mRNA_H-paniculata_contig10195.152.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig10195.152.1
Unique NamemRNA_H-paniculata_contig10195.152.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig10195.152.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE)

HSP 1 Score: 184 bits (468), Expect = 1.050e-49
Identity = 138/352 (39.20%), Postives = 181/352 (51.42%), Query Frame = 1
Query:    1 AVMASKSISPPLVVLDDVWEREVVDVLRPMGFQLFITTHNWPVVEI-----EVGDMMEDVAVELLLKISGTVGQPGEDIQRLTMKVVAVCRQLPLVLAITGSMPVVTGKGLTAGTWEKLHNTFKDKVEKDWIRAGEISQ*SA*GQFRCFVSKAAGRITQGGSIDRR*CCTG--------------RDAASSVGDGRRS*GSCVQVPAASCGW--------WVSCA*PVPRLYLNQDQGRR*DVKNRYSVADAIPS-ESGRHIEGLYSLIALWRLVEDLPGDAQLEAASYCASLGELEEYEGTADSASSFFVVRSLFEVQVGLFVQ--PLYKRSLATREKMYGPDHRYVPSSL 966
            A +AS   SP LVVLDDVWEREVVD L  +G ++ +TT +  VV +     E+GDM E+ A+ELLLK S TVGQPG +++    KVV +C  LPLVLAI GSM VV GKGLTA  WE+L   F++  +K  +R GE S          F + AA +  +  S+       G               DA  +  +       C+       G+        +V  +       + +    +     R  V  +    E G   +GL+ L ALWR VE L GD +LE ASY ASLGELE  E T D ASS+  V  LF +Q G F +  PLY RS A +EK+ GP+H  V +SL
Sbjct:  119 ATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGGLLELGDMTEEEALELLLKTSRTVGQPGHEVRTQMTKVVVLCGHLPLVLAIAGSMSVVKGKGLTAVAWEELIKEFENVAKKMRVR-GEQSSSIKVVLGTSFDALAARKQEE--SLKMTVLAAGALAPIEMLRNLWEIEDAEGTREEAEGLVSKCLLQAVGGSGYRVHDLVLEFVKTSIRAEEEMVEKATALQAQYLGRVDVLKSYGDPEHGAGNQGLFFLDALWRSVEKLSGDPELEVASYRASLGELESCEATEDVASSYRWVGFLFNIQ-GKFTEAEPLYGRSQAIQEKVLGPEHPDVATSL 466          
BLAST of mRNA_H-paniculata_contig10195.152.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 1.550e-48
Identity = 139/353 (39.38%), Postives = 179/353 (50.71%), Query Frame = 1
Query:    1 AVMASKSISPPLVVLDDVWEREVVDVLRPMGFQLFITTHNWPVV-----EIEVGDMMEDVAVELLLKISGTVGQPGEDIQRLTMKVVAVCRQLPLVLAITGSMPVVTGKGLTAGTWEKLHNTFKDKVEKDWIRAGEISQ*SA*-------------GQFRCFVSKAAGRITQGGSIDRR*CCTGRDAASSVGDGRRS*GSCVQVPAASCGWWVSCA*PVPRLYLNQDQGRR*DVKN----------RYSVADAIPS-ESGRHIEGLYSLIALWRLVEDLPGDAQLEAASYCASLGELEEYEGTADSASSFFVVRSLFEVQVGLFVQ--PLYKRSLATREKMYGPDHRYVPSSL 966
            A +AS   SP LVVLDDVWEREVVD   P+GF++ +TT +  VV      +E+GDM E+ A+ELL K SGTVGQPG+D++    KVVA+C  LPLVLAI GSM VV GKGLTA  WE+L    ++  +K   R  + S                   +F      AAG +     +  R      DA  +  D       C+       G+ V     V        +     VK           R  V +     E G   +GL+ L ALWR VE L GD +LE ASY  SLGELE  E T   A S++ V  LF +Q G + +  PLY+RSLA +EK+ GP+H  V +SL
Sbjct:  378 AAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSGTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEML--RNLWEVEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDL--VLEFAKTSIRAEEETVKKATALQAQYLGRLDVLEGYGDPEHGAGGQGLFFLDALWRSVEKLSGDPELEVASYHNSLGELESCEATKAVARSYWSVGFLFNIQ-GKYAEAEPLYERSLAIQEKVLGPEHPDVATSL 725          
BLAST of mRNA_H-paniculata_contig10195.152.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 3.680e-47
Identity = 136/358 (37.99%), Postives = 180/358 (50.28%), Query Frame = 1
Query:    1 AVMASKSISPPLVVLDDVWEREVVDVLRPMGFQLFITTHNWPVV-----EIEVGDMMEDVAVELLLKISGTVGQPGEDIQRLTMKVVAVCRQLPLVLAITGSMPVVTGKGLTAGTWEKLHNTFKDKVEKDWIRAGEISQ*SA*-------------GQFRCFVSKAAGRITQ-------------GGSIDRR*CCTGRDAASSVGDGRRS*GSCV----QVPAASCGWWVSCA*PVPRLYLNQDQGRR*DVKNRYSVADAIPSESGRHIEGLYSLIALWRLVEDLPGDAQLEAASYCASLGELEEYEGTADSASSFFVVRSLFEVQVGLF-VQPLYKRSLATREKMYGPDHRYVPSSL 966
            AV+AS   SP LVVLDDVWEREVVD L P+GF++ +TT +W VV      +++GDM E+ A+ELL K SGTVGQPG+ ++    KVVA+C  LPLVLAI GSM  V GKGLTA  WE+L  +F++  +K   R  + S                   +F      AAG +                G+ D       +    +VGDG       V    +    +    V  A  +   +L      R DV   Y        E G    GL+ L +LWR VE L GD +LE  +Y ASL ELE  + T D ASS+  V  LF+ Q      +PL++R+ A +EK+ GP+H  V  SL
Sbjct:  336 AVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRLDLGDMTEEEALELLRKTSGTVGQPGDYVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKSFENVAKKMRARGQQSSAIKVVLETSFDSLAVQKQEEFLRMSVLAAGALAPIEMLRNLWEIEDAEGTRDEAEGLVNKCLLHAVGDGGYRVHDMVLEFAKTSIRADEETVEKATALQAQFLG-----RLDVLKSYR-----DPEHGAGDRGLFFLDSLWRSVEKLSGDPELEVTTYRASLRELESCKATEDMASSYSAVGFLFDAQRKYIEAEPLHERAQAMQEKVLGPEHPGVAQSL 683          
BLAST of mRNA_H-paniculata_contig10195.152.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 175 bits (444), Expect = 8.380e-45
Identity = 133/352 (37.78%), Postives = 175/352 (49.72%), Query Frame = 1
Query:    1 AVMASKSISPPLVVLDDVWEREVVDVLRPMGFQLFITTHNWPVV-----EIEVGDMMEDVAVELLLKISGTVGQPGEDIQRLTMKVVAVCRQLPLVLAITGSMPVVTGKGLTAGTWEKLHNTFKDKVEKDWIRAGEISQ*SA*-------------GQFRCFVSKAAGRITQGGSIDRR*CCTGRDAASSVGDGRRS*GSCVQVPAASCGWWVSCA*PVPRLYLNQDQGRR*DVKNRYSVA-------DAIPS----ESGRHIEGLYSLIALWRLVEDLPGDAQLEAASYCASLGELEEYEGTADSASSFFVVRSLFEVQVGLF-VQPLYKRSLATREKMYGPDHRYVPSSL 966
            A + S   S  LVVLDDVWEREVVD   P+GF++ +TT +  VV      +E+GD+ E+ A+ELL K SG VGQPG+D++    KVVA+C  LPLVLAI GSM VV GKGLTA  WE+L    ++  +K   R  + S                   +F      AAG +     +  R      DA  +  D       C+       G+ V     V        +     VK   ++        D + S    E G   +GL+ L ALWR VE L GD  LE ASY ASL ELE  E T   A+S+  V  LF +Q      +PLY+RS A +EK+ GP+H +V +SL
Sbjct:  361 AAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEML--RNLWEIEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDL--VLEFAKTSIRAEEETVKKATALQAQYLGRLDVLESYGDPEHGTGDQGLFFLDALWRSVEKLSGDPGLEVASYRASLEELESCEATEAVATSYGSVGFLFNIQSKYAEAEPLYERSRAIQEKVLGPEHPHVATSL 708          
BLAST of mRNA_H-paniculata_contig10195.152.1 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 1.510e-44
Identity = 140/359 (39.00%), Postives = 177/359 (49.30%), Query Frame = 1
Query:    1 AVMASKSISPPLVVLDDVWEREVVDVLRPMGFQLFITTHNWPVV-----EIEVGDMMEDVAVELLLKISGTVGQPGEDIQRLTMKVVAVCRQLPLVLAITGSMPVVTGKGLTAGTWEKLHNTFKDKVEKDWIRAGEISQ*SA*-------------GQFRCFVSKAAGRIT--------------QGGSIDRR*CCTGRDAASSVGDGRRS*GSCVQVPAASCGW---WVSCA*PVPRLYLNQDQGRR*DVKNRYSVADAIPSESGRHIEGLYSLIALWRLVEDLPGDAQLEAASYCASLGELEEYEGTADSASSFFVVRSLFEVQVGLF--VQPLYKRSLATREKMYGPDHRYVPSSL 966
            A +AS   SP LVVLDDVWEREVVD   P+GF+L +TT +  +V      +E+GDM E+ A+ELL K SGTV  PG+D++    KVVA+C  LPLVLAI GSM  V GKGLTA  WE+L   F++  +K   R  + S                   +F      AAG +               +G   +     +     +  G G R     +     S       V  A  +   YL      R DV   Y        E G   +G++ L ALWR VE L GD QLE ASY ASLG LE  E T  +A S+F V  LF VQ G +   + LYKRSLAT+EK+ G +H  V  SL
Sbjct:  163 AAVASTRNSPRLVVLDDVWEREVVDAFVPLGFKLLLTTRDRSIVCDPAGRLELGDMTEEEALELLRKTSGTV-DPGDDVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKEFENVAKKMRARGQQSSSIKVVLETTFDSLATRKQKEFLMMAVLAAGALAPIEMLSNLWEIEDAEGTHAEAEGLVSKYLLHAVGGGGYRMHDLVLDFAKTSIRAEEETVKRATALQAQYLG-----RLDVVESYG-----DPEHGAGDQGIFFLDALWRSVEKLSGDPQLEVASYRASLGALEWGEATEAAARSYFSVGFLFNVQ-GKYDDAESLYKRSLATQEKVLGQEHPDVAQSL 509          
BLAST of mRNA_H-paniculata_contig10195.152.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 1.300e-40
Identity = 122/345 (35.36%), Postives = 169/345 (48.99%), Query Frame = 1
Query:    7 MASKSISPPLVVLDDVWEREVVDVLRPMGFQLFITTHNWPVVEI-----EVGDMMEDVAVELLLKISGTVGQPGEDIQRLTMKVVAVCRQLPLVLAITGSMPVVTGKGLTAGTWEKLHNTFKDKVEKDWIRAGEISQ*SA*GQ-------FRCFVSKAAGRITQGGSIDRR*CCTG----RDAASSVGDGRRS*GSCVQVPAASCGWWV-SCA*PVPRLYLNQDQGRR*DVK-------NRYSVADAIPS-ESGRHIEGLYSLIALWRLVEDLPGDAQLEAASYCASLGELEEYEGTADSASSFFVVRSLFEVQVGLFVQPLYKRSLATREKMYGPDHRYVPSSL 966
            +AS   SP LVVLDDVWEREVVD L P+GF++ +TT +  VV +     E+GDM E+ A+ELLLK SGTVG+PG+ ++ +  KVV +C +LPLVLAI GS+PVV GKGLTAG W KL +  ++ V K      + +  +   +       FR   +     +   G++             D   +  D       C+       G+ V        ++ +  D      +         R +V  +    E G   +GL+ L ALWR VE L GD +LE  SY  SL  LE  E T   ASS+  V  LF +Q             A +E++ GP+H  V  SL
Sbjct:  257 VASTGTSPRLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTRCLELGDMTEEEALELLLKTSGTVGRPGDSVRTVMTKVVTLCGRLPLVLAIAGSLPVVKGKGLTAGAWGKLIDELENVVTKMEASLEDSNSLNVVLETSFDALTFRKKQAFKKTAVLAPGAVASTEMLLNLWETEDTGGTREDAEGLVSKCLLQDVGGGGYRVHDLVLDFVKIKIKADMEMAKKIAALQAQFLGRLNVLKSYEHPEHGAGNQGLFVLDALWRSVEQLSGDPKLEVPSYSTSLAALESCEATTVVASSYSSVGFLFSIQ-------------AIQEQILGPEHLDVAMSL 588          
BLAST of mRNA_H-paniculata_contig10195.152.1 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI)

HSP 1 Score: 161 bits (407), Expect = 6.000e-40
Identity = 128/353 (36.26%), Postives = 177/353 (50.14%), Query Frame = 1
Query:    1 AVMASKSISPPLVVLDDVWEREVVDVLRPMGFQLFITTHNWPVVEI-----EVGDMMEDVAVELLLKISGTVGQPGEDIQRLTMKVVAVCRQLPLVLAITGSMPVVTGKGLTAGTWEKLHNTFKDKVEKDWIRAGEISQ*SA*GQFRCFVSKAAGR--------ITQGGSIDR----R*CCTGRDAASSVGDGRRS*GSCVQVPAASCGWWV-SCA*PVPRLYLNQDQGRR*DVKNRYSVA-------DAIPS----ESGRHIEGLYSLIALWRLVEDLPGDAQLEAASYCASLGELEEYEGTADSASSFFVVRSLFEVQVGLFVQ--PLYKRSLATREKMYGPDHRYVPSSL 966
            A + S+  SP LVVLDDVWEREVV     +G ++ +TT +  +V +     E+GDM ED A+ELL K SGTVGQPG+ ++    KVV  C +LPLVLAI GSMPVV GKGL  G WE+L   F++     W   GE S+         F + AA +        +   G++      R     +D   +  +       C+       G+ V        R+ + QD  R   VK   ++        D + S    + G   +GL+ L  LWR +E L GD  LE ASY A LGEL+  E TA+ A+    V  L+++Q G F +  PLY+RS    EK+ G +H  V  +L
Sbjct:  355 AAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVPGGLLELGDMAEDEALELLWKTSGTVGQPGDGVRTQMTKVVDRCGRLPLVLAIAGSMPVVKGKGLKDGAWEELIEEFENVTTIMW-EPGEESRNLDMVLGASFNALAARKREEFLRMAVLAPGAVAPFEMLRNLWEIQDVEGTKEEAEGLVNKCLLQDVDGVGYRVHDLLLKYLRVKIKQDGER---VKKATALQAQYLGRLDVVMSYGDQKHGADNQGLFGLGTLWRCLEKLSGDPVLETASYRAILGELDSCEATAEVANCLEWVALLYDIQ-GKFAEAEPLYERSQTILEKVLGSEHSDVAKAL 702          
BLAST of mRNA_H-paniculata_contig10195.152.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 3.520e-35
Identity = 126/378 (33.33%), Postives = 171/378 (45.24%), Query Frame = 1
Query:    1 AVMASKSISPPLVVLDDVWEREVVDVLRPMGFQLFITTHNWPVV-----EIEVGDMMEDVAVELLLKISGTVGQPGEDIQRLTMKVVAVCRQLPLVLAITGSMPVVTGKGLTAGTWEKLHNTFKDKVEKDWIRAGEISQ*SA*-------------GQFRCFVSKAAGRITQGGSIDR---------------------------R*CCTGRDAASSVGDGRRS*GSCVQVPAASCGWWVS---CA*PVPRLYLNQDQGRR*DVKNRYSVA--DAIPS----ESGRHIEGLYSLIALWRLVEDLPGDAQLEAASYCASLGELEEYEGTADSASSFFVVRSLFEVQVGLFVQ--PLYKRSLATREKMYGPDHRYVPSSL 966
            A +AS    P LVVLDDVWEREVVD   P+GF++ +TT +  VV      +EVGDM E+ A+ELL K SG VGQPG+D++    KVVA+C  LPLVLAI GSM VV GKGLTA  W++L    ++  +K   R  + S  +A               +F      AA                                      R      DA  +  +       C+       G+ V          R+  + +  R+      + +   D + S    E G   + L+ L ALWR VE L GD +LE A        LE  E T   A S++ V  LF +Q G + +  PLY+RS A +E + GP+H  V +SL
Sbjct:  324 AAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARGEQSSSINAVLETSFDSLAVRKQEEFLKLAVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPIEMLRNLWEIEDAEGTRDEAEGLVSKCLLHAVGGGGYRVHDLVLEYAKTRIRADAEMVRKVTALQAHFLGRLDVLKSYRDPEHGAGNQSLFFLDALWRSVEKLSGDPELEVA--------LESCEATEAVARSYWSVGFLFNIQ-GKYAEAEPLYERSQAIQENVLGPEHPDVGTSL 692          
BLAST of mRNA_H-paniculata_contig10195.152.1 vs. uniprot
Match: A0A6H5JLW6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLW6_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 3.460e-18
Identity = 110/383 (28.72%), Postives = 152/383 (39.69%), Query Frame = 1
Query:    7 MASKSISPPLVVLDDVWEREVVDVLRPMGFQLFITTHNWPVVEI-----EVGDMMEDVAVELLLKISGTVGQPGEDIQRLTMKVVAVCRQLPLVLAITGSMPVVTGKGLTAGTWEKLHNTFKDKVEKDWIRA-----GEISQ*S-------A*GQFRCFVSKAAGRITQ------------GGSIDRR*CCTGRDAASSVGDGRRS*GSCVQVPAASCGWWVSCA*PVPRLYLNQDQGR----R*DVKNRYSVADAIPSESGRHIEGLYSLIALWRLVEDLPGDAQLEAASYCASLGELEEYEGTADSASSFFVVRSLFEVQV----------------------------GLFV--QPLYKRSLATREKMYGPDHRYVPSSL 966
            + S   SP LVVLDDV EREVV+ L P+G +L +TT +  VV +     EVGDM E+ A+ELL+  SG V     D              LPL +A+ G+M           TW KLH     K E  +        G + + S       A  +FR     A G +              G S+        +    +V    R     +    +       C   + R+ L   +      R  V   Y+ AD +         GL++L+ LW  VE+L  D  L+   Y   L ELE  E TAD+A S+  V +LF +QV                            G +   +PL +RS A REK+ GP+H  V  SL
Sbjct:   79 VVSTGTSPRLVVLDDVLEREVVEALLPLGLKLVVTTRDRSVVGVPGGCLEVGDMTEEEALELLMLASGAVSSRIAD--------------LPLAMAVIGAMDESRESPHRPDTWTKLHEKLSAKPEFVYEEGLDNGLGNVLELSFSALDADAKERFRRLGVLAGGALAPMEMLSYLWDQGPGNSLLFVGQLVDKSLVQAVEHKYRLHDLVLAFVKSKL-----CCLKMERVVLVTSRLAQYLSRLSVLQEYAEADEMQG-------GLFALMGLWGSVEELSRDNTLQTTMYGKILSELEACEATADTAISYGAVGNLFFLQVRATRNFLLVSSVSSSRAVPSQTPLLAVRGKYADAEPLCERSPAIREKVLGPEHPDVAQSL 435          
BLAST of mRNA_H-paniculata_contig10195.152.1 vs. uniprot
Match: A0A6H5JY23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY23_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.030e-15
Identity = 48/96 (50.00%), Postives = 61/96 (63.54%), Query Frame = 1
Query:  685 ESGRHIEGLYSLIALWRLVEDLPGDAQLEAASYCASLGELEEYEGTADSASSFFVVRSLFEVQVGLFVQ--PLYKRSLATREKMYGPDHRYVPSSL 966
            E G   +GL+ L ALWR VE L GD++LE ASY  SLGELE  + T D ASS+  V  LF +Q G + Q  PLY++S A +EK  G +H  V +SL
Sbjct:   26 EHGADNQGLFVLDALWRSVEKLSGDSELEVASYSTSLGELESCKATTDVASSYSFVGFLFNIQ-GEYTQAEPLYEKSQAIQEKFLGQEHSDVATSL 120          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig10195.152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A6H5LJA6_9PHAE1.050e-4939.20NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G722_ECTSI1.550e-4839.38NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D8LGG5_ECTSI3.680e-4737.99NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7G720_ECTSI8.380e-4537.78NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
D7FUD7_ECTSI1.510e-4439.00NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
A0A6H5KU94_9PHAE1.300e-4035.36NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LPV9_ECTSI6.000e-4036.26NB-ARC and TPR repeat-containig protein n=1 Tax=Ec... [more]
A0A6H5KXS7_9PHAE3.520e-3533.33NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JLW6_9PHAE3.460e-1828.72NB-ARC domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JY23_9PHAE1.030e-1550.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig10195contigH-paniculata_contig10195:173..4924 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score135.6
Seed ortholog evalue1.7e-29
Seed eggNOG ortholog2880.D8LGG5
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759,KOG4658@1,KOG4658@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Exons6
Model size1109
Cds size399
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig10195.152.1prot_H-paniculata_contig10195.152.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig10195 179..1297 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928725.0141299-UTR-H-paniculata_contig10195:172..1781622928725.0141299-UTR-H-paniculata_contig10195:172..178Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10195 173..178 +
1691480595.8363066-UTR-H-paniculata_contig10195:172..1781691480595.8363066-UTR-H-paniculata_contig10195:172..178Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10195 173..178 +
1622928725.0568428-UTR-H-paniculata_contig10195:1297..14201622928725.0568428-UTR-H-paniculata_contig10195:1297..1420Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10195 1298..1420 +
1691480595.8775203-UTR-H-paniculata_contig10195:1297..14201691480595.8775203-UTR-H-paniculata_contig10195:1297..1420Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10195 1298..1420 +
1622928725.0667827-UTR-H-paniculata_contig10195:2349..27121622928725.0667827-UTR-H-paniculata_contig10195:2349..2712Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10195 2350..2712 +
1691480595.890461-UTR-H-paniculata_contig10195:2349..27121691480595.890461-UTR-H-paniculata_contig10195:2349..2712Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10195 2350..2712 +
1622928725.0967069-UTR-H-paniculata_contig10195:3888..39921622928725.0967069-UTR-H-paniculata_contig10195:3888..3992Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10195 3889..3992 +
1691480595.897991-UTR-H-paniculata_contig10195:3888..39921691480595.897991-UTR-H-paniculata_contig10195:3888..3992Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10195 3889..3992 +
1622928725.1337557-UTR-H-paniculata_contig10195:4810..49241622928725.1337557-UTR-H-paniculata_contig10195:4810..4924Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10195 4811..4924 +
1691480595.905015-UTR-H-paniculata_contig10195:4810..49241691480595.905015-UTR-H-paniculata_contig10195:4810..4924Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig10195 4811..4924 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928725.026089-CDS-H-paniculata_contig10195:178..3071622928725.026089-CDS-H-paniculata_contig10195:178..307Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10195 179..307 +
1691480595.8482645-CDS-H-paniculata_contig10195:178..3071691480595.8482645-CDS-H-paniculata_contig10195:178..307Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10195 179..307 +
1622928725.035987-CDS-H-paniculata_contig10195:746..8511622928725.035987-CDS-H-paniculata_contig10195:746..851Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10195 747..851 +
1691480595.8583105-CDS-H-paniculata_contig10195:746..8511691480595.8583105-CDS-H-paniculata_contig10195:746..851Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10195 747..851 +
1622928725.0474877-CDS-H-paniculata_contig10195:1132..12971622928725.0474877-CDS-H-paniculata_contig10195:1132..1297Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10195 1133..1297 +
1691480595.8678682-CDS-H-paniculata_contig10195:1132..12971691480595.8678682-CDS-H-paniculata_contig10195:1132..1297Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig10195 1133..1297 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig10195.152.1

>prot_H-paniculata_contig10195.152.1 ID=prot_H-paniculata_contig10195.152.1|Name=mRNA_H-paniculata_contig10195.152.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=133bp
MASKSISPPLVVLDDVWEREVVDVLRPMGFQLFITTHNWPVVEIEVGDMM
EDVAVELLLKISGTVGQPGEDIQRLTMKVVAVCRQLPLVLAITGSMPVVT
GKGLTAGTWEKLHNTFKDKVEKDWIRAGEISQ*
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mRNA from alignment at H-paniculata_contig10195:173..4924+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig10195.152.1 ID=mRNA_H-paniculata_contig10195.152.1|Name=mRNA_H-paniculata_contig10195.152.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4752bp|location=Sequence derived from alignment at H-paniculata_contig10195:173..4924+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCTGTAATGGCCAGTAAGAGTATCTCGCCGCCGCTGGTGGTGTTGGACGA TGTCTGGGAGCGAGAAGTGGTGGACGTCCTTCGACCAATGGGATTTCAGC TATTCATCACCACGCACAATTGGCCGGTGGTGGAGGTTTGAGAAGGACGC ATCTGTTACGAGCCGAAAGGAGCATGATATACTGCAGCCGTGAGCCGAGT TCAGTATGGCGTAGTGAAGTCATGCGTCGAATGGAGAATGACCGAGGGAG TTGTAACAGTCGTTCGACTAGGGAGCTTGACCCGCAGGCTTTCAGAAGAG AAGAGACCGAAGCAAGAGAAACTGATAATATATTAATTGAAGTGCATCAT GTGCTGAGCGTTACTGATGTCCCGTGCAACGATTGACCGTCGCATCCCAA AACCACCCCTGCCAATGTCTGTACCATTAGGATTCGTGTGATCTCATGCA TAGCTTGTTAATCGAACGGAGGGCTGCTTGAAACAATGAGTATGTAGGTC TTGGGCAATGGTAGGTGATGCCAGTAGCGGGAGGCCACCCTGTGGGCTTT ACGTATTCCATTCTCCCATAACAGATCGAAGTTGGTGATATGATGGAGGA CGTGGCCGTGGAGCTTCTACTGAAGATAAGTGGGACCGTTGGCCAGCCTG GGGAAGATATCCAGAGGTTAACGATGAAGGTGACCACAGTGACCCTGTAG CCTAGGTCACAATGTTGAGCGTAGTTCCGACCGGTTGTCGCCAATGGCCG GACATGGTCAGCAAATTGAAGGAATATACGTCGAAGTGTTCATTGTAAAG TCAACCAACACAAACGGAGGTTGCCTGTTGGGGGTGGTGATCGTTTTTAC AGTTAGACGAATAACTCAAGTTATTCGTACCCAGTGGTGTTATGATGTGT ACGCTTCGCATACATCGCAGCGGTCACACTGCGGGAACTCGCTGCTGCTG ATCTATCTAGGTTGTTGCAGTCTGCAGACAACTGCCCTTAGTCCTCGCCA TTACAGGTTCCATGCCTGTCGTAACGGGGAAGGGCTTAACCGCCGGCACC TGGGAAAAGCTGCACAACACCTTCAAAGACAAGGTCGAGAAGGATTGGAT AAGGGCAGGGGAGATCTCTCAATGAAGTGCTTGAGGCCAATTTCGGTGCT TTGTCAGCAAGGCAGCAGGACGAATTACTCAAGGTGGCAGTATTGACCGC AGGTGATGTTGCACCGGTCGCGACGCTGCTAGTTCCGTGGGAGATGGAGT TTCGATTCTGCAGCATGATGCTGCTGGTAGAGTTCCATTCGTCTTCGACT ATTCGAGCATAACGATTATACTGTTCCTATTTGCCAAGACTGTGTTGTTT CCAGCGATGGGTGTAGACACGTCGCCGTCTGCCATCAGTGTGCGCACAAT CGAAATCTTCGTTGGCGCTTGCATGCGTGTCCTCAAGATTTTTGTGTGGG TTGTGTTGACCAACGAAGGTTGTCCATCAGGCGTAGTGAAGAATACGATG GGAAAAGACGAAGGTATATGGTTCTACATGTATAGTTTAGCTATCACTTC GTATTCACTAAAACATGACCAGCCTAAACGCTGTTATGCCAACGACTAGT TCCAGTTCCATATTCGTGCCGTCAGTGCGATATTCCACCCTACTCTTCGT GCGCAGGACGACGCCCATGATGTACCAAGCAAATTGAGACCCATGTATTG ACACTCTGTATCAGGAATCAGTAATGGTTACGAAATTGACCAGGTGCAGG ATATTTTTTGTATGATGACTTATGGTTGGTCTAAGGAACTTGACCGTGAA TACCGAACGTTGTGTGGAATTTTCTTCGCGACGATGCTACACCCATGTTG ATTAATGCATGGGAGTGAAAGCCACGTTAAGTGTAGCAGCGGCCACGGCA GAATTCGTTCAGATCCATGTGTGCTGAACATTGATAGTGGATTGGAAGAT TCGCCAACTGCATCGGCACATACGTGATGGAACAATATGAATGGTATGAC ACAAGACTCGGATCCGCAGCTGACAGTAGTTGTACGAAAGACTTAAACTG CCTCGTACGACAAACACGCGAACGTACAGAGTCTCACGAGGTCGGTCCTT GCTGGTTTGTATATTCTATGCTGCTATCTCTCTTCCCCCCCCATGATTCC TCTTTCCTAGGACGAGGTCGACACGAGAGACGAAGCTAAGGATCTTGTGT ACAGGTGCCTGCTGCAAGTTGTGGGTGGTGGGTATCGTGTGCATAACCTG TTCCTAGACTTTATTTGAATCAAGATCAAGGGAGACGCTAAGATGTTAAA AATCGCTACAGTGTGGCAGACGCAATACCCAGCGAGAGTGGACGTCATAT TGAAGGCTTGTACTCTTTGATTGCCTTGTGGCGCTTGGTGGAGGATCTCC CAGGAGACGCTCAGTTGGAGGCTGCGTCGTACTGTGCGAGCCTCGGGGAG TTGGAGGAATACGAAGGGACTGCAGACTCGGCGTCTTCATTTTTCGTTGT TCGAAGTTTGTTCGAGGTTCAGGTGGGCCTATTCGTACAAGTGTACATAC GATGTTTTTGTTTCTTCTGTTCGACTATGCGGGAGTAAACTTCTTGTGGA TATGTGCGTTCGCTAAAAAATAGAGGGGATCCAATGACACGCCCATCATC ATCCCGAAGGGCCGAAGGAGAAATGTTACGAGGCTTGTTCCTTGTTCCAA CACGCGCCGGTGATGAGTGAGAATTTTTGCTGTCCAAATCACCCCGCAGT AGGTAAGAGTGCGAACTACGGAGCTTGATTGTTCAAGGAACAGCTAAACG TTGCGGCAATCTTCGTCGAGACTATCGTGTAGTTTTAGGTTCACGCGCAC TCGAAAGGGGTTATCAACGGCATCGATGTAGCCCCAGCTATTGCATCAAG AGGCTAGTCGTCTAGATACATAACAGCAGAAAGCCCGTCGAGTACGAAGG CCCAGGCATCAAGTATGGTGAGTTCTGCTTAAACCGACGACTACCTGATT CCGGAAGCTACCGTACCGTACTGGTTTATTCCGAAATACCAAAAATCCGC CAAATTATGCCCCCAATCACCAGCAGACCACCACGTCCATGTTAGTATCG CAAGTTTATTTTGTTTGATTCCCGTGTGTTTCTCAAGTTCGGGCCTATTG CTGTGGCAAGACTACAGGGTACTCTAGAGTCCCTGGCACACCTGCCCGCC GTCCACGGCTTGCGCCAATTCCGCCGTTGGCCACCTGATCTCGTTGGGTA GCCCTTGGCCATCATCCAATGTCCCAGCTCAGCATTGGCGCTATCTCCAT CTCTGGGTCGAACAGAACGATGTACGATCGCCAGCAGCTTCTTACGGAAA CTTTGCTGCTCAATGCTAAACAGCCAAGAGGGGTTGTTAACCAGGCACGT GAGAAGGGTGTTATTGTGTGAACTTCTTGTGACACGTGTGGTAAAGGAAG AAAATTGAGAAGTCAGATAAATTATTCTATGAATTATACTCCGTATGTCT GTTTCTCGGGTCAGAAGACGGTGGCTGGTCCATTATTCAAACCACCCATG AGCGTTATTGAAGGAGCGATTGACCCGATTCAACGAAGGGTAGAGCTGTT GAGCATTGCTGTCCTATCTTGCCTTTTAAGGGGCTTTTTTGTCGCCTCTT TAGTATTGGCACATACGCATGTTTTTGCTCGTTCAAGAATGATAAGAATG GTATGTGGAAACGGAGCCCCTGTACAAGCGGAGTTTGGCCACCCGCGAAA AGATGTATGGCCCAGATCACCGCTATGTGCCCTCATCACTCTTCACGTGG CAGTCTTGCTTCGTCTACAGGTCAGGACGGAAGACGCTTGGTACAATTTC GTTCGTCGACGACAGACGCGGCCCACTTGGCAGCTAACAGGGGTCAGCAG AGATGTTGCGCCATTTGATTCACACGCAGGCGAAATTGATATTTCCTTCT CACGGCGCCAGACGCTGAAAACAAACGAGAAAGGCATGTGGCAGTCCCGC CGTAAAAGGGAGGGGGGATTTTTTCATGAAGGGGGAGTATGGTAGCGGAA TGTACACGAAACACATGAGGCGAGGCCAATCATACACGTTTGTTCCTGCT TCGCCGGTGATGAAAATTTTGTATTTTCCCCTTCGCTAGTCAAGTTGTTT TGGGGTCACAAAATCTCTACCGCACCCCTCGGGCGCTTGAGGGGGGTCAA TCAAACGCGCAGGCTTGGTCGAATCATTTTGGGGTCCTGTATTTTTTCGG GCAAAGTCCTTTTCGGCTGACTATGTTTTGTGAGTGTAACAGAAACGTAG TAACAGCAGCCGGGACGAAAGCGATGACAGCGAATATTATGTCCGAGTAT TCTGCCATAATGGCTGCGGCCGATGCTTGCAACGACAAAGCCAGTTGATG ATTGGATCCTCGGTCTGGTCACCCGCTCAACTGCATCGACCAGTACGTTA CTCGAACGGGCTCTGGGCGTTGGAGAGAACGTGTACCGCCGTGCCCACCC GGAAATGGCGACTGACCTGATTCAACAAAGGGTAGAGTTGTTGAGCATTG TTTTGCATTGTTACCTTGTATTTTCTTCAAACGGGCTTCTTGTCTCGCCC CTTTTGTATGGGCATATGTCCACATTGTGCTCATTCAGGGAAGGTATGCG GAAGCGCAGCCGTTGTGCCAACGAGGGCTGGACATCGACGAAAAGGTGCA CGGCCTAGATCACCCTTCCGTGGCCTCGTCACTCTGTGAACTGGCGACGT TG
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Coding sequence (CDS) from alignment at H-paniculata_contig10195:173..4924+

>mRNA_H-paniculata_contig10195.152.1 ID=mRNA_H-paniculata_contig10195.152.1|Name=mRNA_H-paniculata_contig10195.152.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=798bp|location=Sequence derived from alignment at H-paniculata_contig10195:173..4924+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCCAGTAAGAGTATCTCGCCGCCGCTGGTGGTGTTGGACGATGTCTG
GGAGCGAGAAGTGGTGGACGTCCTTCGACCAATGGGATTTCAGCTATTCA
TCACCACGCACAATTGGCCGGTGGTGGAGATGGCCAGTAAGAGTATCTCG
CCGCCGCTGGTGGTGTTGGACGATGTCTGGGAGCGAGAAGTGGTGGACGT
CCTTCGACCAATGGGATTTCAGCTATTCATCACCACGCACAATTGGCCGG
TGGTGGAGATCGAAGTTGGTGATATGATGGAGGACGTGGCCGTGGAGCTT
CTACTGAAGATAAGTGGGACCGTTGGCCAGCCTGGGGAAGATATCCAGAG
GTTAACGATGAAGATCGAAGTTGGTGATATGATGGAGGACGTGGCCGTGG
AGCTTCTACTGAAGATAAGTGGGACCGTTGGCCAGCCTGGGGAAGATATC
CAGAGGTTAACGATGAAGGTTGTTGCAGTCTGCAGACAACTGCCCTTAGT
CCTCGCCATTACAGGTTCCATGCCTGTCGTAACGGGGAAGGGCTTAACCG
CCGGCACCTGGGAAAAGCTGCACAACACCTTCAAAGACAAGGTCGAGAAG
GATTGGATAAGGGCAGGGGAGATCTCTCAATGAGTTGTTGCAGTCTGCAG
ACAACTGCCCTTAGTCCTCGCCATTACAGGTTCCATGCCTGTCGTAACGG
GGAAGGGCTTAACCGCCGGCACCTGGGAAAAGCTGCACAACACCTTCAAA
GACAAGGTCGAGAAGGATTGGATAAGGGCAGGGGAGATCTCTCAATGA
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