mRNA_H-paniculata_contig1024.167.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1024.167.1 vs. uniprot
Match: D8LKA2_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKA2_ECTSI) HSP 1 Score: 330 bits (846), Expect = 2.020e-103 Identity = 256/544 (47.06%), Postives = 292/544 (53.68%), Query Frame = 3 Query: 30 MAWGVRRGVDDLVQKLVENKTAKTMCILGQRNFGASEAAALAAALATNTSLRELMASGHPLRPEEASAFGRSLSRNKTLQSLCLGDNHFGDEGVLALVEGGLKSNVGLLVLDLEYKSIVTGAAVLPLLRAHPTLVDLRLGRNRLAEPGTTTIALGLSRNSTLTRLDLSGNLLNASAVEALGRALFPCPALPATTXXXXXXXALGTDKAEKCTTDSIEDHKKSVVTPGEPASSFPPLEFLDLSRNPLGDEGGAALFRAVTASXXXXXXXXXXXXXXXXXXXXXPSVSHYSYPLRSLSLAETGVGPQTAAALAEALVYTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---NGLMLLKTLDLSKNELGTVGAGKLAVALRRGGAPRLESLSLGYNGVGDDGATAIGRGAGGGLRMLDFSGNGLSGLGLAGVLSASGLKEAKLFHNGCGDKGVSLVLEAVLGGAHIETLDLGANGLTGAGFEALLPRLSDCXXXXXXXXXXNSNDDRAEAAVRQSQANNPSLDIAFRRGGEAMEGSGAPPGV 1652 MAWG RGVDDL+ KL +N TA TMCIL R FG SEAAA +AAL+ NTSL EL+ASGHPL + GLLVLDLEYKSI +G + LL HPTL DLRLGRN+L E G +++ GLS NSTL RLD+SGN LNA+A EALGRAL C PA A+G T ++ LEFLD+SRNPLGDEGGAALFRA+ S L L LAE +GP AAALAEALV A+ XXXXXXXX GL L+ LD+SKNELGT G ++A AL RGGAPRLE+LS+ YN VGDDGA A L+EAKLFHN C D+GV LVLEA+L G ++TLDLGANGL XXXXXXXXXX SND+RAE AVR+SQ +NP+LDIAFRRGGEAMEGSGAPPGV Sbjct: 1 MAWGAPRGVDDLIAKLNDNSTASTMCILSTRKFGPSEAAAFSAALSGNTSLTELLASGHPLEVAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH-GLLVLDLEYKSIASGEGLRTLLETHPTLADLRLGRNQLGEAGMKSLSAGLSLNSTLLRLDVSGNQLNAAAAEALGRAL--CTHRPA---------AIGNQTG----TSAVGGSDXXXXXXXXXXXXXXXLEFLDVSRNPLGDEGGAALFRALATSPT----------------------------LTGLVLAEAKLGPLAAAALAEALVPPPASPLPGGGGPSGPAEPDSGEMTPLPXXXXXXXXXNGGGLQKLQALDVSKNELGTGGGAEVAGALSRGGAPRLETLSMAYNDVGDDGAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLREAKLFHNACKDEGVPLVLEALLAGGTLQTLDLGANGLXXXXXXXXXXXXXXXXXXXXXXXXXXSNDERAEEAVRRSQGSNPALDIAFRRGGEAMEGSGAPPGV 500
BLAST of mRNA_H-paniculata_contig1024.167.1 vs. uniprot
Match: H3GES3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GES3_PHYRM) HSP 1 Score: 106 bits (264), Expect = 6.080e-21 Identity = 68/163 (41.72%), Postives = 97/163 (59.51%), Query Frame = 3 Query: 30 MAWGVRRGVDDLVQKLVENKTAKTMCILGQRNFGASEAAALAAALATNTSLRELMASGHPLRPEEASAFGRSLSRNKTLQSLCLGDNHFGDEGVLALVEGGLKSNVGLLV-LDLEYKSI-VTGAAVLP-LLRAHPTLVDLRLGRNRLAEPGTTTIALGLSRNS 509 MAWG + GVDDL+QKL++ KTAK++ ++ R+ S+ LA+AL +N L EL SGH L P+ AF L+ N T++ L LG GDE V L G ++ L DLE+KS+ V GAA L LL+ + +L L L RN++ + G +A GL+ N+ Sbjct: 1 MAWGRKAGVDDLLQKLLQPKTAKSLYVMSTRSITDSDVVQLASALRSNELLEELYLSGHELGPQGLQAFAECLAINSTMKHLSLGSEKLGDEAVKVLSAGLARNKQSALQNWDLEFKSLTVDGAAALAELLKTNTSLTTLTLSRNQIGDEGVQKLADGLAGNA 163
BLAST of mRNA_H-paniculata_contig1024.167.1 vs. uniprot
Match: A0A7S2SI57_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SI57_9STRA) HSP 1 Score: 105 bits (263), Expect = 8.020e-21 Identity = 69/186 (37.10%), Postives = 100/186 (53.76%), Query Frame = 3 Query: 30 MAWGVRRGVDDLVQKLVENKTAKTMCILGQRNFGASEAAALAAALATNTSLRELMASGHPLRPEEASAFGRSLSRNKTLQSLCLGDNHFGDEGVLALVEGGLKSNVGLLVLDLEYKSIVTGA--AVLPLLRAHPTLVDLRLGRNRLAEPGTTTIALGLSRNSTLTRLDLSGNLLNASAVEALGRAL 581 M WG ++GVDDLVQKL N+T +TM IL R+FG E A ALATNTSL+EL+ SGH LG+++FGD+GV AL N L ++LEYKS+ GA A+ L+ L + LGRN L + ++ G+ + ++ + L N+L+A+ + +G +L Sbjct: 1 MVWGKKQGVDDLVQKLSRNETGETMLILSNRSFGDKETIAFCKALATNTSLKELLCSGHXXXXXXXXXXXXXXXXXXXXXXXGLGNSNFGDKGVAALFANW--ENSTLTHIELEYKSLGQGAMEAISSALQRENALESILLGRNGLNDTHVEVLSKGIQASPSINHICLKSNVLSATGCKHVGDSL 184
BLAST of mRNA_H-paniculata_contig1024.167.1 vs. uniprot
Match: A0A5D6XRZ3_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XRZ3_9STRA) HSP 1 Score: 103 bits (256), Expect = 6.380e-20 Identity = 66/162 (40.74%), Postives = 94/162 (58.02%), Query Frame = 3 Query: 30 MAWGVRRGVDDLVQKLVENKTAKTMCILGQRNFGASEAAALAAALATNTSLRELMASGHPLRPEEASAFGRSLSRNKTLQSLCLGDNHFGDEGVLALVEGGLKS-NVGLLVLDLEYKSIV-TGAAVL-PLLRAHPTLVDLRLGRNRLAEPGTTTIALGLSRN 506 MAWG R GV DL+ +L + TAK++ +L R ++A LAA+++ NT+L EL SGH L AF ++ N+ LQ LC+GD+ FGD GV A+ + ++ L DLE+KS+ TGA+ L LL + TL L L RN L++ G + GL N Sbjct: 1 MAWGQRVGVQDLLDRLQQPATAKSLFVLSTRKLSDADAERLAASISANTTLEELYLSGHRLSATALRAFADCVAANRALQLLCIGDDAFGDAGVHAVCDALARNPQSALQAWDLEHKSVTATGASTLGQLLATNSTLTTLTLSRNALSDDGIRALLDGLREN 162
BLAST of mRNA_H-paniculata_contig1024.167.1 vs. uniprot
Match: A0A0N7L3P0_PLAHL (LRR-containing protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L3P0_PLAHL) HSP 1 Score: 99.4 bits (246), Expect = 1.170e-18 Identity = 66/164 (40.24%), Postives = 93/164 (56.71%), Query Frame = 3 Query: 30 MAWGVRRGVDDLVQKLVENKTAKTMCILGQRNFGASEAAALAAALATNTSLRELMASGHPLRPEEASAFGRSLSRNKTLQSLCLGDNHFGDEGVLALVEGGLKSNV--GLLVLDLEYKSI-VTGAAVLP-LLRAHPTLVDLRLGRNRLAEPGTTTIALGLSRNS 509 MAWG GVDDL+QKL KT+K++ ++ R S+ LA +++ NT L EL SGH L P+ AF LS N TL+ L LG + D+ V AL GL N + DLE+KS+ V GAA + LL + +L + L RN++ + G +A GL +N+ Sbjct: 1 MAWGTNAGVDDLLQKLANPKTSKSLYVMRSRAISDSDMVQLATSISKNTVLEELYISGHHLGPQGLQAFVNCLSVNSTLKHLSLGSENLKDQAVQAL-SAGLARNAHSSIQSWDLEFKSLGVDGAAAIANLLETNQSLAIVALSRNQIGDQGVEKLAKGLRKNA 163
BLAST of mRNA_H-paniculata_contig1024.167.1 vs. uniprot
Match: A0A3F2RXS1_9STRA (Bile salt export pump n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RXS1_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 1.830e-17 Identity = 67/158 (42.41%), Postives = 93/158 (58.86%), Query Frame = 3 Query: 45 RRGVDDLVQKLVENKTAKTMCILGQRNFGASEAAALAAALATNTSLRELMASGHPLRPEEASAFGRSLSRNKTLQSLCLGDNHFGDEGVLALVEGGLKSNV--GLLVLDLEYKSI-VTGA-AVLPLLRAHPTLVDLRLGRNRLAEPGTTTIALGLSRN 506 R GVDDL+QKL + KTAK + ++ R+ ++ LA+ ++TNT L EL SGH L P+ AF L+ N TL+ L LG++ GD V L GL+ NV L V DLEYKS+ V G+ A+ LL + +L L L RN++ + G +A GL N Sbjct: 1292 RAGVDDLLQKLQQPKTAKNLYVMSTRSITDADICRLASTISTNTLLEELYLSGHRLGPDGLQAFAECLAINTTLKHLGLGNDSLGDAAVQTLC-AGLRCNVQSALQVWDLEYKSLGVDGSSAIADLLAVNTSLKTLALSRNQVGDQGVEKLAAGLIAN 1448
BLAST of mRNA_H-paniculata_contig1024.167.1 vs. uniprot
Match: A0A2R5GZM4_9STRA (NACHT, LRR and PYD domains-containing protein 3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GZM4_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 2.170e-17 Identity = 66/148 (44.59%), Postives = 86/148 (58.11%), Query Frame = 3 Query: 30 MAWGV-RRGVDDLVQKLVENKTAKTMCILGQRNFGASEAAALAAALATNTSLRELMASGHPLRPEEASAFGRSLSRNKTLQSLCLGDNHFGDEGVLALVEGGLKSNVGLLVLDLEYKSIVTGAAV-LPLLRAHPT--LVDLRLGRNRL 461 MAWG RRGVDDLV KL N+T + ++ R S ALA ALA N+SL EL+ SGH + + A G++L +N TL+ L +G FGD + AL++ N L LDLE+KS+ G L + A P+ L DLRLGRN L Sbjct: 1 MAWGQQRRGVDDLVAKLRANETGPALLVMSMRKVDESGLCALADALAENSSLEELLCSGHSVSEDAAKRLGQALRQNSTLKRLSVGCAQFGDAELAALLDAW--ENSTLEALDLEFKSLTAGGMPHLGSVLAQPSHALQDLRLGRNDL 146
BLAST of mRNA_H-paniculata_contig1024.167.1 vs. uniprot
Match: G4ZAE9_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZAE9_PHYSP) HSP 1 Score: 93.2 bits (230), Expect = 1.330e-16 Identity = 63/164 (38.41%), Postives = 94/164 (57.32%), Query Frame = 3 Query: 30 MAWGVRRGVDDLVQKLVENKTAKTMCILGQRNFGASEAAALAAALATNTSLRELMASGHPLRPEEASAFGRSLSRNKTLQSLCLGDNHFGDEGVLALVEGGLKSNV--GLLVLDLEYKSI-VTGAAVL-PLLRAHPTLVDLRLGRNRLAEPGTTTIALGLSRNS 509 MAWG + GVDDL+QKL KTAK++ ++ R+ ++ LA++++ N+ L EL SGH + + AF L+ N TL+ L LG GD+ V L GL N L DLE+KS+ V GAA + LL+ + +L + L RN++ + G +A LS N+ Sbjct: 1 MAWGKKAGVDDLLQKLSNPKTAKSLYVMSTRSISDADFGRLASSISGNSQLEELYLSGHKVGAQGLQAFADCLAVNSTLKHLSLGSEALGDDAVKTL-SAGLARNAQSALESWDLEFKSLGVDGAAAVGELLKTNKSLKTVTLSRNQIGDEGVKKLAERLSENA 163
BLAST of mRNA_H-paniculata_contig1024.167.1 vs. uniprot
Match: A0A6A3JI28_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JI28_9STRA) HSP 1 Score: 92.8 bits (229), Expect = 1.770e-16 Identity = 63/164 (38.41%), Postives = 93/164 (56.71%), Query Frame = 3 Query: 30 MAWGVRRGVDDLVQKLVENKTAKTMCILGQRNFGASEAAALAAALATNTSLRELMASGHPLRPEEASAFGRSLSRNKTLQSLCLGDNHFGDEGVLALVEGGLKSNV--GLLVLDLEYKSI-VTGAAVL-PLLRAHPTLVDLRLGRNRLAEPGTTTIALGLSRNS 509 MAWG + GVDDL+QKL KTAK++ ++ R+ + LA+++++N+ L EL SGH + + AF L+ N TL+ L LG GD+ V L GL N L DLE+KS+ V GAA + LLR + +L + L RN++ + G + GL N+ Sbjct: 1 MAWGKKAGVDDLLQKLNNPKTAKSLYVMSTRSISDVDFVRLASSISSNSLLEELYLSGHKVGAQGLQAFADCLAVNSTLRHLSLGSEALGDDAVKTL-SAGLARNAQSALESWDLEFKSLGVDGAAAVGELLRTNKSLKTVTLSRNQVGDEGVKKLVEGLGENA 163
BLAST of mRNA_H-paniculata_contig1024.167.1 vs. uniprot
Match: A0A7S0I9S7_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0I9S7_MICPS) HSP 1 Score: 82.8 bits (203), Expect = 4.380e-14 Identity = 60/187 (32.09%), Postives = 94/187 (50.27%), Query Frame = 3 Query: 30 MAWGVRRGVDDLVQKL-VENKTAKTMCILGQRNFGASEAAALAAALATNTSLRELMASGHPLRPEEASAFGRSLSRNKTLQSLCLGDNHFGDEGVLALVEGGLKSNVGLLVLDLEYKSIVTGAAVLPLLRAHPTLV-DLRLGRN-RLAEPGTTTIALGLSRNSTLTRLDLSGNLLNASAVEALGRAL 581 MAWG GV V +L ++ T ++ + R FG +EAA + AL +NT+LRE ASGH + + A F L+ N+T++S+C+GD FGD+GV AL G + S+ L +D V +L + RN L + G + LG + T+T L ++G + + A+ + L Sbjct: 1 MAWGKTVGVASWVDRLKADDPTLTSVTVFRGRLFGPAEAAEVCDALRSNTALREFYASGHAMDVDTAGKFSDMLAVNETVESICIGDASFGDDGVAALARG-IASSASLRAVDXXXXXXXXXXXXXXXXXXXXXKVTELNVSRNDALTDAGLAAVCLGAAAGRTVTSLRVAGLSVGPKSAAAVSKLL 186 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1024.167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1024.167.1 >prot_H-paniculata_contig1024.167.1 ID=prot_H-paniculata_contig1024.167.1|Name=mRNA_H-paniculata_contig1024.167.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=544bp MAWGVRRGVDDLVQKLVENKTAKTMCILGQRNFGASEAAALAAALATNTSback to top mRNA from alignment at H-paniculata_contig1024:11707..20071- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1024.167.1 ID=mRNA_H-paniculata_contig1024.167.1|Name=mRNA_H-paniculata_contig1024.167.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8365bp|location=Sequence derived from alignment at H-paniculata_contig1024:11707..20071- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1024:11707..20071- >mRNA_H-paniculata_contig1024.167.1 ID=mRNA_H-paniculata_contig1024.167.1|Name=mRNA_H-paniculata_contig1024.167.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3264bp|location=Sequence derived from alignment at H-paniculata_contig1024:11707..20071- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |