mRNA_H-paniculata_contig10262.176.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10262.176.1 vs. uniprot
Match: A0A6H5K7Z1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z1_9PHAE) HSP 1 Score: 194 bits (492), Expect = 4.580e-51 Identity = 94/204 (46.08%), Postives = 132/204 (64.71%), Query Frame = 1 Query: 166 ALYPNCSGIFSWINDSICDERNNNPACGYDGGDCCVCTASH-QFLPARVTCLDPSAGQALYDCREPPPITASCANDTVEEWIVEDTASATALAEAVDCSGGAFQVKWRGIVAIDRTIYVGAGTILNITGLDSMACIDGNDTHRLFTVVNASLNIDNLKLSRGNAAAGGAIAASTSRVALHNTSFISNVAYSEGGALFIIDTSTV 774 A +P+C+G + + D C E NNN CGYDGGDCCVC+ + CLDPSA + L+DC PP+ C D + W+VE +A A ALA AV+CSGG F+V+WRG V + V GT+L ++G DS A ++GN + R+FTVVNA+L + + +S G++ GGAIAA+ S + L+ TSF+ N A S GGA+++ D S+V Sbjct: 120 AEFPDCTGDYLTVGDGSCSEANNNDLCGYDGGDCCVCSCQGVNCMTTSFECLDPSASEELHDCEPSPPLALPCTADAQQTWVVESSAQAQALAAAVNCSGGLFEVEWRGRVVVGEPFNVVDGTVLTVSGADSSAVVEGNASTRIFTVVNANLYLSGVNVSYGSSTVGGAIAAARSSLTLNGTSFVGNAASSYGGAIYLSDGSSV 323
BLAST of mRNA_H-paniculata_contig10262.176.1 vs. uniprot
Match: D7FTI5_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI5_ECTSI) HSP 1 Score: 193 bits (490), Expect = 8.610e-51 Identity = 102/237 (43.04%), Postives = 142/237 (59.92%), Query Frame = 1 Query: 94 VATQSISSYSSFWNYSSTYSSVDPALY--------PNCSGIFSWINDSICDERNNNPACGYDGGDCCVCTASHQFLPARVTCLDPSAGQALYDCREPPPITASCANDTVEEWIVEDTASATALAEAVDCSGGAFQVKWRGIVAIDRTIYVGAGTILNITGL--------DSMACIDGNDTHRLFTVVNASLNIDNLKLSRGNAAAGGAIAASTSRVALHNTSFISNVAYSEGGALFI 756 ++ S + F +YS + +DPA + P C+G +S I D C E NNNPACGYDGGDCC+C+ S CLDPSAG Y+C P P C+ + + W+V++ A ALA AV+CSGG+F+V+W G V ++ I VGAGT+L ITG DS A I GN+ RLFTVV+A+L + N+ ++ G++ GGAIAA+ S + L T FI+N A GGA+++ Sbjct: 191 LSIDSACGFDGFADYSG-FDCLDPAFFDPTVVAEFPECTGSWSMIGDGQCQEENNNPACGYDGGDCCICSCSGTLCGGLADCLDPSAGDEFYECSPPSPEALPCSAEVQQTWVVDEQEEAHALAAAVNCSGGSFEVEWSGTVVMEMPIVVGAGTVLTITGAGSSTVGDDDSGAVIHGNEGTRLFTVVDAALYLSNITIAFGSSTVGGAIAAAGSTLTLVETMFIANTATDHGGAIYL 426
BLAST of mRNA_H-paniculata_contig10262.176.1 vs. uniprot
Match: D7G2X5_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X5_ECTSI) HSP 1 Score: 189 bits (481), Expect = 1.300e-49 Identity = 91/204 (44.61%), Postives = 132/204 (64.71%), Query Frame = 1 Query: 166 ALYPNCSGIFSWINDSICDERNNNPACGYDGGDCCVCTASH-QFLPARVTCLDPSAGQALYDCREPPPITASCANDTVEEWIVEDTASATALAEAVDCSGGAFQVKWRGIVAIDRTIYVGAGTILNITGLDSMACIDGNDTHRLFTVVNASLNIDNLKLSRGNAAAGGAIAASTSRVALHNTSFISNVAYSEGGALFIIDTSTV 774 A +P+C+G + + D C + NNN CGYDGGDCCVC+ + CLDPSA + L+DC P + C D + W+VE + A ALA AV+CSGG F+V+WRG V + + YV GT+L I+G DS A ++GN + R+FTVVNA L + ++ +S G++ GGAIAA+ S + L+ T+F+ N A + GGA+++ D S+V Sbjct: 61 AEFPDCTGDYLTVGDGSCSKANNNDLCGYDGGDCCVCSCQGVNCMRTSFECLDPSANEELHDCEPSPQLALPCTADAQQTWVVESSTQAQALAAAVNCSGGLFEVEWRGRVVVGQPFYVVDGTVLTISGADSSAVVEGNASTRIFTVVNADLYLSHVNVSYGSSTTGGAIAAARSSLTLNGTNFVGNTASAYGGAIYVSDGSSV 264
BLAST of mRNA_H-paniculata_contig10262.176.1 vs. uniprot
Match: D7FHG7_ECTSI (LNR domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHG7_ECTSI) HSP 1 Score: 180 bits (456), Expect = 3.030e-46 Identity = 109/237 (45.99%), Postives = 149/237 (62.87%), Query Frame = 1 Query: 88 VVVATQSISSYSSFWNYSSTYSSVDPALYPNCSGIFSWINDSICDERNNNPACGYDGGDCCVCTASHQFLPARV---TCLDPSAGQALYDCREPPPITASCANDTVEEWIVEDTASATALAEAVDCSGGAFQVKWRGIVAIDRTIYVGAGTILNITGL-DSMACIDGNDTHRLFTVVNASLNIDNLKLSRGNAAAGGAIAASTSRVALHNTSFISNVAYSEGGALFIIDTSTVSGGG 786 + V + S ++ S N+SST S +C G++ + D CD NNN C +DGGDCC CT + +CLDPSA LYDC E P T C+ + E W+VED+A A ALA V+CSGG+FQV+WRG V++D I++ GT LN+TG ++ A IDGN T RLF+V NA+L + ++L G +A GGAIAAS + +A HNTSF++N A + GGAL++ D+S GGG Sbjct: 1951 IFVCSSSAAAQSK--NHSSTTS--------DCIGVY--VTDGWCDLENNNAECNWDGGDCCECTCVDSQYECGIQGFSCLDPSATD-LYDCGETPAATP-CSAEAQEAWVVEDSAQAQALAANVNCSGGSFQVEWRGSVSLDAPIFIVHGTDLNVTGGGEASAVIDGNGTTRLFSVDNATLRLRGVELRSGFSAIGGAIAASGATLAFHNTSFVNNSAGTNGGALWLTDSSVSWGGG 2173
BLAST of mRNA_H-paniculata_contig10262.176.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 176 bits (445), Expect = 7.940e-45 Identity = 97/210 (46.19%), Postives = 130/210 (61.90%), Query Frame = 1 Query: 160 DPAL---YPNCSGIFSWINDSICDERNNNPACGYDGGDCCVCTASHQFLPARVTCLDPSAGQALYDCREPPPITASCANDTVEEWIVEDTASATALAEAVDCSGGAFQVKWRGIVAIDRTIYVGAGTILNITGL-DSMACIDGNDTHRLFTVVNASLNIDNLKLSRGNAAAGGAIAASTSRVALHNTSFISNVAYSEGGALFIIDTSTVS 777 DPAL +P+C+G + I D C+ NN +CGYDGGD + C+DPSA + LY+C PP T C D+ W+V D+ A ALA AV+CSGG+F+V+W G V ++ TI+V GT+L ITG S A +DGN RLFTVVNA+L++ + LS G + +GGAIAA S + + T+FI NVA GGA+F+ D S VS Sbjct: 152 DPALVAEFPDCTGDWFKIGDGACNPENNIASCGYDGGD-----------GGELDCVDPSAPEELYECEAPPITTTPCPADSEWNWVVGDSEQALALALAVNCSGGSFEVEWVGTVVVNETIFVTDGTVLTITGAAGSNAALDGNSVTRLFTVVNAALHVSGINLSHGASISGGAIAAGGSTLTFNQTNFIGNVASGNGGAVFVSDGSLVS 350
BLAST of mRNA_H-paniculata_contig10262.176.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 171 bits (433), Expect = 3.010e-43 Identity = 91/208 (43.75%), Postives = 127/208 (61.06%), Query Frame = 1 Query: 202 INDSICDERNNNPACGYDGGD----------CCVCTASHQFLPA-RVTCLDPSAGQALYDCREPPPITASCANDTVEEWIVEDTASATALAEAVDCSGGAFQVKWRGIVAIDRTIYVGAGTILNITGLDSMACIDGNDTHRLFTVVNASLNIDNLKLSRGNAAAGGAIAASTSRVALHNTSFISNVAYSEGGALFIIDTSTV--SGGG 786 I + +C+E NNN C YDGGD CC CT S + CLDP A Y+C PP C+ + + W+V+D+A A ALA AV+CSGG+F+V+WRG V ++ YV GT L+ITG S A IDGN RLFTVVNA+L++ + ++ G + GGAIAA+ + + L+ T+F+ N A GGA+++ D S++ SGGG Sbjct: 74 IGNGLCEEGNNNVFCSYDGGDVSLVACSSLLCCYCTCSGALCQSVTFDCLDPDADDEFYECEAAPPTALPCSAEVQQTWVVDDSAQAQALASAVNCSGGSFEVEWRGTVVVESVFYVVDGTTLSITGDGSSAAIDGNAATRLFTVVNATLHLTGVDVTSGASTTGGAIAAAGATLTLNQTNFLRNTATGNGGAIYLSDGSSMVCSGGG 281
BLAST of mRNA_H-paniculata_contig10262.176.1 vs. uniprot
Match: D7G5Y7_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Y7_ECTSI) HSP 1 Score: 170 bits (430), Expect = 7.990e-43 Identity = 95/215 (44.19%), Postives = 131/215 (60.93%), Query Frame = 1 Query: 160 DPAL---YPNCSGIFSWINDSICDERNNNPACGYDGGDCCVCTASHQFLP-ARVTCLDPSAGQALYDCREPPPITASCANDTVEEWIVEDTASATALAEAVDCSGGAFQVKWRGIVAIDRTIYVGAGTILNITGLDSMACIDGNDTHRLFTVVNASLNIDNLKLSRGNAAAGGAIAASTSRVALHNTSFISNVAYSEGGALFIIDTSTVS--GGG 786 DPAL +P+C + + D CD N +CG+DGGDCCVC+ + + C DP+A + ++C+ PPP T C+ + W+VE A LA AV+CSG F+V+WRG VAI IY+G GT+L ITG + + IDGN RLFTV NA L++ NL +S G + GGAIAA+ S + + T+F+ N A GG +++ID S VS GGG Sbjct: 204 DPALVAEFPDCDAGWLGLGDGFCDSELNTASCGWDGGDCCVCSCNGTACSISDFDCFDPNADE-FFECQAPPPATLPCSVEVQLTWLVETPLQAQTLAAAVNCSGS-FEVEWRGRVAIVDPIYIGGGTVLTITGDGASSVIDGNTLTRLFTVNNAVLHLSNLNISNGASIVGGAIAAANSSLTFNGTNFVGNQATRYGGGVYVIDGSDVSCVGGG 416
BLAST of mRNA_H-paniculata_contig10262.176.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 155 bits (392), Expect = 6.890e-38 Identity = 88/178 (49.44%), Postives = 120/178 (67.42%), Query Frame = 1 Query: 265 CCVCTASHQFLPARV---TCLDPSAGQALYDCREPPPITASCANDTVEEWIVEDTASATALAEAVDCSGGAFQVKWRGIVAIDRTIYVGAGTILNITGL-DSMACIDGNDTHRLFTVVNASLNIDNLKLSRGNAAAGGAIAASTSRVALHNTSFISNVAYSEGGALFIIDTSTVSGGG 786 CC CT + +CLDPSA LYDC EPP T C+ + + W+VED+A A ALA V+CSGG+FQV+WRG V++D I++ GT LN+TG ++ A IDGN T RLF+V NA+L + ++L G++A GGAIAAS + +A +NTSF++N A S GGAL++ D+S GGG Sbjct: 85 CCECTCVDSLFSCGIAGFSCLDPSATD-LYDCEEPPAATP-CSAEAQQAWVVEDSAQAQALAANVNCSGGSFQVEWRGSVSLDAPIFIVHGTDLNVTGGGEASAVIDGNGTTRLFSVDNATLRLSGVELRSGSSAIGGAIAASGATLAFNNTSFVNNSAGSNGGALWLTDSSVSWGGG 260
BLAST of mRNA_H-paniculata_contig10262.176.1 vs. uniprot
Match: D7FTL7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTL7_ECTSI) HSP 1 Score: 152 bits (385), Expect = 6.120e-37 Identity = 83/174 (47.70%), Postives = 116/174 (66.67%), Query Frame = 1 Query: 277 TASH-QFLPARVTCLDPSAGQALYDCREPPPITASCANDTVEEWIVEDTASATALAEAVDCSGGAFQVKWRGIVAIDRTIYVGAGTILNITGLDSMACIDGNDTHRLFTVVNASLNIDNLKLSRG-NAAAGGAIAASTSRVALHNTSFISNVAYSEGGALFIIDTSTVSGGGET 792 T SH + CLDP + Y+C+EPPP T C+ + + W+V D+A A ALA AV+CSGG+F+V+WRG V ++ IYV GTI+ +TG+ S A IDG+ RLFTVV+ASL++ N+ +S G + A GG IAA+ SRV L++TS + N A GGA++ + STVS G+T Sbjct: 4 TCSHADCYSSLFDCLDPGSSNGFYECQEPPPATLPCSAEVQQSWVVADSAEALALAAAVNCSGGSFEVEWRGSVVVESPIYVRDGTIVTVTGVGSTAVIDGHAATRLFTVVDASLHLRNVNISYGASRAVGGGIAAAGSRVTLNHTSIVGNRATGHGGAVYASNGSTVSCLGDT 177
BLAST of mRNA_H-paniculata_contig10262.176.1 vs. uniprot
Match: D7FV90_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FV90_ECTSI) HSP 1 Score: 142 bits (359), Expect = 1.650e-33 Identity = 77/189 (40.74%), Postives = 109/189 (57.67%), Query Frame = 1 Query: 172 YPNCSGIFSWINDSICDERNNNPACGYDGGDCCVCTA--SHQFLPARVTCLDPSAGQALYDCREPPPITASCANDTVEEWIVEDTASATALAEAVDCSGGAFQVKWRGIVAIDRTIYVGAGTILNITGLD---SMACIDGNDTHRLFTVVNASLNIDNLKLSRGNAAAGGAIAASTSRVALHNTSFISN 723 + NC+G + + +C NN P C YDGGDCC C+ + R CLDPS ++ E T +C+ D EW+VEDTA A LA A++C+GG F V+WRG V + +T++V GT +NITG+D S A DGN R+F V+N+SLN+ + LS G+ GGAI ++ V +S + N Sbjct: 152 FENCTGYPPSMGNGLCIPENNIPECEYDGGDCCECSCQPAQYMCLGRFDCLDPS-----FNTTECVTNTTACSPDLSREWLVEDTADAIELANAINCTGGTFDVEWRGSVIVPQTLWVSQGTTVNITGVDTTASPAVADGNGESRIFGVINSSLNLHGMTLSNGHGVVGGAIFSALGTVTFSGSSALVN 335 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10262.176.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10262.176.1 >prot_H-paniculata_contig10262.176.1 ID=prot_H-paniculata_contig10262.176.1|Name=mRNA_H-paniculata_contig10262.176.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=378bp GYSGAAEATGTMTWRGGVVLKRFVFVTCWVVVATQSISSYSSFWNYSSTYback to top mRNA from alignment at H-paniculata_contig10262:4441..5576+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10262.176.1 ID=mRNA_H-paniculata_contig10262.176.1|Name=mRNA_H-paniculata_contig10262.176.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1136bp|location=Sequence derived from alignment at H-paniculata_contig10262:4441..5576+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10262:4441..5576+ >mRNA_H-paniculata_contig10262.176.1 ID=mRNA_H-paniculata_contig10262.176.1|Name=mRNA_H-paniculata_contig10262.176.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2268bp|location=Sequence derived from alignment at H-paniculata_contig10262:4441..5576+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |