4 LNGGARSWCSRKQQFVACSSTEAEYVAAGETGKETVHLRDLLGSIGFGCRRSKTLFEDNKRAINLSKGSGAHCRTKHIRVRWHGIREWVQEGILALKYVQTGDQLADILTKGLSRVK 354 L GGA SW S+KQ A SSTEAEY+ A KE LR L IG C+ + L DN+ A+ ++ H RTKHI +R+H +RE V+ G + L+YV TGDQ+AD+L KGL + K Sbjct: 202 LAGGAISWSSKKQNTTALSSTEAEYIVATHAAKEATWLRTFLSKIGRPCKAATLLLMDNQSAMAIAWNPAFHARTKHIDMRYHFLREKVEAGAINLQYVPTGDQVADVLMKGLVKAK 318
BLAST of mRNA_H-paniculata_contig10335.221.1 vs. uniprot
Match: H3GB65_PHYRM (Uncharacterized protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB65_PHYRM) HSP 1 Score: 108 bits (269), Expect = 9.920e-28 Identity = 55/119 (46.22%), Postives = 79/119 (66.39%), Query Frame = 1 Query: 4 LNGGARSWCSRKQQFVACSSTEAEYVAAGETGKETVHLRDLLGSIG-FGCRRSKTLFEDNKRAINLSKGSGAHCRTKHIRVRWHGIREWVQEGILALKYVQTGDQLADILTKGLSRVKF 357 +NGG SW S+KQ+ VA SSTEAEY+A E +E V L+ L +G + ++EDN+ +I L+K H RTKHI +R+H +RE V++G + L+YV T D LADI+TK ++ V+F Sbjct: 1 MNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADIMTKAITAVQF 119
BLAST of mRNA_H-paniculata_contig10335.221.1 vs. uniprot
Match: A0A060SU91_PYCCI (Uncharacterized protein n=2 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SU91_PYCCI) HSP 1 Score: 111 bits (277), Expect = 1.820e-27 Identity = 62/125 (49.60%), Postives = 79/125 (63.20%), Query Frame = 1 Query: 1 RLNGGARSWCSRKQQFVACSSTEAEYVAAGETGKETVHLRDLLGSIG---FGCRRSKT----LFEDNKRAINLSKGSGAHCRTKHIRVRWHGIREWVQEGILALKYVQTGDQLADILTKGLSRVK 354 +L GGA SWCSRKQQ +A SSTEAEYVA KE + L LL + F S+ + DN+ A+ L+K S H RTKHI VR H IR+ ++ G L ++YV TGDQ+AD+LTK L+R K Sbjct: 149 KLGGGAISWCSRKQQSIAQSSTEAEYVALALAAKEGLWLSTLLSDLDSPVFHALSSRLQVPLILVDNQSAMALAKNSSFHDRTKHIAVRHHFIRDELERGTLTVEYVPTGDQVADVLTKSLAREK 273
BLAST of mRNA_H-paniculata_contig10335.221.1 vs. uniprot
Match: H3HA07_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HA07_PHYRM) HSP 1 Score: 105 bits (263), Expect = 5.580e-27 Identity = 53/119 (44.54%), Postives = 79/119 (66.39%), Query Frame = 1 Query: 4 LNGGARSWCSRKQQFVACSSTEAEYVAAGETGKETVHLRDLLGSIG-FGCRRSKTLFEDNKRAINLSKGSGAHCRTKHIRVRWHGIREWVQEGILALKYVQTGDQLADILTKGLSRVKF 357 +NGG SW S+KQ+ VA SSTEAEY+A + +E V L+ L +G + ++EDN+ +I L+K H RTKHI +R+H +RE V++G + L+YV T D LAD++TK ++ V+F Sbjct: 1 MNGGCISWRSKKQRTVALSSTEAEYMALSDATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAITAVQF 119
BLAST of mRNA_H-paniculata_contig10335.221.1 vs. uniprot
Match: UPI0006A737CF (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=UPI0006A737CF) HSP 1 Score: 110 bits (276), Expect = 7.490e-27 Identity = 57/111 (51.35%), Postives = 71/111 (63.96%), Query Frame = 1 Query: 4 LNGGARSWCSRKQQFVACSSTEAEYVAAGETGKETVHLRDLLGSIGFGCRRSKTLFEDNKRAINLSKGSGAHCRTKHIRVRWHGIREWVQEGILALKYVQTGDQLADILTK 336 GGA SW S+KQ V S+TEAEYVAA + V +R++L IGFG LF DN AI LSK H R+KHI VR+H +RE V EGI++ +Y T +QLADI+TK Sbjct: 213 FGGGAVSWSSKKQPIVTLSTTEAEYVAAANGACQAVWMRNMLTEIGFGQGDGTVLFCDNSSAIKLSKNLVLHGRSKHIHVRFHFLRELVNEGIISTEYCSTHEQLADIMTK 323 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10335.221.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10335.221.1 >prot_H-paniculata_contig10335.221.1 ID=prot_H-paniculata_contig10335.221.1|Name=mRNA_H-paniculata_contig10335.221.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=120bp RLNGGARSWCSRKQQFVACSSTEAEYVAAGETGKETVHLRDLLGSIGFGCback to top mRNA from alignment at H-paniculata_contig10335:8338..8697- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10335.221.1 ID=mRNA_H-paniculata_contig10335.221.1|Name=mRNA_H-paniculata_contig10335.221.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=360bp|location=Sequence derived from alignment at H-paniculata_contig10335:8338..8697- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10335:8338..8697- >mRNA_H-paniculata_contig10335.221.1 ID=mRNA_H-paniculata_contig10335.221.1|Name=mRNA_H-paniculata_contig10335.221.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=720bp|location=Sequence derived from alignment at H-paniculata_contig10335:8338..8697- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |