mRNA_H-paniculata_contig10312.209.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig10312.209.1
Unique NamemRNA_H-paniculata_contig10312.209.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig10312.209.1 vs. uniprot
Match: D7FHT8_ECTSI (Pseudouridylate synthase 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT8_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 2.210e-76
Identity = 166/377 (44.03%), Postives = 190/377 (50.40%), Query Frame = 1 
Query:    1 RNFDHSKWRRRTVAVQLMYEGERFAGFCSQSEGNEDTIEKSLFHALTTTKLVDKITTGVNYSRCGRTDRGVSALGNVITVCARSKFPKSL-DADLPSMPLGALWVEQTRDGNNGGGSSSSGTGXXXXXXXXXXXXXXXXXXXGPENNAAQSASVEEKWGXXXXXXXXXXXXXXXXXXXXEKEGQRHD-KHMSSVDTGAGADVGAMYAGVGEGEASMLSSAARSGGAVLKAKSEKHKDKVNVSSAQDV-----------GKGGKRG-----------------------------------GMMVREMDYCTLLNRVLPPEIRALAWAPVTDDFSARFSCSDRTYRYFFLERDLDIQAMDTAAAKIVGEHDFRNLCKI 987
            R+FDHS+WR+RTVAVQLMYEG  +AGFCSQSEGNE+TIEK LF ALTTTKLV+ ITTG NYSRCGRTDRGVSALGNVITV  RSKFPK + DADLP+ PLG+LWV  T    NG  S     G                    P    A+  S   K                        EG   D +H +S       + G    G GE           SG                                  G  G+RG                                   G  V E+DYC +LNRVLPP +R LAWAPVT+ FSARFSCSDRTYRYFF+ RD+D++AM+ AA+KIVG HDFRNLCKI
Sbjct:   95 RDFDHSRWRKRTVAVQLMYEGGGYAGFCSQSEGNEETIEKHLFRALTTTKLVETITTGDNYSRCGRTDRGVSALGNVITVSMRSKFPKHVPDADLPTSPLGSLWVAPTAPPPNGAESVGEHDGAPKKENQTMPEGSAAAEQEQPAAGVAEEGSGLAK--------------------GKNSEGCPSDSRHQASGAPEPWTEAGGGEVGRGE---------VASGNPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRGSEGERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGEVTEIDYCGILNRVLPPGVRTLAWAPVTEGFSARFSCSDRTYRYFFMARDMDVKAMNEAASKIVGSHDFRNLCKI 442
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BLAST of mRNA_H-paniculata_contig10312.209.1 vs. uniprot
Match: A0A6H5JEX6_9PHAE (PseudoU_synth_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEX6_9PHAE)

HSP 1 Score: 241 bits (614), Expect = 6.970e-70
Identity = 163/367 (44.41%), Postives = 186/367 (50.68%), Query Frame = 1 
Query:    1 RNFDHSKWRRRTVAVQLMYEGERFAGFCSQSEGNEDTIEKSLFHALTTTKLVDKITTGVNYSRCGRTDRGVSALGNVITVCARSKFPKSL-DADLPSMPLGALWVEQTRDGNNGGGSSSSGTGXXXXXXXXXXXXXXXXXXXGPENNAAQSASVEEKWGXXXXXXXXXXXXXXXXXXXXEKEGQRHD-KHMSSVDTGAGADVGAMYAG-VGEGEASM-----------------------------------LSSAARSGGAVLKAKSEKHKDKVNVSSAQDVGKGGKRGGMMVREMDYCTLLNRVLPPEIRALAWAPVTDDFSARFSCSDRTYRYFFLERDLDIQAMDTAAAKIVGEHDFRNLCKI 987
            R+FDH++WR+RTVAVQLMYEG  +AGFCSQSEGNEDTIEK LF ALTTTKLV+ I TG NYSRCGRTDRGVSALGNVITV  RSKFPK + DADLP+ PLG+LWV       N   S     G                    PE +AA         G                      EG   D +H +S   GA     A   G VG GE +                                                                          G  + E+DYC +LNRVLPP IRALAWAPVT+ FSARFSCSDRTYRYFF+ RD++I+AM+ AA+KIVG HDFRNLCKI
Sbjct:  108 RDFDHARWRKRTVAVQLMYEGGGYAGFCSQSEGNEDTIEKHLFRALTTTKLVESIATGDNYSRCGRTDRGVSALGNVITVSMRSKFPKHVPDADLPTSPLGSLWVAPIAPPQNAAKSVGENDGGFKRESQTM-----------PEGSAAAEQEQPAAGGADEGSGLAKGK---------SSEGCPSDSRHPAS---GASDPCTAPGGGEVGRGEVASGNPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGEITEIDYCGILNRVLPPGIRALAWAPVTEGFSARFSCSDRTYRYFFMARDMNIKAMNEAASKIVGSHDFRNLCKI 451
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BLAST of mRNA_H-paniculata_contig10312.209.1 vs. uniprot
Match: A0A1Y1IJC7_KLENI (Pseudouridylate synthase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IJC7_KLENI)

HSP 1 Score: 122 bits (307), Expect = 2.220e-27
Identity = 109/338 (32.25%), Postives = 149/338 (44.08%), Query Frame = 1 
Query:   10 DHSKWRRRTVAVQLMYEGERFAGFCSQSEGNED-TIEKSLFHALTTTKLVDKI-TTGVNYSRCGRTDRGVSALGNVITV----CARSKFPKSLDADL-----PSMPLGALWVEQTRDGNNGGGSSSSGTGXXXXXXXXXXXXXXXXXXXG-PENNAAQSASVEEKWGXXXXXXXXXXXXXXXXXXXXEKEGQRHDKHMSSVDTGAGADVGAMYAGVGEGEASMLSSAARSGGAVLKAKSEKHKDKVNVSSAQDVGKGGKRGGMMVREMDYCTLLNRVLPPEIRALAWAPVTDDFSARFSCSDRTYRYFFLERDLDIQAMDTAAAKIVGEHDFRNLCKI 987
            D S + RR VA+++MY G R+ GF SQ     D TIE  LF AL  T+L+     T   YSRCGRTD+GVSALG V+ +    C R     +++  L     P  P  A   E  R     GG S+                       G P      +ASV                         E EG R +  +S           + ++ +G   A    S   +   +L+ + ++   +    S +    G    G    E+DY   LNR LP +IR   W+PV  DF ARFSC  R Y+YFF+   LDI+AM+ AAA+ VG +DFRNLC++
Sbjct:  147 DLSHYPRRFVALRIMYMGARYHGFASQPGNVLDMTIESKLFAALEKTRLLPPGGRTQAQYSRCGRTDKGVSALGQVVALWLRSCRRPPAAPAVEPPLSTSCPPEDPHSATPAEPQR--RCAGGDSAEALRESIAEAVPHAERGAPEMPPGLPPRKWDVTASV--------------LVHPELSRSVIEIEGNRGEVELSDWSPAGLKSAHSPHSDLGGHVAEERGSGEATDWVLLETEPDEDVGQEFPISRERADDGEWSDGDD-EEIDYVAALNRALPEDIRVTGWSPVRPDFDARFSCKFREYKYFFVRGQLDIEAMEKAAARFVGTYDFRNLCRM 467
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BLAST of mRNA_H-paniculata_contig10312.209.1 vs. uniprot
Match: A0A7S3U2S7_EMIHU (tRNA pseudouridine synthase (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3U2S7_EMIHU)

HSP 1 Score: 103 bits (257), Expect = 7.660e-24
Identity = 45/77 (58.44%), Postives = 57/77 (74.03%), Query Frame = 1 
Query:  757 GMMVREMDYCTLLNRVLPPEIRALAWAPVTDDFSARFSCSDRTYRYFFLERDLDIQAMDTAAAKIVGEHDFRNLCKI 987
            G++  EMDY  +LNRVLPP++R ++WAPV  DFSARF  + RTY YFF    LDI AM  AA ++VGEHD+RN CK+
Sbjct:    3 GVVAGEMDYVRVLNRVLPPDVRVVSWAPVAADFSARFDATSRTYHYFFARGKLDIAAMRDAARRLVGEHDYRNFCKL 79
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BLAST of mRNA_H-paniculata_contig10312.209.1 vs. uniprot
Match: C4A002_BRAFL (tRNA pseudouridine synthase n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C4A002_BRAFL)

HSP 1 Score: 108 bits (270), Expect = 1.200e-23
Identity = 50/84 (59.52%), Postives = 60/84 (71.43%), Query Frame = 1 
Query:  736 GKGGKRGGMMVREMDYCTLLNRVLPPEIRALAWAPVTDDFSARFSCSDRTYRYFFLERDLDIQAMDTAAAKIVGEHDFRNLCKI 987
            G    R G    E+ Y  +LN+VLPP+IR LAWAPV  DFSARFSC  RTY+YFF + +LDIQ+M  A  K+VGEHDFRN CK+
Sbjct:  153 GTANHREGDKTTEIKYVYILNKVLPPDIRVLAWAPVDPDFSARFSCQQRTYKYFFPKGNLDIQSMHLAGQKLVGEHDFRNFCKM 236
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BLAST of mRNA_H-paniculata_contig10312.209.1 vs. uniprot
Match: A0A7R9Y7Q5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y7Q5_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.390e-23
Identity = 50/73 (68.49%), Postives = 57/73 (78.08%), Query Frame = 1 
Query:  769 REMDYCTLLNRVLPPEIRALAWAPVTDDFSARFSCSDRTYRYFFLERDLDIQAMDTAAAKIVGEHDFRNLCKI 987
            RE+DYC LLNRVLP  IR LAWAPVT+DFSARFS   R+YRYFF  R LD+ AMD AA  ++G HDFRN CK+
Sbjct:  156 REIDYCGLLNRVLPEAIRVLAWAPVTEDFSARFSAESRSYRYFFSARGLDLSAMDEAARLLIGSHDFRNFCKM 228
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BLAST of mRNA_H-paniculata_contig10312.209.1 vs. uniprot
Match: A0A851D926_TODME (tRNA pseudouridine synthase (Fragment) n=1 Tax=Todus mexicanus TaxID=135184 RepID=A0A851D926_TODME)

HSP 1 Score: 107 bits (268), Expect = 3.460e-23
Identity = 53/94 (56.38%), Postives = 62/94 (65.96%), Query Frame = 1 
Query:  706 KVNVSSAQDVGKGGKRGGMMVREMDYCTLLNRVLPPEIRALAWAPVTDDFSARFSCSDRTYRYFFLERDLDIQAMDTAAAKIVGEHDFRNLCKI 987
            K+N       GKG         E+ Y  +LNRVLPP+IRALAWAPV   FSARFSC  RTYRYFF   DLD++ M+ AA + VG HDFRNLCK+
Sbjct:   16 KLNGHEGGSEGKGEXXXXXXXXELRYTHILNRVLPPDIRALAWAPVEPSFSARFSCLKRTYRYFFPCADLDVELMNAAAQRYVGTHDFRNLCKM 109
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BLAST of mRNA_H-paniculata_contig10312.209.1 vs. uniprot
Match: UPI001E1D5E0F (uncharacterized protein LOC123526841 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5E0F)

HSP 1 Score: 110 bits (276), Expect = 3.870e-23
Identity = 50/83 (60.24%), Postives = 61/83 (73.49%), Query Frame = 1 
Query:  736 GKGGKRGGMMVREMDYCTLLNRVLPPEIRALAWAPVTDDFSARFSCSDRTYRYFFLERDLDIQAMDTAAAKIVGEHDFRNLCK 984
            G   +R G    E+ YC +LN+ LPPEIRALAWAPV  +FS+RFSC  RTY+YFF    L+I+ MD AA K++GEHDFRNLCK
Sbjct: 1043 GTAAERPGDKTTEIQYCHILNKNLPPEIRALAWAPVDPEFSSRFSCKKRTYKYFFPRGSLNIEIMDQAAKKLIGEHDFRNLCK 1125
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BLAST of mRNA_H-paniculata_contig10312.209.1 vs. uniprot
Match: A0A0B6ZLH6_9EUPU (PseudoU_synth_1 domain-containing protein (Fragment) n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6ZLH6_9EUPU)

HSP 1 Score: 107 bits (267), Expect = 4.340e-23
Identity = 48/79 (60.76%), Postives = 61/79 (77.22%), Query Frame = 1 
Query:  751 RGGMMVREMDYCTLLNRVLPPEIRALAWAPVTDDFSARFSCSDRTYRYFFLERDLDIQAMDTAAAKIVGEHDFRNLCKI 987
            R G    E+ Y  +LN+VLPPEIR LAWAPV  +FSARFSC  RTY+Y+F + +LD+Q M+ AA K++GEHDFRNLCK+
Sbjct:  167 RPGDNTTEIRYVYILNKVLPPEIRVLAWAPVDPEFSARFSCKKRTYKYYFPKGNLDLQRMNEAATKLIGEHDFRNLCKM 245
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BLAST of mRNA_H-paniculata_contig10312.209.1 vs. uniprot
Match: A0A7S4GGL5_9EUGL (tRNA pseudouridine synthase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GGL5_9EUGL)

HSP 1 Score: 108 bits (271), Expect = 4.360e-23
Identity = 50/78 (64.10%), Postives = 59/78 (75.64%), Query Frame = 1 
Query:  754 GGMMVREMDYCTLLNRVLPPEIRALAWAPVTDDFSARFSCSDRTYRYFFLERDLDIQAMDTAAAKIVGEHDFRNLCKI 987
            G    RE+DY  +LNRVLP +IR LAWAPV  DFSARFSC+ R Y+YFFL+RDLDI  M  A+  +VGEHDFRN CK+
Sbjct:  143 GNPNARELDYVQMLNRVLPFDIRVLAWAPVDADFSARFSCAGRVYKYFFLKRDLDIDRMREASQLLVGEHDFRNFCKM 220
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10312.209.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHT8_ECTSI2.210e-7644.03Pseudouridylate synthase 3 n=1 Tax=Ectocarpus sili... [more]
A0A6H5JEX6_9PHAE6.970e-7044.41PseudoU_synth_1 domain-containing protein n=1 Tax=... [more]
A0A1Y1IJC7_KLENI2.220e-2732.25Pseudouridylate synthase n=1 Tax=Klebsormidium nit... [more]
A0A7S3U2S7_EMIHU7.660e-2458.44tRNA pseudouridine synthase (Fragment) n=1 Tax=Emi... [more]
C4A002_BRAFL1.200e-2359.52tRNA pseudouridine synthase n=2 Tax=Branchiostoma ... [more]
A0A7R9Y7Q5_9STRA1.390e-2368.49Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A851D926_TODME3.460e-2356.38tRNA pseudouridine synthase (Fragment) n=1 Tax=Tod... [more]
UPI001E1D5E0F3.870e-2360.24uncharacterized protein LOC123526841 n=1 Tax=Merce... [more]
A0A0B6ZLH6_9EUPU4.340e-2360.76PseudoU_synth_1 domain-containing protein (Fragmen... [more]
A0A7S4GGL5_9EUGL4.360e-2364.10tRNA pseudouridine synthase n=1 Tax=Eutreptiella g... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10312contigH-paniculata_contig10312:870..4748 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score251.9
Seed ortholog evalue4.1e-64
Seed eggNOG ortholog2880.D7FHT8
Preferred namePUS3
KEGG koko:K01855
Hectar predicted targeting categoryother localisation
GOsGO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481
EggNOG free text desc.mRNA pseudouridine synthesis
EggNOG OGsCOG0101@1,KOG2554@2759
EC5.4.99.45
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Exons5
Model size987
Cds size987
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10312.209.1prot_H-paniculata_contig10312.209.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig10312 870..4748 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928734.2659783-CDS-H-paniculata_contig10312:869..9661622928734.2659783-CDS-H-paniculata_contig10312:869..966Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10312 870..966 -
1691480599.5559685-CDS-H-paniculata_contig10312:869..9661691480599.5559685-CDS-H-paniculata_contig10312:869..966Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10312 870..966 -
1622928734.2806418-CDS-H-paniculata_contig10312:1335..15831622928734.2806418-CDS-H-paniculata_contig10312:1335..1583Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10312 1336..1583 -
1691480599.5679953-CDS-H-paniculata_contig10312:1335..15831691480599.5679953-CDS-H-paniculata_contig10312:1335..1583Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10312 1336..1583 -
1622928734.2921154-CDS-H-paniculata_contig10312:1883..22971622928734.2921154-CDS-H-paniculata_contig10312:1883..2297Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10312 1884..2297 -
1691480599.5791435-CDS-H-paniculata_contig10312:1883..22971691480599.5791435-CDS-H-paniculata_contig10312:1883..2297Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10312 1884..2297 -
1622928734.3076262-CDS-H-paniculata_contig10312:3264..34021622928734.3076262-CDS-H-paniculata_contig10312:3264..3402Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10312 3265..3402 -
1691480599.5889182-CDS-H-paniculata_contig10312:3264..34021691480599.5889182-CDS-H-paniculata_contig10312:3264..3402Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10312 3265..3402 -
1622928734.3236332-CDS-H-paniculata_contig10312:4658..47481622928734.3236332-CDS-H-paniculata_contig10312:4658..4748Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10312 4659..4748 -
1691480599.5983393-CDS-H-paniculata_contig10312:4658..47481691480599.5983393-CDS-H-paniculata_contig10312:4658..4748Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10312 4659..4748 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig10312.209.1

>prot_H-paniculata_contig10312.209.1 ID=prot_H-paniculata_contig10312.209.1|Name=mRNA_H-paniculata_contig10312.209.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=329bp
RNFDHSKWRRRTVAVQLMYEGERFAGFCSQSEGNEDTIEKSLFHALTTTK
LVDKITTGVNYSRCGRTDRGVSALGNVITVCARSKFPKSLDADLPSMPLG
ALWVEQTRDGNNGGGSSSSGTGAGSESAKTGSGKDTDQSQDGPENNAAQS
ASVEEKWGSASSGSGGSSISVVTGANEAEKEGQRHDKHMSSVDTGAGADV
GAMYAGVGEGEASMLSSAARSGGAVLKAKSEKHKDKVNVSSAQDVGKGGK
RGGMMVREMDYCTLLNRVLPPEIRALAWAPVTDDFSARFSCSDRTYRYFF
LERDLDIQAMDTAAAKIVGEHDFRNLCKI
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mRNA from alignment at H-paniculata_contig10312:870..4748-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10312.209.1 ID=mRNA_H-paniculata_contig10312.209.1|Name=mRNA_H-paniculata_contig10312.209.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3879bp|location=Sequence derived from alignment at H-paniculata_contig10312:870..4748- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGAACTTCGACCATTCCAAGTGGCGTCGACGAACAGTCGCTGTACAGCT
CATGTACGAGGGCGAGAGATTTGCCGGCTTTTGCTCCCAGGTACAGTGGG
TACGCGAATTTTTAAGCTGGCATCATTTCTATCCAGGGCGAGCAATATCG
AGGGTCATCGCCATTTGGCACCAAACCCTTGATGCTTTCTACATGAGTAG
CAGTAGAGTGATGGGCTACGATAATGCAGTTCGTGCTCGCCCTCTACCCC
GCGGACTTACAGAGCTGACATAACTTTTCTTTTTCAGGAGTAAGTTGTGT
AAATCAAAGCAAAAGAGACTTTTGAAGTGGAGGGTAATGTGGAGAATACC
GTATAGATATAGGTCATTTCCGCTAGTGTCTACGAAGGACAAAACGGTCA
TTTCGCGTCTTATTTATATTTATATGTACGTTGAGGTGGTTGTTGACTGT
TACATAGAAAAAAAAAAAAAAATCCCAACCAAGGGCGAGGTACAAAAACG
AACAAAAAATGGTACCCTTATGCGGAAAGGTGGTAAAATCGTCCCCGCGT
TAAGGACCCTCATTTTTCCCGCGTGCACACGTGCTGTCCTTAAATCCGGG
GACGACTGTACCACTGTACGGTATCTACCGTACGCTACGGTGCCACTGAT
CTTTAGTCAAATTATACTGCACCAAGGTACTTTATACAGGTGAAAGGAAA
TCGAAATGATATTGCTTACTGGCACTTGAAAGTATAAAATCATCCTATAA
AAGTCTCGAACCAATGTTTCGTCGAGAAGGACTGCTTCCTGGTAAAGGTT
CGATACTCTGACCGCTAGTTGACGTAGTTGTGCCCATGACGACTGTAGCG
CTCCATTTTTTTGTTGTCAGATGCCTTGCTTGGTTTTATTCCGAAACAAA
CTCCTCGGCACTGAAAATGTTCGAGATTTTAACCAGTAAATGAAATATAA
AAGACCACTCGTCACGTATTGTCATGTTATCCATTGCTCACTTGCTACAG
CATAATAGATCCCACACGCTTTGTTTGGGCGCTGTCATCGTCCCAGAGAA
TGTGTATTAAACATCGTCACTATAAGAATATATGACAGTGTATGCCGTCA
CCTGTACGCCCGACTGTGTAGCTCCTTCCTTTTCATTTTCACTCCATGCC
CCTACTCGTTGAACCCCTGACCCATCTGCACTCGTGCTGGCTAATCTGTT
GCCCATGGATATTTAGTTGCGTGCTTTTCTTCGGCCATCAACCATGGTGG
AATCGATATTCCTCCACCATTTTCCCCTAAAATTGTATTGTGCCGCGAAT
GGCGGTGTAATCTCTCTTCCCACCCGCAATTTACCGGGGAATCCAGAGTG
AGGGCAACGAGGACACTATAGAGAAGAGCCTCTTTCACGCACTCACAACC
ACCAAGCTGGTGGACAAGATAACCACGGGAGTCAACTATTCGCGGTGCGG
GCGAACGGATCGCGGGGTCAGCGCCCTCGGGAATGTGAGTTTTTGAATAA
GCAATACTGCAGCTGGGCAGTAAATAGGCGAGTTACCCATGTATGTTGTT
TCTATTAGCATAGTAGATGGCGCAGTCGGTGACTCAACGAAGATACCGGT
ACTGTACGCTGCTATCTTTCGTTTTTTTTCCTTTTGTTGAATTCGCTGTG
CAGTAAATAGGCGCGGCCCTCGTTTTTCATACTCATATTTCATCTGTTTT
ATAGTCAACGCCCAGAGTGGTGCGACTAGTAGTGATATTCAGCCACTGCT
ACACTCGTGCAGTCCGTCCTTTGTCCTTGTACTAATTTCGTCATTATCCT
AAATCTCATAATTCATCCACCGGCTCTCCAAGCCCGCAGTCCAAACAAAC
AGTATGTGACACGGTAGTGCTATAAATTCGGCTGGAAAACAAATTGGACT
GTTTCGAAATAACGGTCACGATCGCCTTGCTGCCTTGTGTGAGATGGATG
GTGTGTACCTCCAAAAATGCTTGCACTAAAATTGATCGGTTGCAAGGGTT
CGTGTAGAAACAGTTCTTTAAAAAGGTACAGTATGTTATGTATGGGGTTA
TCCGCATTGTGAGTCTTCCAGTGGCCATGTGTTGCTTTGGTTTAAACCCC
GCTCCCAAGCCGGAGGCTGAGGTGGATAGGATATGATAGGATAGGATAGG
TAAAGCATTTTCGAGCCACGTTCAGCAACGTAGGAAAGAACGATTGGTCA
TCAGAGATAGCCCGTACATGGACAAATTTCCGTCCTATCGAGAACGAGTC
GTCGATGGTGTAACAAATACGGTATGAAAAGCATGAGTACCCCTCTCCCC
CCCGTACCATCTACAGTGGTACAAAGCTCTGTCCTCCAGAGCACGCGTGG
TCAATGGTCCAATAAATTCCGCTGCAAAATGAGCTATCCCTTCGTCCCCC
CCATCTCCGCGTCCTGTTCGACGCTCCACTTTGCTCATGAATGGTTTGCA
GGTGATCACGGTCTGCGCTCGCTCTAAGTTCCCCAAGAGTTTAGATGCAG
ACTTACCCTCAATGCCACTGGGAGCTCTTTGGGTAGAGCAGACCCGCGAC
GGTAACAACGGCGGCGGCAGCAGCAGTAGTGGTACTGGTGCGGGGTCGGA
ATCAGCCAAGACAGGGTCAGGGAAGGACACCGACCAGTCCCAAGATGGGC
CCGAGAACAACGCGGCGCAATCGGCATCGGTTGAAGAAAAATGGGGCAGC
GCCAGCAGTGGTAGTGGTGGTAGTAGTATCAGTGTTGTAACCGGCGCAAA
CGAAGCAGAAAAGGAAGGGCAACGACATGACAAACACATGAGCAGCGTTG
ATACTGGTGCTGGTGCTGATGTTGGTGCTATGTACGCAGGTGTAGGAGAA
GGAGAAGCATCAATGGTAGAAGCCGTATGTGATACACAGGCTGTGGCACC
GGCAGCGCCGGCGGGTTTATTGATCGCACAGAAGTCGATGAAGGTGCGGG
GGGATACAGGTGAACCAGTCGCCGAACGGTGCTCGGAAGCTTCGGCGGGT
GAGAAGATTTCGGTGGCCAATCAGGAAGAAGCAGCAGACAGGACTGACGG
TTGTGCGGTCGGGATCATCGCCTGCAGCAGCGGACACGATGATGGTGATC
GGGATGGGTCGAGAGTTAGGAACGTTCAGGACGATGATGACAACGATGAC
AGGCATGTGGCGGAGCTATCGAGTGCGGCAAGAAGTGGTGGTGCTGTGCT
AAAGGCTAAGAGTGAAAAGCACAAAGACAAAGTCAACGTGAGTTCTGCGC
AAGACGTGGGAAAGGGTGGGAAAAGAGGGGGTATGATGGTTCGGGAGATG
GATTACTGCACGCTGCTCAATCGAGTGTTGCCTCCGGAGATCCGGGCTCT
GGCGTGGGCGCCCGTGACGGATGACTTTAGCGCGCGATTCAGCTGCTCGG
ATCGAACATACAGGTAGGCGTCTTATTATGTAGTCCTTGATAGTTAGTTA
TTATTTATTCGGTAATAACGGATCGTGATAGAAGACGTTGATGTTAGAAG
AGTTTCCTTTCTATATCCAAGTGATTTTTGATAACACAACGTAATGTCAA
AATTATCTCGTTTTTTTTTTCTTTTTAATAATTGGTTTATGTTTTTTGAT
AAGGTATTTATGTACTCCACTTAACGTGGGCCATGTTCGCTGGAGTGTAA
ATGAAAATCTCCTGCCTCCGATGTATCCACATATATACCAACACTGCGAC
ATTAGCTTGTAACCCTCTGCACGAACCATATGTTAGCTTTAGTGGCGTTG
CTTTCTTATCATTTCATATATTTACTCGGCAGGTATTTCTTTCTGGAAAG
GGATCTTGACATCCAGGCAATGGATACCGCCGCCGCTAAGATTGTGGGAG
AACATGATTTCCGAAACCTCTGCAAGATC
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Coding sequence (CDS) from alignment at H-paniculata_contig10312:870..4748-

>mRNA_H-paniculata_contig10312.209.1 ID=mRNA_H-paniculata_contig10312.209.1|Name=mRNA_H-paniculata_contig10312.209.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1974bp|location=Sequence derived from alignment at H-paniculata_contig10312:870..4748- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGAACTTCGACCATTCCAAGTGGCGTCGACGAACAGTCGCTGTACAGCT
CATGTACGAGGGCGAGAGATTTGCCGGCTTTTGCTCCCAGAGGAACTTCG
ACCATTCCAAGTGGCGTCGACGAACAGTCGCTGTACAGCTCATGTACGAG
GGCGAGAGATTTGCCGGCTTTTGCTCCCAGAGTGAGGGCAACGAGGACAC
TATAGAGAAGAGCCTCTTTCACGCACTCACAACCACCAAGCTGGTGGACA
AGATAACCACGGGAGTCAACTATTCGCGGTGCGGGCGAACGGATCGCGGG
GTCAGCGCCCTCGGGAATAGTGAGGGCAACGAGGACACTATAGAGAAGAG
CCTCTTTCACGCACTCACAACCACCAAGCTGGTGGACAAGATAACCACGG
GAGTCAACTATTCGCGGTGCGGGCGAACGGATCGCGGGGTCAGCGCCCTC
GGGAATGTGATCACGGTCTGCGCTCGCTCTAAGTTCCCCAAGAGTTTAGA
TGCAGACTTACCCTCAATGCCACTGGGAGCTCTTTGGGTAGAGCAGACCC
GCGACGGTAACAACGGCGGCGGCAGCAGCAGTAGTGGTACTGGTGCGGGG
TCGGAATCAGCCAAGACAGGGTCAGGGAAGGACACCGACCAGTCCCAAGA
TGGGCCCGAGAACAACGCGGCGCAATCGGCATCGGTTGAAGAAAAATGGG
GCAGCGCCAGCAGTGGTAGTGGTGGTAGTAGTATCAGTGTTGTAACCGGC
GCAAACGAAGCAGAAAAGGAAGGGCAACGACATGACAAACACATGAGCAG
CGTTGATACTGGTGCTGGTGCTGATGTTGGTGCTATGTACGCAGGTGTAG
GAGAAGGAGAAGCATCAATGGTGATCACGGTCTGCGCTCGCTCTAAGTTC
CCCAAGAGTTTAGATGCAGACTTACCCTCAATGCCACTGGGAGCTCTTTG
GGTAGAGCAGACCCGCGACGGTAACAACGGCGGCGGCAGCAGCAGTAGTG
GTACTGGTGCGGGGTCGGAATCAGCCAAGACAGGGTCAGGGAAGGACACC
GACCAGTCCCAAGATGGGCCCGAGAACAACGCGGCGCAATCGGCATCGGT
TGAAGAAAAATGGGGCAGCGCCAGCAGTGGTAGTGGTGGTAGTAGTATCA
GTGTTGTAACCGGCGCAAACGAAGCAGAAAAGGAAGGGCAACGACATGAC
AAACACATGAGCAGCGTTGATACTGGTGCTGGTGCTGATGTTGGTGCTAT
GTACGCAGGTGTAGGAGAAGGAGAAGCATCAATGCTATCGAGTGCGGCAA
GAAGTGGTGGTGCTGTGCTAAAGGCTAAGAGTGAAAAGCACAAAGACAAA
GTCAACGTGAGTTCTGCGCAAGACGTGGGAAAGGGTGGGAAAAGAGGGGG
TATGATGGTTCGGGAGATGGATTACTGCACGCTGCTCAATCGAGTGTTGC
CTCCGGAGATCCGGGCTCTGGCGTGGGCGCCCGTGACGGATGACTTTAGC
GCGCGATTCAGCTGCTCGGATCGAACATACAGCTATCGAGTGCGGCAAGA
AGTGGTGGTGCTGTGCTAAAGGCTAAGAGTGAAAAGCACAAAGACAAAGT
CAACGTGAGTTCTGCGCAAGACGTGGGAAAGGGTGGGAAAAGAGGGGGTA
TGATGGTTCGGGAGATGGATTACTGCACGCTGCTCAATCGAGTGTTGCCT
CCGGAGATCCGGGCTCTGGCGTGGGCGCCCGTGACGGATGACTTTAGCGC
GCGATTCAGCTGCTCGGATCGAACATACAGGTATTTCTTTCTGGAAAGGG
ATCTTGACATCCAGGCAATGGATACCGCCGCCGCTAAGATTGTGGGAGAA
CATGATTTCCGAAACCTCTGCAAGATCGTATTTCTTTCTGGAAAGGGATC
TTGACATCCAGGCAATGGATACCGCCGCCGCTAAGATTGTGGGAGAACAT
GATTTCCGAAACCTCTGCAAGATC
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