mRNA_H-paniculata_contig1016.133.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig1016.133.1 vs. uniprot
Match: UPI001E1CA6F9 (LOW QUALITY PROTEIN: uncharacterized protein LOC109774810 n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=UPI001E1CA6F9) HSP 1 Score: 79.0 bits (193), Expect = 2.160e-15 Identity = 38/73 (52.05%), Postives = 50/73 (68.49%), Query Frame = 1 Query: 7 TTLFKDNKSAINLSTGSGVHCRTKYIEVRWHGVREWVRDGILALKYVQTGDQLADVLTKGVSRIKFQRRRNYL 225 T L DNKSAI L H RTK+IE R+H +RE V+DG +A+ Y+ TG+QLAD++TK + R+KFQ R L Sbjct: 1352 TPLLIDNKSAIQLCKNPVFHDRTKHIETRFHFIRECVQDGRIAVDYIHTGEQLADIMTKALPRVKFQELREKL 1424
BLAST of mRNA_H-paniculata_contig1016.133.1 vs. uniprot
Match: A0A453SJJ3_AEGTS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453SJJ3_AEGTS) HSP 1 Score: 77.4 bits (189), Expect = 4.230e-15 Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 1 Query: 7 TTLFKDNKSAINLSTGSGVHCRTKYIEVRWHGVREWVRDGILALKYVQTGDQLADVLTKGVSRIKFQRRRNYL 225 T L DNKSAI L H RTK+IE R+H +RE V+DG + + Y+ TG+QLAD++TK + R+KFQ R L Sbjct: 251 TPLLIDNKSAIQLCKNPVFHDRTKHIETRFHFIRECVQDGRIVVDYIHTGEQLADIMTKALPRVKFQELREKL 323
BLAST of mRNA_H-paniculata_contig1016.133.1 vs. uniprot
Match: A0A7H4LDI7_WHEAT (Genome assembly, chromosome: II n=2 Tax=Triticinae TaxID=1648030 RepID=A0A7H4LDI7_WHEAT) HSP 1 Score: 76.3 bits (186), Expect = 1.910e-14 Identity = 35/72 (48.61%), Postives = 52/72 (72.22%), Query Frame = 1 Query: 1 GSTTLFKDNKSAINLSTGSGVHCRTKYIEVRWHGVREWVRDGILALKYVQTGDQLADVLTKGVSRIKFQRRR 216 G+TT+F DNKSAI L H R+K+I+VR+H +R+ V +G + +K++ TGDQLAD+ TK + R +FQ+ R Sbjct: 1216 GATTIFIDNKSAIQLCKNPVCHDRSKHIDVRFHFIRKCVEEGKIRVKHIATGDQLADIFTKSLGRTRFQQLR 1287
BLAST of mRNA_H-paniculata_contig1016.133.1 vs. uniprot
Match: A0A4Y9YHS6_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Dentipellis fragilis TaxID=205917 RepID=A0A4Y9YHS6_9AGAM) HSP 1 Score: 73.6 bits (179), Expect = 1.700e-13 Identity = 36/69 (52.17%), Postives = 49/69 (71.01%), Query Frame = 1 Query: 1 GSTTLFKDNKSAINLSTGSGVHCRTKYIEVRWHGVREWVRDGILALKYVQTGDQLADVLTKGVSRIKFQ 207 G T L DN+SA+ ++ H RTK+I+VR H +RE V +GIL L+YV TG+Q+ADVLTKG+ R K + Sbjct: 1348 GPTILLMDNQSAMAIARNPAFHARTKHIDVRHHFLREKVEEGILDLEYVPTGEQVADVLTKGLPREKHE 1416
BLAST of mRNA_H-paniculata_contig1016.133.1 vs. uniprot
Match: UPI001ABC3E10 (secreted RxLR effector protein 161-like n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=UPI001ABC3E10) HSP 1 Score: 72.0 bits (175), Expect = 1.840e-13 Identity = 34/68 (50.00%), Postives = 50/68 (73.53%), Query Frame = 1 Query: 13 LFKDNKSAINLSTGSGVHCRTKYIEVRWHGVREWVRDGILALKYVQTGDQLADVLTKGVSRIKFQRRR 216 L DNKSAI++S H R+K+IE+ +H +RE V +G + +++VQ+GDQLADVLTK + R+K Q +R Sbjct: 165 LNVDNKSAISVSKNPVYHDRSKHIEIWYHFIRECVENGKIQIEFVQSGDQLADVLTKALGRVKLQEQR 232
BLAST of mRNA_H-paniculata_contig1016.133.1 vs. uniprot
Match: UPI001E1BA65C (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BA65C) HSP 1 Score: 71.2 bits (173), Expect = 2.030e-13 Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = 1 Query: 13 LFKDNKSAINLSTGSGVHCRTKYIEVRWHGVREWVRDGILALKYVQTGDQLADVLTKGVSRIKFQRRRNYL 225 LF DN+SAI + +H RTK+I+VR+H +RE G++ KYV T +QLAD+LTK ++ +FQR R L Sbjct: 130 LFMDNQSAIRIIRNPELHQRTKHIDVRYHFIRELQEQGVIDAKYVNTNEQLADILTKPLAAPRFQRLRQEL 200
BLAST of mRNA_H-paniculata_contig1016.133.1 vs. uniprot
Match: UPI0020182CB6 (uncharacterized mitochondrial protein AtMg00810-like n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=UPI0020182CB6) HSP 1 Score: 72.8 bits (177), Expect = 2.050e-13 Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 1 Query: 4 STTLFKDNKSAINLSTGSGVHCRTKYIEVRWHGVREWVRDGILALKYVQTGDQLADVLTKGVSRIKFQRRRNYL 225 ST LF DN SAI+L+ + H RTK++EV +H +RE V G + ++Y +TGDQ+AD+ TKG+ KF R L Sbjct: 241 STILFCDNLSAISLAENTVFHARTKHVEVHYHFLREKVLQGEIKMEYTKTGDQVADIFTKGLGAAKFDEFRTQL 314
BLAST of mRNA_H-paniculata_contig1016.133.1 vs. uniprot
Match: A0A409WC63_9AGAR (Uncharacterized protein n=2 Tax=Panaeolus cyanescens TaxID=181874 RepID=A0A409WC63_9AGAR) HSP 1 Score: 72.8 bits (177), Expect = 3.160e-13 Identity = 34/72 (47.22%), Postives = 50/72 (69.44%), Query Frame = 1 Query: 10 TLFKDNKSAINLSTGSGVHCRTKYIEVRWHGVREWVRDGILALKYVQTGDQLADVLTKGVSRIKFQRRRNYL 225 TL+ DN+ AI LS H RTK+I+V++H R+ +R GI+ L+YVQT DQ+AD+ TK + R+K ++ R L Sbjct: 1196 TLWCDNQGAIQLSNNPVFHMRTKHIDVQFHYTRQVIRRGIVKLEYVQTEDQVADIFTKALGRVKLEKFRGML 1267
BLAST of mRNA_H-paniculata_contig1016.133.1 vs. uniprot
Match: UPI001E1CA5CE (uncharacterized protein LOC120969904 n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=UPI001E1CA5CE) HSP 1 Score: 72.8 bits (177), Expect = 3.170e-13 Identity = 35/64 (54.69%), Postives = 46/64 (71.88%), Query Frame = 1 Query: 13 LFKDNKSAINLSTGSGVHCRTKYIEVRWHGVREWVRDGILALKYVQTGDQLADVLTKGVSRIKF 204 L DNKSAI+LS H R+K+IE+R+H +RE V +G + + YV T DQLADVLTK + R+KF Sbjct: 1292 LLVDNKSAISLSKNPVFHDRSKHIEIRYHFIRECVEEGRIDINYVCTNDQLADVLTKALGRLKF 1355
BLAST of mRNA_H-paniculata_contig1016.133.1 vs. uniprot
Match: A0A4Y2H1X2_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2H1X2_ARAVE) HSP 1 Score: 72.0 bits (175), Expect = 4.630e-13 Identity = 34/72 (47.22%), Postives = 50/72 (69.44%), Query Frame = 1 Query: 10 TLFKDNKSAINLSTGSGVHCRTKYIEVRWHGVREWVRDGILALKYVQTGDQLADVLTKGVSRIKFQRRRNYL 225 TLF DN+SAI L H RTK+I+VR+H +RE DG + +KYV++ +QLAD+ TK + ++KF++ R L Sbjct: 279 TLFVDNQSAIKLIKNPVFHKRTKHIDVRYHFIREKCDDGSVNIKYVKSEEQLADIFTKALPKVKFEKLRELL 350 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1016.133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1016.133.1 >prot_H-paniculata_contig1016.133.1 ID=prot_H-paniculata_contig1016.133.1|Name=mRNA_H-paniculata_contig1016.133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp GSTTLFKDNKSAINLSTGSGVHCRTKYIEVRWHGVREWVRDGILALKYVQback to top mRNA from alignment at H-paniculata_contig1016:18774..19004+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1016.133.1 ID=mRNA_H-paniculata_contig1016.133.1|Name=mRNA_H-paniculata_contig1016.133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=231bp|location=Sequence derived from alignment at H-paniculata_contig1016:18774..19004+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1016:18774..19004+ >mRNA_H-paniculata_contig1016.133.1 ID=mRNA_H-paniculata_contig1016.133.1|Name=mRNA_H-paniculata_contig1016.133.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=462bp|location=Sequence derived from alignment at H-paniculata_contig1016:18774..19004+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |