|
Homology
BLAST of mRNA_H-paniculata_contig1027.184.1 vs. uniprot
Match: D7G0X1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X1_ECTSI) HSP 1 Score: 117 bits (292), Expect = 2.590e-27 Identity = 82/98 (83.67%), Postives = 89/98 (90.82%), Query Frame = 3
Query: 48 MDNTGGGEPDTSDTIDVLKCLRCGQDGCTNVPGFGYQGDGPTLCSEHATPVMVQVVALCXXXXXXXXXXXXXXXXXXXXXXXXXXDDGMVDLMKRRSQ 341
MDNTGGGEPDTSDTIDVLKCLRCGQ+GCTNVPG GYQG+GPT+C+EHA+P M+Q+V L XXXXXXXXXXXXXXXXXXXXXXXXXX DLMKRRSQ
Sbjct: 1 MDNTGGGEPDTSDTIDVLKCLRCGQEGCTNVPGLGYQGEGPTMCTEHASPAMIQIVHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLMKRRSQ 98
BLAST of mRNA_H-paniculata_contig1027.184.1 vs. uniprot
Match: A0A6H5KHX5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX5_9PHAE) HSP 1 Score: 127 bits (320), Expect = 5.290e-26 Identity = 155/173 (89.60%), Postives = 161/173 (93.06%), Query Frame = 3
Query: 48 MDNTGGGEPDTSDTIDVLKCLRCGQDGCTNVPGFGYQGDGPTLCSEHATPVMVQVVALCXXXXXXXXXXXXXXXXXXXXXXXXXXDDGMVDLMKRRSQCVVSNXXXXXXXXXXXXXXXXXXXXXXXXXVYLKNXKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVKNCR 566
MDNTGGGEPDTSDTIDVLKCLRCG +GCTNVPG GYQG+GPT+C+EHA P M+Q+V L XXXXXXXXXXXXXXXXXXXXXXXXXX DLMKRRSQCVVS XXXXXXXXXXXXXXXXXXXXXXXXXVYLKNXKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVKNCR
Sbjct: 1 MDNTGGGEPDTSDTIDVLKCLRCGHEGCTNVPGLGYQGEGPTMCTEHAAPAMIQIVHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLMKRRSQCVVSXXXXXXXXXXXXXXXXXXXXXXXXXXVYLKNXKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVKNCR 173
BLAST of mRNA_H-paniculata_contig1027.184.1 vs. uniprot
Match: D7G0X0_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0X0_ECTSI) HSP 1 Score: 121 bits (304), Expect = 3.100e-24 Identity = 148/347 (42.65%), Postives = 174/347 (50.14%), Query Frame = 3
Query: 2073 GYGPG--GGD-GDVVSSASI--SGVLGGRATLRPPQPRIS----VAQPRARRPLPSSPGRHG--VPG----GVLEGS----LEPGRQGGSLSPFVGHQPSS---HLRLPLPPVASG-FSSSFQIPEMSEWDTGHGDDGGNAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWARDPMGHVEYSNPSESSXXXXXXXXXXXXXXXXXXXX--------------FGSRLGVVDLGPGLMPPFDRIQGMSDVQDPSPDAFLGGGSNSGXXXXXXXXGVSGERTNMPSPPA----------SIHEGQVGDVSS--------RPLSPLMPPLGGESGESPPGLPRLR 2948
GYGPG GGD G + SI SGVL GRA L PP + S VAQP ARRPLP SPGR G +PG G+L+G ++ GRQGGSLSPF+GHQ SS HLRLPLPP +G F SFQ +WD D G+ XXXXXXXXXXXXX XXXXXXXXX A P+ HV+Y + FG+RL VDLG G+MP FDR+ G+ + SP F G++ G XXXXX S G G++ + R +SPLM LGGESGE+PPGL RLR
Sbjct: 403 GYGPGAIGGDNGPEIGGGSIPVSGVLSGRAILPPPSQQSSSRGPVAQPHARRPLPPSPGRSGGGIPGMPGSGMLDGXXXXXMDVGRQGGSLSPFIGHQSSSASSHLRLPLPPAMNGPFQPSFQA---LDWD----DPSGSXXXXXXXXXXXXXXVGVQGXXXXXXXXXWPSE----AAVPLSHVDYPHQEAGDMGMGRDDGRRGGDPADGGLDVEGGGGPXXXXXXXFGTRLPGVDLGQGMMPHFDRMHGIGGGRGSSPGPFHSMGADVGGASXXXXXXXXXXXXXXXXXXXXXXXXXXAMHSSSSGAGGEIDALNXXXXXGRSMSPLMSTLGGESGETPPGLARLR 738
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Hectar predicted targeting category | other localisation |
Exons | 4 |
Model size | 3507 |
Cds size | 3423 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1027.184.1 >prot_H-paniculata_contig1027.184.1 ID=prot_H-paniculata_contig1027.184.1|Name=mRNA_H-paniculata_contig1027.184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1141bp
MDNTGGGEPDTSDTIDVLKCLRCGQDGCTNVPGFGYQGDGPTLCSEHATP VMVQVVALCCEHQGCNARRTFGFDGAPARLCATHKDDGMVDLMKRRSQCV VSNCTKLSTYGFEGFLARFCFSHKSHGMVYLKNRKRCEYYECTRQPTYGM DGQRAKFCSSHKEEGMIDVKNCRCKFQGCTRQPNYGHEGGRAKFCSSHKL DKMVNVVSRRCEFPGCKRQPIYGFEGEKATFCPTHRMDAMTDVVNRHCEF SGCTKTPSYGYVGERAQFCSHHHLPDMEDVKNRRCEWQECRRYPIFGHEG ERARFCSAHKTEGMVNVRNRRCEEGNCTKLPTHGFSAGKARYCLNHVKQG MVNLKGRGKSATAGAGSAAGGGGDVGAPLPQKQEADPDQRLPRPVGSVGM TAAAGRQADPDYGGDGRVMLGGIQGGGSGGSSAGPQSERPPGQSGYWGAG LRRPAGGVEQHLYNDRARMQGGSAVMGWGRMPVGGGSGGGGGDASPTSVV SAHQQRPYGSGGIGGGGGGAPHADELRLRRLTEVEAEDQRHRLEHQEMKE QHIRSLQSIRRRPGVVGPGGSDDHFYPQDDYHSHEQQVSPHAQQQHMVMT SQGYLQGGGGQSGMMPRRPMLRDIQHQDMHQMQGYRDQLQPQHHHHQQQQ QQQQQQSRGYGSTPPYSLPQMNASHGYGPGGGDGDVVSSASISGVLGGRA TLRPPQPRISVAQPRARRPLPSSPGRHGVPGGVLEGSLEPGRQGGSLSPF VGHQPSSHLRLPLPPVASGFSSSFQIPEMSEWDTGHGDDGGNAGSGGGGG GGGGGGGGGGGGGGGGGGGGGGGGGGGWARDPMGHVEYSNPSESSGGGGG RGSSLGMEGGGPGAGFGSRLGVVDLGPGLMPPFDRIQGMSDVQDPSPDAF LGGGSNSGGGGGGGSGGVSGERTNMPSPPASIHEGQVGDVSSRPLSPLMP PLGGESGESPPGLPRLRAMNNRGGQDSHRASPAYSPPYLPAASEGSIPSA TSLAALHPQDVPGPPPATGSSSGGRPRISPPFEGLGGSEGGAGVGSAGGA GSGGASSTRGGLDAPVGLHGQGDASEGGGGGGGGGDGGGGGSGEEWVPSV AVGGENRVLAPVGNTGVERGQDEGDDEDPRKRLRIEELLH* back to topmRNA from alignment at H-paniculata_contig1027:12681..23643+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig1027.184.1 ID=mRNA_H-paniculata_contig1027.184.1|Name=mRNA_H-paniculata_contig1027.184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10963bp|location=Sequence derived from alignment at H-paniculata_contig1027:12681..23643+ (Halopteris paniculata Hal_grac_a_UBK monoicous) CGATAGGCTTCTCCTCCTCTTCCAGGTCAGGTTAAAAGACGGGGCAAATG
GACAACACAGGGGGAGGCGAGCCCGACACATCCGACACCATAGACGTCCT
CAAGTGTCTGCGATGCGGACAGGATGGCTGTACCAACGTACCGGGTTTTG
GGTATCAGGGAGATGGCCCAACTCTGTGCAGCGAGCACGCCACGCCGGTG
ATGGTTCAGGTGGTGGCTCTGTGCTGCGAGCACCAGGGGTGCAACGCGAG
GAGGACGTTTGGCTTCGATGGCGCGCCGGCTAGGCTGTGCGCGACACACA
AAGACGACGGGATGGTGGACTTGATGAAGCGTCGAAGCCAGGTGATGTAC
GGCACGGGTGTTTTTTTTTCGAGTTTTTTTCCTGTTGGTAGTATCGTTTT
ATTTCTCGTCTTTATGTTTTTGTGAACCCATATTCTTTTCCATGACTTGA
TGTGTCCAAATGAGGTAGGTGTCTGATCGAAAAGCAAGTGGTCTCCTGCC
AAGGACACCATCAGATGGTGTTGTATTATCTCAAAGCCTCCTCGCGTTGA
AGCAGTACGTTCAGCGCCCCTAGGAAGCACCACGTTTCCATATCTCTCCA
TCTCTCTCTCTCTCTGTCGCTGGCTCGTTCGATGCCATTTTGTTCATCAC
AAATTGACCAGACATCACAAGAAAAGAGTTGTAGTTTGTCATTTCCCTCG
CAAACTTCACGCGTAGGAGAAGCTTTGTGTAGACTTGGCGTCTCAACCAT
GCGGAAATTACCCCTACTCTTTTGTTGGGTTTACAGGATCGTAGATAACG
AATACACAAAGAGTATCGGTGACAGAAAATAGAGAATGGTCACCCAGCTG
CTGCCGTTGAAATCCCCGCTACGCTGTACGTGTATGTTACTACTGCCGGC
TCGAGCAAGGAAAGCGGCACTTGCCGAAGAATATCATCCGGTTCTTGCCA
CTCCTGTGTACTTGCTTTGGTTGACCTCTACTTTTCACTGGTGTTTGTCT
CCTTCTTTTGGTCCCATGGTTGCCAACGAAACTCGGCGACAATTTTTATA
TTTGAACGTTTTTGTAAAAGGGAACGTGCTACTGTTCTCCCAAAGCAATC
TCCCCCCAAGTATCACATATATTATCAAGTGTGTAGGCCCCCCCAAAGCG
TACGTACAAGAATGACGCTGTTCTCTCTTCTACTGTATATCTTTTTTTCG
ACGCAGCTCGTCACCAGATCAAAGAGTTTATACGGACAGCAGAGATAGAC
AGTGGCTCTTCTGTTCCTTGTAGCCAGTATAGTCCGAGTTTCTGCTTGAA
AACAAACCTCAATTTACCCTTTTGGAAGCACTGCTTTCAAAAAGAAATAA
ACCGAGTTATTAACCCGTCATCACCATCTCGTGCGAAAAATTGAAAATTA
TTATGAAAGCCACTGCTCTACATGTTGATTAGCCCACTTGGCCACCGCTT
CTGTATGCCCCTGGCCTTCACTTTCCCGATGACGGCCAATCTCAGCACAC
TATAGTTAGGGGCAACGGTGTTGGATTTACCCGCGTCCCGCGTCTTTGCT
TCAGTATGAAATAGGGTTGATTTTTCATGTTTTCCTCTTGGGTGCAGTTA
TTCAACAGTCTGTTTTTCAGGTTGGAATACATTCGGAGGCGCTGAAGAGG
GGAAAAATAGGGAGATAAATCCCTTAAACAGAAATATATACATACACGCA
AAATCATACACCAACGCTTTTTTATATCCAGAGTTGATCGTTCCTTTGTG
GCCGGCAGTTTGCTACACTACCCCTAGATGTGTCACATACCCTGCTGAGT
ATTATCTGAGGGTCAGCTGCTTGCTGCCCTAATGACATGTGAGACGGCGG
ATTTTGCTCTTGTAGGATAGAGGTTTTTTTTTTTTGCACCATGCCATTTT
TTTTCCCGTCCATCTCTCATAATACTACATAGCAATGTTTAAGATGTATC
TCGCCCCGCCCCTCTCCATACACATACTGCTTCATGGGCTTCGCTTGGTG
GGATGCAGTGCGTTGTGTCGAACTGTACCAAGCTCTCCACCTATGGCTTC
GAGGGCTTTCTTGCGCGATTCTGCTTCAGCCATAAGTCCCACGGAATGGT
CTACCTCAAGAATCGAAAGAGGTAAGCCAAAGAGTGTTCGGGAGGTTTCT
GCGGTGGGGAGCGTTGAGAAGGAGGGGGTGGGGCATTACTGACTGTACTA
TATATCAGTCACTACGGTACTTCCTGACTTCGCGCTCCTGGCACTAAAGC
TCAAGTTCAAAAATATTTATATTTTTCGTTTCTTGTTGAAAGAATAAACA
TGAACATTTTCGGCATTTGTCCGCTTTTTCACTGATGCGGGAAATATCTG
GTTTGGATGTTGTGAAGACCCGAACACCTCTCCCCCCTCCTCCCTGCTGA
GCGCCGCGCACAGCAGGGTTATATTTGTGGGTGTTGTTGCTACTCGGTGA
TTTTGGATGTGCAAGAGACACGTAGCTCGCTCCTGTCTCCTTGTCCAGTA
TTCCCCGTTCCACGTCAGCTTGGCATGTGATAACTTGCTGTTCTTTTCAA
TACAGAGAGTAGTCGAAGACGGTAGAACCCTAGTGTAACTGGCTCCAGCG
TAGTTGGGCAGCGGTGTCGGGGTTTTCAGTCGCACACTTGGGAATCATGT
GAATAGTACACATGTTGTTCAATATACACCGTTTCATGAATTATGTTTTC
GGTGTTGCAGCGGAAAATTACTGTCAGTTTTTTCGTTCGTCCATGTTCCA
GAAAAGTGCGACAGGTGTGTACACGTAACGGGCAAGGCGGAAGATGCTAA
CTTGAGGAATGCATGATACAAATCGCTTGTGCATAAGGACCTGTCTCATG
TACACCAACGTGCTATCTATTTTTTTCATTTCTTGTTCACGTACCTAAAA
CTACATCCATACATGATATGATATCATCTCTCGGACAAATATGAATACTA
GCGAATGGTTTTAGAAAAAAACGGAAAGTATTCGCCGGAGTGTCAGAATG
AGTTTGTGTATTCTATGTGCCCCCGACCATCCACGACTGACTGCTAAGAA
TACTGGTAAGAATCGAATGGACAGGCGTGTGGGTCCTTTACTCTCCATGT
CCGCTCTTTCTGAAACTCAGACGAATACTTTGAATTTTTGTGAAAAACCA
TTTCCAAGTATTCGTATTTGTCCAAAGGTGTATTATATATTGGATGAAAA
TGTGGAAAACGCCGTAGAAGGTGACTTTCGGCTCGCAGAGCATTGCAAGC
TGACTTCGCAGTTTTGTTTTCAGCCGGTCATTATATGGATGGGTGTATAT
TCAGAAACGTGAAATGGGGATGCAGGTTTCCTCCTGAGGATATCATGTGG
TTTTCCAGCCTTTCTCTGACGTCAGGTAGTAGGGTTTCTTAGCGATGAGG
CTTTCGTATATTACGTTCCGCATTATTTATCATTCAGTCGGTCTCTGATT
TGTCGAAATGAAATCTGTTGGCACCGAACAGACGTTTCTCGTCTTGATGT
GTGTGGAGCGACGTGGGGAACATGAGGTATAGTTGTTTAAAAAAATATAT
ATATGCTTGCCATTGGACGAATCAATGTACAGAATCGGATATTGGCGTTT
CACAGTCATCGAGAATTAAGAGAGGTAGGTTACCCAGAAGAAAAACCAAA
GAAAATGCAATCCTCTGACGAACGTTCCCCACTGCTCAGAAATGAAGCAA
TATGCATATATCACTCCTCATGTCTAATGATGGTGGCATATTATTTTTTT
TTTTGTGATTTTCTGTTCTGTATTCATGCATTTCGTTTTTTTGTTGTTCC
GCTTTTTTTTTGGTATTGACGATTTTCTGTGAGACGTACTGGAAAATGAC
TGTAAACTCGAATTGTCAGTATATTTGCTCAGCTGAGAACCCTCACCGCA
CAAAATCTGTATTTTTTCTTTTCTGTTGGATTGTGCCGGAGGGGTACACG
GAGAGCTTGAACTGTCTGTGAAGTAGGTATGATTAACTAGTAACACTATA
ATTCGGAGAGAACTCAATTTAATTATTCCGTTGTATTGTCGAGACAGGCA
GTGAATATAGTCAGTCAGTCTTCAGTAGTGGCTCGATGGTAAGAAGCAAA
TGCTCATTTCTCATTTCGGGGTGAGGCTCCTAGCCCTGGGCACTATAGAG
TCCCTACTTGAAAAAAGCAAAACCACACGATTTTTTTTTTCTGATGGATG
CTCACGACATGATTATGGGGATATGGAACTAGCTAGCTTCACAGACGTTA
CAAACAGTCCTGTAATTATAGAAACTCAAAACAGCAAGAGTTGGCATGCC
TTTCGCATTCCACAACAGCAGCACTTGATGGAAACGCGAAGCACGAACCA
CGTTATACGTGTCTGACCGTAGAGGGTTATGTTCGCCGCACAAGGCCGTA
CGTAAAGACATGCAATCAAACACACCATGGTTCTCGCGGCGTTGCACGGA
CGCTCGCAGATGTTGCAGACAGCAAAAAGGCAGAAAAAGTTGCGCGCAAC
TGCGTCTGCGTCATCGTTGAAAGCGTTGGCCGCAGCCACGATGGTAGGGT
ACTCAGGCATTGTATTCAATGCCGTTGGTCGCTCTTATCCTGGCTGTTGG
TACTATTCTTTTGTTACGCTCACAAAGCATAGCCAACCCAAAATAATATC
GCCCTAAAATAACACGGCAGCTCAAAATGGAACGACCAAATCTGCACGTT
TGATCGACCCTCAACCACCGGACGATTCCTGTGGGTATTTTGTGACCTCG
AACAACTTGGCTCATGTATGGAAAATTAAAATTTATTGAGAGTAGACTTG
GTAAAAACAGTATTCTTTATTGAGAGTCGGGCCAATCCTGCAACTTCGTG
TAAAAAACAGTATTCTTTATTGAGAATAGGCGGGTACTGCAAAGTGGCTT
TTTATGATGACTTTGGGTCATGTTTCATGATTTTCCCTGACTTTCAATTT
ATTAACCATTCAGGGGCTTTTAACTCAAGAGGTTGTTTCGGGAAAAAATG
GGTGACAACGAATATTGAGCGCTGCAGTCGTTGCTTGCACGACTATGCCA
AGTGGTACCAACTGTCATCTCAATAAATGGCTTCCCATAATTGCCTCGTA
AGCGCTGTAATTCCTTGTTTTTTTGGTGAAGGTTGGATGGGTACTATGAG
ATGGAAACCGGAGCCGAAAGAGTTGGATCACGGCCGCTACTGTACATACA
TAAAGGTTGTCTGCAGCTGTTTCGGGGGTGCTGGAGGAGATGTAGTTCCA
GTATCAGTTGCGTCGCATAGCGTTGTACATCAGGGGACAGGGTGCATCCT
CTTTACACCTCAGTACATCACAGTTGCTAAACCATACAGTGACATACATT
TACTGGAACTACATCTATCTCCGCCGTCATCGCCTTCAAAGGCAAAATCC
TCGTGTTCACTCGAGTACCTAAACTATATAAAACCAACGTCAAACAGCAG
CCACACAGCGTGGTTCACTGACTGATCACACCTGAATAAAAAAAACACAC
ATACATTTAAGTCAGCCGTTGCCCCTCCTTGTACCCATATATGCCGTGTT
TTCTTTTTTTTCTGTGCCCTGTGCCCAACCCAACCCAACTCAACCCAACC
TTTTCAGGTGTGAGTACTACGAATGTACGCGACAGCCGACGTACGGTATG
GATGGGCAAAGGGCTAAATTCTGCTCCTCTCACAAAGAGGAAGGTATGAT
CGATGTGAAAAACTGTCGATGCAAGTTCCAGGGTTGTACGAGACAGCCTA
ACTACGGTCACGAGGGGGGCCGAGCCAAGTTTTGTTCCTCTCACAAGCTG
GACAAGATGGTAAACGTTGTCAGCCGAAGATGCGAGTTTCCAGGTTGCAA
ACGTCAGGTAATGACCAATTCTTGAACGTCGGTTTTCTGGATGAAGTCTT
ATGGTGGCCGCAGCCAGCAGGCTGGTATGGATCTCTTTTGACTTTTTTTC
AGGGTACACGGATTTGAGCGGATCTAAGGTATTCATGTGGGAGCTGCTGC
CAAGAGCTTGTCATCGCACCCATCAGCAGCGCTGGTTTCGTAGTAAAATG
CTCCTGGTGGCGTGATGACTCGTTTTGGGCGGTCGCGCAGAGGGTACTTC
ACGGGACAGAACACTTCAGATGTCAACGAAAATGCGAAACCCAAAGAACG
GATACGTACCTTTGGAAAGCTCATTCTTCCTCAAATATCGACGAAAGCGG
GGCATTAGTTCATCTCTTGCGCCCTACAAGCGAAAAAAATCAAATCTTGC
CCATACAAATGATATTTCAGCTTCGGTTCAAAGTTCGAGTAGTTTAGGGT
CAGTTTGCATTTGACCCGAGGATGCGGCCATCAGGCACCCTCCCCTCGCC
AAAGTAGGGGCGCTTGGCTCTTTTGGCATGAGAAAAGCTGGACATAATGT
TCAAGCTTTGCGTACACTGTCGTGGTTTTTCGGGGGGGGTTAAGTCGGAA
CAAACAGCCAGTGTTTTTGTCTGCGGCAAAACCGTGTTTCAACTTTGTTC
ATGACGGAACAGCTGACGATGCTTGTCACGTAAACTTCATACGATACAAA
TTTCTCCAATCACCTTGACAGCTGAACAATGCTTGCGCCACATATCAATG
CTGTCATATGAACTATAACGTCCATCAAAAATATAAATTTGGCAAGTTAC
TGCTGGTCAACGAAAATTTAGTCTCTTGGCAGCTGCCATCTTTTTGTAAA
TCATCGGTTCGAGAAGGTTCTCGATTTTTTTTGCGGTACGCGCTTTCGGC
CCCTTGCCAACAGTCACGTCCGAGTCTGCACATGTCGGAAGGTAAACATG
CCTAAAAATCTTGAGTATCAGGTGTATGTACCAGGGGTCTTTAGTTGTTG
TGCTTTATTTCTGTGCGTGCGTGTACGCGCTCATGAAGAAAAAACGCTGG
CAGGTTTCTCTGTTTGTAATGGCGCTGATCACGGACTTTCTCAGGCAGAA
AGAAGAGCATGGTTTTCTGGTGATGGTGAACGCATCATCTTTTTTTCGTG
CTGGGGCATAGGTGTGGCTGGCCTGTAGCCTTGTTTTACGTCATTTTCGA
CACCTCGGCTAAAGGTGATTGAAGTTCGTTATTGACTTCACGACGTGAAT
ATGGCTGCACGTGGGTATTAGCACCTTCCAAAACCCGTCAAATCGGTGGT
AGCATGACAAAAACGGAGGTCGCTCCTTCACGTCTCCATGGGGTGTTCGA
TTTCGGGGTAGGAACGTCTTTGCACACATTCATCTATTTGACGAGTTTCA
AGGTTGGTCAAAGGTCCACGGTTCTCATGAAATAGATATTTCTACTAAAA
CAACATGGAGAAAAAAAACCTTTGTCCGAGCTGTGGTCATTTCCCCCCTG
TACAGCCAAGGGTACGGTGTGTCCCTTTAATATATACGCAAACTATTAAC
GAGGTTCGAAGAGCTCGTCACCAAGGATGTAAGGATTCATACCATCATGT
GAAGCTACGAGCATCGACATTGTCACCTCATTGCAACATAAGTACGTCCC
CAACCCCTCCCTCTCCCCCTTTTCGCTTGTCTGTATCGATACTTCTGTAC
GTTTTATTCCATATATTTGGCGCCGATTTTTTCTATACCCATCCGATGCC
TCTATCTGGTGCTTTCTTGACCGTGACGGCAAATGTTGTACGCGACACAA
ATTCGTCGTAGTGGGAGAAAAATTCAGTGCATTTTCGACGTATGCGCGTG
GCCGTTTCACCTTATGGATGCAGCTGTTGGATTTTCGCGTAAACGTTGGT
TTTGTCTCGATATTAACCTCAACACCTATTTCTGGTTCGCCTATTTACGT
TTGCCGTCGTAAATGTGTAAATCTGTTTTTTTTCTCATGAACACCGCCAG
GATAGGTTCATTTTTTCCAGTTGTCACCACAATGATGTGCTTGTCGGATT
TTTCACCATTTTTACAGCCTGTGAACAGTACAGTGGCGCGGAATGGCTTT
TTTTTTTCGCAAAGTTATGCCCCAGGTTACGACTATATCACCGTGAATAC
TTGGCGCAAAATCATATGCCCGGTTACGACTTCAACTACTCTGCCCCTTC
CACTGATCCCCCCTACCCTCGCGTCCACCCCCTCCGCTTGTAATGCCGGG
TCGTTCTACCGATTGTGCGTCCTCTTTTTTCGGATAACTTGTCGGAATGT
GACATACCAGCCGATTTATGGATTCGAGGGCGAAAAGGCTACCTTCTGTC
CAACCCACAGAATGGACGCGATGACAGACGTTGTGAACCGCCACTGTGAG
TTCAGCGGGTGCACGAAAACCCCGAGCTACGGCTACGTGGGCGAGCGGGC
GCAGTTCTGCTCCCACCACCACCTCCCGGACATGGAAGACGTAAAGAATC
GACGGTGCGAGTGGCAAGAGTGTCGACGTTACCCCATCTTCGGGCACGAG
GGGGAGCGCGCGCGATTCTGCTCGGCCCACAAGACGGAGGGCATGGTGAA
CGTCCGCAATCGGCGATGCGAGGAGGGGAACTGCACGAAGCTGCCGACGC
ACGGCTTTTCCGCGGGAAAGGCGAGGTATTGCCTCAACCACGTCAAGCAG
GGCATGGTGAACCTGAAGGGCAGGGGGAAGAGTGCTACGGCAGGGGCAGG
GTCGGCAGCGGGGGGGGGCGGGGATGTCGGGGCGCCGCTGCCTCAAAAGC
AAGAAGCGGACCCAGATCAGCGACTGCCTAGACCGGTGGGGAGTGTGGGC
ATGACAGCAGCGGCCGGCAGACAAGCCGACCCTGACTACGGAGGGGACGG
AAGGGTTATGCTTGGCGGGATCCAAGGCGGCGGCAGTGGTGGTAGTAGTG
CGGGCCCACAGAGTGAACGCCCCCCGGGACAGAGTGGATATTGGGGTGCG
GGACTTAGGAGGCCAGCCGGTGGAGTAGAGCAGCATTTATACAATGACCG
GGCACGTATGCAAGGGGGCAGTGCAGTGATGGGATGGGGAAGAATGCCAG
TAGGGGGAGGCAGCGGCGGCGGCGGCGGCGACGCAAGTCCAACGAGTGTC
GTTTCTGCGCATCAGCAGCGGCCATACGGATCTGGGGGCATCGGCGGCGG
GGGCGGGGGGGCTCCTCATGCCGACGAGTTGCGATTGAGAAGACTGACGG
AGGTGGAGGCGGAGGACCAACGGCACCGACTCGAGCATCAGGAGATGAAG
GAGCAGCACATTCGGTCGCTGCAGTCGATTCGGCGTCGGCCTGGGGTGGT
CGGTCCCGGCGGATCGGATGATCACTTTTACCCGCAAGATGACTACCATT
CGCACGAGCAACAGGTGTCCCCGCACGCTCAGCAGCAGCACATGGTGATG
ACTTCCCAGGGGTATCTTCAAGGGGGCGGGGGACAGTCGGGGATGATGCC
CCGTCGGCCCATGCTTCGCGATATACAGCACCAGGACATGCACCAGATGC
AAGGCTACCGGGATCAGCTGCAACCTCAACATCATCACCACCAGCAGCAG
CAGCAGCAACAACAGCAGCAATCACGCGGTTATGGAAGCACACCCCCGTA
CTCATTACCCCAAATGAACGCGAGCCACGGCTATGGACCAGGGGGGGGTG
ACGGCGACGTTGTGAGTAGCGCTTCCATATCGGGCGTGCTGGGCGGGCGC
GCTACACTGCGCCCCCCACAGCCTAGGATATCTGTCGCGCAGCCGCGCGC
TCGACGGCCGCTACCTAGCTCCCCCGGTCGGCACGGTGTACCGGGAGGAG
TTCTTGAAGGCTCCTTGGAGCCAGGAAGGCAAGGCGGAAGCCTTTCTCCG
TTTGTGGGGCACCAGCCATCATCCCACCTTCGACTCCCCCTGCCCCCAGT
CGCTTCTGGTTTCTCGTCGTCTTTTCAGATTCCAGAGATGTCAGAGTGGG
ATACAGGTCACGGCGATGACGGGGGCAACGCTGGGAGCGGGGGCGGGGGC
GGCGGGGGCGGCGGGGGCGGCGGTGGCGGCGGTGGCGGCGGCGGCGGCGG
CGGCGGCGGCGGCGGCGGGGGGGGTGGCGGCGGATGGGCAAGAGATCCTA
TGGGCCATGTAGAATATTCTAATCCATCAGAAAGCAGCGGTGGCGGTGGT
GGTAGAGGGAGCTCTCTGGGTATGGAGGGTGGAGGACCTGGGGCGGGGTT
TGGCTCACGCCTGGGAGTTGTTGACCTGGGACCAGGGCTCATGCCGCCGT
TCGATCGCATCCAAGGTATGAGCGACGTCCAGGATCCCTCTCCGGATGCA
TTTCTCGGGGGTGGCAGCAACAGTGGTGGCGGTGGTGGTGGTGGCAGCGG
CGGCGTGTCGGGAGAAAGGACGAACATGCCTTCCCCCCCGGCATCCATCC
ACGAGGGTCAAGTCGGTGACGTGTCGTCTCGCCCTCTTTCTCCCCTGATG
CCCCCACTCGGCGGTGAGTCCGGAGAGTCCCCGCCAGGATTACCCCGCTT
GCGCGCGATGAATAACCGAGGGGGTCAAGATTCGCACAGGGCTTCTCCCG
CGTATTCTCCTCCCTATCTCCCCGCAGCGTCCGAAGGGTCGATACCGTCG
GCGACGAGCTTGGCGGCCCTGCACCCACAGGACGTGCCCGGGCCGCCGCC
AGCCACCGGTTCGTCGTCGGGTGGTCGCCCACGAATTTCGCCGCCCTTCG
AAGGTCTCGGGGGGTCAGAGGGAGGTGCTGGGGTTGGTAGCGCTGGTGGA
GCCGGTAGTGGCGGTGCGTCGTCCACACGTGGGGGCTTGGATGCGCCTGT
TGGTCTGCACGGACAGGGCGACGCTTCTGAGGGAGGCGGAGGGGGCGGCG
GTGGAGGTGATGGTGGAGGTGGTGGTAGCGGTGAGGAATGGGTGCCATCT
GTCGCCGTTGGGGGCGAGAATCGGGTGCTAGCGCCGGTAGGGAACACGGG
GGTGGAGAGGGGTCAAGATGAAGGTGATGACGAGGATCCCCGGAAGCGAC
TGAGGATCGAGGAGTTGCTTCATTAGCAGTGTTCTCGAGGCCTGGTGGCT
CTTTCGTCGACCG back to topCoding sequence (CDS) from alignment at H-paniculata_contig1027:12681..23643+ >mRNA_H-paniculata_contig1027.184.1 ID=mRNA_H-paniculata_contig1027.184.1|Name=mRNA_H-paniculata_contig1027.184.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6846bp|location=Sequence derived from alignment at H-paniculata_contig1027:12681..23643+ (Halopteris paniculata Hal_grac_a_UBK monoicous) ATGGACAACACAGGGGGAGGCGAGCCCGACACATCCGACACCATAGACGT CCTCAAGTGTCTGCGATGCGGACAGGATGGCTGTACCAACGTACCGGGTT TTGGGTATCAGGGAGATGGCCCAACTCTGTGCAGCGAGCACGCCACGCCG GTGATGGTTCAGGTGGTGGCTCTGTGCTGCGAGCACCAGGGGTGCAACGC GAGGAGGACGTTTGGCTTCGATGGCGCGCCGGCTAGGCTGTGCGCGACAC ACAAAGACGACGGGATGGTGGACTTGATGAAGCGTCGAAGCCAGATGGAC AACACAGGGGGAGGCGAGCCCGACACATCCGACACCATAGACGTCCTCAA GTGTCTGCGATGCGGACAGGATGGCTGTACCAACGTACCGGGTTTTGGGT ATCAGGGAGATGGCCCAACTCTGTGCAGCGAGCACGCCACGCCGGTGATG GTTCAGGTGGTGGCTCTGTGCTGCGAGCACCAGGGGTGCAACGCGAGGAG GACGTTTGGCTTCGATGGCGCGCCGGCTAGGCTGTGCGCGACACACAAAG ACGACGGGATGGTGGACTTGATGAAGCGTCGAAGCCAGTGCGTTGTGTCG AACTGTACCAAGCTCTCCACCTATGGCTTCGAGGGCTTTCTTGCGCGATT CTGCTTCAGCCATAAGTCCCACGGAATGGTCTACCTCAAGAATCGAAAGA GTGCGTTGTGTCGAACTGTACCAAGCTCTCCACCTATGGCTTCGAGGGCT TTCTTGCGCGATTCTGCTTCAGCCATAAGTCCCACGGAATGGTCTACCTC AAGAATCGAAAGAGGTGTGAGTACTACGAATGTACGCGACAGCCGACGTA CGGTATGGATGGGCAAAGGGCTAAATTCTGCTCCTCTCACAAAGAGGAAG GTATGATCGATGTGAAAAACTGTCGATGCAAGTTCCAGGGTTGTACGAGA CAGCCTAACTACGGTCACGAGGGGGGCCGAGCCAAGTTTTGTTCCTCTCA CAAGCTGGACAAGATGGTAAACGTTGTCAGCCGAAGATGCGAGTTTCCAG GTTGCAAACGTCAGGTGTGAGTACTACGAATGTACGCGACAGCCGACGTA CGGTATGGATGGGCAAAGGGCTAAATTCTGCTCCTCTCACAAAGAGGAAG GTATGATCGATGTGAAAAACTGTCGATGCAAGTTCCAGGGTTGTACGAGA CAGCCTAACTACGGTCACGAGGGGGGCCGAGCCAAGTTTTGTTCCTCTCA CAAGCTGGACAAGATGGTAAACGTTGTCAGCCGAAGATGCGAGTTTCCAG GTTGCAAACGTCAGCCGATTTATGGATTCGAGGGCGAAAAGGCTACCTTC TGTCCAACCCACAGAATGGACGCGATGACAGACGTTGTGAACCGCCACTG TGAGTTCAGCGGGTGCACGAAAACCCCGAGCTACGGCTACGTGGGCGAGC GGGCGCAGTTCTGCTCCCACCACCACCTCCCGGACATGGAAGACGTAAAG AATCGACGGTGCGAGTGGCAAGAGTGTCGACGTTACCCCATCTTCGGGCA CGAGGGGGAGCGCGCGCGATTCTGCTCGGCCCACAAGACGGAGGGCATGG TGAACGTCCGCAATCGGCGATGCGAGGAGGGGAACTGCACGAAGCTGCCG ACGCACGGCTTTTCCGCGGGAAAGGCGAGGTATTGCCTCAACCACGTCAA GCAGGGCATGGTGAACCTGAAGGGCAGGGGGAAGAGTGCTACGGCAGGGG CAGGGTCGGCAGCGGGGGGGGGCGGGGATGTCGGGGCGCCGCTGCCTCAA AAGCAAGAAGCGGACCCAGATCAGCGACTGCCTAGACCGGTGGGGAGTGT GGGCATGACAGCAGCGGCCGGCAGACAAGCCGACCCTGACTACGGAGGGG ACGGAAGGGTTATGCTTGGCGGGATCCAAGGCGGCGGCAGTGGTGGTAGT AGTGCGGGCCCACAGAGTGAACGCCCCCCGGGACAGAGTGGATATTGGGG TGCGGGACTTAGGAGGCCAGCCGGTGGAGTAGAGCAGCATTTATACAATG ACCGGGCACGTATGCAAGGGGGCAGTGCAGTGATGGGATGGGGAAGAATG CCAGTAGGGGGAGGCAGCGGCGGCGGCGGCGGCGACGCAAGTCCAACGAG TGTCGTTTCTGCGCATCAGCAGCGGCCATACGGATCTGGGGGCATCGGCG GCGGGGGCGGGGGGGCTCCTCATGCCGACGAGTTGCGATTGAGAAGACTG ACGGAGGTGGAGGCGGAGGACCAACGGCACCGACTCGAGCATCAGGAGAT GAAGGAGCAGCACATTCGGTCGCTGCAGTCGATTCGGCGTCGGCCTGGGG TGGTCGGTCCCGGCGGATCGGATGATCACTTTTACCCGCAAGATGACTAC CATTCGCACGAGCAACAGGTGTCCCCGCACGCTCAGCAGCAGCACATGGT GATGACTTCCCAGGGGTATCTTCAAGGGGGCGGGGGACAGTCGGGGATGA TGCCCCGTCGGCCCATGCTTCGCGATATACAGCACCAGGACATGCACCAG ATGCAAGGCTACCGGGATCAGCTGCAACCTCAACATCATCACCACCAGCA GCAGCAGCAGCAACAACAGCAGCAATCACGCGGTTATGGAAGCACACCCC CGTACTCATTACCCCAAATGAACGCGAGCCACGGCTATGGACCAGGGGGG GGTGACGGCGACGTTGTGAGTAGCGCTTCCATATCGGGCGTGCTGGGCGG GCGCGCTACACTGCGCCCCCCACAGCCTAGGATATCTGTCGCGCAGCCGC GCGCTCGACGGCCGCTACCTAGCTCCCCCGGTCGGCACGGTGTACCGGGA GGAGTTCTTGAAGGCTCCTTGGAGCCAGGAAGGCAAGGCGGAAGCCTTTC TCCGTTTGTGGGGCACCAGCCATCATCCCACCTTCGACTCCCCCTGCCCC CAGTCGCTTCTGGTTTCTCGTCGTCTTTTCAGATTCCAGAGATGTCAGAG TGGGATACAGGTCACGGCGATGACGGGGGCAACGCTGGGAGCGGGGGCGG GGGCGGCGGGGGCGGCGGGGGCGGCGGTGGCGGCGGTGGCGGCGGCGGCG GCGGCGGCGGCGGCGGCGGCGGGGGGGGTGGCGGCGGATGGGCAAGAGAT CCTATGGGCCATGTAGAATATTCTAATCCATCAGAAAGCAGCGGTGGCGG TGGTGGTAGAGGGAGCTCTCTGGGTATGGAGGGTGGAGGACCTGGGGCGG GGTTTGGCTCACGCCTGGGAGTTGTTGACCTGGGACCAGGGCTCATGCCG CCGTTCGATCGCATCCAAGGTATGAGCGACGTCCAGGATCCCTCTCCGGA TGCATTTCTCGGGGGTGGCAGCAACAGTGGTGGCGGTGGTGGTGGTGGCA GCGGCGGCGTGTCGGGAGAAAGGACGAACATGCCTTCCCCCCCGGCATCC ATCCACGAGGGTCAAGTCGGTGACGTGTCGTCTCGCCCTCTTTCTCCCCT GATGCCCCCACTCGGCGGTGAGTCCGGAGAGTCCCCGCCAGGATTACCCC GCTTGCGCGCGATGAATAACCGAGGGGGTCAAGATTCGCACAGGGCTTCT CCCGCGTATTCTCCTCCCTATCTCCCCGCAGCGTCCGAAGGGTCGATACC GTCGGCGACGAGCTTGGCGGCCCTGCACCCACAGGACGTGCCCGGGCCGC CGCCAGCCACCGGTTCGTCGTCGGGTGGTCGCCCACGAATTTCGCCGCCC TTCGAAGGTCTCGGGGGGTCAGAGGGAGGTGCTGGGGTTGGTAGCGCTGG TGGAGCCGGTAGTGGCGGTGCGTCGTCCACACGTGGGGGCTTGGATGCGC CTGTTGGTCTGCACGGACAGGGCGACGCTTCTGAGGGAGGCGGAGGGGGC GGCGGTGGAGGTGATGGTGGAGGTGGTGGTAGCGGTGAGGAATGGGTGCC ATCTGTCGCCGTTGGGGGCGAGAATCGGGTGCTAGCGCCGGTAGGGAACA CGGGGGTGGAGAGGGGTCAAGATGAAGGTGATGACGAGGATCCCCGGAAG CGACTGAGGATCGAGGAGTTGCTTCATTAGCCGATTTATGGATTCGAGGG CGAAAAGGCTACCTTCTGTCCAACCCACAGAATGGACGCGATGACAGACG TTGTGAACCGCCACTGTGAGTTCAGCGGGTGCACGAAAACCCCGAGCTAC GGCTACGTGGGCGAGCGGGCGCAGTTCTGCTCCCACCACCACCTCCCGGA CATGGAAGACGTAAAGAATCGACGGTGCGAGTGGCAAGAGTGTCGACGTT ACCCCATCTTCGGGCACGAGGGGGAGCGCGCGCGATTCTGCTCGGCCCAC AAGACGGAGGGCATGGTGAACGTCCGCAATCGGCGATGCGAGGAGGGGAA CTGCACGAAGCTGCCGACGCACGGCTTTTCCGCGGGAAAGGCGAGGTATT GCCTCAACCACGTCAAGCAGGGCATGGTGAACCTGAAGGGCAGGGGGAAG AGTGCTACGGCAGGGGCAGGGTCGGCAGCGGGGGGGGGCGGGGATGTCGG GGCGCCGCTGCCTCAAAAGCAAGAAGCGGACCCAGATCAGCGACTGCCTA GACCGGTGGGGAGTGTGGGCATGACAGCAGCGGCCGGCAGACAAGCCGAC CCTGACTACGGAGGGGACGGAAGGGTTATGCTTGGCGGGATCCAAGGCGG CGGCAGTGGTGGTAGTAGTGCGGGCCCACAGAGTGAACGCCCCCCGGGAC AGAGTGGATATTGGGGTGCGGGACTTAGGAGGCCAGCCGGTGGAGTAGAG CAGCATTTATACAATGACCGGGCACGTATGCAAGGGGGCAGTGCAGTGAT GGGATGGGGAAGAATGCCAGTAGGGGGAGGCAGCGGCGGCGGCGGCGGCG ACGCAAGTCCAACGAGTGTCGTTTCTGCGCATCAGCAGCGGCCATACGGA TCTGGGGGCATCGGCGGCGGGGGCGGGGGGGCTCCTCATGCCGACGAGTT GCGATTGAGAAGACTGACGGAGGTGGAGGCGGAGGACCAACGGCACCGAC TCGAGCATCAGGAGATGAAGGAGCAGCACATTCGGTCGCTGCAGTCGATT CGGCGTCGGCCTGGGGTGGTCGGTCCCGGCGGATCGGATGATCACTTTTA CCCGCAAGATGACTACCATTCGCACGAGCAACAGGTGTCCCCGCACGCTC AGCAGCAGCACATGGTGATGACTTCCCAGGGGTATCTTCAAGGGGGCGGG GGACAGTCGGGGATGATGCCCCGTCGGCCCATGCTTCGCGATATACAGCA CCAGGACATGCACCAGATGCAAGGCTACCGGGATCAGCTGCAACCTCAAC ATCATCACCACCAGCAGCAGCAGCAGCAACAACAGCAGCAATCACGCGGT TATGGAAGCACACCCCCGTACTCATTACCCCAAATGAACGCGAGCCACGG CTATGGACCAGGGGGGGGTGACGGCGACGTTGTGAGTAGCGCTTCCATAT CGGGCGTGCTGGGCGGGCGCGCTACACTGCGCCCCCCACAGCCTAGGATA TCTGTCGCGCAGCCGCGCGCTCGACGGCCGCTACCTAGCTCCCCCGGTCG GCACGGTGTACCGGGAGGAGTTCTTGAAGGCTCCTTGGAGCCAGGAAGGC AAGGCGGAAGCCTTTCTCCGTTTGTGGGGCACCAGCCATCATCCCACCTT CGACTCCCCCTGCCCCCAGTCGCTTCTGGTTTCTCGTCGTCTTTTCAGAT TCCAGAGATGTCAGAGTGGGATACAGGTCACGGCGATGACGGGGGCAACG CTGGGAGCGGGGGCGGGGGCGGCGGGGGCGGCGGGGGCGGCGGTGGCGGC GGTGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGGGGGGGTGGCGG CGGATGGGCAAGAGATCCTATGGGCCATGTAGAATATTCTAATCCATCAG AAAGCAGCGGTGGCGGTGGTGGTAGAGGGAGCTCTCTGGGTATGGAGGGT GGAGGACCTGGGGCGGGGTTTGGCTCACGCCTGGGAGTTGTTGACCTGGG ACCAGGGCTCATGCCGCCGTTCGATCGCATCCAAGGTATGAGCGACGTCC AGGATCCCTCTCCGGATGCATTTCTCGGGGGTGGCAGCAACAGTGGTGGC GGTGGTGGTGGTGGCAGCGGCGGCGTGTCGGGAGAAAGGACGAACATGCC TTCCCCCCCGGCATCCATCCACGAGGGTCAAGTCGGTGACGTGTCGTCTC GCCCTCTTTCTCCCCTGATGCCCCCACTCGGCGGTGAGTCCGGAGAGTCC CCGCCAGGATTACCCCGCTTGCGCGCGATGAATAACCGAGGGGGTCAAGA TTCGCACAGGGCTTCTCCCGCGTATTCTCCTCCCTATCTCCCCGCAGCGT CCGAAGGGTCGATACCGTCGGCGACGAGCTTGGCGGCCCTGCACCCACAG GACGTGCCCGGGCCGCCGCCAGCCACCGGTTCGTCGTCGGGTGGTCGCCC ACGAATTTCGCCGCCCTTCGAAGGTCTCGGGGGGTCAGAGGGAGGTGCTG GGGTTGGTAGCGCTGGTGGAGCCGGTAGTGGCGGTGCGTCGTCCACACGT GGGGGCTTGGATGCGCCTGTTGGTCTGCACGGACAGGGCGACGCTTCTGA GGGAGGCGGAGGGGGCGGCGGTGGAGGTGATGGTGGAGGTGGTGGTAGCG GTGAGGAATGGGTGCCATCTGTCGCCGTTGGGGGCGAGAATCGGGTGCTA GCGCCGGTAGGGAACACGGGGGTGGAGAGGGGTCAAGATGAAGGTGATGA CGAGGATCCCCGGAAGCGACTGAGGATCGAGGAGTTGCTTCATTAG back to top
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