mRNA_H-paniculata_contig10251.172.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig10251.172.1 vs. uniprot
Match: D8LD30_ECTSI (Protein-serine/threonine phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD30_ECTSI) HSP 1 Score: 258 bits (659), Expect = 4.190e-72 Identity = 230/568 (40.49%), Postives = 263/568 (46.30%), Query Frame = 1 Query: 1 KSLERIFPCGLDMALIVDDRDDVWRGAQANNLLLVRPYKFFVGQRSVPDGPTHGGAPQAPIKLPLRELSRDRSXXXXXXXXXXXXXXXXXSNQDGPRQRRSDNQSPKEVKQEGAHSGDVSKNTGAPTVQEEGSET---------------DELLQRPAGMLKSSKANADPHAPVQGDGGTAMDTETSVSGVVSEKGDGSVLSPDVVGKLGEGLAALLAKQREQVQGKNDALAGTGMIRSASDAVAAGDTXXXXXXXXXXXXXXXXXXXXKATSLVNTGDRRKELPAQEQVAGDAIKSIPKKSKRTDEPAQIAPLHSVCTPTTGETAETVEMSVETNSCDITAAAAVTAGEDRASSSSLPNLKAAADSRLASWRRKDSTGTKDGGVKGEATSVEGLSPMSPPRAAVPRSPKHATLTAPVENDPQLDCTLKTLEAVHGAFYSPEHCQHGQSRYDVARFLAKVRSRVLRGVRMVFSGVIPVSGMHADPRTHKLWRMAEAHGATVDGAIDRYTTHVVAVRLGTAKTTKGLRMPGVCVVHLDWLMNSVWHCRRERETIFLLAGVSYCHNPLPL 1659 KSLERIFP GLDMALIVDDRDDVWRG QA NLLLVRPYKFFVGQRSVP GPTH P R RS SP + +G P V E+G ++L R G + + +A P +G + + SV V + G SP G+ + + + + + QG+ L XXXXXXXXXXXXXXXXX + SL R E QE AG +R S A DS L D G K+ + +A G+ A ENDPQLDCT KTLEAVHGAFY+PE+ HGQ R A FLAKVR RVL GVRMVFSGVIPVSG ADPRTH+LW MAE+HGATV+ I R+TTHVVAVRLGTAKT GLRMPGV VVHLDWLMNSVWHCRRERET+FLLAG +P PL Sbjct: 366 KSLERIFPNGLDMALIVDDRDDVWRGEQAKNLLLVRPYKFFVGQRSVPGGPTHDAGPHPXXXXXXXXXXXXFRE----------------------RLERSAEHSPLPG----------TTKSGRPGVGEDGXXXXXXXXXXXXXXXXXXEKLGDRDKGAMTTGQARK----PSRGXXXXXXNGKKSVVKVRHDGAGGGRASPAERGEDEDSVVEINGVEVGRQQGEQQQL--EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDKQVASLGEGLARMLENKRQEXXXXXXXXXXXXXXXXXXH----------------------------------------AGGNRPSVPGTKKPTVAGDSTL------DEDG-KEKEKEEDAADAVGV-------------------VASAENDPQLDCTFKTLEAVHGAFYAPENSNHGQPRA-AAGFLAKVRLRVLTGVRMVFSGVIPVSGAPADPRTHRLWMMAESHGATVERDIGRHTTHVVAVRLGTAKTKTGLRMPGVFVVHLDWLMNSVWHCRRERETMFLLAGQICGGDPPPL 828
BLAST of mRNA_H-paniculata_contig10251.172.1 vs. uniprot
Match: A0A836CNJ6_9STRA (Protein-serine/threonine phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNJ6_9STRA) HSP 1 Score: 139 bits (351), Expect = 4.650e-32 Identity = 73/140 (52.14%), Postives = 88/140 (62.86%), Query Frame = 1 Query: 1207 VENDPQLDCTLKTLEAVHGAFYSPEHCQHGQSRYDVARFLAKVRSRVLRGVRMVFSGVIPVSGMHADPRTHKLWRMAEAHGATVDGAIDRYTTHVVAVRLGTAKTTKGLRMPGVCVVHLDWLMNSVWHCRRERETIFLLA 1626 VENDPQL CTL L AVH FY+ + D + LA+VR VLRG R+VF+G+IP + P TH LWR A A GA VD + TTHVVA ++G+ KT GLR G VVH+DW+M WHCRRE E +FLLA Sbjct: 279 VENDPQLLCTLAVLTAVHDKFYASNGST--PAHRDASALLAEVRRAVLRGARLVFTGLIP---LQTPPHTHALWRYATALGAAVDADVTPATTHVVAAQMGSEKTVAGLRTRGCVVVHVDWVMFCFWHCRREDERMFLLA 413
BLAST of mRNA_H-paniculata_contig10251.172.1 vs. uniprot
Match: A0A507E3Q5_9FUNG (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E3Q5_9FUNG) HSP 1 Score: 91.3 bits (225), Expect = 1.320e-15 Identity = 63/174 (36.21%), Postives = 90/174 (51.72%), Query Frame = 1 Query: 1123 TSVEGLSPMSPPRAAVPRSPKHATLTAPVENDPQLDCTLKTLEAVHGAFYSPEHCQHGQSRYDVARFLAKVRSRVLRGVRMVFSGVIPVSGMHADPRTHKLWRMAEAHGATVDGAIDRYTTHVVAVR-LGTAKTTKGLR---MPGVCVVHLDWLMNSVWHCRRERETIFLLAGV 1632 ++ + + P +P + PR T V+ND +LD + L VH FY+ E G + DV +A+ + VLRGV++VFSGVIP + +P +W AE GA + THVV V+ +GT +T K R MPGV VV DWL +S+ R+ E +LL V Sbjct: 407 SATDNVKPKTPTKELSPRR-----RTVLVDNDRELDRVTEILRNVHHTFYA-EKAASGPAPPDVGEIMARQKKDVLRGVKIVFSGVIP---SNLNPAQQDIWIGAEQFGAKCSVDLSDDVTHVVTVKQIGTNRTNKVRRARNMPGVFVVKPDWLYDSISRWERQEEEEYLLEEV 571
BLAST of mRNA_H-paniculata_contig10251.172.1 vs. uniprot
Match: A0A131YVW9_RHIAP (RNA polymerase II subunit A C-terminal domain phosphatase n=3 Tax=Ixodidae TaxID=6939 RepID=A0A131YVW9_RHIAP) HSP 1 Score: 87.4 bits (215), Expect = 9.470e-15 Identity = 50/130 (38.46%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 1225 LDCTLKTLEAVHGAFYSPEHCQHGQSRYDVARFLAKVRSRVLRGVRMVFSGVIPVSGMHADPRTHKLWRMAEAHGATVDGAIDRYTTHVVAVRLGTAKTTKGLRMPGVCVVHLDWLMNSVWHCRRERETI 1614 L+ L+T+ + A Y + G D+ + VR +VL+GV +VFSGV+P M+ + W++A++ GATV + TH+VA RLGTAK K RMPGV VVH WL W C E + Sbjct: 48 LEEILRTIHCAYYAIYDQMTSEEGGRIPDLKHVVPYVRRKVLKGVHIVFSGVVP---MNQPAEKSRAWQVAKSLGATVSRDLGPGVTHLVAARLGTAKVNKARRMPGVHVVHPSWL----WCCAERWEHV 170
BLAST of mRNA_H-paniculata_contig10251.172.1 vs. uniprot
Match: A0A224Z748_9ACAR (RNA polymerase II subunit A C-terminal domain phosphatase n=2 Tax=Rhipicephalus TaxID=426455 RepID=A0A224Z748_9ACAR) HSP 1 Score: 87.4 bits (215), Expect = 2.810e-14 Identity = 50/130 (38.46%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 1225 LDCTLKTLEAVHGAFYSPEHCQHGQSRYDVARFLAKVRSRVLRGVRMVFSGVIPVSGMHADPRTHKLWRMAEAHGATVDGAIDRYTTHVVAVRLGTAKTTKGLRMPGVCVVHLDWLMNSVWHCRRERETI 1614 L+ L+T+ + A Y + G D+ + VR +VL+GV +VFSGV+P M+ + W++A++ GATV + TH+VA RLGTAK K RMPGV VVH WL W C E + Sbjct: 597 LEEILRTIHCAYYAIYDQMTSEEGGRIPDLKHVVPYVRRKVLKGVHIVFSGVVP---MNQPAEKSRAWQVAKSLGATVSRDLGPGVTHLVAARLGTAKVNKARRMPGVHVVHPSWL----WCCAERWEHV 719
BLAST of mRNA_H-paniculata_contig10251.172.1 vs. uniprot
Match: A0A224Z889_9ACAR (RNA polymerase II subunit A C-terminal domain phosphatase n=1 Tax=Rhipicephalus zambeziensis TaxID=60191 RepID=A0A224Z889_9ACAR) HSP 1 Score: 86.7 bits (213), Expect = 3.940e-14 Identity = 50/130 (38.46%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 1225 LDCTLKTLEAVHGAFYSPEHCQHGQSRYDVARFLAKVRSRVLRGVRMVFSGVIPVSGMHADPRTHKLWRMAEAHGATVDGAIDRYTTHVVAVRLGTAKTTKGLRMPGVCVVHLDWLMNSVWHCRRERETI 1614 L+ L+T+ + A Y + G D+ + VR +VL+GV +VFSGV+P M+ + W++A++ GATV + TH+VA RLGTAK K RMPGV VVH WL W C E + Sbjct: 328 LEEILRTIHCAYYAIYDQMTSEEGGRIPDLKHVVPYVRRKVLKGVHIVFSGVVP---MNQPAEKSRAWQVAKSLGATVSRDLCPGVTHLVAARLGTAKVNKARRMPGVHVVHPSWL----WCCAERWEHV 450
BLAST of mRNA_H-paniculata_contig10251.172.1 vs. uniprot
Match: UPI0018936978 (RNA polymerase II subunit A C-terminal domain phosphatase-like isoform X2 n=1 Tax=Rhipicephalus sanguineus TaxID=34632 RepID=UPI0018936978) HSP 1 Score: 86.7 bits (213), Expect = 4.510e-14 Identity = 50/130 (38.46%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 1225 LDCTLKTLEAVHGAFYSPEHCQHGQSRYDVARFLAKVRSRVLRGVRMVFSGVIPVSGMHADPRTHKLWRMAEAHGATVDGAIDRYTTHVVAVRLGTAKTTKGLRMPGVCVVHLDWLMNSVWHCRRERETI 1614 L+ L+T+ + A Y + G D+ + VR +VL+GV +VFSGV+P M+ + W++A++ GATV + TH+VA RLGTAK K RMPGV VVH WL W C E + Sbjct: 597 LEEILRTIHCAYYAIYDQMTSEEGGRIPDLKHVVPYVRRKVLKGVHIVFSGVVP---MNQPAEKSRAWQVAKSLGATVSRDLCPGVTHLVAARLGTAKVNKARRMPGVHVVHPSWL----WCCAERWEHV 719
BLAST of mRNA_H-paniculata_contig10251.172.1 vs. uniprot
Match: UPI001899FCAB (RNA polymerase II subunit A C-terminal domain phosphatase-like n=1 Tax=Dermacentor silvarum TaxID=543639 RepID=UPI001899FCAB) HSP 1 Score: 86.7 bits (213), Expect = 4.910e-14 Identity = 50/130 (38.46%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 1225 LDCTLKTLEAVHGAFYSPEHCQHGQSRYDVARFLAKVRSRVLRGVRMVFSGVIPVSGMHADPRTHKLWRMAEAHGATVDGAIDRYTTHVVAVRLGTAKTTKGLRMPGVCVVHLDWLMNSVWHCRRERETI 1614 L+ L+T+ + A Y + G D+ + VR +VL+GV +VFSGV+P M+ + W++A++ GATV + TH+VA RLGTAK K RMPGV VVH WL W C E + Sbjct: 596 LEEILRTIHCAYYAIYDQMTTEEGGRIPDLKHVVPYVRRKVLKGVNIVFSGVVP---MNQPAEKSRAWQVAKSLGATVSLDLGPGVTHLVAARLGTAKVNKARRMPGVHVVHPSWL----WCCAERWEHV 718
BLAST of mRNA_H-paniculata_contig10251.172.1 vs. uniprot
Match: A0A7S1GHM8_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GHM8_CYCTE) HSP 1 Score: 80.1 bits (196), Expect = 1.760e-13 Identity = 51/136 (37.50%), Postives = 70/136 (51.47%), Query Frame = 1 Query: 1222 QLDCTLKTLEAVHGAFYSPEHCQHGQSRYDVARFLAKVRSRVLRGVRMVFSGVIPVSGMHADPRT-HKLWRMAEAHGATVDGAIDRYTTHVVAVRLGTAKTTKGLRMPGVCVVHLDWLMNSVWHCRRERETIFLLA 1626 QL T LE VH Y+ E + V + L ++RS +LRG R+V SG+IP+ R H + R + GA + ++ TTH+VA R GT K + R+PG VV WLM SVW +R+ E LL Sbjct: 12 QLVWTKNILERVHRRIYADEESM----KKTVPQHLQEMRSDILRGTRLVLSGLIPLHRQSKTDRPRHHVIRHVQNLGAELMESVGSSTTHLVAARDGTDKILQARRIPGCFVVKPSWLMESVWSLQRQDEMKHLLG 143
BLAST of mRNA_H-paniculata_contig10251.172.1 vs. uniprot
Match: UPI0018894916 (RNA polymerase II subunit A C-terminal domain phosphatase-like n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=UPI0018894916) HSP 1 Score: 84.3 bits (207), Expect = 2.620e-13 Identity = 49/130 (37.69%), Postives = 69/130 (53.08%), Query Frame = 1 Query: 1225 LDCTLKTLEAVHGAFYSPEHCQHGQSRYDVARFLAKVRSRVLRGVRMVFSGVIPVSGMHADPRTHKLWRMAEAHGATVDGAIDRYTTHVVAVRLGTAKTTKGLRMPGVCVVHLDWLMNSVWHCRRERETI 1614 L+ L+T+ + A Y + G D+ + VR +VL+GV +VFSGV+P M+ + W++A++ GATV + TH+VA RLGTAK K R PGV VVH WL W C E + Sbjct: 598 LEEILRTIHCAYYAIYDQMTSEEGGRIPDLKHVVPYVRRKVLKGVHIVFSGVVP---MNQPAEKSRAWQVAKSLGATVSQDLCPGVTHLVAARLGTAKVNKARRTPGVHVVHPSWL----WCCAERWEHV 720 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10251.172.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig10251.172.1 >prot_H-paniculata_contig10251.172.1 ID=prot_H-paniculata_contig10251.172.1|Name=mRNA_H-paniculata_contig10251.172.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=554bp KSLERIFPCGLDMALIVDDRDDVWRGAQANNLLLVRPYKFFVGQRSVPDGback to top mRNA from alignment at H-paniculata_contig10251:833..6179+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig10251.172.1 ID=mRNA_H-paniculata_contig10251.172.1|Name=mRNA_H-paniculata_contig10251.172.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5347bp|location=Sequence derived from alignment at H-paniculata_contig10251:833..6179+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig10251:833..6179+ >mRNA_H-paniculata_contig10251.172.1 ID=mRNA_H-paniculata_contig10251.172.1|Name=mRNA_H-paniculata_contig10251.172.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3324bp|location=Sequence derived from alignment at H-paniculata_contig10251:833..6179+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |